HG10002167 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002167
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	50S ribosomal protein L1
Location	Chr11: 4138531 .. 4141398 (+)
RNA-Seq Expression	HG10002167
Synteny	HG10002167

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTTCAAGCTCATCCTCACTCACTCTCGCCGCCATTGCCTCGCCAAACCTCCTTCTCTTTCAACTCCCCAGTTCCTTCAATTTCGCAGACCACTCTCCTCCTCTCAATCCGAATCCAACCCAGATCCCGATTCTTCCCCCACTCAATCCTCTTCAAGAACCCCGCGTTCCGTTCCCATTCAGCCTGTCTCCTACGCCATCAAGCCCAAGCCCAAGCCACCATCCGATGAGAACCACGATTCCCCAGAATCGCTTCAATCTCCGCCGGCTCCACAGCGGCCGCCGCCAAGCCCCGAAGGTCCGAGGACGTGGACTCGCCAGGATATTCGCTATATGAAGGATACTCCATCTATAGCTCCGGTATCTTATCCTTTGCGTGTTGCTCCGCTTCCGGAAGATAGGGTTTCGGGTTCTGGCGGAGGAGAAGAGGGTGTGGAGGGTGGGCAAATGGAGGAGGAGAGGAAGAGAATTGAGGCGGAGAACCAGTGGAGGAGGAGGGTTTTTAGGGTTGCCGAGGAGGAGAAAGTTACTGCTCCATTTCCAATGCTGATCAAGGTCGAGAAGAAGGAACAGAATGTAGTTCTTGATTTGATGGACGCTATTCGGCAAGTGAAGGTCAGTGTAAAAGATTGTGATTTTAACTTTTCATGAGAAATTTCTCTACTGCAGACGTTTTTGGAGAACTGAAAGCTGTAGATTGTAGAATATTTGTCTACATAATCTCTGGAGTTGTAAAATGAATGTGCTTTTTCAGAATTTTACTTATGAAATGGTTATTGACAAACTCATTGTTTAATCTTCATTTTTTGTTCCCTTTTTTTTTTCCTCGAAAATCAAGTTCAGGCTACTGCCAAGGGAAACTTTGATGAGACTGTTGAAGCACATGCAAGATTGGGGGTTGATGCTAGGAAAATGGTAATGCATCTATTATTTTTGTACTCTGGATTCTTCTCTCTCAGTAGGAATTAGCTTGAATGATTCTTTTACTAGCCTAGTAACTATGAAATTTTAGGGGAGAAAAGAAACCTGGGAATTTCCTTACTCCACTGGTTGATTGGAATGTGGTACCTGTTAATGGTTCAATTTAAGCTGGCCTTGCAGCTGCACTAGTGTGCGCAATAGAGTTCTCAAAGTAGCTTATCAGAGGGTATATATGCGAATGCTATGATCTTTTGGTAACCATCATGGGTTGGCGTGGTGGTAAAAAAAAGGAGACATAGTCTCAATAAATGGTTAAGAAGTCATGGGTTCAATCCATGGTGGCTACCTACCTAAGAATTAATATCCAACGAGTTTCCTTGACACCTAAATGTTGTAGGGTCAGGCGGGTTGTCCCAAAAAGAAAAAATGATCTTTTGTTTATTTTGTATAACTTCTGAAAGTTATCCACATCCTTGATTTTTAATAAACATGAGATAAAAATGATTTCTTCATTTCTCCTGCTGATTCCGTGCACAATAATATGTCCTTTCCTTCTTCGGTATTCTACGTACTATGTTTTTATCTACTAAAATGTTGTTTCAACTCATGGCTTTCTTTTTCTGAAATACAGCAAGTTCTGGGTAACATGACTCTGCCCCATTCCATTGGGAAGGTAAGCATGTGAATTCTGTTTGAATGAGCATGTCACATTGGAATTCAATATTTTAGTTAATTTGTTGAAAAAATATATATTCCCTTTCAGACTGTCAGAGTGGCTTTCTTTGCTGAAGGGGCTGATGCTGAGGAGGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCGTTGAACTTATAGAGGAAATTGCGAGTAAGAATTGATCCAATTGGGTTTCCTTTTTATTATTAGGGAAATTTTTATTTTCATTCTTGTACTTGTATCTGACTCGATGAATTAAAAATTTTCCTTAAAATTTCAATTTGATCAAATTAAATTAAACCGTAATGTTGAATGAGAGGTGAAATTAGTCCCTTTTAAGGTCTCTCTATATTCTCTAGGATTGTCATGAAAAAATAACAGCTTAAGAAGTTTTGTAGAACGAAGTATCAATTCTTCTTCTTGGATAATCCTTCACATGATATAAAGGTAGTTCAAAATTCAAATAGGCCTAACGAACATGATCAAAAGCTTTGCAAAATCAAGTTGGTCCTGTTAGTTAGATGAACTTGAATTTGAAACTAATCATTGTTTGGGACTTCATTTCTTTAACTATATGTATGCAGCCAGTCGGAAATTCAATGTTGATAAGTGTTTCTCAACCCCTGAAATGATGAGGCGCATTGGCAAGGTTTATGGAATTTAACTTTTTGTGCATTGTACTGTTGTTCTTTGCTGATGGTTGCTTACTCAAGAAGAATATTTTTGTAAAACGTTTACTCAAAGTTTGATGTTATTGCTGTTTAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAAGTGAGCTCATTATCCTCTGTTTCTATGGTATTTATTTGCTTATAGATTGAAATCAAATCAGATGTGCTGATATATTGTATAGCTAGGTACTGTCACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGGAGGACACATGCACTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTAAAATCATTTTATTTTAAAGCATATAGCTTAGTTTTATAAGGAATGCCCATACTGAAGCTGAATTTAAGTTTCCACGAATGTACCCATCTAAATAGCATAAACCGTTTCTTGCAGGTGAGTCATTCGGAAGAGTCCTTACGAGAAAATATTGGGGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGCTGGCTTGAAAAAAGGCAAGTTGTGTCTCTTAGTTTTTTTGCTACTCTGTAGTTGA

mRNA sequence

ATGGCAGTTTTCAAGCTCATCCTCACTCACTCTCGCCGCCATTGCCTCGCCAAACCTCCTTCTCTTTCAACTCCCCAGTTCCTTCAATTTCGCAGACCACTCTCCTCCTCTCAATCCGAATCCAACCCAGATCCCGATTCTTCCCCCACTCAATCCTCTTCAAGAACCCCGCGTTCCGTTCCCATTCAGCCTGTCTCCTACGCCATCAAGCCCAAGCCCAAGCCACCATCCGATGAGAACCACGATTCCCCAGAATCGCTTCAATCTCCGCCGGCTCCACAGCGGCCGCCGCCAAGCCCCGAAGGTCCGAGGACGTGGACTCGCCAGGATATTCGCTATATGAAGGATACTCCATCTATAGCTCCGGTATCTTATCCTTTGCGTGTTGCTCCGCTTCCGGAAGATAGGGTTTCGGGTTCTGGCGGAGGAGAAGAGGGTGTGGAGGGTGGGCAAATGGAGGAGGAGAGGAAGAGAATTGAGGCGGAGAACCAGTGGAGGAGGAGGGTTTTTAGGGTTGCCGAGGAGGAGAAAGTTACTGCTCCATTTCCAATGCTGATCAAGGTCGAGAAGAAGGAACAGAATGTAGTTCTTGATTTGATGGACGCTATTCGGCAAGTGAAGGCTACTGCCAAGGGAAACTTTGATGAGACTGTTGAAGCACATGCAAGATTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCCCATTCCATTGGGAAGACTGTCAGAGTGGCTTTCTTTGCTGAAGGGGCTGATGCTGAGGAGGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCGTTGAACTTATAGAGGAAATTGCGACCAGTCGGAAATTCAATGTTGATAAGTGTTTCTCAACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTCACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGGAGGACACATGCACTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTCCTTACGAGAAAATATTGGGGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGCTGGCTTGAAAAAAGGCAAGTTGTGTCTCTTAGTTTTTTTGCTACTCTGTAGTTGA

Coding sequence (CDS)

ATGGCAGTTTTCAAGCTCATCCTCACTCACTCTCGCCGCCATTGCCTCGCCAAACCTCCTTCTCTTTCAACTCCCCAGTTCCTTCAATTTCGCAGACCACTCTCCTCCTCTCAATCCGAATCCAACCCAGATCCCGATTCTTCCCCCACTCAATCCTCTTCAAGAACCCCGCGTTCCGTTCCCATTCAGCCTGTCTCCTACGCCATCAAGCCCAAGCCCAAGCCACCATCCGATGAGAACCACGATTCCCCAGAATCGCTTCAATCTCCGCCGGCTCCACAGCGGCCGCCGCCAAGCCCCGAAGGTCCGAGGACGTGGACTCGCCAGGATATTCGCTATATGAAGGATACTCCATCTATAGCTCCGGTATCTTATCCTTTGCGTGTTGCTCCGCTTCCGGAAGATAGGGTTTCGGGTTCTGGCGGAGGAGAAGAGGGTGTGGAGGGTGGGCAAATGGAGGAGGAGAGGAAGAGAATTGAGGCGGAGAACCAGTGGAGGAGGAGGGTTTTTAGGGTTGCCGAGGAGGAGAAAGTTACTGCTCCATTTCCAATGCTGATCAAGGTCGAGAAGAAGGAACAGAATGTAGTTCTTGATTTGATGGACGCTATTCGGCAAGTGAAGGCTACTGCCAAGGGAAACTTTGATGAGACTGTTGAAGCACATGCAAGATTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCCCATTCCATTGGGAAGACTGTCAGAGTGGCTTTCTTTGCTGAAGGGGCTGATGCTGAGGAGGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCGTTGAACTTATAGAGGAAATTGCGACCAGTCGGAAATTCAATGTTGATAAGTGTTTCTCAACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTCACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGGAGGACACATGCACTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTCCTTACGAGAAAATATTGGGGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGCTGGCTTGAAAAAAGGCAAGTTGTGTCTCTTAGTTTTTTTGCTACTCTGTAGTTGA

Protein sequence

MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSVPIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSIAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTAPFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLPHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLLAKPAGLKKGKLCLLVFLLLCS

Homology

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BLAST of HG10002167 vs. NCBI nr
Match: XP_038877977.1 (50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal protein L1 [Benincasa hispida])

HSP 1 Score: 657.1 bits (1694), Expect = 9.3e-185
Identity = 353/381 (92.65%), Postives = 357/381 (93.70%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MAVFKLILT SRRH LAKPPSLSTPQFLQFRRPLSSSQSESNPDPDS   QSS RTPRSV
Sbjct: 1   MAVFKLILTQSRRHRLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSPHNQSSPRTPRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYA+KPKP+  SDEN DSPESLQSPPA  RPPPSP G RTWTR+DIRYMKD PSI
Sbjct: 61  PIQPVSYAVKPKPQ--SDENQDSPESLQSPPATPRPPPSPAGRRTWTREDIRYMKDNPSI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           A VSYPLRVAPLPEDRVS SGGGEEGVE GQMEEERKRIEAENQWRR  FRV EEEKVTA
Sbjct: 121 ASVSYPLRVAPLPEDRVSASGGGEEGVESGQMEEERKRIEAENQWRRS-FRVLEEEKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQ VVL+LMDAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLELMDAIRQVKANAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVT DIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEESL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTGDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           RENIGAFVNALLLAKPAGLKK
Sbjct: 361 RENIGAFVNALLLAKPAGLKK 378

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BLAST of HG10002167 vs. NCBI nr
Match: KAG6581968.1 (hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018387.1 rplA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 642.9 bits (1657), Expect = 1.8e-180
Identity = 341/381 (89.50%), Postives = 356/381 (93.44%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPRS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRSA 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYAIKPKP+  SD++HDSPES Q P AP+RPPPSPEG RTWTR+DIRYMKDTP+I
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           APVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVTA
Sbjct: 121 APVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEESL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           RENIGAFVNALLLAKP GLKK
Sbjct: 361 RENIGAFVNALLLAKPVGLKK 378

