HG10001959 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001959
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Location	Chr11: 2108659 .. 2116547 (-)
RNA-Seq Expression	HG10001959
Synteny	HG10001959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCGCTGTGTTTCTCGTGGTCTTCGCGCTTCTTCCTTCTCCAGGAAATCGTCCCCCAATGATCACCTCAGATCTCAATTTTCTAGATTCTTCTCCGTCGATTCGGTATAACCTTCCATCATATGTCTTTATTATTGAATATGAGCTTGAACGTTCGTCTGGATCTTTGATTTTATTATGTTTTCCTGTTTCTCGCGGTTTTTCGTCTTCTTTTTTTCTTTGTCGATGATGGCATGTGGAATGGATGAACAAACTATTCTATATCATTCTCTCGTTGTAGTTGTTTTATTTTGGGTCATCTGAACAAAAATCTCTGTATTTTTTTATGCCACCTTCCTGGATTGTTAGTGAACCGCGCTTTTCAATATTGAGTTCATTTGGCTAATTGCGTGCACAAGGGAGTGTAATGTAATTCTTTTTTGCATTGGATCCATTAATTGTGCTGATCGTAGCTTTCTCTCTCAAGTTTCTTTCTTACGGCTCCGGTATCTGTGTCAAAACTTCTCTTAAAGATGGTGACTGCTGATAGGTTTTGTTAAATATTAAATTATTTCTTCTTTGGCTCCTGGCAGACAGCAGGTCGCTCCTCATACACTGTGGTTGATCACACATACGATGCGGTTGTGGTAGGCGCGGGTGGTGCAGGGCTTCGAGCTGCTATAGGATTGTCAGAGCATGGATTTAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCTCACACGGTTGCAGCTCAGGTACAGGGAATCCGGACTTATAGTAACTTACTGTATGGTGGGAATGCTATTTTTTCTCTCCGTTTATGTTAAAACGTCTTGTTTCTCAGACTCTGGCCCTCCCCTACATGTGGATTATTTTTGGTTTTCTCCTACAGGGTAAAATTAAAACTTTATCATCGAAGTTTGAATGTCACATTTTATTATTCAGGTGATTGCTTCTTTTGATGATGTCCAAAACCCAAGCCCTGAACCCTCCAAAATCCCCGATGATGCCTCACCCACTAGCACGACTTTATGCTATTGACCAACAGGAGTTTACTTTCTCTCATCTTTCATTGGTTGGTCTTCCAGCCCAAATCAACTCCCTTGAAGAACAGAACATTCAGACTGAAAACCTGCTTGGACAGAGGCTGGTTTGACACCTTGTTTTGGGGCACAAGCCAAGCCAATCTTGCAGTCCTCCCCACGTCTGAACCCCTCCTCCCCAACTAAGTAGAATCTAGAAATTTGGCTGAGAGCTGTGGACCTTTGCATTGTCTCTCCATTCAACATGGATGAGCATATCTCTCTATATTGGATACTTAACTTTGTCTAGTTTGGTGCTGAGTAATACCTCTCTTAACTGGATAGATTTTTGCTCACCAACAAGTGCCTTGGCATATTTGGTGCAACTCATCTTATGTTTCTTGATAGAGTCACTTCAGACCATCATCCTTTGGCCTTATCCTTTGGAGACATTCCTTGGGGACCTTGTCCTTTTTCGGTTTGAGAATTATTGGCTGCAACATCAATCTTTCGTTGAGGTTTTAGATAATTGGTGGCATCGGAATCCGATTCAAGGCTGGTTGGAACATGGGTTTATGAAGCAATTGAAAGGCTTGAAAGTTGAGCTTCTAAATTGAAACAAGTCCCAACATGTTGTGGCTTCTCGAATCCCTCTCTTATATCCCAATTGAAAGCTTTGGACAAATTCAGAGGTTAGTGGTTAATTAACAACTAGTTAGGAGACTTGCTATTCTCTTAAGGGAAAAAATTGAAGATCTAACAAGCCAAGACATTTATTGACATTAGCGTTGTAAATTGAAATGGTTCAAGGATGGTGATGAAAGTACAAATTTTTTCCATCGTATATTGCTAATTGCAAAAGAAAGAATTCGATGTTAGAGGTTCTTTATAGGGATGGTACCAGTTTACTCACTTCTCGGGATATTGAGAATGAATTAAGTGATTCCTTCTAGAAATCCTTCACCAAGGATAATCATCTTGATTCCTTGTTTCCTTCCAACTAATTTTGATTAGAACACTATTAAACAAGACGTGACGGTTTCTTTTATTTTTTTTTCCTTTTTTTCTTCTTCTTTTTTTCTTTATTATTATTGAACAAGATGTGATGGTGATGCTTCATGATTTCTGTTCTTCTGGAATTATTAATGTGGCATTGAATGAACCTACATCTATCTAATTTTGAAGTGCATTGATTCCAAATCTGTAACTGACTATTGTCTGATCAGTCTCATTATGTGTGCATACAAGTTTAGTTATGGACGCTTCTTTAATGGCCAATGAATTGGTTGATGATTGTAATCTCTCCCTAGAAGGGTGTGGTTCTAAAATTGGACCTCGAAAAAGCTTTTGGTAAAGTTGATTGAGATTTTCTGGATGTTATTCTTCATGCAAAAGGTTTTGGTTCAACTTGGGAAAATTGGATTTGTGGTTGTATCTCAAGTGTGAACTAGTTGATTACCATTAGGGTTTGTTTGGGAGGATGGAATGTAATCAGGATTGGATTGAAAATGGTGGGAAAGGAATGTAATAAGGATTACAAATAGGGTCATTGTTATGCAATCTGTTTTAGAGAAAATTCAGCACGAGCTTTATAGTTGGAAATATGCATTTATTTTAAAAGGAGGTAGGCGTACCCTTATCCAAAGCTACATTATCTAGTACGTCGATATATTACATGTTATTTAAACTTCCAAGAAAGATTTCCAACTCTTTGAATAAGCTTGTTCATGATTTCTTTTGGGGAGGTTCCAGAGGAGAAGGTTGAATGCATACCGTTGATTGGAAAATAACTTAGCTTCCTAAACAGCTGGGGGGTATTGGCATCAACAACTTTCAACATCGGAATTTGGCTCTTTTGACAAAATGGTTTAGGAGATCGTTAAACGAGGGAGATGTTATGTGGCACAAACTTATTGCCGCAAAGTATTACGGCGTTGAGATTGATTTTGTTTGGCCACATCTCATTCTAAGAGGCTCTTACAAGAAACCTTGGTGTCATTATTTGCTCTACTTTGTATCTTGTTGAGTGCCATGCCTATCGTTGTCTTGGTAATGGTAGGTCAATTTCATTTTGGCATGATTCTTGGTTGAGCTATGGAGCTATTGATACAGCCTTCCCTTGTCTTTTTAGACTCATTTCTCGGTCAAATAGTACAGTTGTTGACGTCTAGATTCCGTCGACTACTGCTACCTAGGAGCTAATAAAGAACGTGGGTGTCATTTGGTATCGTGCAAAATTCAACTTTCCAATGATTGGGAGTGGCCGGTTTAGGCAACTTAAAAGTAAAGAAAGTGATCTCTTGCTAAATGGATTAGGAGATATCATGTGAAGAAAGCTCTTTCCACTTATGGCCGAATACCTACCAAATTTCTACATTCTTCAAGAGGCTTATGGAAATCTATTCATAGGCTTGTATATTGTCTCAATAGGATCAAGATTCATATTCGGAATGGCACTTCTACCATTTTTTGAAACAGTTTGTGGATTGGAAATGCTCCTTTCTATGTGACTATCACAACGATTCTCTCGCTTCTATGAGAAACGTAGACTTTTGTAACATATCCTCCCAAATTTGGGACCTTGGTTCTAGGTGGAATTATGTTGGATGGAAAATAAGCGCAAGTATATATTAAAAGCAGAAGCAACAATTTTTACACAGTGCATGTGCTTTCATAAACCTGACATCTCCCTGTCCCCATTGTCAACATCGGCTTCTGTGTTTTTCTTCTTCTTCATTTTTTTATTACACATATGTGCGTTATTAATATTGACTGGTTGGTTGAGATTCTCAGACATTGGAACTTTAGGAACAGAGGCAAGGTTTTATGGTCTATGGCAGTCCGGGTTCTTATTTGGAATCTTTGGCTTGAAAGGAATCATCATACTTTTGAGGACAAGGGTTCTTCTTCTGTATTTTTTGTAACAACACTCAATTCCTTGCTTCTTGGTGGTGTTGATGTACGAAAAACAGGAAATTCTTTTGTAATTATAGCTTGTTCAAGATTCAAATGAATGGGAAAGCTCTCTTATAGGTGTCTTTGTTGGGAGGGTGTTCTCTTCCCCTTGCCTTTAGGCTATTTTGTTTTGGGCCTTTTTGTGCACAATAAACTTCATGTTATATACCTTGACATTCCGTTTACACTCCTTTCTCCTGTCATAATGTAACTTAGTATGAAGTTCAATTGGTTTATAGGGAGGTATAAATGCTGCACTGGGAAACATGACTGAGGATGATTGGAGGTGGCACATGTACGACACTGTCAAGGGGAGTGATTGGCTAGGTATGTATTTAGAACTTTGGATAAATTGAAAATCTTGTCATGCAATGTGATGCTTACGTTGTCATTAGTAACTAGCACACACACACAAATTAGAATGCTTGTGGCTTCTTACTCTGCCAATACAAAGCTAGTAACAAAATTTCTATATGGTGCACTTGTATGTGCTGCATTTGTTTGCTGATCCTAAATGATTTGGAACTTGTAGGTGCGCAAAACAAGTCTGTTGTATTGCTATGTATAAGTCAGACTCGCAATATTTGTACATTAAAATCCTTGACCTGTATGTTTTCATGTTCAACAGGTGATCAGGATGCCATTCAATACATGTGTAGAGAAGCACCAAAAGCAGTAATTGAGCTTGAGAATTATGGACTTCCATTTTCTCGTACTGAAGATGGAAAAATTTATCAACGTGCATTTGGTGGTCAGAGCCTCGACTTTGGCAAGGGTAATAATTCATATTATATGTCCTCATTGCCATGTTGGTCTCCCCTTTCACGTTGAGATTCTCATGTCTTCAGTTATTTACATTTACATTGTCTTCTTTGTAGGTGGACAGGCATATCGTTGTGCATGTGCTGCTGATCGAACAGGGCATGCTTTATTGCATACTCTCTATGGCCAGGCTATGAAGCATAACACACAGTTCTTTGTGGAATATTTTGCTTTGGATCTATTAATGAATAGTGATGGTATATAAACTCCACTTTTCCTAAATTTTGCCCGATATTTTGACCTTTCCACTTATTTTTTATGATTAGAGTGCAAATTATTTACTCATGCACTAGCATATCATAAGATAAATCTCAACTCTTGTAGTTGCTTCTTTCTGCATTTTAAGATAATTCTTACATTGGTTACCTTGACCACTCTGATATTGGCATTCCAGGTAGCTGCCAGGGAGTGATAGCATTAAATATGGAGGACGGTACACTACATCGGTTCCGAGCTGCCTCAACAATTTTGGCTACCGGGGTACTGTATGTCATGATGATGATGATCAGATTGTGTAAACTGATGACTTGTGTAAATATAACTCTTATTTTTTTCAGGGTTATGGCAGAGCATATTTCTCTGCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCCATGGTTGCACGAGCCGGGATTCCACTTGAGGTTAATTCTCATTTTCTTGATTTTGGAAGGTTTTGGATAATTTCGGAAACCCTTTTTGCAACTTTTCTTTCCTTTGCTTGCGCAGGATTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTGAAGGTATGAACTCAAATTTGAATAATACTCTTTTTATCGGTTGTTCTTTTTCCCTCTACATGGACGTAATACTGATTTAAATGCAATTCTTTTTTTCTGTAAAATAAGGATCTCGTGGTGAAGGTGGCATTCTTAGGAACAGCGAAGGTGAGCGCTTTATGGAACGATATGCCCCAACAGCAAAGGATCTTGCATCAAGGGATGTTGTCTCAAGATCCATGACTATGGAAATTCGGGAGGGCCGTGGTGTAGGTATGAAGCTTTTATCCCATCTAGAATTAAATAGATGCATCCACGAACTTTCTCCCAGCTATTAAGGCACGGTCAAGTTAATTCAGGGCATCAGAACAAAATAACTGTTTCATAGTATACTGATTTGTTCTTTTCCTGATTTAATATCTTGTTTTGGTAACTAAGTTGATAGCTTTTAACAGGACCACTGAAGGACCACATCTATCTGCATTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTTCCGGGTATCTCAGAAACTGCTGCCATTTTTGCTGGCGTTGATGTTACCAAAGAACCCATTCCAGTCTTACCCACAGTGCACTATAATATGGGTGGAATTCCCACGAATCATTATGGAGAGGTATGAATGAAAATGCAACCCTAAGTGTGCTTTACATTTTTCATTTTTTCTCATCGTAAAATGAAAATATATCCCTTAAGTTCTGATATTATGGATCAGTTAGTCTATTAAATAATTTACAGGTAGATCCAACCGGTGTATTTCTGTTAGTTTTATCTTAACAGTGTGTGCAGAGAAGACCACTAAGGATTGTTTTTGATGAATTAGTCATTTACAAAGACTATATGCTTGATGAGTGAAAAAGTTGGGACTAAAAAAAAATGCCAGGAGTGCTCCCCCTCTCATGACTTTCTAGAATTCTGAATGTCCTCTCTTTTTTCTTCCTGCTCTATCTTCATGTGTAAATTTGTTGTTTATCAGGTAGTTACAATCAAGGGAAATGATCCAGATGCCGTTATTCCAGGATTGATGGCTGCTGGGGAGGCAGCTTGTGCCTCGGTTCATGGTGCCAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCCAATAGGGTAGCAGAGATCAGTAGACCAGGCAAGTTTGTTTGTTTGTTTTTCGGTTCTTTTAAAAAAAGAAATGAAAATTAACGATGAACCCACAACCTAGTCCAACCAATAAAAATAAGAATGTTTTTCTTGATAACGCTAAATAATTATATCTGGGCAATTTGCAGGGGCACAGCAAAAGCCGTTGGAAAAAGATGCTGGTGAGAAGACTATTGCATGGCTAGACAAATTGAGAAACTCAAATGGTTCACTGCCAACCTCAAAGATTCGGTTGAACATGCAACGAGTTATGCAAAACAATGCTGCTGTTTTCCGAACAGAGGAGACCTTGGAAGAAGGTAGCCAAACTGAACAGAGAAAGTTTTAGTTAGAAACTTCTATACTCTCTACAACTCGGCCTCAATTTCTTTTCTGCTTCTGTAGGTTGCAAATTAATTGACAAGGCCTGGGAGAGTTTCCATGATGTGAAGGTCAAAGACAGGGACTTAATATGGTAATAGGATCGTGGTGTTTCTCTGTCTTTCTTTCTTTATTTGTTTTAAGTATTTATTATAATTATAAAGTTCGAGTACTGAATTCTTTCAAGGATTGATCAAAGTTTGTTACTCGTCGAACAGGAACACTGATTTGATGGAGACAATTGAATTGGAAAATCTTTTGATAAATGCATGTATTACCATGCACTCTGCTGAAGCAAGGAAAGAGAGCAGAGGAGCACATGCTCGGGAAGATTTCACAGTTAGTTTTATTTATTTTCTATTATTAATAGTAACACAACACTTTCCTATGACTTCAATATATTAACTTTGTATACACTGGTTATGCAGAAAAGAGATGATGAGAACTGGATGAAGCACACACTGGGGTAACTCTCGTGTTTGACACTTCAAAAGAATATAAGATTGTCCGCTTTTTAGTTAATAAGACCGCTTCTTATTCTTAGTCAGTCACCTTTTCATGTCTTGGGGCTCCTGGTCCATCCCTTAGCTCAACTAGATTAACACTTAATAGTTTGTCTGACTTCAATCAATTAACATCTGCTGTATGTTTTTGATAATGTGATTGAATTTGCAGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACCTGAACACATTGGATGATGAGGTCGAATCATTCCCTCCCAAGGCTCGTGTATACTGA

mRNA sequence

ATGTGGCGCTGTGTTTCTCGTGGTCTTCGCGCTTCTTCCTTCTCCAGGAAATCGTCCCCCAATGATCACCTCAGATCTCAATTTTCTAGATTCTTCTCCGTCGATTCGACAGCAGGTCGCTCCTCATACACTGTGGTTGATCACACATACGATGCGGTTGTGGTAGGCGCGGGTGGTGCAGGGCTTCGAGCTGCTATAGGATTGTCAGAGCATGGATTTAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCTCACACGGTTGCAGCTCAGGGAGGTATAAATGCTGCACTGGGAAACATGACTGAGGATGATTGGAGGTGGCACATGTACGACACTGTCAAGGGGAGTGATTGGCTAGGTGATCAGGATGCCATTCAATACATGTGTAGAGAAGCACCAAAAGCAGTAATTGAGCTTGAGAATTATGGACTTCCATTTTCTCGTACTGAAGATGGAAAAATTTATCAACGTGCATTTGGTGGTCAGAGCCTCGACTTTGGCAAGGGTGGACAGGCATATCGTTGTGCATGTGCTGCTGATCGAACAGGGCATGCTTTATTGCATACTCTCTATGGCCAGGCTATGAAGCATAACACACAGTTCTTTGTGGAATATTTTGCTTTGGATCTATTAATGAATAGTGATGGTAGCTGCCAGGGAGTGATAGCATTAAATATGGAGGACGGTACACTACATCGGTTCCGAGCTGCCTCAACAATTTTGGCTACCGGGGGTTATGGCAGAGCATATTTCTCTGCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCCATGGTTGCACGAGCCGGGATTCCACTTGAGGATTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTGAAGGATCTCGTGGTGAAGGTGGCATTCTTAGGAACAGCGAAGGTGAGCGCTTTATGGAACGATATGCCCCAACAGCAAAGGATCTTGCATCAAGGGATGTTGTCTCAAGATCCATGACTATGGAAATTCGGGAGGGCCGTGGTGTAGGACCACTGAAGGACCACATCTATCTGCATTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTTCCGGGTATCTCAGAAACTGCTGCCATTTTTGCTGGCGTTGATGTTACCAAAGAACCCATTCCAGTCTTACCCACAGTGCACTATAATATGGGTGGAATTCCCACGAATCATTATGGAGAGGTAGTTACAATCAAGGGAAATGATCCAGATGCCGTTATTCCAGGATTGATGGCTGCTGGGGAGGCAGCTTGTGCCTCGGTTCATGGTGCCAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCCAATAGGGTAGCAGAGATCAGTAGACCAGGCAAGTTTGTTTGGGCACAGCAAAAGCCGTTGGAAAAAGATGCTGGTGAGAAGACTATTGCATGGCTAGACAAATTGAGAAACTCAAATGGTTCACTGCCAACCTCAAAGATTCGGTTGAACATGCAACGAGTTATGCAAAACAATGCTGCTGTTTTCCGAACAGAGGAGACCTTGGAAGAAGGTTGCAAATTAATTGACAAGGCCTGGGAGAGTTTCCATGATGTGAAGGTCAAAGACAGGGACTTAATATGGAACACTGATTTGATGGAGACAATTGAATTGGAAAATCTTTTGATAAATGCATGTATTACCATGCACTCTGCTGAAGCAAGGAAAGAGAGCAGAGGAGCACATGCTCGGGAAGATTTCACAAAAAGAGATGATGAGAACTGGATGAAGCACACACTGGGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACCTGAACACATTGGATGATGAGGTCGAATCATTCCCTCCCAAGGCTCGTGTATACTGA

Coding sequence (CDS)

ATGTGGCGCTGTGTTTCTCGTGGTCTTCGCGCTTCTTCCTTCTCCAGGAAATCGTCCCCCAATGATCACCTCAGATCTCAATTTTCTAGATTCTTCTCCGTCGATTCGACAGCAGGTCGCTCCTCATACACTGTGGTTGATCACACATACGATGCGGTTGTGGTAGGCGCGGGTGGTGCAGGGCTTCGAGCTGCTATAGGATTGTCAGAGCATGGATTTAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCTCACACGGTTGCAGCTCAGGGAGGTATAAATGCTGCACTGGGAAACATGACTGAGGATGATTGGAGGTGGCACATGTACGACACTGTCAAGGGGAGTGATTGGCTAGGTGATCAGGATGCCATTCAATACATGTGTAGAGAAGCACCAAAAGCAGTAATTGAGCTTGAGAATTATGGACTTCCATTTTCTCGTACTGAAGATGGAAAAATTTATCAACGTGCATTTGGTGGTCAGAGCCTCGACTTTGGCAAGGGTGGACAGGCATATCGTTGTGCATGTGCTGCTGATCGAACAGGGCATGCTTTATTGCATACTCTCTATGGCCAGGCTATGAAGCATAACACACAGTTCTTTGTGGAATATTTTGCTTTGGATCTATTAATGAATAGTGATGGTAGCTGCCAGGGAGTGATAGCATTAAATATGGAGGACGGTACACTACATCGGTTCCGAGCTGCCTCAACAATTTTGGCTACCGGGGGTTATGGCAGAGCATATTTCTCTGCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCCATGGTTGCACGAGCCGGGATTCCACTTGAGGATTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTGAAGGATCTCGTGGTGAAGGTGGCATTCTTAGGAACAGCGAAGGTGAGCGCTTTATGGAACGATATGCCCCAACAGCAAAGGATCTTGCATCAAGGGATGTTGTCTCAAGATCCATGACTATGGAAATTCGGGAGGGCCGTGGTGTAGGACCACTGAAGGACCACATCTATCTGCATTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTTCCGGGTATCTCAGAAACTGCTGCCATTTTTGCTGGCGTTGATGTTACCAAAGAACCCATTCCAGTCTTACCCACAGTGCACTATAATATGGGTGGAATTCCCACGAATCATTATGGAGAGGTAGTTACAATCAAGGGAAATGATCCAGATGCCGTTATTCCAGGATTGATGGCTGCTGGGGAGGCAGCTTGTGCCTCGGTTCATGGTGCCAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCCAATAGGGTAGCAGAGATCAGTAGACCAGGCAAGTTTGTTTGGGCACAGCAAAAGCCGTTGGAAAAAGATGCTGGTGAGAAGACTATTGCATGGCTAGACAAATTGAGAAACTCAAATGGTTCACTGCCAACCTCAAAGATTCGGTTGAACATGCAACGAGTTATGCAAAACAATGCTGCTGTTTTCCGAACAGAGGAGACCTTGGAAGAAGGTTGCAAATTAATTGACAAGGCCTGGGAGAGTTTCCATGATGTGAAGGTCAAAGACAGGGACTTAATATGGAACACTGATTTGATGGAGACAATTGAATTGGAAAATCTTTTGATAAATGCATGTATTACCATGCACTCTGCTGAAGCAAGGAAAGAGAGCAGAGGAGCACATGCTCGGGAAGATTTCACAAAAAGAGATGATGAGAACTGGATGAAGCACACACTGGGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACCTGAACACATTGGATGATGAGGTCGAATCATTCCCTCCCAAGGCTCGTGTATACTGA

Protein sequence

MWRCVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWESFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY

Homology

[Close]

BLAST of HG10001959 vs. NCBI nr
Match: XP_038899106.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 619/639 (96.87%), Postives = 630/639 (98.59%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLM+SDGSCQGVIALNMEDGTLHRF+AA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMDSDGSCQGVIALNMEDGTLHRFQAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGR YFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRTYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           AV+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A QKPLE
Sbjct: 421 AVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----ATQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRNSNGSLPTS+IRLNMQR+MQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNSNGSLPTSEIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           FHDVKVKDR LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FHDVKVKDRSLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDEVE+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEVETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. NCBI nr
Match: XP_011653136.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucumis sativus] >KGN53253.1 hypothetical protein Csa_014908 [Cucumis sativus])

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 618/639 (96.71%), Postives = 629/639 (98.44%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFSRKSSPNDHLRSQFSRFFS DSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+MNSDGSCQGVIALNMEDGTLHRFRAA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFA VDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFADVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           A+IPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    AQQKPLE
Sbjct: 421 AIIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----AQQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRNSNGSL TSKIRLNMQRVMQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNSNGSLATSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           F DV+VKDR+LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FRDVRVKDRNLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDE+E+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEIETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. NCBI nr
Match: XP_008453738.1 (PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucumis melo] >KAA0044748.1 succinate dehydrogenase (ubiquinone) flavoprotein subunit 1 [Cucumis melo var. makuwa] >TYK16714.1 succinate dehydrogenase (ubiquinone) flavoprotein subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 618/639 (96.71%), Postives = 629/639 (98.44%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFS KS PNDHLRSQFSRFFS DSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSTKSPPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTE GKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTETGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A+QKPLE
Sbjct: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----AKQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRN+NGSLPTSKIRLNMQR+MQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           FHDV+VKDR+LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDEVE+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEVETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. NCBI nr
Match: XP_022136565.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Momordica charantia])

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 616/638 (96.55%), Postives = 626/638 (98.12%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60
           MWRCVSR   +SSFSRKSSPNDHLRS  SRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA
Sbjct: 1   MWRCVSR--VSSSFSRKSSPNDHLRSHISRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60

Query: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120
           GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW
Sbjct: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120

Query: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180
           LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180

Query: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240
           ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240

Query: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGS 300
           TILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEGS 300

Query: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360
           RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL
Sbjct: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360

Query: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPDA 420
           PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGG+PTNH+GEVVTIKGNDPDA
Sbjct: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGVPTNHHGEVVTIKGNDPDA 420

Query: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLEK 480
           V+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A QKPLEK
Sbjct: 421 VVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----ASQKPLEK 480

Query: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWESF 540
           DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQ NAAVFRT+ETLEEGCKLIDKAWESF
Sbjct: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQTNAAVFRTQETLEEGCKLIDKAWESF 540

Query: 541 HDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600
           HDVKVKDR+LIWN+DL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM
Sbjct: 541 HDVKVKDRNLIWNSDLVETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600

Query: 601 KHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           KHTLGFWENEKVRLDYRPVH+NTLDDEVESFPPKARVY
Sbjct: 601 KHTLGFWENEKVRLDYRPVHMNTLDDEVESFPPKARVY 632

[Close]

BLAST of HG10001959 vs. NCBI nr
Match: XP_022929290.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucurbita moschata] >KAG6577252.1 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 610/640 (95.31%), Postives = 624/640 (97.50%), Query Frame = 0


Query: 1   MWRCVSRGLRA--SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAG 60
           MWRCVSRGLRA  SSFSRKSSPNDHLRS FSRFFS DSTAGRSSYTVVDHTYDAVVVGAG
Sbjct: 1   MWRCVSRGLRASSSSFSRKSSPNDHLRSHFSRFFS-DSTAGRSSYTVVDHTYDAVVVGAG 60

Query: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120
           GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS
Sbjct: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120

Query: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCA 180
           DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCA
Sbjct: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCA 180

Query: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRA 240
           CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALN EDGTLHRF+A
Sbjct: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNTEDGTLHRFQA 240

Query: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITE 300
           ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITE
Sbjct: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITE 300

Query: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360
           GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN
Sbjct: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360

Query: 361 HLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDP 420
           HLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDP
Sbjct: 361 HLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDP 420

Query: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPL 480
           DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIS+PG    A+QKPL
Sbjct: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPG----AKQKPL 480

Query: 481 EKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWE 540
           E DAGEKTIAWLDKLRN+NGSLPTS IRLNMQR+MQNNAAVFRT+ETLEEGCKLIDK WE
Sbjct: 481 ENDAGEKTIAWLDKLRNANGSLPTSNIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKTWE 540

Query: 541 SFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEN 600
           SFHDVKVKDR LIWNTDL+ETIELENLLINA ITMHSAEARKESRGAHAREDFT RDDEN
Sbjct: 541 SFHDVKVKDRSLIWNTDLIETIELENLLINASITMHSAEARKESRGAHAREDFTTRDDEN 600

Query: 601 WMKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           WMKHTLGFWENEKVRLDYRPVH+NTLDDE+E+ PPKARVY
Sbjct: 601 WMKHTLGFWENEKVRLDYRPVHMNTLDDEMETIPPKARVY 635

[Close]

BLAST of HG10001959 vs. ExPASy Swiss-Prot
Match: O82663 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1)

HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 575/638 (90.13%), Postives = 609/638 (95.45%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60
           MWRCVSRG RA +    S  +    S+FSRFFS  ST  RSSYT+VDHTYDAVVVGAGGA
Sbjct: 1   MWRCVSRGFRAPASKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA 60

Query: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120
           GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDW
Sbjct: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDW 120

Query: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180
           LGDQDAIQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 180

Query: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240
           ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLM SDGSCQGVIALNMEDGTLHRFR++ 
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSSQ 240

Query: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGS 300
           TILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+DLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 300

Query: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360
           RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGP KDHIYLHLNHL
Sbjct: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHL 360

Query: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPDA 420
           PP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVTIKG+DPDA
Sbjct: 361 PPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDA 420

Query: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLEK 480
           VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIS+PG+    +QKPLEK
Sbjct: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGE----KQKPLEK 480

Query: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWESF 540
           DAGEKTIAWLD+LRNSNGSLPTS IRLNMQR+MQNNAAVFRT+ETLEEGC+LIDKAWESF
Sbjct: 481 DAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESF 540

Query: 541 HDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600
            DV+VKDR +IWN+DL+ET+ELENLLINA ITMHSAEARKESRGAHAREDFTKR+D  WM
Sbjct: 541 GDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWM 600

Query: 601 KHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           KHTLG+WE+EKVRLDYRPVH++TLDDE+++FPPKARVY
Sbjct: 601 KHTLGYWEDEKVRLDYRPVHMDTLDDEIDTFPPKARVY 634

[Close]

BLAST of HG10001959 vs. ExPASy Swiss-Prot
Match: Q6ZDY8 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH1 PE=1 SV=1)

HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 571/639 (89.36%), Postives = 608/639 (95.15%), Query Frame = 0


Query: 1   MWR-CVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWR CVSRGLR+ S  + SS +  + S  +R FS  S    SSYTVVDH+YDAVVVGAGG
Sbjct: 1   MWRGCVSRGLRSLSKGKGSSSSAPV-SAAARLFSTAS----SSYTVVDHSYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQD+IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDSIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHA+LHTLYGQAMKHNTQFFVEYFALDL+M+S+G+CQGVIALNMEDGTLHRFRA 
Sbjct: 181 AADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTCQGVIALNMEDGTLHRFRAT 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           +TILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+DLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 NTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVT+KG++PD
Sbjct: 361 LPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTMKGDNPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           +V+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAE ++PG+    +QKPL+
Sbjct: 421 SVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAETAKPGE----KQKPLQ 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           K AGEKTIAWLDKLRN+NGSLPTSKIRLNMQRVMQNNAAVFRT+ETLEEGCKLI KAWES
Sbjct: 481 KSAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLITKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           +HDVK+ DR LIWN+DL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDE W
Sbjct: 541 YHDVKISDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEQW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKH+LG+WENEKVRL YRPVH+NTLD EVESFPPKARVY
Sbjct: 601 MKHSLGYWENEKVRLAYRPVHMNTLDSEVESFPPKARVY 630

[Close]

BLAST of HG10001959 vs. ExPASy Swiss-Prot
Match: Q9ZPX5 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-2 PE=1 SV=1)

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 551/640 (86.09%), Postives = 600/640 (93.75%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPND-HLRSQFSRFFSVDSTAG-RSSYTVVDHTYDAVVVGAG 60
           MWRC    LR +S SR+S  N   + SQ SRFFS   +AG +SSYT+VDHTYDAVVVGAG
Sbjct: 1   MWRC----LRVASSSRRSESNGAFITSQLSRFFSAPPSAGDKSSYTIVDHTYDAVVVGAG 60

Query: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120
           GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+ DDWRWHMYDTVKGS
Sbjct: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDWRWHMYDTVKGS 120

Query: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCA 180
           DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSL+FG GGQAYRCA
Sbjct: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLEFGIGGQAYRCA 180

Query: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRA 240
           CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+MNSDG+CQGVIALNMEDGTLHRF A
Sbjct: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFHA 240

Query: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITE 300
            STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+DLEFVQFHPTGIYGAGCLITE
Sbjct: 241 GSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITE 300

Query: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360
           G+RGEGGILRNSEGE+FM+RYAPTA+DLASRDVVSRSMTMEIR+GRG GP+KD++YL+LN
Sbjct: 301 GARGEGGILRNSEGEKFMDRYAPTARDLASRDVVSRSMTMEIRQGRGAGPMKDYLYLYLN 360

Query: 361 HLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDP 420
           HLPP+VLKERLPGISETAAIFAGVDVT+EPIPVLPTVHYNMGGIPTN++GEV+T++G+DP
Sbjct: 361 HLPPEVLKERLPGISETAAIFAGVDVTREPIPVLPTVHYNMGGIPTNYHGEVITLRGDDP 420

Query: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPL 480
           DAV+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI +PG+    + KPL
Sbjct: 421 DAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGE----KLKPL 480

Query: 481 EKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWE 540
           EKDAGEK+I WLD++RNSNGSLPTSKIRLNMQRVMQNNAAVFRT+ETLEEGC LIDK W+
Sbjct: 481 EKDAGEKSIEWLDRIRNSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCDLIDKTWD 540

Query: 541 SFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEN 600
           SF DVKV DR +IWN+DL+ET+ELENLL+NACITMHSAEARKESRGAHAREDFTKRDD N
Sbjct: 541 SFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDAN 600

Query: 601 WMKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           WMKHTLG+WE   V+L+YRPVH+ TLDDEV++FPPK RVY
Sbjct: 601 WMKHTLGYWEEGNVKLEYRPVHMKTLDDEVDTFPPKPRVY 632

[Close]

BLAST of HG10001959 vs. ExPASy Swiss-Prot
Match: Q9UTJ7 (Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sdh1 PE=2 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 7.1e-254
Identity = 433/607 (71.33%), Postives = 504/607 (83.03%), Query Frame = 0


Query: 36  STAGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGI 95
           ST+    Y V+DHTYDA+VVGAGGAGLRA  GL+E GFNTACITKLFPTRSHTVAAQGGI
Sbjct: 41  STSESVKYPVIDHTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGI 100

Query: 96  NAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGK 155
           NAALGNMT+DDWRWH YDTVKGSDWLGDQDAI YM +EAPKAV+ELE++G+PFSRT++GK
Sbjct: 101 NAALGNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGK 160

Query: 156 IYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMN 215
           IYQRAFGGQSL++GKGGQAYRCA  ADRTGH++LHTLYGQ++KHNT FF+EYFA+DL+M 
Sbjct: 161 IYQRAFGGQSLEYGKGGQAYRCAAVADRTGHSILHTLYGQSLKHNTNFFIEYFAMDLIME 220

Query: 216 SDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIP 275
             G C+GVIA+N+EDG++HRFRA  TILATGGYGRAYFS TSAHTCTGDGNAMV+RAG+P
Sbjct: 221 G-GECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLP 280

Query: 276 LEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRS 335
           L+DLEFVQFHPTGIYGAGCLITEG RGEGG L NS+GERFMERYAPTAKDLASRDVVSR+
Sbjct: 281 LQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRA 340

Query: 336 MTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTV 395
           MT+EIREGRGVGP KDH YL L+HLP ++LKERLPGISETAAIFAGVDVTKEPIPVLPTV
Sbjct: 341 MTVEIREGRGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTV 400

Query: 396 HYNMGGIPTNHYGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGR 455
           HYNMGGIPT   GEV+TI  N  D ++PGL AAGEAAC SVHG NRLGANSLLDIVVFGR
Sbjct: 401 HYNMGGIPTRFTGEVLTIDENGKDKIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGR 460

Query: 456 ACANRVAEISRPGKFVWAQQKPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQN 515
           ACA  + +   P        KPL  DAG  ++ +LD++R S G   TS+IRL+MQ+ MQ 
Sbjct: 461 ACALHIKDTLEPN----TPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQR 520

Query: 516 NAAVFRTEETLEEGCKLIDKAWESFHDVKVKDRDLIWNTDLMETIELENLLINACITMHS 575
           + +VFR EETL+EG K I +   ++ D+ ++DR LIWNTDL+E +EL NLL  A  T ++
Sbjct: 521 DVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANA 580

Query: 576 AEARKESRGAHAREDFTKRDDENWMKHTLGFWEN---EKVRLDYRPVHLNTLDD-EVESF 635
           A  RKESRGAHARED+ +RDD+NW+KHTL  W++   + V L YR V   T+D+ EV+  
Sbjct: 581 ALNRKESRGAHAREDYPERDDKNWIKHTL-TWQHKTGDPVTLKYRAVTRTTMDENEVKPV 640

Query: 636 PPKARVY 639
           PP  RVY
Sbjct: 641 PPFKRVY 641

[Close]

BLAST of HG10001959 vs. ExPASy Swiss-Prot
Match: Q7ZVF3 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Danio rerio OX=7955 GN=sdha PE=2 SV=2)

HSP 1 Score: 869.0 bits (2244), Expect = 3.3e-251
Identity = 433/618 (70.06%), Postives = 507/618 (82.04%), Query Frame = 0


Query: 41  SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALG 100
           + Y VVDH +DAVVVGAGGAGLRAA GLSE GFNTAC+TKLFPTRSHTVAAQGGINAALG
Sbjct: 50  NQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALG 109

Query: 101 NMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRA 160
           NM +DDWRWH YDTVKGSDWLGDQDAI YM  +AP AV+ELEN+G+PFSRT+DGKIYQRA
Sbjct: 110 NMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRA 169

Query: 161 FGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSC 220
           FGGQSL FGKGGQA+RC C ADRTGH+LLHTLYG++++++T +FVEYFALDLLM  DG C
Sbjct: 170 FGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-EDGEC 229

Query: 221 QGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLE 280
           +GVIAL MEDG++HRFRA +T++ATGGYGR +FS TSAHT TGDGNAMV RAG+P +DLE
Sbjct: 230 KGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLE 289

Query: 281 FVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEI 340
           FVQFHPTGIYGAGCLITEG RGEGGIL NSEGERFMERYAP AKDLASRDVVSRSMT+EI
Sbjct: 290 FVQFHPTGIYGAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEI 349

Query: 341 REGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMG 400
           REGRGVGP KDH++L L+HLPP  L  RLPGISETA IFAGVDVTKEPIPVLPTVHYNMG
Sbjct: 350 REGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMG 409

Query: 401 GIPTNHYGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANR 460
           GIPTN+ G+V+T K +  D V+PGL A GEA CASVHGANRLGANSLLD+VVFGRACA  
Sbjct: 410 GIPTNYKGQVITYK-DGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALT 469

Query: 461 VAEISRPGKFVWAQQKPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVF 520
           +AEI  PG+    +  PL+ +AGE ++A LDK+R +NGS  TS+IRLNMQ+ MQ++AAVF
Sbjct: 470 IAEIDTPGE----KLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVF 529

Query: 521 RTEETLEEGCKLIDKAWESFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARK 580
           RT + L+EGC  ++  ++S  D+K  DR ++WNTDL+ET+EL+NL++NA  T+ SAEARK
Sbjct: 530 RTGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARK 589

Query: 581 ESRGAHAREDFTKRDDE-----------------NWMKHTLGFWENE--KVRLDYRPVHL 639
           ESRGAHAREDF  R DE                 +W KHTL + + E  KV L+YRPV  
Sbjct: 590 ESRGAHAREDFKDRVDEYDYSKPLQGQVKKPFEQHWRKHTLSYVDPETGKVTLEYRPVID 649

[Close]

BLAST of HG10001959 vs. ExPASy TrEMBL
Match: A0A5D3D0G2 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005490 PE=3 SV=1)

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 618/639 (96.71%), Postives = 629/639 (98.44%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFS KS PNDHLRSQFSRFFS DSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSTKSPPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTE GKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTETGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A+QKPLE
Sbjct: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----AKQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRN+NGSLPTSKIRLNMQR+MQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           FHDV+VKDR+LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDEVE+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEVETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. ExPASy TrEMBL
Match: A0A0A0KUM6 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_4G038700 PE=3 SV=1)

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 618/639 (96.71%), Postives = 629/639 (98.44%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFSRKSSPNDHLRSQFSRFFS DSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+MNSDGSCQGVIALNMEDGTLHRFRAA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFA VDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFADVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           A+IPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    AQQKPLE
Sbjct: 421 AIIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----AQQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRNSNGSL TSKIRLNMQRVMQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNSNGSLATSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           F DV+VKDR+LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FRDVRVKDRNLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDE+E+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEIETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. ExPASy TrEMBL
Match: A0A1S3BY61 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494381 PE=3 SV=1)

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 618/639 (96.71%), Postives = 629/639 (98.44%), Query Frame = 0


Query: 1   MWRCVSRGLRA-SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGG 60
           MWRCVSRGLRA SSFS KS PNDHLRSQFSRFFS DSTAGRSSYTVVDHTYDAVVVGAGG
Sbjct: 1   MWRCVSRGLRASSSFSTKSPPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120
           AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSD 120

Query: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCAC 180
           WLGDQDAIQYMCREAPKAVIELENYGLPFSRTE GKIYQRAFGGQSLDFGKGGQAYRCAC
Sbjct: 121 WLGDQDAIQYMCREAPKAVIELENYGLPFSRTETGKIYQRAFGGQSLDFGKGGQAYRCAC 180

Query: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240
           AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA
Sbjct: 181 AADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAA 240

Query: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEG 300
           STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEG
Sbjct: 241 STILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEG 300

Query: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360
           SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH
Sbjct: 301 SRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNH 360

Query: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPD 420
           LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDPD
Sbjct: 361 LPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPD 420

Query: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLE 480
           AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A+QKPLE
Sbjct: 421 AVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----AKQKPLE 480

Query: 481 KDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWES 540
           KDAGEKTIAWLDKLRN+NGSLPTSKIRLNMQR+MQNNAAVFRT+ETLEEGCKLIDKAWES
Sbjct: 481 KDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKAWES 540

Query: 541 FHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600
           FHDV+VKDR+LIWNTDL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW
Sbjct: 541 FHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENW 600

Query: 601 MKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           MKHTLGFWENEKVRLDYRPVH+NTLDDEVE+FPPKARVY
Sbjct: 601 MKHTLGFWENEKVRLDYRPVHMNTLDDEVETFPPKARVY 635

[Close]

BLAST of HG10001959 vs. ExPASy TrEMBL
Match: A0A6J1C499 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008239 PE=3 SV=1)

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 616/638 (96.55%), Postives = 626/638 (98.12%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60
           MWRCVSR   +SSFSRKSSPNDHLRS  SRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA
Sbjct: 1   MWRCVSR--VSSSFSRKSSPNDHLRSHISRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60

Query: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120
           GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW
Sbjct: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120

Query: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180
           LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180

Query: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240
           ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240

Query: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGS 300
           TILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEGS 300

Query: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360
           RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL
Sbjct: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360

Query: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPDA 420
           PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGG+PTNH+GEVVTIKGNDPDA
Sbjct: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGVPTNHHGEVVTIKGNDPDA 420

Query: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLEK 480
           V+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI RPG    A QKPLEK
Sbjct: 421 VVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIGRPG----ASQKPLEK 480

Query: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWESF 540
           DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQ NAAVFRT+ETLEEGCKLIDKAWESF
Sbjct: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQTNAAVFRTQETLEEGCKLIDKAWESF 540

Query: 541 HDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600
           HDVKVKDR+LIWN+DL+ETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM
Sbjct: 541 HDVKVKDRNLIWNSDLVETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600

Query: 601 KHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           KHTLGFWENEKVRLDYRPVH+NTLDDEVESFPPKARVY
Sbjct: 601 KHTLGFWENEKVRLDYRPVHMNTLDDEVESFPPKARVY 632

[Close]

BLAST of HG10001959 vs. ExPASy TrEMBL
Match: A0A6J1EU03 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435915 PE=3 SV=1)

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 610/640 (95.31%), Postives = 624/640 (97.50%), Query Frame = 0


Query: 1   MWRCVSRGLRA--SSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAG 60
           MWRCVSRGLRA  SSFSRKSSPNDHLRS FSRFFS DSTAGRSSYTVVDHTYDAVVVGAG
Sbjct: 1   MWRCVSRGLRASSSSFSRKSSPNDHLRSHFSRFFS-DSTAGRSSYTVVDHTYDAVVVGAG 60

Query: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120
           GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS
Sbjct: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120

Query: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCA 180
           DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCA
Sbjct: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCA 180

Query: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRA 240
           CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALN EDGTLHRF+A
Sbjct: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNTEDGTLHRFQA 240

Query: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITE 300
           ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYGAGCLITE
Sbjct: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITE 300

Query: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360
           GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN
Sbjct: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360

Query: 361 HLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDP 420
           HLPP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVVTIKGNDP
Sbjct: 361 HLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDP 420

Query: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPL 480
           DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIS+PG    A+QKPL
Sbjct: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPG----AKQKPL 480

Query: 481 EKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWE 540
           E DAGEKTIAWLDKLRN+NGSLPTS IRLNMQR+MQNNAAVFRT+ETLEEGCKLIDK WE
Sbjct: 481 ENDAGEKTIAWLDKLRNANGSLPTSNIRLNMQRIMQNNAAVFRTQETLEEGCKLIDKTWE 540

Query: 541 SFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEN 600
           SFHDVKVKDR LIWNTDL+ETIELENLLINA ITMHSAEARKESRGAHAREDFT RDDEN
Sbjct: 541 SFHDVKVKDRSLIWNTDLIETIELENLLINASITMHSAEARKESRGAHAREDFTTRDDEN 600

Query: 601 WMKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           WMKHTLGFWENEKVRLDYRPVH+NTLDDE+E+ PPKARVY
Sbjct: 601 WMKHTLGFWENEKVRLDYRPVHMNTLDDEMETIPPKARVY 635

[Close]

BLAST of HG10001959 vs. TAIR 10
Match: AT5G66760.1 (succinate dehydrogenase 1-1 )

HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 575/638 (90.13%), Postives = 609/638 (95.45%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGA 60
           MWRCVSRG RA +    S  +    S+FSRFFS  ST  RSSYT+VDHTYDAVVVGAGGA
Sbjct: 1   MWRCVSRGFRAPASKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA 60

Query: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 120
           GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDW
Sbjct: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDW 120

Query: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACA 180
           LGDQDAIQYMCREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 180

Query: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAAS 240
           ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLM SDGSCQGVIALNMEDGTLHRFR++ 
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSSQ 240

Query: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGS 300
           TILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+DLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 300

Query: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHL 360
           RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGP KDHIYLHLNHL
Sbjct: 301 RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHL 360

Query: 361 PPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDPDA 420
           PP+VLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN++GEVVTIKG+DPDA
Sbjct: 361 PPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDA 420

Query: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPLEK 480
           VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIS+PG+    +QKPLEK
Sbjct: 421 VIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGE----KQKPLEK 480

Query: 481 DAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWESF 540
           DAGEKTIAWLD+LRNSNGSLPTS IRLNMQR+MQNNAAVFRT+ETLEEGC+LIDKAWESF
Sbjct: 481 DAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESF 540

Query: 541 HDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 600
            DV+VKDR +IWN+DL+ET+ELENLLINA ITMHSAEARKESRGAHAREDFTKR+D  WM
Sbjct: 541 GDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWM 600

Query: 601 KHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           KHTLG+WE+EKVRLDYRPVH++TLDDE+++FPPKARVY
Sbjct: 601 KHTLGYWEDEKVRLDYRPVHMDTLDDEIDTFPPKARVY 634

[Close]

BLAST of HG10001959 vs. TAIR 10
Match: AT2G18450.1 (succinate dehydrogenase 1-2 )

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 551/640 (86.09%), Postives = 600/640 (93.75%), Query Frame = 0


Query: 1   MWRCVSRGLRASSFSRKSSPND-HLRSQFSRFFSVDSTAG-RSSYTVVDHTYDAVVVGAG 60
           MWRC    LR +S SR+S  N   + SQ SRFFS   +AG +SSYT+VDHTYDAVVVGAG
Sbjct: 1   MWRC----LRVASSSRRSESNGAFITSQLSRFFSAPPSAGDKSSYTIVDHTYDAVVVGAG 60

Query: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGS 120
           GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+ DDWRWHMYDTVKGS
Sbjct: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDWRWHMYDTVKGS 120

Query: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCA 180
           DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSL+FG GGQAYRCA
Sbjct: 121 DWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLEFGIGGQAYRCA 180

Query: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRA 240
           CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+MNSDG+CQGVIALNMEDGTLHRF A
Sbjct: 181 CAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFHA 240

Query: 241 ASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITE 300
            STILATGGYGRAYFSATSAHTCTGDGNAMVARAG+PL+DLEFVQFHPTGIYGAGCLITE
Sbjct: 241 GSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITE 300

Query: 301 GSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLN 360
           G+RGEGGILRNSEGE+FM+RYAPTA+DLASRDVVSRSMTMEIR+GRG GP+KD++YL+LN
Sbjct: 301 GARGEGGILRNSEGEKFMDRYAPTARDLASRDVVSRSMTMEIRQGRGAGPMKDYLYLYLN 360

Query: 361 HLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGNDP 420
           HLPP+VLKERLPGISETAAIFAGVDVT+EPIPVLPTVHYNMGGIPTN++GEV+T++G+DP
Sbjct: 361 HLPPEVLKERLPGISETAAIFAGVDVTREPIPVLPTVHYNMGGIPTNYHGEVITLRGDDP 420

Query: 421 DAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKFVWAQQKPL 480
           DAV+PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEI +PG+    + KPL
Sbjct: 421 DAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGE----KLKPL 480

Query: 481 EKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTEETLEEGCKLIDKAWE 540
           EKDAGEK+I WLD++RNSNGSLPTSKIRLNMQRVMQNNAAVFRT+ETLEEGC LIDK W+
Sbjct: 481 EKDAGEKSIEWLDRIRNSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCDLIDKTWD 540

Query: 541 SFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEN 600
           SF DVKV DR +IWN+DL+ET+ELENLL+NACITMHSAEARKESRGAHAREDFTKRDD N
Sbjct: 541 SFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDAN 600

Query: 601 WMKHTLGFWENEKVRLDYRPVHLNTLDDEVESFPPKARVY 639
           WMKHTLG+WE   V+L+YRPVH+ TLDDEV++FPPK RVY
Sbjct: 601 WMKHTLGYWEEGNVKLEYRPVHMKTLDDEVDTFPPKPRVY 632

[Close]

BLAST of HG10001959 vs. TAIR 10
Match: AT5G14760.1 (L-aspartate oxidase )

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-68
Identity = 203/608 (33.39%), Postives = 297/608 (48.85%), Query Frame = 0


Query: 10  RASSFSRKSSPNDHLRSQFSRFFSVDSTAGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLS 69
           R   +SR  SP     S+ S+     S +  + Y      YD  V+G+G AGLR A+ ++
Sbjct: 55  RCGCYSRGISP----ISETSKPIRAVSVSSSTKY------YDFTVIGSGVAGLRYALEVA 114

Query: 70  EHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQY 129
           + G   A ITK  P  S+T  AQGG++A L  +  D    HM DT+     L D++ ++ 
Sbjct: 115 KQG-TVAVITKDEPHESNTNYAQGGVSAVLCPL--DSVESHMRDTMVAGAHLCDEETVRV 174

Query: 130 MCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALL 189
           +C E P+ + EL   G  F   EDG ++    GG S          R   AAD TG  + 
Sbjct: 175 VCTEGPERIRELIAMGASFDHGEDGNLHLAREGGHS--------HCRIVHAADMTGREIE 234

Query: 190 HTLYGQAMKH-NTQFFVEYFALDLLMNSDG---SCQGVIALNMEDGTLHRFRAASTILAT 249
             L    +   N   F  +FA+DLL + DG    C GV  LN++   + RF +  T+LA+
Sbjct: 235 RALLEAVLNDPNISVFKHHFAIDLLTSQDGLNTVCHGVDTLNIKTNEVVRFISKVTLLAS 294

Query: 250 GGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGC----------- 309
           GG G  Y S T+    TGDG AM  RA   + ++EFVQFHPT +   G            
Sbjct: 295 GGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKLQTARENA 354

Query: 310 -LITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHI 369
            LITE  RG+GGIL N   ERFM  Y   A +LA RDVV+RS+  ++++       + ++
Sbjct: 355 FLITEAVRGDGGILYNLGMERFMPVYDERA-ELAPRDVVARSIDDQLKKRN-----EKYV 414

Query: 370 YLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTI 429
            L ++H P + +    P I+ +  +  G+D+T++PIPV+P  HY  GG+     GE   +
Sbjct: 415 LLDISHKPREKILAHFPNIA-SECLKHGLDITRQPIPVVPAAHYMCGGVRAGLQGETNVL 474

Query: 430 KGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISRPGKF-VW 489
                     GL  AGE AC  +HGANRL +NSLL+ +VF R       E+ +  +  V 
Sbjct: 475 ----------GLFVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSTELMKRTRLDVC 534

Query: 490 AQQK---PLEKDA---GEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQNNAAVFRTE--- 549
           A +K   P+   A   G++ IA +  L        T ++R  +Q VM     + R+    
Sbjct: 535 ASEKWTRPVVATARLLGDEVIAKIIAL--------TKEVRRELQEVMWKYVGIVRSTIRL 594

Query: 550 ETLEEGCKLIDKAWESFHDVKVKDRDLIWNTDLMETIELENLLINACITMHSAEARKESR 592
            T E     ++  WE+F      ++ ++     +E  E+ NL   A + + SA AR ESR
Sbjct: 595 TTAERKIAELEAKWETFLFEHGWEQTVV----ALEACEMRNLFCCAKLVVSSALARHESR 612

The following BLAST results are available for this feature:

BLAST of HG10001959 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899106.1	0.0e+00	96.87	succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Beni...	[more]
XP_011653136.1	0.0e+00	96.71	succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucu...	[more]
XP_008453738.1	0.0e+00	96.71	PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochon...	[more]
XP_022136565.1	0.0e+00	96.55	succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Momord...	[more]
XP_022929290.1	0.0e+00	95.31	succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucu...	[more]

BLAST of HG10001959 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82663	0.0e+00	90.13	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Ar...	[more]
Q6ZDY8	0.0e+00	89.36	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryz...	[more]
Q9ZPX5	0.0e+00	86.09	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Ar...	[more]
Q9UTJ7	7.1e-254	71.33	Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondria...	[more]
Q7ZVF3	3.3e-251	70.06	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dani...	[more]

BLAST of HG10001959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0G2	0.0e+00	96.71	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]
A0A0A0KUM6	0.0e+00	96.71	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]
A0A1S3BY61	0.0e+00	96.71	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]
A0A6J1C499	0.0e+00	96.55	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Momo...	[more]
A0A6J1EU03	0.0e+00	95.31	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]

BLAST of HG10001959 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66760.1	0.0e+00	90.13	succinate dehydrogenase 1-1	[more]
AT2G18450.1	0.0e+00	86.09	succinate dehydrogenase 1-2	[more]
AT5G14760.1	1.5e-68	33.39	L-aspartate oxidase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011281	Succinate dehydrogenase, flavoprotein subunit	TIGRFAM	TIGR01816	TIGR01816	coord: 48..638 e-value: 3.6E-293 score: 971.0
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 51..458 e-value: 9.1E-173 score: 576.6
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 42..470
None	No IPR available	GENE3D	1.20.58.100		coord: 478..588 e-value: 2.6E-35 score: 123.1
None	No IPR available	PIRSF	PIRSF000171	SDHA_APRA_LASPO	coord: 41..627 e-value: 4.5E-43 score: 145.2
None	No IPR available	GENE3D	4.10.80.40	succinate dehydrogenase protein domain	coord: 589..638 e-value: 1.6E-18 score: 68.1
None	No IPR available	PANTHER	PTHR11632:SF79	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 2..638
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	GENE3D	3.90.700.10	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	coord: 289..392 e-value: 9.1E-173 score: 576.6
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	SUPERFAMILY	56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	coord: 279..397
IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	PFAM	PF02910	Succ_DH_flav_C	coord: 506..638 e-value: 7.2E-45 score: 152.1
IPR003953	FAD-dependent oxidoreductase 2, FAD binding domain	PFAM	PF00890	FAD_binding_2	coord: 51..447 e-value: 3.6E-123 score: 411.7
IPR014006	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	TIGRFAM	TIGR01812	TIGR01812	coord: 51..638 e-value: 2.6E-241 score: 800.0
IPR030664	FAD-dependent oxidoreductase SdhA/FrdA/AprA	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 2..638
IPR003952	Fumarate reductase/succinate dehydrogenase, FAD-binding site	PROSITE	PS00504	FRD_SDH_FAD_BINDING	coord: 85..94
IPR037099	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily	SUPERFAMILY	46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	coord: 497..638

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001959.1	HG10001959.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors