HG10001939 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001939
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B
Location	Chr11: 1919983 .. 1922407 (+)
RNA-Seq Expression	HG10001939
Synteny	HG10001939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCCAGAAAGTTCCTCTTTTGTATCTTGCTAATGACATCTTACAAAATAGCAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAAAGGTGACAACCATGGAAAGAATGTAATTTCCAGATTGGTAAGTTTGAGTTATTTTCTTTCCTCTTCTTGGATGAGTGGTCTGACCCTCATGCATGTTGTTAGATTTTCCTACAAAATTTGTTGGTGAGTAATGATAAATATTGAAGATGCAATTAATGGAATTTATCAGGAGAGCTTCTCTTTTTTATCGAGTGTCTGAGATTGTTGTATGTAATGTCTACTAAAAATGAAGAAACTGCGGATTTCTTGAGCAGGAAAATTGTTTAAAAAGTACTTCCAGGATCTTATTTTATGACTTTTATGCATTTCTTCCTTCCTTTGAATATGTCAATCAAATTGTGCTTGCACATTCTTAGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGAACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCAATTAGAACGGTGAGTTACTATTTTATCTTCTGCTTCTTTTTCCATTTTTCTTTCTTCTGTTGGCACCAGAAGTTATGCAAGACTTTGTTTTTATACTCCATGACTGTTCCCCTTTAATTTTCTTAGTATCAATATTATTTCTTTTACCTCACAATGCTTTTGTAGTTGAGTTGACATTATATCCTTAATTTGGTCGCAGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATTGTATCAGCATTCCACCTGGTCCTAAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTAATTCTGCAGTTCAACGTGTAAGGAAGATGGAAAATGACGTTGATTTTGCCTGTTCCATGGGTATGGCAACAATGCTTTAATGTAAATATCTGCATCGTCTAAAATGTTTTTCATTGTGCATCTAATTTGTTTTGAAAGGAACCCAAATTTGTACTTTTAGTTTAAATTTTTTAGTATCCCATCTTTCAATTGCCAAATTATACAGTCTCTGAGTTTCTATCACTATCCACCAGCAAAGAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTATTTTGAAACAGTGTATTGAGAAACTACAATCGGTTGAAGCCAGTCGGATGGCACTTATCTCTCAGTTAAAAGAAGCTCTGCATGTTCAGGTATCTTGATCAATCATTTCTCATTGTCCTCGGAAGTTTGAACAAATTTTGATTTCTGTATTACATTATGAACTACTGACAATTGACAAATTTGGGAAACTGGACAACTAACTGTAGGAATCAGAGCTGGAGAATATTCGAACCCATATGCAGGTATTTTCTTGAGTGAAATAGATTTGTTTTATTTGTGCTTGTACTTAACATTTATTAGAACCTCAACATGAATGTTTATAGTTTCATAATATGGAAGTGGTGAAGCTTTACCATGGATACCTATAATCCATGTGAATCTGATGGTTGCTGATGATTGAAATTTTTTGTTACCATTACTCATTTCATTTCGAACTTCAAAAACTACAGGTTGCCCAGGCTCAGGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCACCATCAATTCAAATGCAAAAGCAGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCGGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGAATACTGGTCTAACAAAGACGAATAATGGATTGAATGCATTTGCATCGAAGTCCATGCGTTCCTCTGCCAGTTCTATTACAAAACCTGAAGTGTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCCCTTCCTGCTCCCGCTAACCATTCGTATCAATCAGTTATGTTGCCCCAACCGACAATGCAGAGCCAAGCCCCAAATTCACAAACTCAGTATCAGATGCTTCCAAGTGCACCTTCCCAGCAATATTTGCAGCTCACAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCAGTGCCACCACCGCCTATGCCCCATATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCAATATCCTTAGCTCAACAACCATCACCGATGATACAAACACAACCAGTCCCTTTCACGCAGCAACCTTTAGCACCTAGTTTTCGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGGCATCCTCCCCCTTCTCAGTGA

mRNA sequence

ATGGTCCAGAAAGTTCCTCTTTTGTATCTTGCTAATGACATCTTACAAAATAGCAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAAAGGTGACAACCATGGAAAGAATGTAATTTCCAGATTGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGAACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCAATTAGAACGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATTGTATCAGCATTCCACCTGGTCCTAAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTAATTCTGCAGTTCAACGTGTAAGGAAGATGGAAAATGACGTTGATTTTGCCTGTTCCATGGCAAAGAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTATTTTGAAACAGTGTATTGAGAAACTACAATCGGTTGAAGCCAGTCGGATGGCACTTATCTCTCAGTTAAAAGAAGCTCTGCATGTTCAGGAATCAGAGCTGGAGAATATTCGAACCCATATGCAGGTTGCCCAGGCTCAGGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCACCATCAATTCAAATGCAAAAGCAGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCGGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGAATACTGGTCTAACAAAGACGAATAATGGATTGAATGCATTTGCATCGAAGTCCATGCGTTCCTCTGCCAGTTCTATTACAAAACCTGAAGTGTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCCCTTCCTGCTCCCGCTAACCATTCGTATCAATCAGTTATGTTGCCCCAACCGACAATGCAGAGCCAAGCCCCAAATTCACAAACTCAGTATCAGATGCTTCCAAGTGCACCTTCCCAGCAATATTTGCAGCTCACAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCAGTGCCACCACCGCCTATGCCCCATATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCAATATCCTTAGCTCAACAACCATCACCGATGATACAAACACAACCAGTCCCTTTCACGCAGCAACCTTTAGCACCTAGTTTTCGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGGCATCCTCCCCCTTCTCAGTGA

Coding sequence (CDS)

ATGGTCCAGAAAGTTCCTCTTTTGTATCTTGCTAATGACATCTTACAAAATAGCAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAAAGGTGACAACCATGGAAAGAATGTAATTTCCAGATTGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGAACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCAATTAGAACGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATTGTATCAGCATTCCACCTGGTCCTAAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTAATTCTGCAGTTCAACGTGTAAGGAAGATGGAAAATGACGTTGATTTTGCCTGTTCCATGGCAAAGAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTATTTTGAAACAGTGTATTGAGAAACTACAATCGGTTGAAGCCAGTCGGATGGCACTTATCTCTCAGTTAAAAGAAGCTCTGCATGTTCAGGAATCAGAGCTGGAGAATATTCGAACCCATATGCAGGTTGCCCAGGCTCAGGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCACCATCAATTCAAATGCAAAAGCAGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCGGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGAATACTGGTCTAACAAAGACGAATAATGGATTGAATGCATTTGCATCGAAGTCCATGCGTTCCTCTGCCAGTTCTATTACAAAACCTGAAGTGTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCCCTTCCTGCTCCCGCTAACCATTCGTATCAATCAGTTATGTTGCCCCAACCGACAATGCAGAGCCAAGCCCCAAATTCACAAACTCAGTATCAGATGCTTCCAAGTGCACCTTCCCAGCAATATTTGCAGCTCACAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCAGTGCCACCACCGCCTATGCCCCATATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCAATATCCTTAGCTCAACAACCATCACCGATGATACAAACACAACCAGTCCCTTTCACGCAGCAACCTTTAGCACCTAGTTTTCGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGGCATCCTCCCCCTTCTCAGTGA

Protein sequence

MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILKQCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGYLSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTMQSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ

Homology

[Close]

BLAST of HG10001939 vs. NCBI nr
Match: KAE8637566.1 (hypothetical protein CSA_017843 [Cucumis sativus])

HSP 1 Score: 835.9 bits (2158), Expect = 1.8e-238
Identity = 452/472 (95.76%), Postives = 462/472 (97.88%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 424 MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 483

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 484 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 543

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 544 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 603

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALI+QLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 604 QCIEKLQSVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 663

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           +SKTS I+SNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+T LT
Sbjct: 664 VSKTSIIDSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLT 723

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           KTNNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPL APANHSYQSVM+PQPTM
Sbjct: 724 KTNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTM 783

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT
Sbjct: 784 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 843

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 844 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 895

[Close]

BLAST of HG10001939 vs. NCBI nr
Match: XP_031745821.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucumis sativus])

HSP 1 Score: 835.9 bits (2158), Expect = 1.8e-238
Identity = 452/472 (95.76%), Postives = 462/472 (97.88%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 174 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALI+QLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           +SKTS I+SNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+T LT
Sbjct: 294 VSKTSIIDSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLT 353

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           KTNNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPL APANHSYQSVM+PQPTM
Sbjct: 354 KTNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTM 413

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT
Sbjct: 414 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 473

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of HG10001939 vs. NCBI nr
Match: KAA0044733.1 (regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. makuwa])

HSP 1 Score: 833.2 bits (2151), Expect = 1.1e-237
Identity = 451/472 (95.55%), Postives = 460/472 (97.46%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 411 MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 470

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 471 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 530

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 531 AFHLVLSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 590

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALISQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 591 QCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 650

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSKTS  +SNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGLT
Sbjct: 651 LSKTSITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLT 710

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           K NNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPLPAPANHSYQSVM+PQPTM
Sbjct: 711 KNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTM 770

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLT
Sbjct: 771 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLT 830

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 831 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 882

[Close]

BLAST of HG10001939 vs. NCBI nr
Match: XP_008453770.1 (PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo])

HSP 1 Score: 833.2 bits (2151), Expect = 1.1e-237
Identity = 451/472 (95.55%), Postives = 460/472 (97.46%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 174 AFHLVLSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALISQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSKTS  +SNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGLT
Sbjct: 294 LSKTSITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLT 353

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           K NNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPLPAPANHSYQSVM+PQPTM
Sbjct: 354 KNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTM 413

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLT
Sbjct: 414 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLT 473

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of HG10001939 vs. NCBI nr
Match: XP_038891977.1 (regulation of nuclear pre-mRNA domain-containing protein 1B [Benincasa hispida])

HSP 1 Score: 830.5 bits (2144), Expect = 7.4e-237
Identity = 452/472 (95.76%), Postives = 459/472 (97.25%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALK+VLE GDNHGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKNVLENGDNHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTR +KDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTR-IKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK
Sbjct: 174 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALISQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSKTST +SNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGL 
Sbjct: 294 LSKTSTTDSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLA 353

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           KTNNGLNAFASK MR SA SITKPE   VGSDPNVFMSMQPLPAP NH+YQSVM+PQPTM
Sbjct: 354 KTNNGLNAFASKPMRPSAGSITKPE---VGSDPNVFMSMQPLPAPTNHTYQSVMVPQPTM 413

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQAPNSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT
Sbjct: 414 QSQAPNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 473

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQPI LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 QQMLQQPIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521

[Close]

BLAST of HG10001939 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 7.6e-11
Identity = 70/250 (28.00%), Postives = 117/250 (46.80%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           +K+  LYLAND++QNSKRKG EF  EF  VL  A   V  + D   K  + RL++IW++R
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQER 114

Query: 63  KVFGSR-TRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLS---IGSAAEKI 122
            V+G    + LK  +   ++PPP    +K++     +KR  + I+ +      GS + + 
Sbjct: 115 SVYGGEFIQQLKLSMEDSKSPPPKAAEEKKS-----LKRTFQQIQEEEDDDYPGSYSPQD 174

Query: 123 VSAFHLVLSEYSNEETEMTNCNSAVQRVRKM-------ENDVDFACSMAKNPQRKKLAKE 182
            SA  L+  E      ++ N  S    VR+          DV     +      ++L+K 
Sbjct: 175 PSAGPLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKT 234

Query: 183 LEEEESILKQCIEKLQSVEASRMALISQL-------KEALHVQESELENIRTHM-QVAQA 234
           ++E   +L +   +L +    R  L   L       KE L  +E +LE  +  + +V Q 
Sbjct: 235 VDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQV 294

[Close]

BLAST of HG10001939 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 70/250 (28.00%), Postives = 116/250 (46.40%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           +K+  LYLAND++QNSKRKG EF  EF  VL  A   V  + D   K  + RL++IW++R
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQER 114

Query: 63  KVFGSR-TRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLS---IGSAAEKI 122
            V+G    + LK  +   ++PPP     K T   + +KR  + I+ +      GS + + 
Sbjct: 115 SVYGGEFIQQLKLSMEDSKSPPP-----KATEEKKSLKRTFQQIQEEEDDDYPGSYSPQD 174

Query: 123 VSAFHLVLSEYSNEETEMTNCNSAVQRVRKM-------ENDVDFACSMAKNPQRKKLAKE 182
            SA  L+  E      ++ N  S    VR+          DV     +      ++L+K 
Sbjct: 175 PSAGPLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKT 234

Query: 183 LEEEESILKQCIEKLQSVEASRMALISQL-------KEALHVQESELENIRTHM-QVAQA 234
           ++E   +L +   +L +    R  L   L       K+ L  +E +LE  +  + +V Q 
Sbjct: 235 VDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQV 294

[Close]

BLAST of HG10001939 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 64/246 (26.02%), Postives = 111/246 (45.12%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           +K+  LYLAND++QNSKRKG EF  +F  V+  A K V  + D   K  + R++ IWE+R
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEER 114

Query: 63  KVFGSRT-RSLKDVILGEEAPPPLEFSKKRT-RSVRIVKRDSRSIRTKLSIGSAAEKIVS 122
            V+ +     LK  + G++ P      +KRT   +++ + ++ S     S+GS +E    
Sbjct: 115 SVYENDVLEQLKQALYGDKKP------RKRTYEQIKVDENENCS-----SLGSPSEP-PQ 174

Query: 123 AFHLV--LSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESI 182
              LV  L +  N  +     +  +  +     +V     +      ++L+K +E+   +
Sbjct: 175 TLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACML 234

Query: 183 LKQCIEKLQSVEASRMALISQL-------KEALHVQESELENIRTHMQVAQAQAEEAKNM 238
           L     +L +    R  L   L       KEAL  +E +LE  +  +       +E ++ 
Sbjct: 235 LADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSR 288

[Close]

BLAST of HG10001939 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 64/246 (26.02%), Postives = 111/246 (45.12%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           +K+  LYLAND++QNSKRKG EF  +F  V+  A K V  + D   K  + R++ IWE+R
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEER 114

Query: 63  KVFGSRT-RSLKDVILGEEAPPPLEFSKKRT-RSVRIVKRDSRSIRTKLSIGSAAEKIVS 122
            V+ +     LK  + G++ P      +KRT   +++ + ++ S     S+GS +E    
Sbjct: 115 SVYENDVLEQLKQALYGDKKP------RKRTYEQIKVDENENCS-----SLGSPSEP-PQ 174

Query: 123 AFHLV--LSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESI 182
              LV  L +  N  +     +  +  +     +V     +      ++L+K +E+   +
Sbjct: 175 TLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACML 234

Query: 183 LKQCIEKLQSVEASRMALISQL-------KEALHVQESELENIRTHMQVAQAQAEEAKNM 238
           L     +L +    R  L   L       KEAL  +E +LE  +  +       +E ++ 
Sbjct: 235 LADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSR 288

[Close]

BLAST of HG10001939 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 64/246 (26.02%), Postives = 111/246 (45.12%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           +K+  LYLAND++QNSKRKG EF  +F  V+  A K V  + D   K  + R++ IWE+R
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEER 114

Query: 63  KVFGSRT-RSLKDVILGEEAPPPLEFSKKRT-RSVRIVKRDSRSIRTKLSIGSAAEKIVS 122
            V+ +     LK  + G++ P      +KRT   +++ + ++ S     S+GS +E    
Sbjct: 115 SVYENDVLEQLKQALYGDKKP------RKRTYEQIKVDENENCS-----SLGSPSEP-PQ 174

Query: 123 AFHLV--LSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESI 182
              LV  L +  N  +     +  +  +     +V     +      ++L+K +E+   +
Sbjct: 175 TLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACML 234

Query: 183 LKQCIEKLQSVEASRMALISQL-------KEALHVQESELENIRTHMQVAQAQAEEAKNM 238
           L     +L +    R  L   L       KEAL  +E +LE  +  +       +E ++ 
Sbjct: 235 LADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSR 288

[Close]

BLAST of HG10001939 vs. ExPASy TrEMBL
Match: A0A0A0KWH8 (CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV=1)

HSP 1 Score: 835.9 bits (2158), Expect = 8.5e-239
Identity = 452/472 (95.76%), Postives = 462/472 (97.88%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 174 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALI+QLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           +SKTS I+SNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+T LT
Sbjct: 294 VSKTSIIDSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLT 353

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           KTNNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPL APANHSYQSVM+PQPTM
Sbjct: 354 KTNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTM 413

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT
Sbjct: 414 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 473

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of HG10001939 vs. ExPASy TrEMBL
Match: A0A5A7TML3 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00170 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.5e-238
Identity = 451/472 (95.55%), Postives = 460/472 (97.46%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 411 MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 470

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 471 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 530

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 531 AFHLVLSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 590

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALISQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 591 QCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 650

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSKTS  +SNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGLT
Sbjct: 651 LSKTSITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLT 710

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           K NNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPLPAPANHSYQSVM+PQPTM
Sbjct: 711 KNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTM 770

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLT
Sbjct: 771 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLT 830

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 831 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 882

[Close]

BLAST of HG10001939 vs. ExPASy TrEMBL
Match: A0A1S3BWJ3 (regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3656 GN=LOC103494401 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.5e-238
Identity = 451/472 (95.55%), Postives = 460/472 (97.46%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LK
Sbjct: 174 AFHLVLSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASR+ALISQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSKTS  +SNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGLT
Sbjct: 294 LSKTSITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLT 353

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           K NNGLNAFASK MRSSA+SITKPE SAVGSDPNVFMSMQPLPAPANHSYQSVM+PQPTM
Sbjct: 354 KNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTM 413

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQA NSQTQYQMLPSAPSQQYLQL+NGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLT
Sbjct: 414 QSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLT 473

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQ I LAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 QQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of HG10001939 vs. ExPASy TrEMBL
Match: A0A6J1C8E3 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111008373 PE=4 SV=1)

HSP 1 Score: 795.8 bits (2054), Expect = 9.7e-227
Identity = 440/475 (92.63%), Postives = 452/475 (95.16%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLP+ALKDVLE GD+HGKNVISRLVDIWE
Sbjct: 54  MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPAALKDVLENGDSHGKNVISRLVDIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 114 QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 173

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AFHLVLSEYSNEETEMT C SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK
Sbjct: 174 AFHLVLSEYSNEETEMTKCTSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 233

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCIEKLQSVEASRMAL+SQLKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 234 QCIEKLQSVEASRMALMSQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 293

Query: 241 LSKTS--TINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTG 300
           LSK+S  TI+SNAKAGQ  KKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTG
Sbjct: 294 LSKSSTMTIDSNAKAGQ--KKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTG 353

Query: 301 LTKTNNGLN-AFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQ 360
           LTKTNNGLN AF  K   +SA+S TKP+ S VGSDPNVFMSMQPLPAPANHSYQSV++PQ
Sbjct: 354 LTKTNNGLNTAFTPKPTSTSANSNTKPKTS-VGSDPNVFMSMQPLPAPANHSYQSVIVPQ 413

Query: 361 PTMQSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVV 420
           PTMQS APNSQTQYQMLP+APSQQYLQL+NGVL PYGYGSLPSSTP PPPPMPHMVSPVV
Sbjct: 414 PTMQSHAPNSQTQYQMLPNAPSQQYLQLSNGVLNPYGYGSLPSSTPAPPPPMPHMVSPVV 473

Query: 421 PLTQQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           PLTQQMLQQPI LAQQPSPMI T PVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 474 PLTQQMLQQPIPLAQQPSPMIHTLPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of HG10001939 vs. ExPASy TrEMBL
Match: A0A6J1ERJ2 (regulation of nuclear pre-mRNA domain-containing protein 2-like isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111435888 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.6e-224
Identity = 428/472 (90.68%), Postives = 448/472 (94.92%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           M QKVPLLYLANDILQNSKRKGNEFV+EFWKVLPSALKDVL+  DNHGKNVISRLVDIWE
Sbjct: 1   MAQKVPLLYLANDILQNSKRKGNEFVSEFWKVLPSALKDVLDHADNHGKNVISRLVDIWE 60

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120
           QRKVFGSRTRSLKDVIL EEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS
Sbjct: 61  QRKVFGSRTRSLKDVILREEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVS 120

Query: 121 AFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILK 180
           AF+LVLSE SNEETEMTNCNSAVQRVRKMENDVDFACS+AKNPQRKKLAKELEEEESILK
Sbjct: 121 AFYLVLSECSNEETEMTNCNSAVQRVRKMENDVDFACSVAKNPQRKKLAKELEEEESILK 180

Query: 181 QCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGY 240
           QCI+KLQSVE +RMALIS LKEALHVQESELENIRT MQVAQAQAEEAKNMQNRLNDEGY
Sbjct: 181 QCIQKLQSVEGNRMALISHLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY 240

Query: 241 LSKTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLT 300
           LSK STI+SNAKAG++P KSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNT LT
Sbjct: 241 LSKRSTIDSNAKAGRSPNKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTVLT 300

Query: 301 KTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTM 360
           KTNNG NAF    +R SA+SITKPE SA+ SDPNVFMSMQPLPAPANHSYQSVM+PQP M
Sbjct: 301 KTNNGSNAFTPNPVR-SANSITKPEASAIVSDPNVFMSMQPLPAPANHSYQSVMVPQPAM 360

Query: 361 QSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLT 420
           QSQAPNSQT YQ+LP+APSQQY+QL+NGVLTPYGYGSLPSSTPVPPPP+P MVSP+VPLT
Sbjct: 361 QSQAPNSQTPYQLLPNAPSQQYMQLSNGVLTPYGYGSLPSSTPVPPPPIPRMVSPMVPLT 420

Query: 421 QQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 473
           QQMLQQP+ LAQQPSPMIQTQPVPF QQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 421 QQMLQQPMPLAQQPSPMIQTQPVPFAQQPLAPSFRPLQPPGMVYYGHPPPSQ 471

[Close]

BLAST of HG10001939 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 358.6 bits (919), Expect = 7.6e-99
Identity = 235/479 (49.06%), Postives = 303/479 (63.26%), Query Frame = 0


Query: 1   MVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWE 60
           M QKVPLLYLANDILQNSKR+GNEFV EFW VLP ALKD++ +GD++GK+ ++R++ IWE
Sbjct: 54  MDQKVPLLYLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWE 113

Query: 61  QRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL-SIGSAAEKIV 120
           +R+VFGSR++SLKDV+LGE+ P PL+ SKKR R  +  KR+S+S RTKL S G  AEKI 
Sbjct: 114 ERRVFGSRSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVAEKIA 173

Query: 121 SAFHLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAK-NPQRKKLAKELEEEESI 180
           SA+HLV++E SNEE EM  C SAV+R+RKME DV+ ACS AK NP+RK LAKELEEEE +
Sbjct: 174 SAYHLVVAENSNEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLAKELEEEEYL 233

Query: 181 LKQCIEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDE 240
           L+QCIEKL+SV+ SR +L++QLK+AL  QESEL+N++  +QVA+ Q EEA+NMQ RLNDE
Sbjct: 234 LRQCIEKLKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDE 293

Query: 241 GYLSKTST-------INSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAA 300
            Y SK +T        N N K+GQ  K + A+IAA     L AS+SS MIM SVLS+FAA
Sbjct: 294 DYTSKQTTAATTITETNDNTKSGQASKMTPASIAA----MLTASTSSHMIMQSVLSSFAA 353

Query: 301 EEAKNTGLTKTNNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQ 360
           E  K +GL+K                 S  T P      S P               SY 
Sbjct: 354 EATKTSGLSK-----------------SESTVPVSDTNASFP---------------SYN 413

Query: 361 SVMLPQPTMQSQAPNSQTQYQMLPSAPSQQYLQLTNGVLTPYGYGSLPSSTP--VPPPPM 420
           +        Q+Q P +Q QY ++P+ P  Q+L+    +  PY +G++P   P   PPPP 
Sbjct: 414 N-------SQNQTPTTQGQYHVIPNPPPPQFLK-PPVMNNPYAFGNIPLMPPGLPPPPPP 466

Query: 421 PHMVSPVVPLTQQMLQQPISLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHP 469
           PH++        Q  Q P S + Q             Q    P+F   QPPG++YYG P
Sbjct: 474 PHLIG------NQQPQIPQSNSAQ-------------QSQQGPTF---QPPGIMYYGAP 466

[Close]

BLAST of HG10001939 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 349.0 bits (894), Expect = 6.1e-96
Identity = 216/419 (51.55%), Postives = 282/419 (67.30%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           QKVPLLYLANDILQNSKR+GNEFV EFWKVLP ALKD++  GD++GK V+SRLV+IWE+R
Sbjct: 56  QKVPLLYLANDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEER 115

Query: 63  KVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAF 122
           +VFGSR++SLKDV+L EEAPPPL+ SKKR R  +  KRDS+S +TKLS G  +EKIVSAF
Sbjct: 116 RVFGSRSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAF 175

Query: 123 HLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILKQC 182
           +LV +E SNEETEM  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE+IL+Q 
Sbjct: 176 NLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQS 235

Query: 183 IEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGYLS 242
           +EKL+SVE SR +L++ L+EAL  QESELEN+++ +QVAQ Q EEA+NMQ RLN+E    
Sbjct: 236 VEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE---- 295

Query: 243 KTSTINSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKT 302
            T   N+N  +GQ+ K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+
Sbjct: 296 -TPVNNNNGTSGQSAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKS 355

Query: 303 NNGLNAFASKSMRSSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTMQS 362
           N                           SD N F+                         
Sbjct: 356 NT--------------------------SDTNAFV------------------------- 407

Query: 363 QAPNSQTQYQMLPS-APSQQYLQLTNGVLTPYGYGSLPSSTP--VPPPP----MPHMVS 415
             P +  QY ++P+ A SQQ+         PYG+G++P   P  +PPPP     PHM++
Sbjct: 416 -VPPNPQQYHIIPNPAASQQF---------PYGFGNIPLMPPGALPPPPPGTLPPHMMN 407

[Close]

BLAST of HG10001939 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 226.1 bits (575), Expect = 5.9e-59
Identity = 159/346 (45.95%), Postives = 214/346 (61.85%), Query Frame = 0


Query: 76  ILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLSEYSNEETE 135
           +L EEAPPPL+ SKKR R  +  KRDS+S +TKLS G  +EKIVSAF+LV +E SNEETE
Sbjct: 1   MLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAENSNEETE 60

Query: 136 MTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILKQCIEKLQSVEASRMA 195
           M  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE+IL+Q +EKL+SVE SR +
Sbjct: 61  MNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLKSVEESRTS 120

Query: 196 LISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGYLSKTSTINSNAKAGQ 255
           L++ L+EAL  QESELEN+++ +QVAQ Q EEA+NMQ RLN+E     T   N+N  +GQ
Sbjct: 121 LVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE-----TPVNNNNGTSGQ 180

Query: 256 TPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNGLNAFASKSMR 315
           + K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+N            
Sbjct: 181 SAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNT----------- 240

Query: 316 SSASSITKPEVSAVGSDPNVFMSMQPLPAPANHSYQSVMLPQPTMQSQAPNSQTQYQMLP 375
                          SD N F+                           P +  QY ++P
Sbjct: 241 ---------------SDTNAFV--------------------------VPPNPQQYHIIP 279

Query: 376 S-APSQQYLQLTNGVLTPYGYGSLPSSTP--VPPPP----MPHMVS 415
           + A SQQ+         PYG+G++P   P  +PPPP     PHM++
Sbjct: 301 NPAASQQF---------PYGFGNIPLMPPGALPPPPPGTLPPHMMN 279

[Close]

BLAST of HG10001939 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 149.4 bits (376), Expect = 7.0e-36
Identity = 151/468 (32.26%), Postives = 225/468 (48.08%), Query Frame = 0


Query: 3   QKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLEKGDNHGKNVISRLVDIWEQR 62
           Q++  LYLANDILQNS+RKG+EFV EFWKVLP AL+D++E GD+ G+    RLV+IWE+R
Sbjct: 56  QRLAYLYLANDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEER 115

Query: 63  KVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAF 122
           KVFGSR + LK+ +LG +        +  TR+  +V     S+  +   GS  EK+VSA 
Sbjct: 116 KVFGSRGQILKEELLGRQ-------PENGTRNGNLVPL-KLSVPQRQVNGSTLEKVVSAV 175

Query: 123 HLVLSEYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILKQC 182
            ++     +E+  +    +A   + K   +V+   S    P    + KEL+ +  IL+ C
Sbjct: 176 EVLHGVQIDEDALVGKSTNAAGYLEKATQEVERDLSSGHAP-GPAVVKELQGQHVILRDC 235

Query: 183 IEKLQSVEASRMALISQLKEALHVQESELENIRTHMQVAQAQAEEAKNMQNRLNDEGYLS 242
           IE+L ++E SR +LIS L+EAL  QE +LE +R H+Q+A+ Q++   ++  +L D G  S
Sbjct: 236 IEQLGAMETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCRQLLDHGGSS 295

Query: 243 KTST-----------INSNAKAGQT------------------------PKKSAAAIAAE 302
           +              ++S A A Q+                        P+K+A   AA 
Sbjct: 296 QPPATEEEESKEVIKVSSTAAAPQSFTHSDVEQSAPVMFASNPTQSLEDPRKTA---AAA 355

Query: 303 VADKLAASSSSQMIMTSVLSTFAAE----EAKNTGLTKTNNGLNAFASKSMR-------- 362
           V  KL AS+SS  +++ VLS+ A+E          +T+T + ++    K  +        
Sbjct: 356 VVAKLTASTSSAEMLSYVLSSLASEGIIGNNNPPAVTETLSSVDFPPEKRPKLQNHDQSY 415

Query: 363 --------SSASSITKPE----VSAVGSDPNVFMSMQPLPAPANHS------YQSVMLPQ 405
                   ++ SS T P+           P     +QP P P NH+        S    Q
Sbjct: 416 LSPHHQNTATTSSSTPPQPLPPPPPFQLQPQFLQPLQP-PGPVNHTPFNYTIATSTATTQ 475

The following BLAST results are available for this feature:

BLAST of HG10001939 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637566.1	1.8e-238	95.76	hypothetical protein CSA_017843 [Cucumis sativus]	[more]
XP_031745821.1	1.8e-238	95.76	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucumis sativu...	[more]
KAA0044733.1	1.1e-237	95.55	regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. m...	[more]
XP_008453770.1	1.1e-237	95.55	PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis ...	[more]
XP_038891977.1	7.4e-237	95.76	regulation of nuclear pre-mRNA domain-containing protein 1B [Benincasa hispida]	[more]

BLAST of HG10001939 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CSU0	7.6e-11	28.00	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q9NQG5	1.0e-10	28.00	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q0P5J9	1.3e-07	26.02	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	1.3e-07	26.02	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	1.3e-07	26.02	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of HG10001939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWH8	8.5e-239	95.76	CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV...	[more]
A0A5A7TML3	5.5e-238	95.55	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var....	[more]
A0A1S3BWJ3	5.5e-238	95.55	regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3...	[more]
A0A6J1C8E3	9.7e-227	92.63	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica ch...	[more]
A0A6J1ERJ2	1.6e-224	90.68	regulation of nuclear pre-mRNA domain-containing protein 2-like isoform X6 OS=Cu...	[more]

BLAST of HG10001939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10060.1	7.6e-99	49.06	ENTH/VHS family protein	[more]
AT5G65180.1	6.1e-96	51.55	ENTH/VHS family protein	[more]
AT5G65180.2	5.9e-59	45.95	ENTH/VHS family protein	[more]
AT3G26990.1	7.0e-36	32.26	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 197..238
None	No IPR available	COILS	Coil	Coil	coord: 165..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..472
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..469
None	No IPR available	PANTHER	PTHR12460:SF27	ENTH/VHS FAMILY PROTEIN	coord: 1..469
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 1..77 e-value: 3.5E-4 score: 18.8
IPR006569	CID domain	PFAM	PF04818	CID	coord: 3..68 e-value: 9.4E-19 score: 67.8
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 1..81 score: 25.035984
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 2..79 e-value: 7.9E-20 score: 73.1
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 3..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001939.1	HG10001939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003676	nucleic acid binding