HG10001967 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001967
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	sigma intracellular receptor 2-like
Location	Chr11: 2195904 .. 2196558 (+)
RNA-Seq Expression	HG10001967
Synteny	HG10001967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTCTTCTCAAGCTCTTCGATTCAATTCTGCTTGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCCCAGTTATTACTCCCTCAACCCCTTTTCCCCGATCTTCTCATTGATTTCAAAAACCAGTACATCACGCAATCGGGAGATTATCTGATGGCCGAGGCCCCTCACTTTTTCATTGGCTTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACACTTCTCAATCTCTATGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGTAGTTTACTTTTCTGCTCAGATCATGTCATTGTTGTTCAAACCTTTACTTCTCTTCTTATCATTGTTTTCTGATTCTACTTCTTTGAAGATGGAAGTAAAGCTTTCCTTTGTTTCATACACTTTCTTTTTCCTTTTCCCAGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATATATCTCCCTTTCTTGGGATTGGGAGTTTTCACCATGCTACGTGGCCTGCTGCCGCGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGTAGCTGGACCATCAATTGCCACAAAAAAGAAGGCCTGA

mRNA sequence

ATGGGGGTTCTTCTCAAGCTCTTCGATTCAATTCTGCTTGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCCCAGTTATTACTCCCTCAACCCCTTTTCCCCGATCTTCTCATTGATTTCAAAAACCAGTACATCACGCAATCGGGAGATTATCTGATGGCCGAGGCCCCTCACTTTTTCATTGGCTTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACACTTCTCAATCTCTATGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATATATCTCCCTTTCTTGGGATTGGGAGTTTTCACCATGCTACGTGGCCTGCTGCCGCGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGTAGCTGGACCATCAATTGCCACAAAAAAGAAGGCCTGA

Coding sequence (CDS)

ATGGGGGTTCTTCTCAAGCTCTTCGATTCAATTCTGCTTGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCCCAGTTATTACTCCCTCAACCCCTTTTCCCCGATCTTCTCATTGATTTCAAAAACCAGTACATCACGCAATCGGGAGATTATCTGATGGCCGAGGCCCCTCACTTTTTCATTGGCTTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACACTTCTCAATCTCTATGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATATATCTCCCTTTCTTGGGATTGGGAGTTTTCACCATGCTACGTGGCCTGCTGCCGCGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGTAGCTGGACCATCAATTGCCACAAAAAAGAAGGCCTGA

Protein sequence

MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

Homology

[Close]

BLAST of HG10001967 vs. NCBI nr
Match: XP_038876784.1 (sigma intracellular receptor 2-like [Benincasa hispida])

HSP 1 Score: 283.9 bits (725), Expect = 9.3e-73
Identity = 152/170 (89.41%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG LLKLFDSIL VSFLVHALAPPLIGAQLLLPQ LFPDLLI FKN YITQSGDYLMAEA
Sbjct: 1   MGALLKLFDSILFVSFLVHALAPPLIGAQLLLPQTLFPDLLIHFKNLYITQSGDYLMAEA 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFIGLLWLELLLQWPLTLLNLYAIS AK WLHTTCLIYGVSLFSAMAAIAAEL+GSQ+
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISAAKPWLHTTCLIYGVSLFSAMAAIAAELLGSQK 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL +YLPFLGLGVF  LRGL+PRCSKATA GHG  AGPSIATKKKA
Sbjct: 121 ASGILLNMYLPFLGLGVFATLRGLMPRCSKATAIGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. NCBI nr
Match: XP_008453730.1 (PREDICTED: transmembrane protein 97-like [Cucumis melo] >KAA0044755.1 transmembrane protein 97-like [Cucumis melo var. makuwa] >TYK16707.1 transmembrane protein 97-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 3.3e-70
Identity = 149/170 (87.65%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. NCBI nr
Match: XP_004149168.1 (sigma intracellular receptor 2 [Cucumis sativus] >KGN53261.1 hypothetical protein Csa_015326 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG +LKLFDS+L V FLVHALAPPLI AQLLLPQ LFP++ I  KN+YIT SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL IY PFL +GV  MLRGLLPRC+KAT TGHG  AGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. NCBI nr
Match: XP_023553153.1 (sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 2.9e-66
Identity = 139/169 (82.25%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MGVLLKLFDS+L VSF VHA+APPLIGAQLLLP  LFPD+LIDFK  YI  SGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK 170
           ASG+LLK+YLPFLGLGV   LRGL+PRCSKATATG     GPSIA KKK
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGD--TVGPSIAGKKK 167

[Close]

BLAST of HG10001967 vs. NCBI nr
Match: KAG6577250.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015340.1 Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 138/169 (81.66%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MGVLLKLFDS+L VSF VHA+APPLI AQLLLP  LFPD+LIDFK  YI  SGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK 170
           ASG+LLK+YLPFLGLGV   LRGL+PRCSKATATG     GPSIA KKK
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDS--VGPSIAGKKK 167

[Close]

BLAST of HG10001967 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-04
Identity = 39/154 (25.32%), Postives = 65/154 (42.21%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           M V  +L + I    F  H     L+  Q +LP  L+P  L+D    Y     D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYA-ISTAKSWLHTTCLIYGVSLFSAMAAIAAELIG-- 120
           P +F   ++ E +LQ P   +  YA       W+    ++Y   + + + AI   ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SQRASGILLKIYLPFLGLGVFTML 142
                     +Q+    L+ IY P+L + V  +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of HG10001967 vs. ExPASy TrEMBL
Match: A0A5D3CY30 (Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005410 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 149/170 (87.65%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. ExPASy TrEMBL
Match: A0A1S3BWY8 (transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 149/170 (87.65%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. ExPASy TrEMBL
Match: A0A0A0KZE5 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG +LKLFDS+L V FLVHALAPPLI AQLLLPQ LFP++ I  KN+YIT SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA 171
           ASGILL IY PFL +GV  MLRGLLPRC+KAT TGHG  AGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHG--AGPSIATKKKA 168

[Close]

BLAST of HG10001967 vs. ExPASy TrEMBL
Match: A0A6J1JCI5 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483157 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 136/169 (80.47%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MGVLLKLFDS+L VS  VHA+APPLIGAQLLLP  LFPD+L+DFK  Y+  SGDYLMAEA
Sbjct: 1   MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLF+AM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMVAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK 170
           ASG+LLK+YLPFLGLGV   LRGLLPRCSKAT TGH    GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHD--VGPSIAGKKK 167

[Close]

BLAST of HG10001967 vs. ExPASy TrEMBL
Match: A0A6J1EU13 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435922 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65
Identity = 136/169 (80.47%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MGVLLKLFDS+L V   VHA+APPLIGAQLLLP  LFPD+L+DFK  Y+  SGDYLMAEA
Sbjct: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK 170
           ASG+LLK+YLPFLGLGV   LRGLLPRCSKAT TGH    GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHD--VGPSIAGKKK 167

[Close]

BLAST of HG10001967 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-36
Identity = 77/154 (50.00%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG L KL D  L V F+  A+  PLI  Q  LP  ++P  L D K++YI   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHF +GL+W ELL  WPL++ N+YAI   KSW  TTCL+YG SL ++MAAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT 155
           AS  LL +Y+PF+G G+  +LRGL+ R +K T +
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGS 154

[Close]

BLAST of HG10001967 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 145.6 bits (366), Expect = 3.7e-35
Identity = 76/169 (44.97%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG   KL D++L + F + A+  PLI  Q  LP  +FP  ++D    YI + GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHF +GL+W ELLL WPL+++N+YAI   KSW  TT ++YG S+ ++MAAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK 170
           AS  LL +Y+PF+G+G+  +LRGLL   S++  +G      P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLL---SQSNKSGGAVGKRPAILARRK 166

[Close]

BLAST of HG10001967 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG L KL +  L   F + A+  PL+  Q+L P  ++P LL D K+ Y ++  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GL+W E++   PL+++N+YAI T+KSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT 155
            +  LL  YLPF+GL +  MLRGL+  CS   +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV-TCSTKRST 152

[Close]

BLAST of HG10001967 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEA 60
           MG L KL +  L   F + A+  PL+  Q+L P  ++P LL D K+ Y ++  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GL+W E++   PL+++N+YAI T+KSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT 155
            +  LL  YLPF+GL +  MLRGL+  CS   +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV-TCSTKRST 152

The following BLAST results are available for this feature:

BLAST of HG10001967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876784.1	9.3e-73	89.41	sigma intracellular receptor 2-like [Benincasa hispida]	[more]
XP_008453730.1	3.3e-70	87.65	PREDICTED: transmembrane protein 97-like [Cucumis melo] >KAA0044755.1 transmembr...	[more]
XP_004149168.1	2.6e-67	82.35	sigma intracellular receptor 2 [Cucumis sativus] >KGN53261.1 hypothetical protei...	[more]
XP_023553153.1	2.9e-66	82.25	sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577250.1	1.4e-65	81.66	Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]

BLAST of HG10001967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	7.3e-04	25.32	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of HG10001967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CY30	1.6e-70	87.65	Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BWY8	1.6e-70	87.65	transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1	[more]
A0A0A0KZE5	1.3e-67	82.35	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4...	[more]
A0A6J1JCI5	1.5e-65	80.47	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483157 ...	[more]
A0A6J1EU13	3.4e-65	80.47	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143592...	[more]

BLAST of HG10001967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05210.1	4.3e-36	50.00	Transmembrane protein 97, predicted	[more]
AT2G32380.1	3.7e-35	44.97	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.1e-28	44.81	Transmembrane protein 97, predicted	[more]
AT1G05220.2	1.1e-28	44.81	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..156 e-value: 1.1E-25 score: 88.1
None	No IPR available	PFAM	PF05241	EBP	coord: 42..133 e-value: 2.6E-13 score: 50.3
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..161
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..161
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 13.932526

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001967.1	HG10001967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane