HG10002183 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002183
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Formamidopyrimidine-DNA glycosylase isoform X2
Location	Chr11: 4256222 .. 4260802 (-)
RNA-Seq Expression	HG10002183
Synteny	HG10002183

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGAGCTACCGGAGGTGGAGGCGGCGAGGAGAGCAATAGAAGAGCATTGCGTTGGGAAAGTGATTAAGAAGGCGGTGATAGCCGACGATACGAAGGTCATCGACGGCGTATCGCCTTCCGATTTCGAGAATTCCATCTTAGGCAAAACCATTCTCTCTGCCCATCGTAAGGGCAAGCACCTGTGGCTCCGCCTCGATTCTCCTCCTTTCCCTGCATTTCACTTCGGTACGATTCCCTCCTAATTTCCTTTATTTTCTTTGAAGTGCATGTGGTTTTTCTTTTTAGTCACGTTTGGTATTCTGCTATTGAAAATGGGTTGTCTTTCCTTATTTCTCTTGGAACCATTTGTTGATTCGGGTGAAAATTTAGTGAAACTTGGATTTTGCTGGTTTCATGTGAAAAATGGAAAGGGAAGTTATGAAATTCAAGGTGTATTTGGAAGTATGTGAGTGTGAATAGTTGCTTCAACTATTTATATTCTAGAGTTCTTGTTATTGGTGCTTCTAGTTCTAGATTCCAAATTTATAATGCGATTGCCTCTACTTTGTTCTATTTGTGTGTTGGAAGCACTAATTTTGTCCCCAATTGAAGTCGGTTGCTTGCACACACTTCTGCCGTACTAAAGTATTTAGATCGTTAGCTAACAAAGCTTTTTTGTTTATGGTGATCAAGGCTGACCTTAGGTTGCATTCTCTTATATTTCCCTTGTTGTTTGAGACATTCTCTTCCTAACTTTTTTATAACACTCACTCTTTTACCACTTTAGACTTCCTTTAATCTCATTCATGTTCATGTTGATTTGCTTCAGGGATGGCGGGTGCCATATATATTAAAGGTGTAGCTGTCACAAACTATAAAAGGTCAGACGTGATTAGACCAAATTTATGGTTTAGGCAGTGTGCAATTACGCCTAAAATCTTATGCTTAGTTCTTTTAGGTTCTTGCGTTGGCACTTGTGTAAACTGATGATTCTTTTTTACTTGGTTTATGGCTAAATGAAAAGTTACTTCGTTTCTGATGTAGAATGACTTTGATTTGTTTGACTTTATTTTTAGTTCAATTACTGTGTTACTGTACAGTAATTTTTCTTTATTTTGGTAGTCTCTCTTTTAGTTCTTTTATTAGTTACTTGTAGTTAAAATGTTTTACCATAAGTTTATTTGTTATCATAGGCTGGTTGTAGCCTATTTATAGGGGTCTCTAGGTTGTAATTGAGGTATTATTCAGTAAAAAATTGATTCAAGAAAGCTTCAAGATTATTTCTACATTAGTTTCAAGTTTAAGAAGGAACCAAATTTCTTGTTTCAATAAAATAATGGAAATATAAGATCTCGATGACCTGTAATTAGTTATACTTATAGTACATATTTTGAGTGATACTAGAGGACTAGATAGAGATTGATTTTTTTTTTTTTTTTTTTTTTTTTGAGTTAAAGGGTGTGAGGATTCAAACATTTGACCTCTTGGTCAAGAGCATGACAATAGAGAACAACTCACTACTAAATCATTAAGTATATTTTGTTGTATAAGTTATCTCCTATCATTGATGTCAGGGGAAGGAATATTCATATGAATCGATCATACTGAACTGATGAGTATATTGACCGCACATTTGCCCAATCGAGTTAATATAGTTGTTCTCTGGTCATGAAACACAATTTAAAATGTTAGATTTTATTGCTTGTAGTGTATAACTGTACAGGTTTTTTGGTCGCATATTTTCTGGGCATGACTTAGACCACTCATATTATGCAGTCACATCCTTACAAATATATTGATTTTCTTTCCTCTTTAGTTACAATGATCTGACAGAGTAATTTCTGAAGATTTTTGTTTAATAAATGGTGATATCTGCAGGTCTATGGTTAATGATGATGACGAGTGGCCTTCCAAGTACTCTAAGTTCTTTGTTGAGGTAATATTGTGTGTTTTCCTTATTAGTATAAGGTTGTAACTATTTGTTTGTGAGACTCTATGTAGCTGAGGTGTTTATTTGCCTTACATTAATTTACCTTCTTACTTCACAATTATTTATTTAAGATATTCATGACCTGTTGACCACATAATAAATTAATTTTTCTTCGGTTCTTTCTAATTAATGTCATTACAACATAATCCCAGAAATCTCCTTGTGCAGCTTGATGATGGTGTAGACCTATCCTTCACTGACAAAAGGCGGTTTGCAAAAGTCTCCCTGCTCAAAGATGTACCTTCATATGACTCTTGAAATACCTTTAATTTCACGGATTTTATTTTAATATATGAGCATTTTAGTAATGAGTCACCGCCAATTTCATGCATTCTTTTTATAGATGGACTATTTAGCTTCCCTAACAATTTTGTTTTTACAGCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTCTAGAGCCTATGGCATTGGATGATTTTATTGAATCCATGGGCAAGAAGAAACTGGCGATTAAGACTCTATTGCTTGATCAGGTAAAACTTTCTACACCTTTGCCAGTAGTCTATGTTCATTGTTCACAAAGCATAAGCTTAACAATAAGGATGCTTTGTTTTGTATATGTTTGGTGTTTGATCATTTTGGTGTTGGATTAAAGGACTGAATCTGTGTGAAGTTGCAGTATCAGAGAGTGTTAACTGACTTCTGAGAATTAGAAATGAAATTTTATTTTCAATGCTATGGAGTATTGGAAATGAAATTTTATTTTCGTAGTTTACAATTATGATTTGTATTAATCTTCACCTGACTTCACAGAGCTACATTTCCGGTATTGGCAATTGGGTTGCAGATGAAGTGCTATATCAAGTAAGTTCACCTTACATTGTTAGCCTGAAATATAATATGATTAAAATTATAGGGATGATGTATATTTCATGGTGTTACTCTGTATGTGTAGATATGGATACACTTTCATTCTCTTTCGTCTATACTATAGAGACTAATTTAGGGGCTCCAGATGAGGACTAATCAGTTTAAAACATCCATTTAAAACAAAATTCTCAGGCAAGAATTCATCCAAATCAAAGTGCTGCAACCCTATCAAAAGAAAGTTGTGCAGCTTTGCACAAAAGCATACGAGAGGTACGACTTTGCTTTTTTACCAACCCCTCCAAATCATCCCCAACCCTTGCTGCCCTAGTCAGAGTTAGGCATGCTGTGCCCTTTAGAGATTTTTTTTTTTATAGCAAAACATTCATTCTTCATGGAAAATATAGAGGAACCACCTGTAGGTCCTTAAAAGAGCAGTTGAAGTTGATGCTGAGTCCAACAGCTTTCCTGAAGAATGGTTGTTTCATTTTCGATGGGGAAAAAGGCCTGGACAGGTCAATGGTAAGCTCAGTTAGATATTTGATCATTTTGATGAAGCAACTGTATTTACAGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTCCCTAGTAATTGGCTTTTCCATTCACGTGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTTTGCTCTTGACACTCTAAGATATTCTTCTTATTCTCCATTGGTATCATGATTTTCAATGTTCTGAAATTATTTAGACATGAATTGTTCAAATTCAATTAATTTCAGTTTGAAGAAAAACAAAATTTCAACCGCTTTTATTTGACCATTTCACGTGTGTTAGCTGATTTTGTTTGAAAATCTAATAAATTGGCTGCTAAAACCTTCTCAATGGCGTTTGCTTCCTTAAAGACAATAAACAAATAGTAATTCACAACTGCAATTTCTTTTATCTTCTGCAACGAGAAAAGGAGCAGTCAAAAAGAATCAATGACCAATAACTGTTAGCTAAAGATCCCTTGGCATTTGATTTCCCCCCGGTCCCCAGAATATCATATTACTTAGTAGAAATATGTTTGATTTGATGACCAGTCCGTAATGTTAAAAAAGACATGGTATTCTTGGCTTGCCTTCTCTTTGCCTATAACAAAAATTTGTTTTTGGTATTGTTTTGGCGTTCTCTCAAACATGTCTGCTGTATGCCGCAGGTAAGGAAATCCACTTTATTACTACAGGCGGCAGGGTATGTTGCTATGGAATATGAAAAGAAAACTAATCTAGTGCATTTGACGCACATTAGTACATGAATCATTTAAAGGCCTCATTTGATGAATATATTATTGTCGTGTCTTAGACGTCGGCCTTTGTACCCGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAACTTCAAAGAGAAAAGGCAATGATAGCAAAGAAATGAATGATGAGGGTGCTGGTAAATTAGTGAGCAAGACAGATAAAACTGCTGATACTAAGAAAAAGCCAAAGCCTAAAGGTCGCTCTAAGAAACCTTCAACAAAAAGAAAATCCAAAAGCGATGAAGACAACGACGATGGCTCTGATGAGGAAGCTGAAAATGATGATGCTAGTGATGATGACAATGGTCGAGGTGTTGGAATGAAGAAAGTGGGAAAGAAAACGAACATTGGGCAAATGGTTGATGCTGCTTCTGAATCAGAGAAGTCTTTGAAACAAACGGTTCAGAGCAGTAAAAATGGTATGGGGAGGAAGAAAGCAAAGTAA

mRNA sequence

ATGCCGGAGCTACCGGAGGTGGAGGCGGCGAGGAGAGCAATAGAAGAGCATTGCGTTGGGAAAGTGATTAAGAAGGCGGTGATAGCCGACGATACGAAGGTCATCGACGGCGTATCGCCTTCCGATTTCGAGAATTCCATCTTAGGCAAAACCATTCTCTCTGCCCATCGTAAGGGCAAGCACCTGTGGCTCCGCCTCGATTCTCCTCCTTTCCCTGCATTTCACTTCGGGATGGCGGGTGCCATATATATTAAAGGTGTAGCTGTCACAAACTATAAAAGGTCTATGGTTAATGATGATGACGAGTGGCCTTCCAAGTACTCTAAGTTCTTTGTTGAGCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTCTAGAGCCTATGGCATTGGATGATTTTATTGAATCCATGGGCAAGAAGAAACTGGCGATTAAGACTCTATTGCTTGATCAGAGCTACATTTCCGGTATTGGCAATTGGGTTGCAGATGAAGTGCTATATCAAGCAAGAATTCATCCAAATCAAAGTGCTGCAACCCTATCAAAAGAAAGTTGTGCAGCTTTGCACAAAAGCATACGAGAGGTACGACTTTGCTTTTTTACCAACCCCTCCAAATCATCCCCAACCCTTGCTGCCCTAGTCAGAGTTAGGCATGCTGTGCCCTTTAGAGATTTTTTTTTTTATAGCAAAACATTCATTCTTCATGGAAAATATAGAGGAACCACCTGTAGGTCCTTAAAAGAGCAGTTGAAGTTGATGCTGAGTCCAACAGCTTTCCTGAAGAATGGTTGTTTCATTTTCGATGGGGAAAAAGGCCTGGACAGGTCAATGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTCCCTAGTAATTGGCTTTTCCATTCACGTGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTAAGGAAATCCACTTTATTACTACAGGCGGCAGGACGTCGGCCTTTGTACCCGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAACTTCAAAGAGAAAAGGCAATGATAGCAAAGAAATGAATGATGAGGGTGCTGGTAAATTAGTGAGCAAGACAGATAAAACTGCTGATACTAAGAAAAAGCCAAAGCCTAAAGGTGTTGGAATGAAGAAAGTGGGAAAGAAAACGAACATTGGGCAAATGGTTGATGCTGCTTCTGAATCAGAGAAGTCTTTGAAACAAACGGTTCAGAGCAGTAAAAATGGTATGGGGAGGAAGAAAGCAAAGTAA

Coding sequence (CDS)

