HG10002174 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002174
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PPPDE domain-containing protein
Location	Chr11: 4197616 .. 4200072 (+)
RNA-Seq Expression	HG10002174
Synteny	HG10002174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGTTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTACGCATATTGGTTCGGCCTCGGAGTTTATCATTCTGGTCTTCAAGGTTTGTTCTAATTTCTAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATTCATCGCTTTCTCTGCTGGAATCTGCTGTTTAGATCTACATTTCCGAGCTTAATCTGGATTTGGTAATTGTTGAACGATGAATCCACTTTTGATGAGTTTTGTTTCTGTTTGGTTAGAGAGAAAATGGGGGGGAAATCGAATGAACTTCTAGGTTTTAGCTTTATGTATCCTTGTTTGTTGTTCTTGTAAGTGTGATTTTCTTCACCTCCCGTTTTGACGGGTTCTGTTTGGATGGTGAGAAAATGATGGAAAATTAGACGAACTTCCTTCTAGGTTTTTAGTTTTAGTACACTTAGTTTGTTTGTTCTTGAACTATAATTTACTCTTGGACAAACTTTCCAGCTGTTTTCTGGACTTCCATTTTGATGGATTCTGTTTGGATGGCGAGAAAATGGAGGAAAATTGGACTAACTTGAAGGATTTTACTTTTGGTGAACTTGTTGAGTGTTCTTGAACTATAATTTGCTATTGGACAAACTTTCCAGCTGTTTTCTGGACCTCCATTTTCATGGATTCTGTTTGGATGGTGGGAAAATGGAGGAAAATTGGACTAACTTGAAGGATTTTACTTTTGGTAAACTTGTTGAGTGTTCTTGAACTATTTCCTAGTGTTTTCTGGACCTTCATTTTGATGGGTTGTGTTTGAATGAACTTTTAGTCTTGGAAAATCTTTTCTGCTGTTTTCTGGACCTCCATTTTTTTATCTGAAACTGAGTAAATGTATGGGATTCTGATGCAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGTACAGGGATATTTGAAGGGGAACCAAAGCAATGTGATGGATTCAAGTTCAGAAAATCAATTTTGATTGGGAAAACAGATTTAAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTAATCACTAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGTAAGATAAGTAAGATCCCACTTCAATTCCTGTTTTGATCTAAATTTACATCTCCTTTTCTACTTCTTGCTGTTTTTTTTTTTCCTTTTTTCTCTCTTTCTTTTTCCTGTTTATTTCTCTTTGAATGCTGATGATGAACTTTAATGCTTTTGTATCTCCCTACTTTAAATGTTTTACTTTTAGTCCCTACAATTTTATATTTAAAAAAAGTATTTTAATCCTTTTTACTAATTTAATTAAAGGTAAAATACTATTTTTGTTCATATACTTTGAAGTTTGATCATTTTTAATCTCTGTACTTTCAAATGTTTAATTTTAGTGTATATACTTTTAGTCCCTTAAAATTAATTTTTATCGAAATTGTCTAAAATTTTCATATAAAAAAATATAATATATAAATATGTTCAAAATTTATAGTAAAATTATTAATAGATAACTAAAAAAATAAAAATATAACAATAACAAGCTAGATGACCTAAATTTTAAGATTTAATAAAAATACATGGACTAAAACTAAACAAACTTCAAAATATAGGAACCCACGTGTTATTTCAAGTTTAAACCTTCACTAAATTATTTAACAAAAACTTGCCTATAAATTATGTTTTGTATACACTTAACTAATTTGCGTTGGAATGGTTGTGAGTCCAAAATTGTCTAGATAACTATTTAGTTTTTGGTTTTTGAAAATTATGTTTTGTTTTTTTAGTATCATTATTTTCATGTTTGAAGAGGAAACATTTAACTTCTTAACCAAATTCTAAAACTAAAAATTACTTCTTCTTGTTTTCAAAATTTAGGACTTCGAAAACGTAGATAAACGATTATGAAAAATGAACCAGAATACTAATATAAGGTAGGTTGTTGAGCAATAGAATACAAGGACAAAGTTCAATTTAAACCCTTTTTTTTTTAATATCTATCATGGATTGTGTTGAATCTTTGTGTCTGTTAAGATTTACTGAGATCGTTTTCAAAATGCAGGGTGGATATGCAACTGTGTGTTACCAGCAACTTTAAACTCCACAAAATTTGGTCAAAACAGAGTGCAAAAGAAAACAAGTGAAGAAAAACAAGAAGAAGGAGGAGAAGAAGAAGAGAAGAAGAAGGAATTGCCAAGAATCCAAACAGCTGAAATTCCAGCTTCTAATTCTTCTTCTTCTTCTTCTTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGTCCTCGTCTTCCAACTTCACCATTGA

mRNA sequence

ATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGTTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTACGCATATTGGTTCGGCCTCGGAGTTTATCATTCTGGTCTTCAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGTACAGGGATATTTGAAGGGGAACCAAAGCAATGTGATGGATTCAAGTTCAGAAAATCAATTTTGATTGGGAAAACAGATTTAAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTAATCACTAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGAGGCAGAAGCAGAACAAGACGTCCTCGTCTTCCAACTTCACCATTGA

Coding sequence (CDS)

ATGTTGTGCAGAAGAATCTCCAGCAATGGCGATTCCGGATCCGTTCCAGTGTACCTCAATGTGTACGATCTGACGCCCATTAATGGCTACGCATATTGGTTCGGCCTCGGAGTTTATCATTCTGGTCTTCAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAATATCCAAGTACAGGGATATTTGAAGGGGAACCAAAGCAATGTGATGGATTCAAGTTCAGAAAATCAATTTTGATTGGGAAAACAGATTTAAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTAATCACTAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGAGGCAGAAGCAGAACAAGACGTCCTCGTCTTCCAACTTCACCATTGA

Protein sequence

MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPSWVNRLARIEAEAEQDVLVFQLHH

Homology

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BLAST of HG10002174 vs. NCBI nr
Match: XP_038881748.1 (deSI-like protein At4g17486 [Benincasa hispida] >XP_038881756.1 deSI-like protein At4g17486 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNGDSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

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BLAST of HG10002174 vs. NCBI nr
Match: KAA0044482.1 (deSI-like protein [Cucumis melo var. makuwa] >TYK29609.1 deSI-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GF+FRKSILIGKTDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. NCBI nr
Match: XP_008454170.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GF+FRKSILIGKTDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

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BLAST of HG10002174 vs. NCBI nr
Match: XP_004152173.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN52942.1 hypothetical protein Csa_015067 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFRKSILIG+TDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. NCBI nr
Match: XP_022153427.1 (deSI-like protein At4g17486 [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74
Identity = 133/140 (95.00%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNGDSGS PVYLNVYDLTPINGYAYWFGLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCDGFKFR+SILIGKTDLS+AEVRSLMEELGKDYRGNAYNLITKNCNHFCN 
Sbjct: 61  GIFEGEPKQCDGFKFRRSILIGKTDLSQAEVRSLMEELGKDYRGNAYNLITKNCNHFCNQ 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VC+KLTGN IPSWVNRLARI
Sbjct: 121 VCMKLTGNSIPSWVNRLARI 140

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BLAST of HG10002174 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.8e-49
Identity = 76/136 (55.88%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 5   RISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFE 64
           R  S+G++   PVYLNVYDLTP+N Y YWFG+G++HSG++ H +E+ +GAHEYP++G++E
Sbjct: 16  RDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYE 75

Query: 65  GEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIK 124
            EP+ C GF FR+S+L+G T +S ++ RS ME+L + Y G+ Y+LI KNCNHF   VC++
Sbjct: 76  VEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQ 135

Query: 125 LTGNPIPSWVNRLARI 141
           LTG PIP W+NRLAR+
Sbjct: 136 LTGKPIPGWINRLARV 151

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BLAST of HG10002174 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-33
Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 16  PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----D 75
           P+ LNVYD+  IN Y    G+GV+HSG+QV+G EFA+G H YP +G+FE  P       D
Sbjct: 5   PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGD 64

Query: 76  GFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIP 135
            FKF+++I +G TD +E ++  ++EELGK+Y+GNAY+L+ KNCNHF + +   L G  IP
Sbjct: 65  TFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIP 124

Query: 136 SWVNRLA 139
            WVNRLA
Sbjct: 125 RWVNRLA 131

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BLAST of HG10002174 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.8e-32
Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 16  PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----D 75
           PV LNVYD+  IN +    G+GV+HSG++++G EFA+G H YP +GIFE  P       +
Sbjct: 5   PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGE 64

Query: 76  GFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIP 135
            FKF+++I++G TD +E +V  ++EE+GK+Y+GNAY+L+ KNCNHF + +   L G  IP
Sbjct: 65  TFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIP 124

Query: 136 SWVNRLA 139
            WVNRLA
Sbjct: 125 RWVNRLA 131

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BLAST of HG10002174 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.7e-31
Identity = 58/128 (45.31%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 17  VYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----DG 76
           V LNVYD+  +N YA   G+G++HSG++V G+E+A+G H Y  +G+FE  P+      + 
Sbjct: 32  VRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELGET 91

Query: 77  FKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPS 136
           FKF++SI++G+T+ S +++R L++ LG+D+RG+ Y+LI++NCNHF   +  +LTG  IP 
Sbjct: 92  FKFKESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDIPG 151

Query: 137 WVNRLARI 141
           W+NRLA +
Sbjct: 152 WINRLANL 159

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BLAST of HG10002174 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-31
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 17  VYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----DG 76
           V LNVYD+  +N Y    G+GV+HSG++V+G EFA+G H YP +GIFE  P       + 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 77  FKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPS 136
           FKF++++++G TD  E ++  ++EELGK+Y+GNAY+L+ KNCNHF + +   L G  IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 137 WVNRLA 139
           W+NRLA
Sbjct: 127 WINRLA 132

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BLAST of HG10002174 vs. ExPASy TrEMBL
Match: A0A5A7TMF3 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002200 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GF+FRKSILIGKTDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. ExPASy TrEMBL
Match: A0A1S3BXH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GF+FRKSILIGKTDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. ExPASy TrEMBL
Match: A0A0A0KX01 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGS PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFRKSILIG+TDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSWVNRLARI
Sbjct: 121 VCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. ExPASy TrEMBL
Match: A0A6J1DIV3 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.4e-75
Identity = 133/140 (95.00%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNGDSGS PVYLNVYDLTPINGYAYWFGLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCDGFKFR+SILIGKTDLS+AEVRSLMEELGKDYRGNAYNLITKNCNHFCN 
Sbjct: 61  GIFEGEPKQCDGFKFRRSILIGKTDLSQAEVRSLMEELGKDYRGNAYNLITKNCNHFCNQ 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VC+KLTGN IPSWVNRLARI
Sbjct: 121 VCMKLTGNSIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. ExPASy TrEMBL
Match: A0A6J1KAM3 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111492581 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 130/140 (92.86%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNGDSGS PVYLNVYDLTPINGYAYW GLGV+HSG+QVHG+E+AFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWLGLGVFHSGVQVHGVEYAFGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCDGFKFRKSILIGKTDL++AEVRSLMEEL KDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRKSILIGKTDLNQAEVRSLMEELSKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
           VCIKLTGNPIPSW+NRLARI
Sbjct: 121 VCIKLTGNPIPSWINRLARI 140

[Close]

BLAST of HG10002174 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-66
Identity = 112/140 (80.00%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MLCRRISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCR+ SS  D G+VPVYLNVYDLTPINGYAYW GLGVYHSG++VHGIE+A+GAHEYPST
Sbjct: 1   MLCRKNSSLVDRGNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPST 60

Query: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GF FRKSILIGKTDL   EVR+ ME+L  +Y+G++YNLITKNCNHFC+ 
Sbjct: 61  GIFEGEPKQCEGFTFRKSILIGKTDLGPLEVRATMEQLADNYKGSSYNLITKNCNHFCDE 120

Query: 121 VCIKLTGNPIPSWVNRLARI 141
            CIKLTGNPIPSWVNRLARI
Sbjct: 121 TCIKLTGNPIPSWVNRLARI 140

[Close]

BLAST of HG10002174 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.3e-57
Identity = 98/142 (69.01%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 1   MLCRRISSNG---DSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEY 60
           MLCR +   G     GSVPVYLNVYDLTPINGYAYW GLG+YHSG++VHG+E+ FGAH++
Sbjct: 1   MLCRMVVVTGRKKKPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVEVHGVEYGFGAHDH 60

Query: 61  PSTGIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHF 120
            +TGIFE EPKQC GF FRKSILIG+TDL    VR  ME+L ++Y GN+Y+LITKNCNHF
Sbjct: 61  STTGIFEVEPKQCPGFTFRKSILIGRTDLDPENVRVFMEKLAEEYSGNSYHLITKNCNHF 120

Query: 121 CNHVCIKLTGNPIPSWVNRLAR 140
           CN VC++LT   IPSWVNRLAR
Sbjct: 121 CNDVCVQLTRRSIPSWVNRLAR 142

[Close]

BLAST of HG10002174 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 210.7 bits (535), Expect = 8.5e-55
Identity = 95/142 (66.90%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MLCRR--ISSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYP 60
           MLC +  +     SGSVPVYLNVYDLTP+N Y YW GLGV+HSG++VHG+E+AFGAHE  
Sbjct: 1   MLCFKGSVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHGVEYAFGAHESS 60

Query: 61  STGIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFC 120
           STGIFE EPK+C GF FRKSIL+GKTDL   EVR  ME+L ++Y+GN Y+LIT+NCNHFC
Sbjct: 61  STGIFEVEPKKCPGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFC 120

Query: 121 NHVCIKLTGNPIPSWVNRLARI 141
           N VC+KL    IP WVNRLAR+
Sbjct: 121 NEVCLKLAQKSIPRWVNRLARL 142

[Close]

BLAST of HG10002174 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 210.7 bits (535), Expect = 8.5e-55
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 1   MLCRRIS--SNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYP 60
           M CR +S     +SG+VPVYLNVYDLTP+N Y YW G+G+YHSGL+VHG+E+ +GAHE  
Sbjct: 1   MFCRNVSVRRKKNSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKS 60

Query: 61  STGIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFC 120
           S+GIFE EPK+C GF FRKSIL+G+T++   EVRS ME+L ++Y+GN Y+LIT+NCNHFC
Sbjct: 61  SSGIFEVEPKKCPGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFC 120

Query: 121 NHVCIKLTGNPIPSWVNRLARI 141
           NHV +KLT   IPSWVNRLAR+
Sbjct: 121 NHVSLKLTHKSIPSWVNRLARL 142

[Close]

BLAST of HG10002174 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 200.7 bits (509), Expect = 8.8e-52
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 7   SSNGDSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGE 66
           S+N   G  PVYLNVYDLTPINGY YW GLG++HSG++VHG+E+AFGAH+Y ++G+FE E
Sbjct: 61  SNNHGPGRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVE 120

Query: 67  PKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLT 126
           P+QC GFKF+KSI IG T+L+  +VR  ME++   Y GN Y+LI KNCNHFC  VC KLT
Sbjct: 121 PRQCPGFKFKKSIFIGTTNLNPTQVREFMEDMACSYYGNMYHLIVKNCNHFCQDVCYKLT 180

Query: 127 GNPIPSWVNRLARI 141
           G  IP WVNRLA+I
Sbjct: 181 GKKIPKWVNRLAQI 194

The following BLAST results are available for this feature:

BLAST of HG10002174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881748.1	8.7e-78	99.29	deSI-like protein At4g17486 [Benincasa hispida] >XP_038881756.1 deSI-like protei...	[more]
KAA0044482.1	6.2e-76	96.43	deSI-like protein [Cucumis melo var. makuwa] >TYK29609.1 deSI-like protein [Cucu...	[more]
XP_008454170.1	6.2e-76	96.43	PREDICTED: deSI-like protein At4g17486 [Cucumis melo]	[more]
XP_004152173.1	8.2e-76	96.43	deSI-like protein At4g17486 [Cucumis sativus] >KGN52942.1 hypothetical protein C...	[more]
XP_022153427.1	1.5e-74	95.00	deSI-like protein At4g17486 [Momordica charantia]	[more]

BLAST of HG10002174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VG8	8.8e-49	55.88	DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV...	[more]
Q5PQ09	8.9e-33	51.18	Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1	[more]
Q6DC39	9.8e-32	49.61	Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1	[more]
H2KZK4	3.7e-31	45.31	Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4....	[more]
Q9BSY9	8.3e-31	48.41	Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1	[more]

BLAST of HG10002174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMF3	3.0e-76	96.43	DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00...	[more]
A0A1S3BXH1	3.0e-76	96.43	deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1	[more]
A0A0A0KX01	3.9e-76	96.43	PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 ...	[more]
A0A6J1DIV3	7.4e-75	95.00	deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 ...	[more]
A0A6J1KAM3	1.3e-74	92.86	deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111492581 PE=3 SV=...	[more]

BLAST of HG10002174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80690.1	1.3e-66	80.00	PPPDE putative thiol peptidase family protein	[more]
AT5G25170.1	5.3e-57	69.01	PPPDE putative thiol peptidase family protein	[more]
AT2G25190.1	8.5e-55	66.90	PPPDE putative thiol peptidase family protein	[more]
AT4G31980.1	8.5e-55	64.79	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,...	[more]
AT1G47740.1	8.8e-52	64.18	PPPDE putative thiol peptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008580	PPPDE peptidase domain	SMART	SM01179	DUF862_2a	coord: 15..154 e-value: 1.0E-52 score: 191.1
IPR008580	PPPDE peptidase domain	PFAM	PF05903	Peptidase_C97	coord: 16..142 e-value: 8.8E-47 score: 158.7
IPR008580	PPPDE peptidase domain	PANTHER	PTHR12378	DESUMOYLATING ISOPEPTIDASE	coord: 4..140
IPR008580	PPPDE peptidase domain	PROSITE	PS51858	PPPDE	coord: 15..146 score: 57.829414
IPR042266	PPPDE peptidase domain superfamily	GENE3D	3.90.1720.30	PPPDE domains	coord: 11..152 e-value: 1.6E-44 score: 153.3
None	No IPR available	PANTHER	PTHR12378:SF52	F23A5.4 PROTEIN	coord: 4..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002174.1	HG10002174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0101005	deubiquitinase activity
molecular_function	GO:0008233	peptidase activity