HG10002003 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002003
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	dehydrin DHN1
Location	Chr11: 2532310 .. 2533653 (-)
RNA-Seq Expression	HG10002003
Synteny	HG10002003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCATTACCAATCTGGAACCGATCAGTACGGCAATCCAATTCGCCAAACTGATGAATATGGCAACGTCATCTCCGAGACCGCTCAGTACGGTGACCCCCTTCGCCGGACGGGTGAGTTCCGTGAGACGGACCAGTATGGAAACCCCGTGCGTCGGACTGATGAGTACGGTAATCAATTCGGCACCGGCACTGGCACCGGCGGCACGTATGAGACGGGAGGGTACGGTGGCACCGGTTACGGAGGTGGACACAAGCAGCATAATAAGAGCATGGAGGCATACTTCATCGCTCTGGAAGCTCCAGTTCCAGCTCCGTAAGTTTCGACATAAACTTCTAATCTTTTAGTCGAAAACTAGGCTCCACGTACGAGGTGTTGTGTTCTTAGGTCGCATGATTAAGATTCATGGATAGAAAAAATATTTGAATTATTTATAAAAAATAGTAAAAATATACCTATGTCATAAACTTCTATTACCATCTATCATTTATAGAATCTATCACAACTATTAAAAACTTTTGTTAGGTGGTGTAAATAGTTTTTTTTTTTTTTTTTTGTTATACTAATACAATTTTTGTTATAGTATTACTATTGGTATCAATCCGAACATACTTTTTAAATTATACCCTAATAATTGTATCAAATTAAAAATCTTAAATTTTTATGTGTGTCATTTGATGCTCGAAATTAAAAAAGAATTTATGAGGAAATTTTTTACGGTAGAAAAAATGTCAAACTATTTACAGAAAATAGAAAAAAAAATACTGATGGATAAATTAGACTTCAGCATTTATAACATATAGATTTTGATATTCTATCAAGCATTTATCACAACTAATTTTATTATTATCTGTAAATAGATTTTTTATTTTTCTATTTTAAAAACTTTTCAATTTATAATTATAGTAATTTATAAGGTCTAAACTTTTATAAACAAATCAAAAAATTTATCAGGGTTGATTAGTTAATTATAATGAATAAATTGATTAGCTTGGGAAGAGTTGGGATTAAATTATAAGTTTTAAACATGAAATTTGAGGTGTAAATTAGTAGAATAATGGAAGTTGAGAAGTTTAAATGAATAGAATTATTAGTTCTGATTTTAATACGGAAGAAGTAATGATTTAATTGGGAAATTTTTCAGTCGGAAGATGACGGGCATGGAGGGAGGAGGAAGAAGGGGTTGAAAGAGAAGGTGAAGGAGAAGCTGCCAGGACACCATGAGCCACAAGCAGTGTCAACCACCACGCCCGGTGGTTACTCGTCGGTGGAGCACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTGCCGGGACATCACTGA

mRNA sequence

ATGGCGCATTACCAATCTGGAACCGATCAGTACGGCAATCCAATTCGCCAAACTGATGAATATGGCAACGTCATCTCCGAGACCGCTCAGTACGGTGACCCCCTTCGCCGGACGGGTGAGTTCCGTGAGACGGACCAGTATGGAAACCCCGTGCGTCGGACTGATGAGTACGGTAATCAATTCGGCACCGGCACTGGCACCGGCGGCACGTATGAGACGGGAGGGTACGGTGGCACCGGTTACGGAGGTGGACACAAGCAGCATAATAAGAGCATGGAGGCATACTTCATCGCTCTGGAAGCTCCATCGGAAGATGACGGGCATGGAGGGAGGAGGAAGAAGGGGTTGAAAGAGAAGGTGAAGGAGAAGCTGCCAGGACACCATGAGCCACAAGCAGTGTCAACCACCACGCCCGGTGGTTACTCGTCGGTGGAGCACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTGCCGGGACATCACTGA

Coding sequence (CDS)