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BLAST of HG10002167 vs. NCBI nr
Match: XP_022955665.1 (uncharacterized protein LOC111457596 [Cucurbita moschata])

HSP 1 Score: 642.5 bits (1656), Expect = 2.4e-180
Identity = 340/381 (89.24%), Postives = 356/381 (93.44%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPRS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRSA 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYAIKPKP+  SD++HDSPES Q P AP+RPPPSPEG RTWTR+DIRYMKDTP+I
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           APVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVTA
Sbjct: 121 APVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEESL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           REN+GAFVNALLLAKP GLKK
Sbjct: 361 RENVGAFVNALLLAKPVGLKK 378

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BLAST of HG10002167 vs. NCBI nr
Match: XP_023528928.1 (uncharacterized protein LOC111791701 [Cucurbita pepo subsp. pepo] >XP_023528929.1 uncharacterized protein LOC111791701 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636.3 bits (1640), Expect = 1.7e-178
Identity = 340/382 (89.01%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPR  
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRPA 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQR-PPPSPEGPRTWTRQDIRYMKDTPS 120
           PIQPVSYAIKPKP+  SD++HDSPES Q P AP+R PPPSPEG RTWTR+DIRYMKDTP+
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDHDSPESPQPPSAPRRPPPPSPEGRRTWTREDIRYMKDTPT 120

Query: 121 IAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVT 180
           IAPVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVT
Sbjct: 121 IAPVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVT 180

Query: 181 APFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTL 240
           APFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTL
Sbjct: 181 APFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTL 240

Query: 241 PHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRI 300
           PHSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRI
Sbjct: 241 PHSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRI 300

Query: 301 GKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEES 360
           GKISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEES
Sbjct: 301 GKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEES 360

Query: 361 LRENIGAFVNALLLAKPAGLKK 382
           LRENIGAFVNALLLAKP GLKK
Sbjct: 361 LRENIGAFVNALLLAKPVGLKK 379

[Close]

BLAST of HG10002167 vs. NCBI nr
Match: XP_022980111.1 (uncharacterized protein LOC111479599 [Cucurbita maxima] >XP_022980112.1 uncharacterized protein LOC111479599 [Cucurbita maxima])

HSP 1 Score: 632.9 bits (1631), Expect = 1.9e-177
Identity = 337/381 (88.45%), Postives = 354/381 (92.91%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPRSV
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYAIKPKP+  SD++ DSPES Q P AP+RPPPS EG  TWTR+DIRYMKDTPSI
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDRDSPESPQPPSAPRRPPPSSEGRTTWTREDIRYMKDTPSI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           APVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVTA
Sbjct: 121 APVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTV+VAFFA+GADAEEARAAGADIVGGVELI+EIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFADGADAEEARAAGADIVGGVELIQEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSE+ L
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEDLL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           RENIGAFVNALLLAKPAGLKK
Sbjct: 361 RENIGAFVNALLLAKPAGLKK 378

[Close]

BLAST of HG10002167 vs. ExPASy Swiss-Prot
Match: A4WVL9 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=rplA PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-43
Identity = 91/187 (48.66%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 196 VLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVRVAFFA 255
           ++ + DA+  +K  A   FDET+E    LGVD R     V G +TLP+  GKTVRVA FA
Sbjct: 20  MVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFA 79

Query: 256 EGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLP 315
            GA A+EA+AAGADIVG  +L+E I  S K   D+C +TP+MM  +G++ KIL  R L+P
Sbjct: 80  RGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMP 139

Query: 316 DPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLL 375
           +PK+GTVT D+ GA+  A+GG + FK++   ++H G+GK+S   E L +N+ AFV+A+  
Sbjct: 140 NPKVGTVTMDVAGAVGNAKGGEVQFKVEKAGVIHAGVGKISFDAEKLAQNVRAFVDAVNR 199

Query: 376 AKPAGLK 381
           AKPAG K
Sbjct: 200 AKPAGAK 205

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BLAST of HG10002167 vs. ExPASy Swiss-Prot
Match: A3PGI6 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=rplA1 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 196 VLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVRVAFFA 255
           ++ + DA+  +K  A   FDET+E    LGVD R     V G +TLP+  GKTVRVA FA
Sbjct: 20  LISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFA 79

Query: 256 EGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLP 315
            GA A+EA+AAGADIVG  +L+E I  S K   D+C +TP+MM  +G++ KIL  R L+P
Sbjct: 80  RGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMP 139

Query: 316 DPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLL 375
           +PK+GTVT D+K A++ A+GG + FK++   ++H G+GK+S   + L +N+ AFV+A+  
Sbjct: 140 NPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAVNR 199

Query: 376 AKPAGLK 381
           AKPAG K
Sbjct: 200 AKPAGAK 205

[Close]

BLAST of HG10002167 vs. ExPASy Swiss-Prot
Match: Q3J5T3 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=rplA PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 196 VLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVRVAFFA 255
           ++ + DA+  +K  A   FDET+E    LGVD R     V G +TLP+  GKTVRVA FA
Sbjct: 20  LISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFA 79

Query: 256 EGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLP 315
            GA A+EA+AAGADIVG  +L+E I  S K   D+C +TP+MM  +G++ KIL  R L+P
Sbjct: 80  RGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMP 139

Query: 316 DPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLL 375
           +PK+GTVT D+K A++ A+GG + FK++   ++H G+GK+S   + L +N+ AFV+A+  
Sbjct: 140 NPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAVNR 199

Query: 376 AKPAGLK 381
           AKPAG K
Sbjct: 200 AKPAGAK 205

[Close]

BLAST of HG10002167 vs. ExPASy Swiss-Prot
Match: B9KL80 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=rplA PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 196 VLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVRVAFFA 255
           ++ + DA+  +K  A   FDET+E    LGVD R     V G +TLP+  GKTVRVA FA
Sbjct: 20  LISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFA 79

Query: 256 EGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLP 315
            GA A+EA+AAGADIVG  +L+E I  S K   D+C +TP+MM  +G++ KIL  R L+P
Sbjct: 80  RGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMP 139

Query: 316 DPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLL 375
           +PK+GTVT D+K A++ A+GG + FK++   ++H G+GK+S   + L +N+ AFV+A+  
Sbjct: 140 NPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAVNR 199

Query: 376 AKPAGLK 381
           AKPAG K
Sbjct: 200 AKPAGAK 205

[Close]

BLAST of HG10002167 vs. ExPASy Swiss-Prot
Match: B1ZFX0 (50S ribosomal protein L1 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) OX=441620 GN=rplA PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.7e-43
Identity = 91/182 (50.00%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 201 DAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVRVAFFAEGADA 260
           +AI+ VK+ A   FDETVE    LGVD R     V G   LP+  G+TVRVA FA GA A
Sbjct: 25  EAIKLVKSKASAKFDETVEISMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFARGAKA 84

Query: 261 EEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKISKILRQRGLLPDPKLG 320
           ++A+AAGADIVG  +L+ EI    K   D+C +TP++M  +G++ K+L  RGL+P+PK+G
Sbjct: 85  DDAKAAGADIVGAEDLL-EIVQGGKIEFDRCIATPDLMPLVGRLGKVLGPRGLMPNPKVG 144

Query: 321 TVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRENIGAFVNALLLAKPAG 380
           TVT D+KGA+  A+GG + F+++   I+H G+GKVS  E+ L ENI AF +A+  AKPAG
Sbjct: 145 TVTMDVKGAVAAAKGGAVEFRVEKAGIIHAGVGKVSFDEQKLVENIKAFADAVAKAKPAG 204

[Close]

BLAST of HG10002167 vs. ExPASy TrEMBL
Match: A0A6J1GVQ7 (uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC111457596 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.2e-180
Identity = 340/381 (89.24%), Postives = 356/381 (93.44%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPRS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRSA 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYAIKPKP+  SD++HDSPES Q P AP+RPPPSPEG RTWTR+DIRYMKDTP+I
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           APVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVTA
Sbjct: 121 APVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEESL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           REN+GAFVNALLLAKP GLKK
Sbjct: 361 RENVGAFVNALLLAKPVGLKK 378

[Close]

BLAST of HG10002167 vs. ExPASy TrEMBL
Match: A0A6J1ISN8 (uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 9.1e-178
Identity = 337/381 (88.45%), Postives = 354/381 (92.91%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MA+FKLILT SRRHCLAK PSLSTPQFLQFRR LSSSQSESNPDPDS P + SSRTPRSV
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNE-SSRTPRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPSI 120
           PIQPVSYAIKPKP+  SD++ DSPES Q P AP+RPPPS EG  TWTR+DIRYMKDTPSI
Sbjct: 61  PIQPVSYAIKPKPQ--SDQDRDSPESPQPPSAPRRPPPSSEGRTTWTREDIRYMKDTPSI 120

Query: 121 APVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKVTA 180
           APVSYP RVAPLPEDRVS SGGGEEGVE  QMEEERK+IEAE  WRRRVFRVAEE+KVTA
Sbjct: 121 APVSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTA 180

Query: 181 PFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPM+IKV+KKE  VVLDLMDAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIG 300
           HSIGKTV+VAFFA+GADAEEARAAGADIVGGVELI+EIATSRKFNVDKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFADGADAEEARAAGADIVGGVELIQEIATSRKFNVDKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSE+ L
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEDLL 360

Query: 361 RENIGAFVNALLLAKPAGLKK 382
           RENIGAFVNALLLAKPAGLKK
Sbjct: 361 RENIGAFVNALLLAKPAGLKK 378

[Close]

BLAST of HG10002167 vs. ExPASy TrEMBL
Match: A0A5D3E127 (50S ribosomal protein L1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002270 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.9e-176
Identity = 336/386 (87.05%), Postives = 351/386 (90.93%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MAV KLILTH+RRH  AKPPSLSTPQFL FRR LSSSQS+SNPDP+S P QSS RT RSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQ--RPPPSPEGPRTWTRQDIRYMKDTP 120
           PIQPVSYA+KPKP+  +DEN DSPE LQSPP PQ   PPP PEG RTWTR+D+RYMKD+P
Sbjct: 61  PIQPVSYAVKPKPE--ADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSP 120

Query: 121 SIAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKV 180
           SI PVSY  RVAPLPED  +GSGGGEEGV  GQMEEERK+IEA NQWRRRV RV EE+KV
Sbjct: 121 SITPVSYATRVAPLPED--TGSGGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKV 180

Query: 181 TAPFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMT 240
           TAPFPMLIKVEKKEQ VVLDL DAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMT
Sbjct: 181 TAPFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMT 240

Query: 241 LPHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRR 300
           LPHSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIE+IA+SRKFN DKCFSTPEMMRR
Sbjct: 241 LPHSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRR 300

Query: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEE 360
           IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEE
Sbjct: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE 360

Query: 361 SLRENIGAFVNALLLAKPAGLKKGKL 385
            LRENIGAFVNALLLAKPAGLKKGKL
Sbjct: 361 FLRENIGAFVNALLLAKPAGLKKGKL 382

[Close]

BLAST of HG10002167 vs. ExPASy TrEMBL
Match: A0A1S3BZ70 (50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.6e-174
Identity = 333/383 (86.95%), Postives = 348/383 (90.86%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MAV KLILTH+RRH  AKPPSLSTPQFL FRR LSSSQS+SNPDP+S P QSS RT RSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQ--RPPPSPEGPRTWTRQDIRYMKDTP 120
           PIQPVSYA+KPKP+  +DEN DSPE LQSPP PQ   PPP PEG RTWTR+D+RYMKD+P
Sbjct: 61  PIQPVSYAVKPKPE--ADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSP 120

Query: 121 SIAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKV 180
           SI PVSY  RVAPLPED  +GSGGGEEGV  GQMEEERK+IEA NQWRRRV RV EE+KV
Sbjct: 121 SITPVSYATRVAPLPED--TGSGGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKV 180

Query: 181 TAPFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMT 240
           TAPFPMLIKVEKKEQ VVLDL DAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMT
Sbjct: 181 TAPFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMT 240

Query: 241 LPHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRR 300
           LPHSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIE+IA+SRKFN DKCFSTPEMMRR
Sbjct: 241 LPHSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRR 300

Query: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEE 360
           IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEE
Sbjct: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE 360

Query: 361 SLRENIGAFVNALLLAKPAGLKK 382
            LRENIGAFVNALLLAKPAGLKK
Sbjct: 361 FLRENIGAFVNALLLAKPAGLKK 379

[Close]

BLAST of HG10002167 vs. ExPASy TrEMBL
Match: A0A1S4DZR3 (50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.6e-174
Identity = 333/383 (86.95%), Postives = 348/383 (90.86%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRTPRSV 60
           MAV KLILTH+RRH  AKPPSLSTPQFL FRR LSSSQS+SNPDP+S P QSS RT RSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQ--RPPPSPEGPRTWTRQDIRYMKDTP 120
           PIQPVSYA+KPKP+  +DEN DSPE LQSPP PQ   PPP PEG RTWTR+D+RYMKD+P
Sbjct: 61  PIQPVSYAVKPKPE--ADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSP 120

Query: 121 SIAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFRVAEEEKV 180
           SI PVSY  RVAPLPED  +GSGGGEEGV  GQMEEERK+IEA NQWRRRV RV EE+KV
Sbjct: 121 SITPVSYATRVAPLPED--TGSGGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKV 180

Query: 181 TAPFPMLIKVEKKEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVLGNMT 240
           TAPFPMLIKVEKKEQ VVLDL DAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMT
Sbjct: 181 TAPFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMT 240

Query: 241 LPHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRR 300
           LPHSIGKTV+VAFFAEGADAEEARAAGADIVGGVELIE+IA+SRKFN DKCFSTPEMMRR
Sbjct: 241 LPHSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRR 300

Query: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEE 360
           IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAR GHMHFKMDSTSIVHVGLGKVSHSEE
Sbjct: 301 IGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE 360

Query: 361 SLRENIGAFVNALLLAKPAGLKK 382
            LRENIGAFVNALLLAKPAGLKK
Sbjct: 361 FLRENIGAFVNALLLAKPAGLKK 379

[Close]

BLAST of HG10002167 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-96
Identity = 203/387 (52.45%), Postives = 268/387 (69.25%), Query Frame = 0


Query: 1   MAVFKLILTHSRRHCLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSSPTQSSSRT-PRS 60
           MA  KL+L+ +RR  L KP S    Q  +     SSS S S+   DS+P+  S+ +  ++
Sbjct: 1   MAAMKLLLSQARRQGLIKPFSSPFQQIPRLFSSSSSSSSSSSSSSDSNPSPDSNESRKKA 60

Query: 61  VPIQPVSYAIKPKPKPPSDENHDSPESLQSPPAPQRPPPSPEGPRTWTRQDIRYMKDTPS 120
           V I+PVSYA KPK +    +N +S E+LQSP +             WTR++IRY+KD+PS
Sbjct: 61  VTIEPVSYAAKPKDQKSEPKNVESTENLQSPES-----------ANWTREEIRYVKDSPS 120

Query: 121 IAPVSYPLRVAPLPEDRVSGSGGGEEGVEGGQMEEERKRIEAENQWRRRVFR--VAEEEK 180
           I PVSY  RVAPLPEDRV+G   G+   E  +ME ERKRIE EN+ RRR  R    EE+ 
Sbjct: 121 INPVSYAQRVAPLPEDRVAGENEGDRTPE--EMERERKRIELENRARRRFLRANAVEEDT 180

Query: 181 VTAPFPMLIKVEKKE-QNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDARKMQVL-- 240
            + P P L+K E K  +  + DLM+AIR++K  AK  FDET+EAH RLG++  + +++  
Sbjct: 181 SSLPLPTLLKPELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVR 240

Query: 241 GNMTLPHSIGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPE 300
           G + LPHS+ K V+VAFFAEGADAE+A+AAGAD+VGG+ELIEEI  S K + D+C +TP+
Sbjct: 241 GTLALPHSVKKDVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPK 300

Query: 301 MMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVS 360
           MM R+ KIS+IL   GL+P+PK G+VT D+  A+K A+ GH  F+MD TSI+HV LGK+S
Sbjct: 301 MMPRVYKISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMS 360

Query: 361 HSEESLRENIGAFVNALLLAKPAGLKK 382
            SEE+LREN+GAF+NALLLAKPAGLKK
Sbjct: 361 FSEEALRENVGAFMNALLLAKPAGLKK 374

[Close]

BLAST of HG10002167 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-32
Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 186 IKVEK-KEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHS 245
           ++++K +E     D+  AI  +K TA   F E+VEAH RL +D +    Q+   ++LP  
Sbjct: 117 LEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKG 176

Query: 246 IGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 305
            G+TV VA  A+G   +EA++AGADIVG  +LIE+I        DK  ++P+MM ++  +
Sbjct: 177 TGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQI-KGGFMEFDKLIASPDMMVKVAGL 236

Query: 306 SKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKVSHSEESLRE 365
            KIL  RGL+P+PK GTVT++I  A+++ + G + F+ D T IVH+  GKV+ +EE L  
Sbjct: 237 GKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLI 296

Query: 366 NIGAFVNALLLAKPAGLK 381
           N  A V ++   KP G K
Sbjct: 297 NFLAAVKSVETNKPKGAK 313

[Close]

BLAST of HG10002167 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-22
Identity = 64/171 (37.43%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 186 IKVEK-KEQNVVLDLMDAIRQVKATAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHS 245
           ++++K +E     D+  AI  +K TA   F E+VEAH RL +D +    Q+   ++LP  
Sbjct: 117 LEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKG 176

Query: 246 IGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 305
            G+TV VA  A+G   +EA++AGADIVG  +LIE+I        DK  ++P+MM ++  +
Sbjct: 177 TGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQI-KGGFMEFDKLIASPDMMVKVAGL 236

Query: 306 SKILRQRGLLPDPKLGTVTSDIKGALKKARGGHMHFKMDSTSIVHVGLGKV 354
            KIL  RGL+P+PK GTVT++I    + +R G ++ +     +    LGK+
Sbjct: 237 GKILGPRGLMPNPKAGTVTANIP---QSSRRGKLNSEQTKLGLFTFHLGKL 283

The following BLAST results are available for this feature:

BLAST of HG10002167 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877977.1	9.3e-185	92.65	50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal prote...	[more]
KAG6581968.1	1.8e-180	89.50	hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022955665.1	2.4e-180	89.24	uncharacterized protein LOC111457596 [Cucurbita moschata]	[more]
XP_023528928.1	1.7e-178	89.01	uncharacterized protein LOC111791701 [Cucurbita pepo subsp. pepo] >XP_023528929....	[more]
XP_022980111.1	1.9e-177	88.45	uncharacterized protein LOC111479599 [Cucurbita maxima] >XP_022980112.1 uncharac...	[more]

BLAST of HG10002167 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4WVL9	1.3e-43	48.66	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4...	[more]
A3PGI6	2.8e-43	48.13	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4...	[more]
Q3J5T3	2.8e-43	48.13	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158...	[more]
B9KL80	2.8e-43	48.13	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) ...	[more]
B1ZFX0	3.7e-43	50.00	50S ribosomal protein L1 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13...	[more]

BLAST of HG10002167 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVQ7	1.2e-180	89.24	uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1ISN8	9.1e-178	88.45	uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599...	[more]
A0A5D3E127	2.9e-176	87.05	50S ribosomal protein L1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BZ70	1.6e-174	86.95	50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]
A0A1S4DZR3	1.6e-174	86.95	50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]

BLAST of HG10002167 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42710.1	1.3e-96	52.45	Ribosomal protein L1p/L10e family	[more]
AT3G63490.1	3.9e-32	40.40	Ribosomal protein L1p/L10e family	[more]
AT3G63490.2	3.7e-22	37.43	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 199..381 e-value: 5.3E-61 score: 207.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..61
None	No IPR available	PANTHER	PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	coord: 10..382
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 242..334 e-value: 5.3E-61 score: 207.7
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 207..380 e-value: 2.5E-32 score: 112.3
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 199..383 e-value: 1.10064E-46 score: 156.961
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 188..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002167.1	HG10002167.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003729	mRNA binding