ATGCCGGAGCTACCGGAGGTGGAGGCGGCGAGGAGAGCAATAGAAGAGCATTGCGTTGGGAAAGTGATTAAGAAGGCGGTGATAGCCGACGATACGAAGGTCATCGACGGCGTATCGCCTTCCGATTTCGAGAATTCCATCTTAGGCAAAACCATTCTCTCTGCCCATCGTAAGGGCAAGCACCTGTGGCTCCGCCTCGATTCTCCTCCTTTCCCTGCATTTCACTTCGGGATGGCGGGTGCCATATATATTAAAGGTGTAGCTGTCACAAACTATAAAAGGTCTATGGTTAATGATGATGACGAGTGGCCTTCCAAGTACTCTAAGTTCTTTGTTGAGCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTCTAGAGCCTATGGCATTGGATGATTTTATTGAATCCATGGGCAAGAAGAAACTGGCGATTAAGACTCTATTGCTTGATCAGAGCTACATTTCCGGTATTGGCAATTGGGTTGCAGATGAAGTGCTATATCAAGCAAGAATTCATCCAAATCAAAGTGCTGCAACCCTATCAAAAGAAAGTTGTGCAGCTTTGCACAAAAGCATACGAGAGGTACGACTTTGCTTTTTTACCAACCCCTCCAAATCATCCCCAACCCTTGCTGCCCTAGTCAGAGTTAGGCATGCTGTGCCCTTTAGAGATTTTTTTTTTTATAGCAAAACATTCATTCTTCATGGAAAATATAGAGGAACCACCTGTAGGTCCTTAAAAGAGCAGTTGAAGTTGATGCTGAGTCCAACAGCTTTCCTGAAGAATGGTTGTTTCATTTTCGATGGGGAAAAAGGCCTGGACAGGTCAATGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTCCCTAGTAATTGGCTTTTCCATTCACGTGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTAAGGAAATCCACTTTATTACTACAGGCGGCAGGACGTCGGCCTTTGTACCCGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAACTTCAAAGAGAAAAGGCAATGATAGCAAAGAAATGAATGATGAGGGTGCTGGTAAATTAGTGAGCAAGACAGATAAAACTGCTGATACTAAGAAAAAGCCAAAGCCTAAAGGTGTTGGAATGAAGAAAGTGGGAAAGAAAACGAACATTGGGCAAATGGTTGATGCTGCTTCTGAATCAGAGAAGTCTTTGAAACAAACGGTTCAGAGCAGTAAAAATGGTATGGGGAGGAAGAAAGCAAAGTAA

Protein sequence

MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGKHLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVEPASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAALVRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGLDRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKGVGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMGRKKAK

Homology

[Close]

BLAST of HG10002183 vs. NCBI nr
Match: KAA0044473.1 (formamidopyrimidine-DNA glycosylase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 577.0 bits (1486), Expect = 1.3e-160
Identity = 326/485 (67.22%), Postives = 344/485 (70.93%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+EV                  
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEV------------------ 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                           LK  +++     +F +   F F    G 
Sbjct: 241 --------------------------------LKRAVEVDAESNSFPEEWLFHF--RWGK 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 RPGQVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKSE 420

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG  
Sbjct: 421 DEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGRR 433

[Close]

BLAST of HG10002183 vs. NCBI nr
Match: XP_008454182.1 (PREDICTED: formamidopyrimidine-DNA glycosylase isoform X1 [Cucumis melo] >TYK29600.1 formamidopyrimidine-DNA glycosylase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 560.8 bits (1444), Expect = 9.9e-156
Identity = 318/485 (65.57%), Postives = 332/485 (68.45%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHC+GKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCIGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKSE 402

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG  
Sbjct: 421 DEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGRR 402

[Close]

BLAST of HG10002183 vs. NCBI nr
Match: XP_038877199.1 (formamidopyrimidine-DNA glycosylase isoform X3 [Benincasa hispida])

HSP 1 Score: 552.7 bits (1423), Expect = 2.7e-153
Identity = 319/490 (65.10%), Postives = 333/490 (67.96%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSP+DFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPADFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELEDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLKDPASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADT----KKKPKPKG--------- 420
           LTGAE KNQ SKRKGN+SKEMNDEGA +LVSKT+KTADT    KK+PKPKG         
Sbjct: 361 LTGAELKNQNSKRKGNNSKEMNDEGASELVSKTEKTADTADTKKKQPKPKGRPKKPSTKR 407

Query: 421 ---------------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSS 428
                                      VG KKVGK TN G+M++AASE EKSLKQTV SS
Sbjct: 421 KSKSDDVDGSEEEAENDDASDDDDGHCVGKKKVGKTTNNGRMLEAASEPEKSLKQTVLSS 407

[Close]

BLAST of HG10002183 vs. NCBI nr
Match: XP_004152179.1 (formamidopyrimidine-DNA glycosylase isoform X1 [Cucumis sativus] >KGN52932.1 hypothetical protein Csa_015068 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 1.1e-151
Identity = 314/485 (64.74%), Postives = 327/485 (67.42%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWL LDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDE  G+LVSKT KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDESDGELVSKTKKTADIKQKPKPKGRSKKPSKRKSKSE 402

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KKVG KTNIGQ  DAASE +KSLKQTV+SS+ G  
Sbjct: 421 DDDGSDEEAENDDASDDDNGRPEGKKKVGTKTNIGQRFDAASEPDKSLKQTVRSSQIGRR 402

[Close]

BLAST of HG10002183 vs. NCBI nr
Match: XP_038877190.1 (formamidopyrimidine-DNA glycosylase isoform X1 [Benincasa hispida])

HSP 1 Score: 542.3 bits (1396), Expect = 3.6e-150
Identity = 319/507 (62.92%), Postives = 340/507 (67.06%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSP+DFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPADFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELEDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQ  
Sbjct: 121 SFTDKRRFAKVSLLKDPASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQM- 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
                                          C    + IR                    
Sbjct: 181 ------------------------------KCYIKQEFIR-------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
           ++V    P +     ++ +      RGTTCRSLK+QLKLM SPTAFLKNGCFIFDGEKGL
Sbjct: 241 IKVLQPYPKKVVQLCTRAY-----KRGTTCRSLKKQLKLMPSPTAFLKNGCFIFDGEKGL 300

Query: 301 DRSM-----------------VIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIH 360
           DRSM                 VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIH
Sbjct: 301 DRSMVSSVRHLIILMKQLYLQVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIH 360

Query: 361 FITTGGRTSAFVPELQKLTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADT---- 420
           FITTGGRTSAFVPELQKLTGAE KNQ SKRKGN+SKEMNDEGA +LVSKT+KTADT    
Sbjct: 361 FITTGGRTSAFVPELQKLTGAELKNQNSKRKGNNSKEMNDEGASELVSKTEKTADTADTK 420

Query: 421 KKKPKPKG------------------------------------VGMKKVGKKTNIGQMV 428
           KK+PKPKG                                    VG KKVGK TN G+M+
Sbjct: 421 KKQPKPKGRPKKPSTKRKSKSDDVDGSEEEAENDDASDDDDGHCVGKKKVGKTTNNGRML 451

[Close]

BLAST of HG10002183 vs. ExPASy Swiss-Prot
Match: O80358 (Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=FPG1 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-104
Identity = 221/435 (50.80%), Postives = 258/435 (59.31%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD KVI G+SPSDF+ SILGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           +LWL LDSPPFP+F FGMAGAIYIKGVAVT YKRS V D +EWPSKYSKFFVE       
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           P SV PIS+LGPDALLEPM +D+F ES+ KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+E                   
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKA+EV ADSS+FPS W+FH+REKKPGKAFVDGK+I FIT GGRT+A+VPELQK
Sbjct: 301 ----VIEKAVEVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 352

Query: 361 LTGAEPKNQTSKRKGNDS-KEMNDEGAG----KLVSKTDKTADTKKKPKPKGVGMKKVGK 408
           L G + +     R      K   D+G G    +   K D++A +KK  KP+G   KK   
Sbjct: 361 LYGKDAEKAAKVRPAKRGVKPKEDDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPAS 352

[Close]

BLAST of HG10002183 vs. ExPASy Swiss-Prot
Match: A9B0X2 (Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785 / 114-95) OX=316274 GN=mutM PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-22
Identity = 70/213 (32.86%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVE  RR++E+  VG+           K++D  SP  F  +I  + I    R+ K
Sbjct: 1   MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKG------------VAVTNYKRSMVNDDDEWPSKYS 120
           +L + LD+      H  M G + +              VA+ N +    +D    P K+ 
Sbjct: 61  YLLIELDNHETLIVHLRMTGQMLVVAADEPADRHTHVVVALDNGRELRFHD----PRKFG 120

Query: 121 KF-FVEPASVPPIS-KLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSYISGIGNWVA 180
           ++  V+ + V  ++ +LGP+ L +   LDDF + + +K   IK  LLDQS ++G+GN  A
Sbjct: 121 RWSLVDRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLAGVGNIYA 180

Query: 181 DEVLYQARIHPNQSAATLSKESCAALHKSIREV 200
           DE L+ A+IHP +SA +L+    A L ++I+ V
Sbjct: 181 DEALWLAKIHPLRSANSLNANEIAELFEAIKTV 209

[Close]

BLAST of HG10002183 vs. ExPASy Swiss-Prot
Match: Q8FP17 (Formamidopyrimidine-DNA glycosylase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=mutM PE=3 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-19
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGK-VIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKG 60
           MPELPEVE  RR +EEH VG+ ++  AV+   T        ++ E ++ G  + + +R+G
Sbjct: 1   MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60

Query: 61  KHLWLRLDSPPFPA-------FHFGMAGAIYIKGVAVT----NYKRSMVNDDDE-WPSKY 120
           K LWL LD     A        H GM+G + +K    T       R+ ++D +E W    
Sbjct: 61  KFLWLELDDVAQQAPSGLGLLVHLGMSGQMLVKSPDATLNPHLRARAELDDGNEVWFVDQ 120

Query: 121 SKF----FVEPASVPP--ISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSYISGI 180
             F      E     P  +S +  D L + + +      +  K   IK LLL+Q  +SGI
Sbjct: 121 RTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEIKRLLLNQEIVSGI 180

Query: 181 GNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREV 200
           GN  ADE+L++A IHP Q A+ +S     AL ++ REV
Sbjct: 181 GNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREV 218

[Close]

BLAST of HG10002183 vs. ExPASy Swiss-Prot
Match: B2HJJ6 (Formamidopyrimidine-DNA glycosylase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=mutM PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.1e-19
Identity = 75/223 (33.63%), Postives = 108/223 (48.43%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKV-IDGVSPSDFENSILGKTILSAHRKG 60
           MPELPEVE  RR +++H VGK +    +     V      P+D    +LG  I    R+G
Sbjct: 1   MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60

Query: 61  KHLWLRLDS--------PPFPAF--HFGMAGAIYIKGVAVTNYKR-SMVNDDDEWPSKYS 120
           K+LWL LD+         P  A   H GM+G + + GV    + R S V DD    S   
Sbjct: 61  KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGTVLSFAD 120

Query: 121 K-----------FFVEPASVP-PISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQS 180
           +             V+ + VP P++ L  D L     +D  I+ +  K   IK  LLDQ 
Sbjct: 121 QRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEIKRQLLDQQ 180

Query: 181 YISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREV 200
            +SGIGN  ADE L++A++H  + AATL++    A+  +  +V
Sbjct: 181 VVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADV 223

[Close]

BLAST of HG10002183 vs. ExPASy Swiss-Prot
Match: A0PQ49 (Formamidopyrimidine-DNA glycosylase OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=mutM PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.0e-19
Identity = 74/223 (33.18%), Postives = 108/223 (48.43%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKV-IDGVSPSDFENSILGKTILSAHRKG 60
           MPELPEVE  RR +++H VGK +    +     V      P+D    +LG  I    R+G
Sbjct: 1   MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60

Query: 61  KHLWLRLDS--------PPFPAF--HFGMAGAIYIKGVAVTNYKR-SMVNDDDEWPSKYS 120
           K+LWL LD+         P  A   H GM+G + + GV    + R S V DD    S   
Sbjct: 61  KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGTVLSFAD 120

Query: 121 K-----------FFVEPASVP-PISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQS 180
           +             V+ + VP P++ L  D L     +D  I+ +  K   +K  LLDQ 
Sbjct: 121 QRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEVKRRLLDQQ 180

Query: 181 YISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREV 200
            +SGIGN  ADE L++A++H  + AATL++    A+  +  +V
Sbjct: 181 VVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADV 223

[Close]

BLAST of HG10002183 vs. ExPASy TrEMBL
Match: A0A5A7TLT5 (Formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002090 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.4e-161
Identity = 326/485 (67.22%), Postives = 344/485 (70.93%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+EV                  
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEV------------------ 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                           LK  +++     +F +   F F    G 
Sbjct: 241 --------------------------------LKRAVEVDAESNSFPEEWLFHF--RWGK 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 RPGQVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKSE 420

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG  
Sbjct: 421 DEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGRR 433

[Close]

BLAST of HG10002183 vs. ExPASy TrEMBL
Match: A0A5D3E227 (Formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002090 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 4.8e-156
Identity = 318/485 (65.57%), Postives = 332/485 (68.45%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHC+GKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCIGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKSE 402

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG  
Sbjct: 421 DEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGRR 402

[Close]

BLAST of HG10002183 vs. ExPASy TrEMBL
Match: A0A1S3BY51 (formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494665 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 4.8e-156
Identity = 318/485 (65.57%), Postives = 332/485 (68.45%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHC+GKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCIGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKSE 402

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG  
Sbjct: 421 DEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGRR 402

[Close]

BLAST of HG10002183 vs. ExPASy TrEMBL
Match: A0A0A0KWY6 (FPG_CAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006390 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 5.5e-152
Identity = 314/485 (64.74%), Postives = 327/485 (67.42%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWL LDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKALEVGADSSRFP+NW+FHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK
Sbjct: 301 ----VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360

Query: 361 LTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------- 420
           LTGAEPKNQ SKRKGND+K+MNDE  G+LVSKT KTAD K+KPKPKG             
Sbjct: 361 LTGAEPKNQNSKRKGNDNKKMNDESDGELVSKTKKTADIKQKPKPKGRSKKPSKRKSKSE 402

Query: 421 ----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGMG 428
                                  G KKVG KTNIGQ  DAASE +KSLKQTV+SS+ G  
Sbjct: 421 DDDGSDEEAENDDASDDDNGRPEGKKKVGTKTNIGQRFDAASEPDKSLKQTVRSSQIGRR 402

[Close]

BLAST of HG10002183 vs. ExPASy TrEMBL
Match: A0A1S3BY09 (formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494665 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 8.4e-145
Identity = 303/486 (62.35%), Postives = 324/486 (66.67%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHC+GKVIKKAVIADDTKVIDGVSPSDFE S+LGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCIGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE       
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           PASVPPISKLGPDALLEPMALD+FIES+ KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSI+E                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSR-EKKPGKAFVDGKEIHFITTGGRTSAFVPELQ 360
               V+++A+EV A+S+ FP  WLFH R  K+PG+  V+GKEIHFITTGGRTSAFVPELQ
Sbjct: 301 ----VLKRAVEVDAESNSFPEEWLFHFRWGKRPGQ--VNGKEIHFITTGGRTSAFVPELQ 360

Query: 361 KLTGAEPKNQTSKRKGNDSKEMNDEGAGKLVSKTDKTADTKKKPKPKG------------ 420
           KLTGAEPKNQ SKRKGND+K+MNDEG G+LVSKT+KTAD K+KPKPKG            
Sbjct: 361 KLTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTADIKQKPKPKGRSKKPSKRKSKS 401

Query: 421 -----------------------VGMKKVGKKTNIGQMVDAASESEKSLKQTVQSSKNGM 428
                                   G KK+GKKTNIGQ  DAASE EKSLKQTVQSS+NG 
Sbjct: 421 EDEDGSDEEAENDDASDDDNGRPEGNKKMGKKTNIGQRFDAASEPEKSLKQTVQSSRNGR 401

[Close]

BLAST of HG10002183 vs. TAIR 10
Match: AT1G52500.2 (MUTM homolog-1 )

HSP 1 Score: 381.7 bits (979), Expect = 7.6e-106
Identity = 221/435 (50.80%), Postives = 258/435 (59.31%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD KVI G+SPSDF+ SILGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           +LWL LDSPPFP+F FGMAGAIYIKGVAVT YKRS V D +EWPSKYSKFFVE       
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           P SV PIS+LGPDALLEPM +D+F ES+ KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREVRLCFFTNPSKSSPTLAAL 240
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+E                   
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKE------------------- 240

Query: 241 VRVRHAVPFRDFFFYSKTFILHGKYRGTTCRSLKEQLKLMLSPTAFLKNGCFIFDGEKGL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 DRSMVIEKALEVGADSSRFPSNWLFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQK 360
               VIEKA+EV ADSS+FPS W+FH+REKKPGKAFVDGK+I FIT GGRT+A+VPELQK
Sbjct: 301 ----VIEKAVEVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 352

Query: 361 LTGAEPKNQTSKRKGNDS-KEMNDEGAG----KLVSKTDKTADTKKKPKPKGVGMKKVGK 408
           L G + +     R      K   D+G G    +   K D++A +KK  KP+G   KK   
Sbjct: 361 LYGKDAEKAAKVRPAKRGVKPKEDDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPAS 352

[Close]

BLAST of HG10002183 vs. TAIR 10
Match: AT1G52500.1 (MUTM homolog-1 )

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-84
Identity = 155/222 (69.82%), Postives = 175/222 (78.83%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFENSILGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD KVI G+SPSDF+ SILGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVE------- 120
           +LWL LDSPPFP+F FGMAGAIYIKGVAVT YKRS V D +EWPSKYSKFFVE       
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 ----------------PASVPPISKLGPDALLEPMALDDFIESMGKKKLAIKTLLLDQSY 180
                           P SV PIS+LGPDALLEPM +D+F ES+ KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIREV 200
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+EV
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEV 222

The following BLAST results are available for this feature:

BLAST of HG10002183 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044473.1	1.3e-160	67.22	formamidopyrimidine-DNA glycosylase isoform X2 [Cucumis melo var. makuwa]	[more]
XP_008454182.1	9.9e-156	65.57	PREDICTED: formamidopyrimidine-DNA glycosylase isoform X1 [Cucumis melo] >TYK296...	[more]
XP_038877199.1	2.7e-153	65.10	formamidopyrimidine-DNA glycosylase isoform X3 [Benincasa hispida]	[more]
XP_004152179.1	1.1e-151	64.74	formamidopyrimidine-DNA glycosylase isoform X1 [Cucumis sativus] >KGN52932.1 hyp...	[more]
XP_038877190.1	3.6e-150	62.92	formamidopyrimidine-DNA glycosylase isoform X1 [Benincasa hispida]	[more]

BLAST of HG10002183 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80358	1.1e-104	50.80	Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=FPG1 PE=1...	[more]
A9B0X2	1.0e-22	32.86	Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus (strain ATCC 23...	[more]
Q8FP17	2.4e-19	33.49	Formamidopyrimidine-DNA glycosylase OS=Corynebacterium efficiens (strain DSM 445...	[more]
B2HJJ6	3.1e-19	33.63	Formamidopyrimidine-DNA glycosylase OS=Mycobacterium marinum (strain ATCC BAA-53...	[more]
A0PQ49	4.0e-19	33.18	Formamidopyrimidine-DNA glycosylase OS=Mycobacterium ulcerans (strain Agy99) OX=...	[more]

BLAST of HG10002183 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLT5	6.4e-161	67.22	Formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3E227	4.8e-156	65.57	Formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BY51	4.8e-156	65.57	formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KWY6	5.5e-152	64.74	FPG_CAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006390 PE=...	[more]
A0A1S3BY09	8.4e-145	62.35	formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of HG10002183 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52500.2	7.6e-106	50.80	MUTM homolog-1	[more]
AT1G52500.1	1.7e-84	69.82	MUTM homolog-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 426..427
None	No IPR available	GENE3D	1.10.8.50		coord: 278..346 e-value: 4.1E-11 score: 45.1
None	No IPR available	GENE3D	1.10.8.50		coord: 123..216 e-value: 2.9E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..427
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..420
None	No IPR available	PANTHER	PTHR22993:SF26	OS06G0643600 PROTEIN	coord: 1..113
None	No IPR available	PANTHER	PTHR22993	FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE	coord: 113..199
None	No IPR available	PANTHER	PTHR22993:SF26	OS06G0643600 PROTEIN	coord: 281..419 coord: 113..199
None	No IPR available	PANTHER	PTHR22993	FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE	coord: 281..419 coord: 1..113
None	No IPR available	CDD	cd08972	PF_Nei_N	coord: 1..113 e-value: 6.11182E-55 score: 176.728
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	SMART	SM00898	Fapy_DNA_glyco_2	coord: 2..121 e-value: 2.2E-12 score: 57.1
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	PFAM	PF01149	Fapy_DNA_glyco	coord: 1..112 e-value: 5.4E-24 score: 85.1
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	PROSITE	PS51068	FPG_CAT	coord: 2..98 score: 20.385483
IPR015886	DNA glycosylase/AP lyase, H2TH DNA-binding	SMART	SM01232	H2TH_2	coord: 123..205 e-value: 1.3E-23 score: 94.4
IPR015886	DNA glycosylase/AP lyase, H2TH DNA-binding	PFAM	PF06831	H2TH	coord: 123..199 e-value: 1.9E-25 score: 88.6
IPR035937	MutM-like, N-terminal	GENE3D	3.20.190.10		coord: 1..116 e-value: 1.8E-32 score: 114.4
IPR035937	MutM-like, N-terminal	SUPERFAMILY	81624	N-terminal domain of MutM-like DNA repair proteins	coord: 2..128
IPR010979	Ribosomal protein S13-like, H2TH	SUPERFAMILY	46946	S13-like H2TH domain	coord: 122..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002183.1	HG10002183.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0019104	DNA N-glycosylase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds
molecular_function	GO:0003676	nucleic acid binding