ATGGCGCATTACCAATCTGGAACCGATCAGTACGGCAATCCAATTCGCCAAACTGATGAATATGGCAACGTCATCTCCGAGACCGCTCAGTACGGTGACCCCCTTCGCCGGACGGGTGAGTTCCGTGAGACGGACCAGTATGGAAACCCCGTGCGTCGGACTGATGAGTACGGTAATCAATTCGGCACCGGCACTGGCACCGGCGGCACGTATGAGACGGGAGGGTACGGTGGCACCGGTTACGGAGGTGGACACAAGCAGCATAATAAGAGCATGGAGGCATACTTCATCGCTCTGGAAGCTCCATCGGAAGATGACGGGCATGGAGGGAGGAGGAAGAAGGGGTTGAAAGAGAAGGTGAAGGAGAAGCTGCCAGGACACCATGAGCCACAAGCAGTGTCAACCACCACGCCCGGTGGTTACTCGTCGGTGGAGCACGGTGGGCAGCATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAGCTGCCGGGACATCACTGA

Protein sequence

MAHYQSGTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDEYGNQFGTGTGTGGTYETGGYGGTGYGGGHKQHNKSMEAYFIALEAPSEDDGHGGRRKKGLKEKVKEKLPGHHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH

Homology

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BLAST of HG10002003 vs. NCBI nr
Match: XP_008452109.1 (PREDICTED: dehydrin DHN1 [Cucumis melo] >KAA0044783.1 dehydrin DHN1 [Cucumis melo var. makuwa] >TYK16682.1 dehydrin DHN1 [Cucumis melo var. makuwa])

HSP 1 Score: 266.2 bits (679), Expect = 2.0e-67
Identity = 142/177 (80.23%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQS-GTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQS GTDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNPVRRTD+ +G
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGG GYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPG--HHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPG  HHE QAVSTTTPGGY+S EHGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

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BLAST of HG10002003 vs. NCBI nr
Match: XP_038902571.1 (dehydrin Xero 1-like [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67
Identity = 138/173 (79.77%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MAHYQSGTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDEYGNQ 60
           MAHYQSGTDQYGNPIRQTDEYGNVIS+TAQYGDPLRRTGEFRETDQYGNPV RTDE+GN 
Sbjct: 1   MAHYQSGTDQYGNPIRQTDEYGNVISDTAQYGDPLRRTGEFRETDQYGNPVHRTDEFGNP 60

Query: 61  FGTGTGTGGTYETGGYGGTGYGG----GHKQHNKSMEAYFIALEAPSEDDGHGG-RRKKG 120
               TGTGGTYETGGYGGTGYGG     HK+H   +     +  + SEDDGHGG RRKKG
Sbjct: 61  I--STGTGGTYETGGYGGTGYGGEHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRRRKKG 120

Query: 121 LKEKVKEKLPG-HHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           LKEKVKEK+PG HHEPQA+STTTPGGYSS ++GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 LKEKVKEKMPGHHHEPQAMSTTTPGGYSSAQYGGQHEKKGIMEKIKEKLPGHH 171

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BLAST of HG10002003 vs. NCBI nr
Match: XP_011653150.2 (dehydrin Rab18 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 141/177 (79.66%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQSG-TDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNP RRTD+ +G
Sbjct: 136 MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 195

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGGTGYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 196 NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 255

Query: 121 KKGLKEKVKEKLPGH--HEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPGH  HE QAVSTTTPGGY+S E+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 256 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 312

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BLAST of HG10002003 vs. NCBI nr
Match: KGN53289.1 (hypothetical protein Csa_015043 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 141/177 (79.66%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQSG-TDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNP RRTD+ +G
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGGTGYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGH--HEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPGH  HE QAVSTTTPGGY+S E+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

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BLAST of HG10002003 vs. NCBI nr
Match: XP_022942609.1 (dehydrin Rab16B-like [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 6.8e-60
Identity = 125/176 (71.02%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MAHYQSGTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDEYGNQ 60
           M+H+QSGTDQYGNP+RQTDEYGNVI  T Q  DP  RTGEFRETDQYGNPVRR  EYG+ 
Sbjct: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQRVDPHHRTGEFRETDQYGNPVRRGGEYGDP 60

Query: 61  FGTGTGTGGTYETGGYGGTGYGGGHKQHNKS-----MEAYFIALEAPSEDDGHGGRRKKG 120
                GTGGTYETGG+GG GYGGGH+Q +K        +   +  + SEDDGHGGRRKKG
Sbjct: 61  I----GTGGTYETGGHGGVGYGGGHQQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKG 120

Query: 121 LKEKVKEKLPGHH----EPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           LKEK+KEKLPGHH    +P A STTTPGGYSSVEHGGQHEKKGIM+KIKEKLPGH+
Sbjct: 121 LKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 172

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BLAST of HG10002003 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-22
Identity = 87/196 (44.39%), Postives = 100/196 (51.02%), Query Frame = 0


Query: 4   YQSGTDQYGNPIRQTDEYG--NVISETAQYGDPLRRTG------------EFRETDQYGN 63
           Y   TD+YGNPIRQT E+G         QYG      G              ++TDQYG 
Sbjct: 8   YGRQTDEYGNPIRQTGEFGATGAYGANQQYGTTGTTVGYGTDQCVTTVTTGAQKTDQYGT 67

Query: 64  PVRRTDEYG-NQFGTGTGTGGTYETGG---------YGGTGYGGGHKQHNKSMEAYFIAL 123
           P   T  YG +Q+GT TGT G Y T G          G  G GGGH++   S        
Sbjct: 68  P-GTTGAYGTDQYGT-TGTTGEYGTHGGGIAPGATDAGLAGGGGGHRRLGSSG------- 127

Query: 124 EAPSEDDGHGGRRKKGLKEKVKEKLP--GHHEPQAVSTTTPGGYSSVEHGG------QHE 168
            + SEDDG GGRRKKG+KEK+KEKLP  GH + Q   T    G    EHGG        E
Sbjct: 128 SSSSEDDGQGGRRKKGIKEKIKEKLPGGGHGDDQTHPTPPGSGGYGYEHGGAAESPEHEE 187

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BLAST of HG10002003 vs. ExPASy Swiss-Prot
Match: P30185 (Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.3e-20
Identity = 77/186 (41.40%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 1   MAHYQS-----GTDQYGNPIRQT-DEYGNVIS----ETAQYGDPLRRTGEFRETDQYGNP 60
           MA YQ+      TD+YGNPI+Q  DEYGN +      T   G      G       YG+ 
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSG 60

Query: 61  VRRTDEYGNQFGTGTGTGGTYETGGYGGTGYGGGHKQHNKS-------MEAYFIALEAPS 120
            +     G  +GTGTGT G + TG  GG  + G  + H +S       +        + S
Sbjct: 61  GQGYGTGGQGYGTGTGTEG-FGTG--GGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS 120

Query: 121 EDDGHGGRRKKGLKEKVKEKLPGHHEPQAVSTTTPG---GYSSVEHGGQ-HEKKGIMEKI 166
           EDDG GGRRKKG+ +K+KEKLPGHH+    +    G   GY +  +GG+ HEKKG+M+KI
Sbjct: 121 EDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDKI 180

[Close]

BLAST of HG10002003 vs. ExPASy Swiss-Prot
Match: P12950 (Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 8.7e-18
Identity = 71/168 (42.26%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 30  QYGDPLRR-TGEFRETDQYGNPVRRTDE--YGNQFGTGTGTGGTYETGGYGGTGYGGGH- 89
           +YG   +R  G     DQYGNPV   +    G + GTGT TGG  + G +GG G GGG  
Sbjct: 2   EYGQQGQRGHGRTGHVDQYGNPVGGVEHGTGGMRHGTGT-TGGMGQLGEHGGAGMGGGQF 61

Query: 90  ---KQHNKS---MEAYFIALEAPSEDDGHGGRRKKGLKEKVKEKLP-GHHEPQAVSTTTP 149
              ++ +K+   +     +  + SEDDG GGRRKKG+KEK+KEKLP GH + Q  + TT 
Sbjct: 62  QPAREEHKTGGILHRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHKDDQHATATTG 121

Query: 150 GGYSSVEHGGQ-------------------HEKKGIMEKIKEKLPGHH 168
           G Y    H G                     EKKGIM+KIKEKLPG H
Sbjct: 122 GAYGQQGHTGSAYGQQGHTGGAYATGTEGTGEKKGIMDKIKEKLPGQH 168

[Close]

BLAST of HG10002003 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 9   DQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVR-RTDEYGNQ---FGTG 68
           D+ GNPI  TD YGN +  + ++G+P+  TG      QY + V     EY  +    G  
Sbjct: 6   DERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVTGNIAEYPTEAPPAGVA 65

Query: 69  TGTGGTYETGGYGGTGYGGGHKQHNKSMEAYF----IALEAPSEDDGHGGRRKKGLKEKV 128
            GTG    T     T      ++H+ S+  +      +  + SEDDG GGRRKK +K+K+
Sbjct: 66  AGTGAAATTAAGVTTSETTTGQEHHGSLGEHLRRSGSSSSSSSEDDGQGGRRKKSIKDKI 125

Query: 129 KEKLPG--HHEPQA---------VSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           K+KL G  H + Q           +TTT  G ++ +H   HEKKGI+EKIKEKLPGHH
Sbjct: 126 KDKLGGGKHKDEQTPTTATTTGPTTTTTTTGAAADQH---HEKKGILEKIKEKLPGHH 180

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BLAST of HG10002003 vs. ExPASy Swiss-Prot
Match: P22240 (Abscisic acid and environmental stress-inducible protein TAS14 OS=Solanum lycopersicum OX=4081 GN=TAS14 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-17
Identity = 66/146 (45.21%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 29  AQYGDPLRRTGEFRETDQYGNPVRRTDEY-----GNQFGTGTGTGGTY-ETGG-YGGTGY 88
           AQYG+      + R+TD+YGN V+ T  Y     G   G GTGTGG    TGG YG  G 
Sbjct: 2   AQYGN----QDQMRKTDEYGNHVQETGVYQGTGTGGMMG-GTGTGGMMGGTGGEYGTQGM 61

Query: 89  GGGHKQHNKSMEAYFIALEAPSEDDGHGGRRKKGLKEKVKEKLPGHHEPQAVSTTTPGGY 148
           G G   H    +       + SEDDG GGRRKKGLKEK+ EK+PG HE +   TT     
Sbjct: 62  GTGTHHHEGQQQLRRSDSSSSSEDDGEGGRRKKGLKEKIMEKMPGQHEGEYGQTT----- 121

Query: 149 SSVEHGGQHEKKGIMEKIKEKLPGHH 168
                    EKKG+M+KIK+K+PG H
Sbjct: 122 -------GEEKKGMMDKIKDKIPGMH 130

[Close]

BLAST of HG10002003 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.5e-68
Identity = 142/177 (80.23%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQS-GTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQS GTDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNPVRRTD+ +G
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGG GYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPG--HHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPG  HHE QAVSTTTPGGY+S EHGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of HG10002003 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.5e-68
Identity = 142/177 (80.23%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQS-GTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQS GTDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNPVRRTD+ +G
Sbjct: 1   MAHYQSGGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRTDDVFG 60

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGG GYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPG--HHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPG  HHE QAVSTTTPGGY+S EHGGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of HG10002003 vs. ExPASy TrEMBL
Match: A0A0A0KWM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 141/177 (79.66%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAHYQSG-TDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDE-YG 60
           MAHYQSG TDQYGNPIRQTDEYGNVISET QYGDPLRRTGEFRETDQYGNP RRTD+ +G
Sbjct: 1   MAHYQSGRTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPGRRTDDVFG 60

Query: 61  NQFGTGT--GTGGTYETGGYGGTGYGGG----HKQHNKSMEAYFIALEAPSEDDGHGGRR 120
           N  GTGT  GTGGTYET GYGGTGYGGG    HK+H   +     +  + SEDDGHGGRR
Sbjct: 61  NPVGTGTGMGTGGTYETTGYGGTGYGGGHHQQHKEHGGILHRSGSSSSSSSEDDGHGGRR 120

Query: 121 KKGLKEKVKEKLPGH--HEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           KKGLKEKVKEKLPGH  HE QAVSTTTPGGY+S E+GGQHEKKGIMEKIKEKLPGHH
Sbjct: 121 KKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKIKEKLPGHH 177

[Close]

BLAST of HG10002003 vs. ExPASy TrEMBL
Match: A0A6J1FRT8 (dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 125/176 (71.02%), Postives = 139/176 (78.98%), Query Frame = 0


Query: 1   MAHYQSGTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDEYGNQ 60
           M+H+QSGTDQYGNP+RQTDEYGNVI  T Q  DP  RTGEFRETDQYGNPVRR  EYG+ 
Sbjct: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQRVDPHHRTGEFRETDQYGNPVRRGGEYGDP 60

Query: 61  FGTGTGTGGTYETGGYGGTGYGGGHKQHNKS-----MEAYFIALEAPSEDDGHGGRRKKG 120
                GTGGTYETGG+GG GYGGGH+Q +K        +   +  + SEDDGHGGRRKKG
Sbjct: 61  I----GTGGTYETGGHGGVGYGGGHQQQHKEHGGVLRRSGSSSSSSSSEDDGHGGRRKKG 120

Query: 121 LKEKVKEKLPGHH----EPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           LKEK+KEKLPGHH    +P A STTTPGGYSSVEHGGQHEKKGIM+KIKEKLPGH+
Sbjct: 121 LKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMDKIKEKLPGHN 172

[Close]

BLAST of HG10002003 vs. ExPASy TrEMBL
Match: A0A6J1J0Z6 (dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.3e-60
Identity = 124/176 (70.45%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 1   MAHYQSGTDQYGNPIRQTDEYGNVISETAQYGDPLRRTGEFRETDQYGNPVRRTDEYGNQ 60
           M+H+QSGTDQYGNP+RQTDEYGNVI  T Q+ DP  RTGEFR+TDQYGNPVRR  EYG  
Sbjct: 1   MSHFQSGTDQYGNPVRQTDEYGNVIHGTGQHVDPHHRTGEFRDTDQYGNPVRRGGEYGEP 60

Query: 61  FGTGTGTGGTYETGGYGGTGYGGGHKQHNKS-----MEAYFIALEAPSEDDGHGGRRKKG 120
                GTGGTYETGG+GG GYGGGH+Q +K        +   +  + SEDDGHGGRRKKG
Sbjct: 61  I----GTGGTYETGGHGGVGYGGGHQQQHKEHGGILRRSGSSSSSSSSEDDGHGGRRKKG 120

Query: 121 LKEKVKEKLPGHH----EPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           LKEK+KEKLPGHH    +PQA STTTPGGYSSVEHGGQ+EKKGIM+KIKEKLPGH+
Sbjct: 121 LKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMDKIKEKLPGHN 172

[Close]

BLAST of HG10002003 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 98.2 bits (243), Expect = 6.6e-21
Identity = 77/186 (41.40%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 1   MAHYQS-----GTDQYGNPIRQT-DEYGNVIS----ETAQYGDPLRRTGEFRETDQYGNP 60
           MA YQ+      TD+YGNPI+Q  DEYGN +      T   G      G       YG+ 
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSG 60

Query: 61  VRRTDEYGNQFGTGTGTGGTYETGGYGGTGYGGGHKQHNKS-------MEAYFIALEAPS 120
            +     G  +GTGTGT G + TG  GG  + G  + H +S       +        + S
Sbjct: 61  GQGYGTGGQGYGTGTGTEG-FGTG--GGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS 120

Query: 121 EDDGHGGRRKKGLKEKVKEKLPGHHEPQAVSTTTPG---GYSSVEHGGQ-HEKKGIMEKI 166
           EDDG GGRRKKG+ +K+KEKLPGHH+    +    G   GY +  +GG+ HEKKG+M+KI
Sbjct: 121 EDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDKI 180

[Close]

BLAST of HG10002003 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 77/185 (41.62%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 1   MAHYQS-----GTDQYGNPIRQT-DEYGNVIS----ETAQYGDPLRRTGEFRETDQYGNP 60
           MA YQ+      TD+YGNPI+Q  DEYGN +      T   G      G       YG+ 
Sbjct: 1   MASYQNRPGGQATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSG 60

Query: 61  VRRTDEYGNQFGTGTGTGGTYETGGYGGTGYGGGHKQHNKSMEAYFIAL------EAPSE 120
            +     G  +GTGTGT G + TG  GG  + G  + H +S       L       + S 
Sbjct: 61  GQGYGTGGQGYGTGTGTEG-FGTG--GGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSS 120

Query: 121 DDGHGGRRKKGLKEKVKEKLPGHHEPQAVSTTTPG---GYSSVEHGGQ-HEKKGIMEKIK 166
           DDG GGRRKKG+ +K+KEKLPGHH+    +    G   GY +  +GG+ HEKKG+M+KIK
Sbjct: 121 DDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDKIK 180

[Close]

BLAST of HG10002003 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 69/178 (38.76%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 9   DQYGNPIRQTDEYGN-VISETAQYGDPLRRTGEFRETDQY------------GNPVRRTD 68
           D+ GNPI  TD  GN ++  T ++G+P+  TG    T Q+             + V  T 
Sbjct: 6   DEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTSTVGETH 65

Query: 69  EYGNQFGTGTGTGGTYETGGYGGTGYGGGHKQHNKSMEAYF----IALEAPSEDDGHGGR 128
                 G G  T  T  TG   GTG     +QH+ S+E +      +  + SEDDG GGR
Sbjct: 66  PAAAPAGAGAATAAT-ATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDGQGGR 125

Query: 129 RKKGLKEKVKEKLPG--HHEPQAVSTTTPGGYSSVEHGGQHEKKGIMEKIKEKLPGHH 168
           RKK +KEK+KEK     H + Q  +T T  G ++ +    HEKKGI+EKIK+KLPGHH
Sbjct: 126 RKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQ--PHEKKGILEKIKDKLPGHH 180

[Close]

BLAST of HG10002003 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13
Identity = 58/127 (45.67%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 52  RRTDEYGNQFGTGTGTGGTYETGGYGGTGYGGG-----HKQHNKSMEAYFIALEAPSEDD 111
           ++ D++GN F   TG  GT   GG      GGG     H+  + S         + SEDD
Sbjct: 15  QQLDQFGNPFPATTGAYGT--AGGAPAVAEGGGLSGMLHRSGSSS--------SSSSEDD 74

Query: 112 GHGGRR--KKGLKEKVKEKLPGHHEPQAV----STTTPGGYSSVEHGGQHEKKGIMEKIK 168
           G GGRR  KKG+ EK+KEKLPGHH+        STTT     +V     HEKKG+MEKIK
Sbjct: 75  GLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTV----HHEKKGMMEKIK 127

[Close]

BLAST of HG10002003 vs. TAIR 10
Match: AT1G20440.1 (cold-regulated 47 )

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 40/67 (59.70%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 109 GGRRKKGLKEKVKEKLPGHHEPQA-----VSTT--TPGGYSSVEHG-GQHEKKGIMEKIK 168
           G   KKGL EK+KEKLPGHH+  A     VSTT   P   S VEH   + EKKG++EKIK
Sbjct: 132 GEEDKKGLVEKIKEKLPGHHDKTAEDDVPVSTTIPVPVSESVVEHDHPEEEKKGLVEKIK 191

The following BLAST results are available for this feature:

BLAST of HG10002003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452109.1	2.0e-67	80.23	PREDICTED: dehydrin DHN1 [Cucumis melo] >KAA0044783.1 dehydrin DHN1 [Cucumis mel...	[more]
XP_038902571.1	2.6e-67	79.77	dehydrin Xero 1-like [Benincasa hispida]	[more]
XP_011653150.2	2.2e-66	79.66	dehydrin Rab18 [Cucumis sativus]	[more]
KGN53289.1	2.2e-66	79.66	hypothetical protein Csa_015043 [Cucumis sativus]	[more]
XP_022942609.1	6.8e-60	71.02	dehydrin Rab16B-like [Cucurbita moschata]	[more]

BLAST of HG10002003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8CVF3	5.8e-22	44.39	Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1	[more]
P30185	9.3e-20	41.40	Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1	[more]
P12950	8.7e-18	42.26	Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2	[more]
P21298	1.5e-17	38.20	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
P22240	3.3e-17	45.21	Abscisic acid and environmental stress-inducible protein TAS14 OS=Solanum lycope...	[more]

BLAST of HG10002003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYN8	9.5e-68	80.23	Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 ...	[more]
A0A1S3BTX2	9.5e-68	80.23	dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1	[more]
A0A0A0KWM9	1.0e-66	79.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1	[more]
A0A6J1FRT8	3.3e-60	71.02	dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1	[more]
A0A6J1J0Z6	4.3e-60	70.45	dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1	[more]

BLAST of HG10002003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66400.1	6.6e-21	41.40	Dehydrin family protein	[more]
AT5G66400.2	3.3e-20	41.62	Dehydrin family protein	[more]
AT2G21490.1	1.8e-18	38.76	dehydrin LEA	[more]
AT3G50980.1	2.3e-13	45.67	dehydrin xero 1	[more]
AT1G20440.1	4.7e-11	59.70	cold-regulated 47	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 8..167 e-value: 5.2E-26 score: 92.1
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..41 coord: 34..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..167
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 1..41 coord: 34..167
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 158..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002003.1	HG10002003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol