HG10002141 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002141
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein NEOXANTHIN-DEFICIENT 1
Location	Chr11: 3890494 .. 3895605 (-)
RNA-Seq Expression	HG10002141
Synteny	HG10002141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGGAGAGAAAAATTGTTCATCAGGCTATGGCAAACCTCCATGGATATTTAGAGGAAGGTTATATTGAAAACCCTCCATTTACTTTTTTATATATTTTTTTCTTTTTTTTTTCTTGTATTTGACATTCCCCCATTACTCAGGGCCTTGTATCAACTGCATCTTGTGAAGGCTAAAACTGCTCGAGCATGTATTCCCAAGGAGTTAAGACTCGTTGAAGCATTTGGGTATTCTTTAATCACTAAGAATTAGGAGATTAATGTGTTGGATTAATGAAATGTGATCCGATTGAAATGATTTAGTAATGTAATTGTTTAGTGCTTACTTAAAATCCCTCTTCAGTTATACTCTTGGTGGGTTTTTTCTTGCAAACTATGAAGACAGTCCAGCAGGAACTTTTGATGAGGTCTGATTTTTTGCCTTTTTTCTTATTGTGGCTAAAACAGTGGAGATTTGGTGTTTTTGCTGATATAGAATCCATATTTTGGTTGGCAGCTTGTAGTAATTTCTGGAATTGTTTGGAATCGTCCAACCTCTTGCGCGTATGTTTTTTCTATTTCCATTGATGATGAGGGGAAAAGAGATTATGGTTATATTGTGGTGAATGTTAGTGGGATAATTTTGTAATTTTGTTTGCTTGATTAGTTTAACAATGTCCTGATTGAACCGGATATTTAGTGGACTTGGTTTTTCTTTTGGACCGGCTTGGGTTTGGTCTAGACTGTTGGTTGCAGAGGAGGGATTGGTCTTGGTTTTCATTTTGCTCAAACGTTTGGATGATCTGTAGAAATAAGATAAAAGGGGTTTTCAAAAACATTGAATTTGGGAAGACCCATGTCTTTTTTTTATTATTATTATTATTTTTACTTTGGTTTTCTTTTCTGAAGCAGATGGGCAGCTAAGGTTTTAGTGAACAGTGTTGATGCTTGTGATCATGGAAGAAAGGTATGGAAATTGAAGGATTGTTGTTGTTGATTTCTGAGGCTTGATTTGTATGGAATTTTGAAACAAATATTTGTGAACTTGTTACCATGTCATGTCTGTTTCTATGGTAATTTGAAGATTCTGAATATTGTTTGCTCTTCATCTGTCTTATAGCCTCTTCTATGACTGGATTTTCTTTCTGTCTCATATTTTACCATTCTTTACCCCAAGGGATATGTCATAGCTCTGTAGAAATGGTGCTTCGCTTACAATGTATTACTTTACCCAAGACACTCATATGCCATGTTCTTGGTTTTTCCAATGTGAAATATGAAAAGTTTTTTAAATTTCATGGTACACATGGTAGAGCCTAGTAGAAATGGTACTTATAATGTATTACTTTAGGGTTCATTGTATAGATGACCCATTTGATAAGGTCCAAATGAAATCTAACTCACCCTCTAAAAACATAAGTTTTATAACCTTGCGTCATCACAAAGTGAAATTACGGAATTGACCCCATTGTATACATGTTCTAATACTCAACTCTCGCTACTTGCTACTAGTTCCTTTTTTTTTTCTTTTCCTCATTAATGTAATTCTAATTTCTCTTTCCCTTTTTTTTCTTTTTTGGTTGTGAATTCTAACTACTCGCTACTCAGTATGTTTGTAGGATGGAAAACTTAAAAAAGTGTTGAAGAAAAAGAAAAGAAAATTCAATGAGTAACAAGAGCAAGTAGCGAGAATCGAGAGTATCAACACGCGTACACAGTAGGATGATTGTGTAATCTCACTTAAGCAAAAGGTCATAAAATTTACCTTTTAAAAAGGTAGGTCAGATTTCATTTGGGCCTTGTCAAAAGGGTCCGCACTTCCATATTCTCATTACTTTGCCCAAGACGCCGATTTTTTCACTGGCTCATCATTTTATAATACTTTAGGTGCCACTAAAATTTAGTTTCTATTTGGAATGATTTTTTGAGTACTTAAAAAAGTGTTTTTAAGCACTTGGTCATTCCAAACAGGTCCTTCATTGTCTTAGTTCTAACTTTCCAAGGTGATAACATAACAAATTACCCAGCCCCTAGAAGAGGATTGTATTTGCCTTCCACCTGTCAATATACATAAGTTTTCACCACCACATGTTAGCCAAAATTTTATGGCAATGATAGCCCATACTTCTCTCCTAAGTTAATCTTGTAGCTTAAAAGTTTTCTTAAAAAGGAATTAATGAAAATCAACTAACCAACAAGAGTACTCAATAGAACAAGTGATTATTTTACTTATCTTATGAAACAAATTAAATTATTTAAAGATCCTCATTACTAGACTCCTTTAGATAAGCTCAACTAAGAAAGGTAGTCATCCTTTATTCTTAGACGTCAAGAAATCCAAAAATCTTTATTTTTTGTGCATTCAAATGTACAGGTGCTCAATCTCTCTGGGAGTTTGAGACTCTCCTATCGATATAATAACCATTTTGATCGTTTGTGATGGATGATGTGTGATATTCGATTGTTCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTCTCTTGTCTATTAACCTTAATTGCATTCTTCTCTGGCAGGAAGTAGGGCTTCCAAGTCAAGTTGCTAGGTTTACAAAAGTAAGCTACAATTTTACATAATATGGTTTTTCAATATTTAATTCCTGGATACATGTTTGATCAATGTTATATTGTTGTGACCACTCACAAGAATCATTCTTCTCAATAATCATCTGACCTCCAAAGTAACAATATACTTCTCATCAGCTAGGATTCACTCTATTATGGTCTATATATACATTTTTTTGACATTTTGGGCAACATCAACCAGAACTAGTATATTGAATGGGAACGATGTCTCTCGTGAAAACAGAGGATTGAGGCAGTTCCGATGCGTCAGAGTGAAAGAGGACTTCTCAACTCCTTACGTGGAAATAGTAATATCTACGACCAAAAGAGTCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGGTGAGCTGCTATTGCTTAATACTTCTTGTGAAAGCAAAAAAAATAGCCCTGCTCATTTCATCCACTGTTCACCCACTTTGATTTGTTCCTCATATTTCTTCTACCATTGTCTTCATATTCTTATCATCTGATTGAGTTTTGTTGATCTTCTTAGGAAAGTTGTCTTAAATCATTAATTGATCCAAAAGCTTAAGCATATGGGTGAAGGTAAAATTAATATCATATCAACACTCTAACACTGCTCCTCACTTGTGGGTGTGAAATTTGTAGAAGATCCAATAAGTGAAAATTAATATTAAATGGAGAGTAAATGACATTACAAGGTTCGAATATAGGACCTCCTGTTCTTACACCATGTTAAATCACCGATTGGTCCAAAAGGTTAAGCTGAAAGGTTGCAGTAAATTTAATTACATCAGCACTTTAACAAGTTGCATCACTAACATTTAATATTCTGAAAACTTAAGTGCTCTAGGATTGTTGTCAAACAAAGTCCCGCTCTTTGCTTGTATGTCTTGGTGGTTATATCTTCCATGTTGCATTGAATATATCTGTGATAATCTTTGTTGTTGACGTGGGACATTAAACACGGAAGAATAACCATAAAATAGGATGCCCTACATAAAAAAGGTTAGTTATTTTTTTAGGGTTTGTTTAGGACGTTAAATTGGTTATTATAGTTCGTGTTTATTATAGTATGTGGGTAATAATAGTCTGTGTTTGGGTATACACTAAATAGTATGGGTTACAAATAAAGAGAGATGATGGTTACAAAATAGTAAAAACCGTAGACAATAAGGGTTTTTAAATAGTTTTACTATAGCTAAATGTGGGTTATATAATTGGGAACTTCAACTATTATAATAGGAGATCCTTATAACCTACTCCATCTAAGGCAAATTGGGCCAAACGAACCCCTTAGTGGTTGATATAACATGTTCTATATCTTCTAATTTCAGAGATTAGTGGGCAGTTCTTTTAGTAGTTGCAAGTTATTGTTGTTGTAGTTTTTACCCATTAGTGCTTTAGTTGATACTCGTTTTTTTTAGCCTATATGTGAGTCCAAATGTTCGGAGCTCTTTGCTTCTGTTCCTGTTATTGGTAAGCAACTAGCTAGTAATACTCTTTGTAAAACAATATAGATAGAAAACAACTTTACTCTGTTCCGACATTGAGGGGGTTGGAGACTTCCCACAAAATGATTCTACTAGCTTAACTCTCTCTTTATGCCTCCCAACCACATACTTTTGACCAACTAGTAGCGATGGCCTCACTGTGCTCACTAAATATACTCTCCGACAGCTAACCAACCCTATCCTGGCTCTGATTTCAATGTGTATTTCCCCGCCTCCTCTTCCTCGAACACGTTAACGGCGTATGGGTTGCTTGTTGAGCCTATCACAGTGGTTCATGAACTTTTCTTTTCCTAGTTCCAACTTTCAAGGAGTAGTAACTTCTTTTAATTGGATTTTTTTGTTCAAATAGAATGGCCCTTGTGTTTCTGATAACAAGCTGATGTTGGCAGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCTCTCCCAAGTTATAGGTAACCGAATCTTCCAATTTACAAATGGTTATATTTGCCAAATTCGCAATTAATTGACTTGTAACAGTTTCATTGTTCTAAAATATCAGTGGATATACAGAATATACTCCTGAACTACTCAAATATTCCTGCCAAATTCAATGCCGGTTTGTGTTTCTGTTCTCTGATGTTTAACTCTTATCTATCATCACACCTAAGGAATTGAGTTTGTTTAGTGGTGGGTTTCAAATGAAAACTGTTTTTTATGACTCGAGGGGAAACTGTTTAAAACAGTCAAGTTTAATATTTCTTTGAATTGAAGCATTTGAATATATTATTTGCATTTAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTCAAACTTCCCACATCTATCGACAGAGCACAAGATCGAGACCACCATGCTGGGGAAGATGCAGAACATGAACAAAGCCTCTGTACATCTGTTCTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCGCTGTTGTTTCTCAATATTTTAAACACTCTCTCAGAACACCATGA

mRNA sequence

ATGGAAGTTGGAGAGAAAAATTGTTCATCAGGCTATGGCAAACCTCCATGGATATTTAGAGGAAGGGCCTTGTATCAACTGCATCTTGTGAAGGCTAAAACTGCTCGAGCATGTATTCCCAAGGAGTTAAGACTCGTTGAAGCATTTGGTTATACTCTTGGTGGGTTTTTTCTTGCAAACTATGAAGACAGTCCAGCAGGAACTTTTGATGAGCTTGTAGTAATTTCTGGAATTGTTTGGAATCGTCCAACCTCTTGCGCATGGGCAGCTAAGGTTTTAGTGAACAGTGTTGATGCTTGTGATCATGGAAGAAAGGAAGTAGGGCTTCCAAGTCAAGTTGCTAGGTTTACAAAAAGGATTGAGGCAGTTCCGATGCGTCAGAGTGAAAGAGGACTTCTCAACTCCTTACGTGGAAATAGTAATATCTACGACCAAAAGAGTCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCTCTCCCAAGTTATAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTCAAACTTCCCACATCTATCGACAGAGCACAAGATCGAGACCACCATGCTGGGGAAGATGCAGAACATGAACAAAGCCTCTGTACATCTGTTCTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCGCTGTTGTTTCTCAATATTTTAAACACTCTCTCAGAACACCATGA

Coding sequence (CDS)

ATGGAAGTTGGAGAGAAAAATTGTTCATCAGGCTATGGCAAACCTCCATGGATATTTAGAGGAAGGGCCTTGTATCAACTGCATCTTGTGAAGGCTAAAACTGCTCGAGCATGTATTCCCAAGGAGTTAAGACTCGTTGAAGCATTTGGTTATACTCTTGGTGGGTTTTTTCTTGCAAACTATGAAGACAGTCCAGCAGGAACTTTTGATGAGCTTGTAGTAATTTCTGGAATTGTTTGGAATCGTCCAACCTCTTGCGCATGGGCAGCTAAGGTTTTAGTGAACAGTGTTGATGCTTGTGATCATGGAAGAAAGGAAGTAGGGCTTCCAAGTCAAGTTGCTAGGTTTACAAAAAGGATTGAGGCAGTTCCGATGCGTCAGAGTGAAAGAGGACTTCTCAACTCCTTACGTGGAAATAGTAATATCTACGACCAAAAGAGTCAGGAGCATGTCCAAGTGACTGAAGTCAAGGGTCCTACTTCAATTGATGTCTGCAATATCAACCTTTCAATTTCTGTTCCTTTCAGCAAATGGATGGGACCAGCTATCAAAATGTCTCTCCCAAGTTATAGGGTGCGAGCAGTAAAGCCAGCAGCAGTCTCGGTCAAACTTCCCACATCTATCGACAGAGCACAAGATCGAGACCACCATGCTGGGGAAGATGCAGAACATGAACAAAGCCTCTGTACATCTGTTCTATTGTCAAAGCCCATACTAGCTTTAGAGTTTAGTTGCATGGAAATGCAAGTCCAAGCTCCCGCTGTTGTTTCTCAATATTTTAAACACTCTCTCAGAACACCATGA

Protein sequence

MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLANYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRIEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMGPAIKMSLPSYRVRAVKPAAVSVKLPTSIDRAQDRDHHAGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP

Homology

[Close]

BLAST of HG10002141 vs. NCBI nr
Match: XP_038898326.1 (protein NEOXANTHIN-DEFICIENT 1 [Benincasa hispida])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 242/291 (83.16%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           ME GEKNCSSGYGKPPW F GRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN
Sbjct: 1   METGEKNCSSGYGKPPWTFTGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG+FDELVVISGIVWNRPTSCAWAAKVLVNS +ACDHGRKEVGLPSQ ARFTKRI
Sbjct: 61  YDDSPAGSFDELVVISGIVWNRPTSCAWAAKVLVNSDEACDHGRKEVGLPSQAARFTKRI 120

Query: 121 EAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMG 180
           EAVP RQSERGLLNSLR NSN ++QK+QEH+QVTE+KGPTSIDVCNINLSISVPF+KWMG
Sbjct: 121 EAVPKRQSERGLLNSLRENSNFHNQKNQEHIQVTEMKGPTSIDVCNINLSISVPFTKWMG 180

Query: 181 PAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH---- 240
           P IKMSLPSY                   RVRAVKPA VSV+LP S DRAQD DHH    
Sbjct: 181 PVIKMSLPSYSGHSEYTPELLKYSCQIRCRVRAVKPAVVSVELPASTDRAQDADHHSHNT 240

Query: 241 -AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
            AGEDAEHEQSLCTSVLLSKPILALEFSCMEM+VQAP VVSQYFKHSLRTP
Sbjct: 241 RAGEDAEHEQSLCTSVLLSKPILALEFSCMEMEVQAPTVVSQYFKHSLRTP 291

[Close]

BLAST of HG10002141 vs. NCBI nr
Match: XP_008454132.1 (PREDICTED: protein NEOXANTHIN-DEFICIENT 1 [Cucumis melo] >TYK29638.1 protein NEOXANTHIN-DEFICIENT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 463.8 bits (1192), Expect = 1.0e-126
Identity = 237/292 (81.16%), Postives = 252/292 (86.30%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWKFRGRALYQLHLVKAGTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSV+ACDHGRKEVGLPS VARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVEACDHGRKEVGLPSHVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP RQSERGLL+ LR NSN ++QK+QEHVQVTEVKGPTSIDVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKRQSERGLLSFLRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH--- 240
           GPAIKMSLPSY                   RVRAVKPA VSV+LP +++RA+D DHH   
Sbjct: 181 GPAIKMSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELP-ALNRAEDGDHHSHI 240

Query: 241 --AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
             +GED EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYF HSLRTP
Sbjct: 241 TRSGEDGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of HG10002141 vs. NCBI nr
Match: KAA0044509.1 (protein NEOXANTHIN-DEFICIENT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 461.5 bits (1186), Expect = 5.1e-126
Identity = 236/292 (80.82%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWKFRGRALYQLHLVKAGTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSV+ACDHGRKEVGLPS VARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVEACDHGRKEVGLPSHVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP RQSERGLL+  R NSN ++QK+QEHVQVTEVKGPTSIDVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKRQSERGLLSFSRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH--- 240
           GPAIKMSLPSY                   RVRAVKPA VSV+LP +++RA+D DHH   
Sbjct: 181 GPAIKMSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELP-ALNRAEDGDHHSHI 240

Query: 241 --AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
             +GED EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYF HSLRTP
Sbjct: 241 TRSGEDGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of HG10002141 vs. NCBI nr
Match: XP_004152157.1 (protein NEOXANTHIN-DEFICIENT 1 isoform X2 [Cucumis sativus] >KAE8649081.1 hypothetical protein Csa_015269 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 3.6e-124
Identity = 231/292 (79.11%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW+FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWMFRGRALYQLHLVKATTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNS +ACDHGRKEVGLPSQVARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSAEACDHGRKEVGLPSQVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP  QSE+GLL+ LRGNSN ++QK+QEHVQV EVKGPTS+DVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKHQSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHA-- 240
           GPAIKMSLPSY                   RVRAVKPA VS+    +++RA+D DHH+  
Sbjct: 181 GPAIKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSI---PALNRAEDGDHHSHI 240

Query: 241 ---GEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
              GE  EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYFKHSLRTP
Sbjct: 241 TRTGEYGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 289

[Close]

BLAST of HG10002141 vs. NCBI nr
Match: XP_022145818.1 (protein NEOXANTHIN-DEFICIENT 1 [Momordica charantia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.3e-116
Identity = 219/290 (75.52%), Postives = 235/290 (81.03%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           MEVGE+NCS GYG+PPW FRGRALYQLHLVK K ARACIPKELRLVEAFGYTLGGFFLA+
Sbjct: 56  MEVGERNCSPGYGRPPWTFRGRALYQLHLVKGKIARACIPKELRLVEAFGYTLGGFFLAS 115

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAGTFDELVVI+GIVWNRPTSCAWAAKVLVNSV ACDHGRKE+GLPSQVARFTKRI
Sbjct: 116 YDDSPAGTFDELVVIAGIVWNRPTSCAWAAKVLVNSVQACDHGRKEIGLPSQVARFTKRI 175

Query: 121 EAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMG 180
           EAVP  +SE GLLNSL G  N+Y+QK+QEHVQVTEVKGPTS  +CNINLS SVP +KWMG
Sbjct: 176 EAVPKHRSESGLLNSLGGKINVYNQKNQEHVQVTEVKGPTSTSICNINLSTSVPLNKWMG 235

Query: 181 PAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDH----H 240
           PAIKMSLPSY                   RVRAVKP  VSV+ P     AQ+  H     
Sbjct: 236 PAIKMSLPSYSGHTEYTPELFKYSCQIRCRVRAVKPMKVSVEFP-----AQNEHHSCTRR 295

Query: 241 AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
            GE AE EQSL TSVLLSKPILALEFSCMEM+V+AP VVSQYF HSLRTP
Sbjct: 296 GGEGAEEEQSLSTSVLLSKPILALEFSCMEMKVEAPTVVSQYFNHSLRTP 340

[Close]

BLAST of HG10002141 vs. ExPASy Swiss-Prot
Match: Q8GWB2 (Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=NDX1 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.0e-80
Identity = 155/278 (55.76%), Postives = 195/278 (70.14%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+K I
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNI 120

Query: 121 EAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL-SISVPFSK 180
            AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + S       
Sbjct: 121 TAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGN 180

Query: 181 WMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHA 240
           WMGPAIKM+LPS+                   RVR V+PA VS  L    ++  +++H +
Sbjct: 181 WMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTS 240

Query: 241 GEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVV 257
            E  E+E+ L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 241 QESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]

BLAST of HG10002141 vs. ExPASy Swiss-Prot
Match: K4DEY3 (Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum OX=4081 GN=NXD1 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-70
Identity = 149/291 (51.20%), Postives = 192/291 (65.98%), Query Frame = 0


Query: 1   MEVGEKNCSS-GYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           MEV + NC+S GYGKPPWIF+G ALYQLHLVKA+ ARA IPKE +LVEAFGYTLGGFFLA
Sbjct: 1   MEVKDTNCTSLGYGKPPWIFKGSALYQLHLVKAENARAFIPKECKLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           +Y+DSPAG FDELVVI+G+VWN PTSCAWAA+VLV S +AC HGRK VGLPSQVARF+K+
Sbjct: 61  SYDDSPAGIFDELVVIAGLVWNPPTSCAWAARVLVGSDEACLHGRKVVGLPSQVARFSKK 120

Query: 121 IEAVPMRQSERG----LLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISV-- 180
           I A+P +   +         LR +SN    K+   V+VTE+K  T++ +CNIN++ +   
Sbjct: 121 ITALPQKPESKSSSFLRRIGLRTSSN---YKNHMDVEVTEIKKQTAMSICNINVNATASQ 180

Query: 181 -PFSKWMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQD 240
                WMGP IKMSLP++                   RVRAV+PA VS    +  D+   
Sbjct: 181 QDSKGWMGPLIKMSLPNFSGRTKYNSDLLKYSCQIECRVRAVQPAKVSGPSESDADKENS 240

Query: 241 RDHHAGE-------DAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVS 258
            +  +             +++   SV+LSKPILALEF+ ++M+V+AP  V+
Sbjct: 241 SEDQSSNVESVSRVPRGTKRNFSISVMLSKPILALEFNHLKMRVEAPTTVT 288

[Close]

BLAST of HG10002141 vs. ExPASy Swiss-Prot
Match: Q0IWM5 (Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NDX1 PE=3 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-65
Identity = 144/286 (50.35%), Postives = 181/286 (63.29%), Query Frame = 0


Query: 5   EKNCSSGYGK-PPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLANYED 64
           E   ++GYG+ PPW+FRGRALYQLHLVKA TARA +P+ELRLVEAFGYTLGG FLA Y+D
Sbjct: 9   EAAAAAGYGRGPPWVFRGRALYQLHLVKAATARAFVPRELRLVEAFGYTLGGMFLARYDD 68

Query: 65  SPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRIEAV 124
           SPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPS VA F+ + EA 
Sbjct: 69  SPAGKFDELVVIAGIVWNPPTSCAWAARVLVNSAEACRHGRKEVGLPSHVATFS-QTEAD 128

Query: 125 PMRQ----SERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFS-KW 184
            +R          L+ L   S + +Q +   ++++E KG  +  +CNI++ ++     KW
Sbjct: 129 ALRNKPLVKSNSFLSLLGMRSTVSNQGNDREIEISETKGSCTRHLCNISVPLTGSHKHKW 188

Query: 185 MGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQD-RDHHA 244
           MGPAI+MSLPS+                   RVR V+PA +     T      D +    
Sbjct: 189 MGPAIRMSLPSFSGQIEDHPDLLKYSCQVECRVRPVRPAKIWRPRITEPQECPDGKISSK 248

Query: 245 GEDAEHE---QSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFK 262
           G +   E   Q     VLLSKPILALEF+ +EM V AP +V  + K
Sbjct: 249 GSEVLAEPDAQKHTVMVLLSKPILALEFNSLEMHVDAPKIVIPHSK 293

[Close]

BLAST of HG10002141 vs. ExPASy TrEMBL
Match: A0A5D3E1J6 (Protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002500 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.0e-127
Identity = 237/292 (81.16%), Postives = 252/292 (86.30%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWKFRGRALYQLHLVKAGTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSV+ACDHGRKEVGLPS VARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVEACDHGRKEVGLPSHVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP RQSERGLL+ LR NSN ++QK+QEHVQVTEVKGPTSIDVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKRQSERGLLSFLRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH--- 240
           GPAIKMSLPSY                   RVRAVKPA VSV+LP +++RA+D DHH   
Sbjct: 181 GPAIKMSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELP-ALNRAEDGDHHSHI 240

Query: 241 --AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
             +GED EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYF HSLRTP
Sbjct: 241 TRSGEDGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of HG10002141 vs. ExPASy TrEMBL
Match: A0A1S3BZ40 (protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo OX=3656 GN=LOC103494625 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.0e-127
Identity = 237/292 (81.16%), Postives = 252/292 (86.30%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWKFRGRALYQLHLVKAGTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSV+ACDHGRKEVGLPS VARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVEACDHGRKEVGLPSHVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP RQSERGLL+ LR NSN ++QK+QEHVQVTEVKGPTSIDVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKRQSERGLLSFLRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH--- 240
           GPAIKMSLPSY                   RVRAVKPA VSV+LP +++RA+D DHH   
Sbjct: 181 GPAIKMSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELP-ALNRAEDGDHHSHI 240

Query: 241 --AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
             +GED EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYF HSLRTP
Sbjct: 241 TRSGEDGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of HG10002141 vs. ExPASy TrEMBL
Match: A0A5A7TTG0 (Protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002490 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.5e-126
Identity = 236/292 (80.82%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MEVGEKNC-SSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLA 60
           ME+G++ C SSGYGKPPW FRGRALYQLHLVKA TARACIPKELRLVEAFGYTLGGFFLA
Sbjct: 1   MEIGDQKCSSSGYGKPPWKFRGRALYQLHLVKAGTARACIPKELRLVEAFGYTLGGFFLA 60

Query: 61  NYEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKR 120
           NY+DSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSV+ACDHGRKEVGLPS VARFTKR
Sbjct: 61  NYDDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVEACDHGRKEVGLPSHVARFTKR 120

Query: 121 IEAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWM 180
           IEAVP RQSERGLL+  R NSN ++QK+QEHVQVTEVKGPTSIDVCNINLS SVPFSKWM
Sbjct: 121 IEAVPKRQSERGLLSFSRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWM 180

Query: 181 GPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHH--- 240
           GPAIKMSLPSY                   RVRAVKPA VSV+LP +++RA+D DHH   
Sbjct: 181 GPAIKMSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELP-ALNRAEDGDHHSHI 240

Query: 241 --AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
             +GED EHEQSLCTSVLLSKPILALEFSCMEMQVQAP VVSQYF HSLRTP
Sbjct: 241 TRSGEDGEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of HG10002141 vs. ExPASy TrEMBL
Match: A0A6J1CWZ7 (protein NEOXANTHIN-DEFICIENT 1 OS=Momordica charantia OX=3673 GN=LOC111015179 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.1e-117
Identity = 219/290 (75.52%), Postives = 235/290 (81.03%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           MEVGE+NCS GYG+PPW FRGRALYQLHLVK K ARACIPKELRLVEAFGYTLGGFFLA+
Sbjct: 56  MEVGERNCSPGYGRPPWTFRGRALYQLHLVKGKIARACIPKELRLVEAFGYTLGGFFLAS 115

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAGTFDELVVI+GIVWNRPTSCAWAAKVLVNSV ACDHGRKE+GLPSQVARFTKRI
Sbjct: 116 YDDSPAGTFDELVVIAGIVWNRPTSCAWAAKVLVNSVQACDHGRKEIGLPSQVARFTKRI 175

Query: 121 EAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMG 180
           EAVP  +SE GLLNSL G  N+Y+QK+QEHVQVTEVKGPTS  +CNINLS SVP +KWMG
Sbjct: 176 EAVPKHRSESGLLNSLGGKINVYNQKNQEHVQVTEVKGPTSTSICNINLSTSVPLNKWMG 235

Query: 181 PAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDH----H 240
           PAIKMSLPSY                   RVRAVKP  VSV+ P     AQ+  H     
Sbjct: 236 PAIKMSLPSYSGHTEYTPELFKYSCQIRCRVRAVKPMKVSVEFP-----AQNEHHSCTRR 295

Query: 241 AGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
            GE AE EQSL TSVLLSKPILALEFSCMEM+V+AP VVSQYF HSLRTP
Sbjct: 296 GGEGAEEEQSLSTSVLLSKPILALEFSCMEMKVEAPTVVSQYFNHSLRTP 340

[Close]

BLAST of HG10002141 vs. ExPASy TrEMBL
Match: A0A6J1IS89 (protein NEOXANTHIN-DEFICIENT 1 OS=Cucurbita maxima OX=3661 GN=LOC111480077 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.8e-116
Identity = 220/286 (76.92%), Postives = 237/286 (82.87%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           ME GEK  S+GYG+PPW FRGRALYQLHLVKAKTAR CIPKELRLVE FGYTLGGFFLAN
Sbjct: 1   MENGEKKRSTGYGRPPWTFRGRALYQLHLVKAKTARKCIPKELRLVEVFGYTLGGFFLAN 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG+FDELVVI+GIVWNRPTSCAWAAKVLVNS +ACDHGRKEVGLPSQVARFTKRI
Sbjct: 61  YDDSPAGSFDELVVIAGIVWNRPTSCAWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRI 120

Query: 121 EAVPMRQSERGLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINLSISVPFSKWMG 180
           EAVP  +SERGLLNS RG+S+  +QK+QEHVQVTEVK PTSIDVCNINLSISVP SKWMG
Sbjct: 121 EAVPKHRSERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISVPLSKWMG 180

Query: 181 PAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHAGED 240
           PAI+MSLPSY                   RVRAVKPAAV      +I+RA + + H    
Sbjct: 181 PAIRMSLPSYSGHTENTPELLKYSCQIQCRVRAVKPAAV------TIERAGEDEQH---- 240

Query: 241 AEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVVSQYFKHSLRTP 268
            EHEQSL T+VLLSKPILALEFSCMEMQVQAP VVSQYFKHSLRTP
Sbjct: 241 -EHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 275

[Close]

BLAST of HG10002141 vs. TAIR 10
Match: AT1G28100.1 (unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-81
Identity = 155/278 (55.76%), Postives = 195/278 (70.14%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+K I
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNI 120

Query: 121 EAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL-SISVPFSK 180
            AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + S       
Sbjct: 121 TAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGN 180

Query: 181 WMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHA 240
           WMGPAIKM+LPS+                   RVR V+PA VS  L    ++  +++H +
Sbjct: 181 WMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTS 240

Query: 241 GEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVV 257
            E  E+E+ L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 241 QESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]

BLAST of HG10002141 vs. TAIR 10
Match: AT1G28100.3 (unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-81
Identity = 155/278 (55.76%), Postives = 195/278 (70.14%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+K I
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNI 120

Query: 121 EAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL-SISVPFSK 180
            AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + S       
Sbjct: 121 TAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGN 180

Query: 181 WMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHA 240
           WMGPAIKM+LPS+                   RVR V+PA VS  L    ++  +++H +
Sbjct: 181 WMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTS 240

Query: 241 GEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVV 257
            E  E+E+ L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 241 QESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]

BLAST of HG10002141 vs. TAIR 10
Match: AT1G28100.2 (unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-81
Identity = 155/278 (55.76%), Postives = 195/278 (70.14%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+K I
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNI 120

Query: 121 EAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL-SISVPFSK 180
            AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + S       
Sbjct: 121 TAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGN 180

Query: 181 WMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDRAQDRDHHA 240
           WMGPAIKM+LPS+                   RVR V+PA VS  L    ++  +++H +
Sbjct: 181 WMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTS 240

Query: 241 GEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVV 257
            E  E+E+ L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 241 QESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]

BLAST of HG10002141 vs. TAIR 10
Match: AT1G28100.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 293.1 bits (749), Expect = 2.2e-79
Identity = 155/286 (54.20%), Postives = 195/286 (68.18%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFT--- 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+   
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKVS 120

Query: 121 -----KRIEAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL- 180
                K I AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + 
Sbjct: 121 DTLFLKNITAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIR 180

Query: 181 SISVPFSKWMGPAIKMSLPSY-------------------RVRAVKPAAVSVKLPTSIDR 240
           S       WMGPAIKM+LPS+                   RVR V+PA VS  L    ++
Sbjct: 181 SDETKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEK 240

Query: 241 AQDRDHHAGEDAEHEQSLCTSVLLSKPILALEFSCMEMQVQAPAVV 257
             +++H + E  E+E+ L  +V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 241 FTEQNHTSQESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 286

[Close]

BLAST of HG10002141 vs. TAIR 10
Match: AT1G28100.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-67
Identity = 125/193 (64.77%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 1   MEVGEKNCSSGYGKPPWIFRGRALYQLHLVKAKTARACIPKELRLVEAFGYTLGGFFLAN 60
           M+V EK  SSGY KPPWIF+G ALYQ+HLVKA TARA IPKE RLVEAFGYTLGGFFLA+
Sbjct: 1   MDVEEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLAS 60

Query: 61  YEDSPAGTFDELVVISGIVWNRPTSCAWAAKVLVNSVDACDHGRKEVGLPSQVARFTKRI 120
           Y+DSPAG FDELVVI+GIVWN PTSCAWAA+VLVNS +AC HGRKEVGLPSQVARF+K I
Sbjct: 61  YDDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNI 120

Query: 121 EAVPMRQSER--GLLNSLRGNSNIYDQKSQEHVQVTEVKGPTSIDVCNINL-SISVPFSK 180
            AVP ++ +R  G L++    + +   ++   V+V+EV    S D+CNI + S       
Sbjct: 121 TAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGN 180

Query: 181 WMGPAIKMSLPSY 191
           WMGPAIKM+LPS+
Sbjct: 181 WMGPAIKMALPSF 193

The following BLAST results are available for this feature:

BLAST of HG10002141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898326.1	2.1e-132	83.16	protein NEOXANTHIN-DEFICIENT 1 [Benincasa hispida]	[more]
XP_008454132.1	1.0e-126	81.16	PREDICTED: protein NEOXANTHIN-DEFICIENT 1 [Cucumis melo] >TYK29638.1 protein NEO...	[more]
KAA0044509.1	5.1e-126	80.82	protein NEOXANTHIN-DEFICIENT 1 [Cucumis melo var. makuwa]	[more]
XP_004152157.1	3.6e-124	79.11	protein NEOXANTHIN-DEFICIENT 1 isoform X2 [Cucumis sativus] >KAE8649081.1 hypoth...	[more]
XP_022145818.1	1.3e-116	75.52	protein NEOXANTHIN-DEFICIENT 1 [Momordica charantia]	[more]

BLAST of HG10002141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWB2	2.0e-80	55.76	Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=NDX1 PE=2 SV=1	[more]
K4DEY3	1.4e-70	51.20	Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum OX=4081 GN=NXD1 PE=4 SV=1	[more]
Q0IWM5	1.4e-65	50.35	Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NDX1 ...	[more]

BLAST of HG10002141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1J6	5.0e-127	81.16	Protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BZ40	5.0e-127	81.16	protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo OX=3656 GN=LOC103494625 PE=4 SV=1	[more]
A0A5A7TTG0	2.5e-126	80.82	Protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1CWZ7	6.1e-117	75.52	protein NEOXANTHIN-DEFICIENT 1 OS=Momordica charantia OX=3673 GN=LOC111015179 PE...	[more]
A0A6J1IS89	8.8e-116	76.92	protein NEOXANTHIN-DEFICIENT 1 OS=Cucurbita maxima OX=3661 GN=LOC111480077 PE=4 ...	[more]

BLAST of HG10002141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28100.1	1.4e-81	55.76	unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bac...	[more]
AT1G28100.3	1.4e-81	55.76	unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bac...	[more]
AT1G28100.2	1.4e-81	55.76	unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bac...	[more]
AT1G28100.4	2.2e-79	54.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28100.5	1.5e-67	64.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023375	Acetoacetate decarboxylase domain superfamily	GENE3D	2.40.400.10		coord: 1..172 e-value: 3.1E-9 score: 38.9
IPR023375	Acetoacetate decarboxylase domain superfamily	SUPERFAMILY	160104	Acetoacetate decarboxylase-like	coord: 9..119
IPR039343	Protein NEOXANTHIN-DEFICIENT 1-like	PANTHER	PTHR35467	FAMILY NOT NAMED	coord: 1..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002141.1	HG10002141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane