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HG10001933 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTAGTACGGAAGCGTTCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGTGAAGAGCCATCCTATGATCAGAATCCCAGAATCGGAGAGATTCCTCCGGTGATGGGCAGCCAAAGTCTGGAAACTGATGTAATGAATTATACCTTACCTTTTGTGTCACCAAGAGGTCGCCGGACAAATCTCTCCGCCTTCAACAAAGACATTAATGACCATTCATCTCTTCACTTTCTCCGCACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCGTGACATTTACATGTACATGTATGATTCTCTCTCTTTTTAATTTAATTACTTCCTCCATCTTTATGCTTCTAACAAAATTATAATAAGTAGTAAAAAAAAAACTTCCGTATAATTTTGGACTACACCCTCATTTTAGTCTTGTTATCTGATTTGTCGCATGTTAAATTATGATTGGAGCCAGCTTAACTTAGGTGTAGCGAGACAATATTCAATAGTCAAAGCTTGTTTCGCTCATGGTTTTGCATGTGCTCTGTCTCCACACAAGTCGAAGGTTCAATTCCTCACATTTACAGTTGTACTAAAAAAAACAATATCTAACAAAAATTTATTGTATTATAATTTTTTTTTTTTAAAAAAAATTAGGTGTTGCTTGATATAAAAACCTATAGTTGTGCGGTCAGACAGTTGTCTAATAAAAAATACATGTAGCCAATTTTTTTTATATAAAGAAGAGAAAAACATAAATGTTTAAATTGTTTTTTTTTTAAAAAAAGAAAATTTGAATAATTATTATTTTTTATTAAAACTGTTTTTAAATATGGAAAAATGAGGTAAACTATTTATAAATATAAAAAAAATTTATTGTCTATCAGCGATACAGCAATAAACAGTAAAAAAAATTTATATTTGTAAATAATTTGATATTTTTTGTTTATAATAATTTCTCTTTTTATATTAGGTAAAAAAAGAAAATCATAGAATTAGGTGCAGGTCAGTTGTAAATAATAATAATAATAATAAAAATTGCAGGATGCGAATAACTCATTAATTCAAGCTCTTTGGGTTGGATATTTTTTTTAAAGAAAAAAATTATAAATTAAAATTGAGTGTGAGTTTGATTTTTGGTTGGTCTGTGTAGGGGAGATACAGCTTTTTGCAGTGCCGAGTGCAGAGAGCAGAAGATAATGGAACAAGATTGCAGAAAAGAGAAGGGCACCACCACCGTCCGTGGCGGAGGCGGCGGCCGGCATAAAGAAACATCACACTTTGGCACCGGTGTATAA ATGATGTTAGTACGGAAGCGTTCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGTGAAGAGCCATCCTATGATCAGAATCCCAGAATCGGAGAGATTCCTCCGGTGATGGGCAGCCAAAGTCTGGAAACTGATGTAATGAATTATACCTTACCTTTTGTGTCACCAAGAGGTCGCCGGACAAATCTCTCCGCCTTCAACAAAGACATTAATGACCATTCATCTCTTCACTTTCTCCGCACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCCGAGTGCAGAGAGCAGAAGATAATGGAACAAGATTGCAGAAAAGAGAAGGGCACCACCACCGTCCGTGGCGGAGGCGGCGGCCGGCATAAAGAAACATCACACTTTGGCACCGGTGTATAA ATGATGTTAGTACGGAAGCGTTCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGTGAAGAGCCATCCTATGATCAGAATCCCAGAATCGGAGAGATTCCTCCGGTGATGGGCAGCCAAAGTCTGGAAACTGATGTAATGAATTATACCTTACCTTTTGTGTCACCAAGAGGTCGCCGGACAAATCTCTCCGCCTTCAACAAAGACATTAATGACCATTCATCTCTTCACTTTCTCCGCACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCCGAGTGCAGAGAGCAGAAGATAATGGAACAAGATTGCAGAAAAGAGAAGGGCACCACCACCGTCCGTGGCGGAGGCGGCGGCCGGCATAAAGAAACATCACACTTTGGCACCGGTGTATAA MMLVRKRSRGQMKRTASVSGITVDLSHVEGEEPSYDQNPRIGEIPPVMGSQSLETDVMNYTLPFVSPRGRRTNLSAFNKDINDHSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECREQKIMEQDCRKEKGTTTVRGGGGGRHKETSHFGTGV Homology
BLAST of HG10001933 vs. NCBI nr
Match: XP_038900837.1 (FCS-Like Zinc finger 6-like [Benincasa hispida]) HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60 Identity = 131/161 (81.37%), Postives = 139/161 (86.34%), Query Frame = 0
BLAST of HG10001933 vs. NCBI nr
Match: XP_022984751.1 (uncharacterized protein LOC111482935 [Cucurbita maxima]) HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59 Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 0
BLAST of HG10001933 vs. NCBI nr
Match: XP_023552992.1 (uncharacterized protein LOC111810518 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.1 bits (588), Expect = 6.6e-57 Identity = 121/156 (77.56%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of HG10001933 vs. NCBI nr
Match: XP_022929436.1 (uncharacterized protein LOC111436011 [Cucurbita moschata]) HSP 1 Score: 228.4 bits (581), Expect = 4.3e-56 Identity = 120/156 (76.92%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of HG10001933 vs. NCBI nr
Match: KAG7015362.1 (hypothetical protein SDJN02_22997, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54 Identity = 117/158 (74.05%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.2e-18 Identity = 61/141 (43.26%), Postives = 76/141 (53.90%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.5e-15 Identity = 59/140 (42.14%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13 Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy TrEMBL
Match: A0A6J1J657 (uncharacterized protein LOC111482935 OS=Cucurbita maxima OX=3661 GN=LOC111482935 PE=3 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59 Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy TrEMBL
Match: A0A6J1EN49 (uncharacterized protein LOC111436011 OS=Cucurbita moschata OX=3662 GN=LOC111436011 PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.1e-56 Identity = 120/156 (76.92%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy TrEMBL
Match: A0A0A0KUK1 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G030990 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy TrEMBL
Match: A0A1S3BYA3 (uncharacterized protein LOC103494409 OS=Cucumis melo OX=3656 GN=LOC103494409 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48 Identity = 111/142 (78.17%), Postives = 120/142 (84.51%), Query Frame = 0
BLAST of HG10001933 vs. ExPASy TrEMBL
Match: A0A6J1C5J8 (uncharacterized protein LOC111008457 OS=Momordica charantia OX=3673 GN=LOC111008457 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 5.1e-39 Identity = 97/147 (65.99%), Postives = 110/147 (74.83%), Query Frame = 0
BLAST of HG10001933 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 92.0 bits (227), Expect = 4.4e-19 Identity = 61/141 (43.26%), Postives = 76/141 (53.90%), Query Frame = 0
BLAST of HG10001933 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.0 bits (201), Expect = 4.6e-16 Identity = 59/140 (42.14%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of HG10001933 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14 Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of HG10001933 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of HG10001933 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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