HG10002103 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002103
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Eukaryotic translation initiation factor 2A
Location	Chr11: 3390324 .. 3391892 (-)
RNA-Seq Expression	HG10002103
Synteny	HG10002103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCAAGAGCAACGGTGTTTGACAAGAAGTGCAAGCCTCTTCTTGAGCTTGGAGAAGGTCCCTACAATACTGTACGATGGAACCCAAAGGGGAAATGTATCCTATTTTGAATGTTCTATGCTTCATTTCTGGGATATCTACCTATGCTTTCTCCATTTTGTTTTAGCTTTTGCCCGTCTCTTGTTTTTCTTCTCTTCTTTTCTCTTCTCTTCTTTCAAGGGAGGAACTACTATGGTTTCATTAATGTTATTTTGTGACCTTAATTCTCTGGCCTGCAGTTCTATGTTTGGCAGGCTTTGGTAATCTGCCTGGTGACATGGTATGTCATCTCAATGCTTTGCATTCGCTGTTTCATATATTTATTATGTGTCGCGTTCTCTGTGTTGCATAAAAAATGAACAAAAGCTTCTTGTTGTTTATGGCATGCTTCTCTTCAGATGCTAATTTGATAAATTTCAAATCCTTTCCAAATTCGTTAAACATTGTACACTTGTAAAATCAATGGTCCAGCCCCTATTATATTAATTATCAATAGTCTAGTTTTGCGCTCATATTATATTATTATGCTCTTGCCTTTTTTTGTCCTCCCATGATTGAAGGAAATGATATTTCATATTTTATTTTCATGATTACAATTTCTTCTGCTTGCAATCATCTTAACAGGCATTTTGGGACTACAAGGAGAAAAAACAGCTTGGAACAACAAAAGCTGAATGCTCCGTTACCAGCGAATGGTCCCCAGATGGACGCTATTTCATGACTGCTACAACGGCTCCAAGACTTCAAGTCGACAACGGGTACACAAATTTTATACATTGTTGTGCAGATATGCACAAAGATTGTTAGTGCTTATAACCTAAATAATGTAAAAAGAGACTCGAAAACTAATGGTGCTTTAAGGGTAGCAACTTGTGTTACCATTGAAGAGTATATATCATTTTGTGGTTTTATTTTTAAGTATGGTTCATTTTTGCTGACACATTCAAATTTCAACCCGTTGAATATTCTTGGTGTCTCAATCTGCACACGGGAGATTGTGGTCAGCTATAAATAAGTTGATATCATTGTTTTCCTTATATAGGATAAAAATTTTCCATCACAATGGAACTTTGTACTTCAAGAAAATGTTTGACAAGTTGTTCCAGGTAAGAGCTGTTCACCTTTCATTTTTAAAGATGTTTAACATGACTACTCGCTCTTTTCCTCATGCAAACGCTTTGTGCAGGCCGATTGGAAGCCAGAGTCGCTAGATAAATTTGGTGAAATTGATCTACTAGTCAAGTCAGTAGAATCACTTAATGTTGATCAAAAGAAAACACAAGGTTCCATCTTGAAACTATTATCTTATGTCTACCTGCTTACGTATTTATCCAGTTTAATTGAGCAGTTAGATTTTTCTAAATCTAGGGCAAGCTTCAAAAGTCTCACAGACATCGCAGAAAGCTGCTCCCTCCAACCCTCCTGTTCAGAAGCCTGCTGCTTATAGGCCACCACATGCGAAAAATGCTGCTGCTATTCAGGCAGAGGTATTGATTTTTGAGTTCTCTCCCCTTTCATCCAAGTGA

mRNA sequence

ATGCCTGCAAGAGCAACGGTGTTTGACAAGAAGTGCAAGCCTCTTCTTGAGCTTGGAGAAGTTCTATGTTTGGCAGGCTTTGGTAATCTGCCTGGTGACATGGCATTTTGGGACTACAAGGAGAAAAAACAGCTTGGAACAACAAAAGCTGAATGCTCCGTTACCAGCGAATGGTCCCCAGATGGACGCTATTTCATGACTGCTACAACGGCTCCAAGACTTCAAGTCGACAACGGGATAAAAATTTTCCATCACAATGGAACTTTGTACTTCAAGAAAATGTTTGACAAGTTGTTCCAGGCCGATTGGAAGCCAGAGTCGCTAGATAAATTTGGTGAAATTGATCTACTAGTCAAGTCAGTAGAATCACTTAATGTTGATCAAAAGAAAACACAAGGGCAAGCTTCAAAAGTCTCACAGACATCGCAGAAAGCTGCTCCCTCCAACCCTCCTGTTCAGAAGCCTGCTGCTTATAGGCCACCACATGCGAAAAATGCTGCTGCTATTCAGGCAGAGGTATTGATTTTTGAGTTCTCTCCCCTTTCATCCAAGTGA

Coding sequence (CDS)

ATGCCTGCAAGAGCAACGGTGTTTGACAAGAAGTGCAAGCCTCTTCTTGAGCTTGGAGAAGTTCTATGTTTGGCAGGCTTTGGTAATCTGCCTGGTGACATGGCATTTTGGGACTACAAGGAGAAAAAACAGCTTGGAACAACAAAAGCTGAATGCTCCGTTACCAGCGAATGGTCCCCAGATGGACGCTATTTCATGACTGCTACAACGGCTCCAAGACTTCAAGTCGACAACGGGATAAAAATTTTCCATCACAATGGAACTTTGTACTTCAAGAAAATGTTTGACAAGTTGTTCCAGGCCGATTGGAAGCCAGAGTCGCTAGATAAATTTGGTGAAATTGATCTACTAGTCAAGTCAGTAGAATCACTTAATGTTGATCAAAAGAAAACACAAGGGCAAGCTTCAAAAGTCTCACAGACATCGCAGAAAGCTGCTCCCTCCAACCCTCCTGTTCAGAAGCCTGCTGCTTATAGGCCACCACATGCGAAAAATGCTGCTGCTATTCAGGCAGAGGTATTGATTTTTGAGTTCTCTCCCCTTTCATCCAAGTGA

Protein sequence

MPARATVFDKKCKPLLELGEVLCLAGFGNLPGDMAFWDYKEKKQLGTTKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPESLDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAAAIQAEVLIFEFSPLSSK

Homology

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BLAST of HG10002103 vs. NCBI nr
Match: XP_038877052.1 (eukaryotic translation initiation factor 2A [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.5e-87
Identity = 165/187 (88.24%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLGT
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGT 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFH+NGTLY+KKMFDKLFQADWKPE 
Sbjct: 356 TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHYNGTLYYKKMFDKLFQADWKPEL 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLN+DQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 PDKFGEIDLLVKSVESLNIDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

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BLAST of HG10002103 vs. NCBI nr
Match: XP_008454042.1 (PREDICTED: eukaryotic translation initiation factor 2A [Cucumis melo] >KAA0044550.1 eukaryotic translation initiation factor 2A [Cucumis melo var. makuwa] >TYK17031.1 eukaryotic translation initiation factor 2A [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TK+ECSVTSEWSPDG+YFMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 356 TKSECSVTSEWSPDGQYFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. NCBI nr
Match: XP_011653038.1 (eukaryotic translation initiation factor 2A [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 4.6e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDG++FMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 356 TKAECSVTSEWSPDGQFFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. NCBI nr
Match: KAE8649094.1 (hypothetical protein Csa_015000 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 4.6e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 347 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 406

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDG++FMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 407 TKAECSVTSEWSPDGQFFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 466

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 467 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 526

[Close]

BLAST of HG10002103 vs. NCBI nr
Match: XP_022955944.1 (eukaryotic translation initiation factor 2A [Cucurbita moschata] >KAG6582015.1 Eukaryotic translation initiation factor 2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 8.7e-85
Identity = 162/187 (86.63%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE             +LC+AGFGNLPGDMAFWD KEKKQLGT
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGRLLCIAGFGNLPGDMAFWDVKEKKQLGT 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFH NGTLYFKKMFDKLFQADWKPES
Sbjct: 356 TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHCNGTLYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEID LVKSVESLN+DQKKTQGQ SK+SQ SQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 PDKFGEIDELVKSVESLNIDQKKTQGQGSKLSQASQKTAPSNPPVQKPAAYRPPHAKNAA 475

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BLAST of HG10002103 vs. ExPASy Swiss-Prot
Match: Q54PV7 (Eukaryotic translation initiation factor 2A OS=Dictyostelium discoideum OX=44689 GN=eif2a PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24
Identity = 57/165 (34.55%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLEL-------------GEVLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MP++ T+F+ K +PL++              G++LCL GFGNL GDM FWD    K++  
Sbjct: 334 MPSQTTLFNLKGEPLVDFGLNPRNTIRFSPNGQLLCLGGFGNLQGDMDFWDLTRYKRICG 393

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           T++ C++ +EWS D  +FMTA  +PR++VDNG+KI  ++ T+ +++   +L+QA W+P +
Sbjct: 394 TQSHCAIYTEWSADSVHFMTAVLSPRIRVDNGVKIIKYDNTIVYQENIPELYQASWRPLN 453

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPV 153
              F    ++  S++     QK++  Q  K +  S +   + PPV
Sbjct: 454 PLVFPNERIVYPSIQ----QQKESSPQPQKYTPPSLRNMQAAPPV 494

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BLAST of HG10002103 vs. ExPASy Swiss-Prot
Match: Q4QRJ7 (Eukaryotic translation initiation factor 2A OS=Danio rerio OX=7955 GN=eif2a PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-20
Identity = 67/200 (33.50%), Postives = 96/200 (48.00%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLEL-------------GEVLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPA+ATVF+ KC+ + +              G +L LAGFGNL G M  WD K+ KQ+  
Sbjct: 294 MPAKATVFNNKCESVFDFGTGPRNAAFYSPQGHILVLAGFGNLRGQMEVWDVKKYKQVSK 353

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFK---KMFDKLFQADWK 120
            +AE +    W PDG + +TAT +PRL+  NG KI+H+ GT+ +K       +L++  W+
Sbjct: 354 PQAEDTTHFSWCPDGEHIVTATCSPRLRASNGYKIWHYTGTVLYKHETPSGKELWEVLWQ 413

Query: 121 PESLDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAK 180
           P     F E     ++V        K Q   S++  T  K A          AYRPP  +
Sbjct: 414 PFPAGVFPE-----RAV--------KYQALPSELGSTEAKPA---------QAYRPPALR 471

Query: 181 NAAAIQAEVLIFEFSPLSSK 185
           N     +  L  E  P + K
Sbjct: 474 NKPQTASSKLHEEEPPQNMK 471

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BLAST of HG10002103 vs. ExPASy Swiss-Prot
Match: Q8BJW6 (Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-19
Identity = 66/184 (35.87%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLEL-------------GEVLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPA+ATVF+ KC P+ +              G +L LAGFGNL G M  WD K  K +  
Sbjct: 295 MPAKATVFNLKCDPVFDFGTGPRNAAFYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISK 354

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFK---KMFDKLFQADWK 120
             A  S    W PDG + +TAT APRL+V+NG KI+H+ G+L  K       +L+Q  W+
Sbjct: 355 PVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSLLHKYDVPSNGELWQVSWQ 414

Query: 121 PESLDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKP---AAYRPP 166
           P  LD                +   KT            +A PS  P ++P    AYRPP
Sbjct: 415 P-FLD---------------GIFPAKT---------IKYQAVPSEVPSEEPKVATAYRPP 453

[Close]

BLAST of HG10002103 vs. ExPASy Swiss-Prot
Match: Q9VNX8 (Eukaryotic translation initiation factor 2A OS=Drosophila melanogaster OX=7227 GN=CG7414 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 52/180 (28.89%), Postives = 88/180 (48.89%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MP++A +++ KC  + + GE             ++ LAGFGNLPG +  WD  ++++L  
Sbjct: 311 MPSKAALYNLKCDVVFDFGEGPRNCAYFNPFGNLIALAGFGNLPGAVEVWDVSKREKLAN 370

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMF---DKLFQADWK 120
            K   +   EW P+G +F+TATTAPRL++ NG K++H++G L  + M+    +L   +W+
Sbjct: 371 LKCADTTVFEWHPNGEWFVTATTAPRLRISNGFKVYHYSGALLHETMWPQGQELLGIEWQ 430

Query: 121 PESLDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAK 165
             +   F E                       K+++   +   S+ P     AY PPH +
Sbjct: 431 QFADKTFSE----------------------PKITKAKHEGIKSSQPEASKKAYTPPHLR 468

[Close]

BLAST of HG10002103 vs. ExPASy Swiss-Prot
Match: Q5ZKC1 (Eukaryotic translation initiation factor 2A OS=Gallus gallus OX=9031 GN=EIF2A PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-19
Identity = 64/184 (34.78%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLEL-------------GEVLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPA+ATVF+ KC P+ +              G +L LAGFGNL G M  WD K  K +  
Sbjct: 295 MPAKATVFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISK 354

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTL---YFKKMFDKLFQADWK 120
             A  S    W PDG + +TAT APRL+V NG KI+H+ G++   Y     ++++Q  W+
Sbjct: 355 PVASDSTYFAWCPDGEHIVTATCAPRLRVSNGYKIWHYTGSVLHNYEVPSNEEMWQVSWQ 414

Query: 121 PESLDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKP---AAYRPP 166
           P     F +    VK+V+                     +A PS  P  +P    AYRPP
Sbjct: 415 P-----FLDGVFPVKAVK--------------------YQAVPSELPSAEPKPAQAYRPP 453

[Close]

BLAST of HG10002103 vs. ExPASy TrEMBL
Match: A0A5A7TMY6 (Eukaryotic translation initiation factor 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001770 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TK+ECSVTSEWSPDG+YFMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 356 TKSECSVTSEWSPDGQYFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. ExPASy TrEMBL
Match: A0A1S3BXP8 (Eukaryotic translation initiation factor 2A OS=Cucumis melo OX=3656 GN=LOC103494586 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TK+ECSVTSEWSPDG+YFMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 356 TKSECSVTSEWSPDGQYFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. ExPASy TrEMBL
Match: A0A0A0KXB3 (Eukaryotic translation initiation factor 2A OS=Cucumis sativus OX=3659 GN=Csa_4G011690 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 164/187 (87.70%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE              LCLAGFGNLPGDMAFWDYKEKKQLG 
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGR 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDG++FMTATTAPRLQVDNGIKIFH+NG LYFKKMFDKLFQADWKPES
Sbjct: 356 TKAECSVTSEWSPDGQFFMTATTAPRLQVDNGIKIFHYNGALYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEIDLLVKSVESLNVDQKKTQGQ SKVSQTSQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 SDKFGEIDLLVKSVESLNVDQKKTQGQGSKVSQTSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. ExPASy TrEMBL
Match: A0A6J1GXP1 (Eukaryotic translation initiation factor 2A OS=Cucurbita moschata OX=3662 GN=LOC111457778 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.2e-85
Identity = 162/187 (86.63%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE             +LC+AGFGNLPGDMAFWD KEKKQLGT
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTVRWNPKGRLLCIAGFGNLPGDMAFWDVKEKKQLGT 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFH NGTLYFKKMFDKLFQADWKPES
Sbjct: 356 TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHCNGTLYFKKMFDKLFQADWKPES 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEID LVKSVESLN+DQKKTQGQ SK+SQ SQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 PDKFGEIDELVKSVESLNIDQKKTQGQGSKLSQASQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. ExPASy TrEMBL
Match: A0A6J1E0R9 (Eukaryotic translation initiation factor 2A OS=Momordica charantia OX=3673 GN=LOC111024883 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 160/187 (85.56%), Postives = 166/187 (88.77%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPARATVFDKKCKPLLELGE             +LCLAGFGNLPGDMAFWDYKEKKQLGT
Sbjct: 296 MPARATVFDKKCKPLLELGEGPYNTIRWNPKGKLLCLAGFGNLPGDMAFWDYKEKKQLGT 355

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
           TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFH NG+LYFK+MFDKLFQADWKPE 
Sbjct: 356 TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHCNGSLYFKQMFDKLFQADWKPEL 415

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            DKFGEID LVKSVESLNV+ KKTQGQ SK SQ+SQK APSNPPVQKPAAYRPPHAKNAA
Sbjct: 416 PDKFGEIDQLVKSVESLNVEPKKTQGQGSKSSQSSQKTAPSNPPVQKPAAYRPPHAKNAA 475

[Close]

BLAST of HG10002103 vs. TAIR 10
Match: AT1G73180.1 (Eukaryotic translation initiation factor eIF2A family protein )

HSP 1 Score: 238.0 bits (606), Expect = 5.9e-63
Identity = 117/187 (62.57%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPA  T+FDK CKPL+ELGE             VLC+AGFGNLPGDMAFWD   KKQLG+
Sbjct: 294 MPACVTIFDKNCKPLMELGEGPYNTLRWNPKGRVLCVAGFGNLPGDMAFWDVVNKKQLGS 353

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
            KAE SVTSEWSPDGRYF+TA+TAPR Q+DNG+KIF+++G  Y+KKMF++L+QA+WKPES
Sbjct: 354 NKAEWSVTSEWSPDGRYFLTASTAPRRQIDNGMKIFNYDGKRYYKKMFERLYQAEWKPES 413

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 175
            ++FG+I  L+KSVESL + + K+QGQ S      +K    NP  QKPAAYRPPHAK+AA
Sbjct: 414 PERFGDISELIKSVESLKLGEGKSQGQGS----AQKKTIAPNPIAQKPAAYRPPHAKHAA 473

[Close]

BLAST of HG10002103 vs. TAIR 10
Match: AT1G73180.2 (Eukaryotic translation initiation factor eIF2A family protein )

HSP 1 Score: 237.7 bits (605), Expect = 7.7e-63
Identity = 117/186 (62.90%), Postives = 143/186 (76.88%), Query Frame = 0


Query: 1   MPARATVFDKKCKPLLELGE-------------VLCLAGFGNLPGDMAFWDYKEKKQLGT 60
           MPA  T+FDK CKPL+ELGE             VLC+AGFGNLPGDMAFWD   KKQLG+
Sbjct: 294 MPACVTIFDKNCKPLMELGEGPYNTLRWNPKGRVLCVAGFGNLPGDMAFWDVVNKKQLGS 353

Query: 61  TKAECSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHNGTLYFKKMFDKLFQADWKPES 120
            KAE SVTSEWSPDGRYF+TA+TAPR Q+DNG+KIF+++G  Y+KKMF++L+QA+WKPES
Sbjct: 354 NKAEWSVTSEWSPDGRYFLTASTAPRRQIDNGMKIFNYDGKRYYKKMFERLYQAEWKPES 413

Query: 121 LDKFGEIDLLVKSVESLNVDQKKTQGQASKVSQTSQKAAPSNPPVQKPAAYRPPHAKNAA 174
            ++FG+I  L+KSVESL + + K+QGQ S      +K    NP  QKPAAYRPPHAK+AA
Sbjct: 414 PERFGDISELIKSVESLKLGEGKSQGQGS----AQKKTIAPNPIAQKPAAYRPPHAKHAA 473

The following BLAST results are available for this feature:

BLAST of HG10002103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877052.1	5.5e-87	88.24	eukaryotic translation initiation factor 2A [Benincasa hispida]	[more]
XP_008454042.1	3.5e-86	87.70	PREDICTED: eukaryotic translation initiation factor 2A [Cucumis melo] >KAA004455...	[more]
XP_011653038.1	4.6e-86	87.70	eukaryotic translation initiation factor 2A [Cucumis sativus]	[more]
KAE8649094.1	4.6e-86	87.70	hypothetical protein Csa_015000 [Cucumis sativus]	[more]
XP_022955944.1	8.7e-85	86.63	eukaryotic translation initiation factor 2A [Cucurbita moschata] >KAG6582015.1 E...	[more]

BLAST of HG10002103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54PV7	3.1e-24	34.55	Eukaryotic translation initiation factor 2A OS=Dictyostelium discoideum OX=44689...	[more]
Q4QRJ7	3.5e-20	33.50	Eukaryotic translation initiation factor 2A OS=Danio rerio OX=7955 GN=eif2a PE=2...	[more]
Q8BJW6	2.3e-19	35.87	Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE...	[more]
Q9VNX8	3.0e-19	28.89	Eukaryotic translation initiation factor 2A OS=Drosophila melanogaster OX=7227 G...	[more]
Q5ZKC1	3.9e-19	34.78	Eukaryotic translation initiation factor 2A OS=Gallus gallus OX=9031 GN=EIF2A PE...	[more]

BLAST of HG10002103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMY6	1.7e-86	87.70	Eukaryotic translation initiation factor 2A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BXP8	1.7e-86	87.70	Eukaryotic translation initiation factor 2A OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
A0A0A0KXB3	2.2e-86	87.70	Eukaryotic translation initiation factor 2A OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A6J1GXP1	4.2e-85	86.63	Eukaryotic translation initiation factor 2A OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1E0R9	1.8e-83	85.56	Eukaryotic translation initiation factor 2A OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of HG10002103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73180.1	5.9e-63	62.57	Eukaryotic translation initiation factor eIF2A family protein	[more]
AT1G73180.2	7.7e-63	62.90	Eukaryotic translation initiation factor eIF2A family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013979	Translation initiation factor, beta propellor-like domain	PFAM	PF08662	eIF2A	coord: 19..101 e-value: 1.3E-32 score: 113.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..163
IPR011387	Translation initiation factor 2A	PANTHER	PTHR13227	EUKARYOTIC TRANSLATION INITIATION FACTOR 2A	coord: 1..168
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 19..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002103.1	HG10002103.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0000049	tRNA binding