HG10001885 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTCTGGAACAAGCTTGGATTCGGCTCCAGAGCCTCCGAGGCCTCGCCGGAGTTGTCCGCGATTGCACAGGGTCCTGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCTGGCTGTTTTTGGGGCGTCGAATTGGGGTTTCAGAGAGTGTCGGGTGTGACCAAAACGGAGGTCGGTTACTCTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTACGGGGAAAACCTATCACTCTGAGGTTGTTCGGGTTCAGTATGATCCTAAGGAATGCAGTTATGAGTCTCTGCTTGATGTGTTTTGGGCTCAACATGATCCCACTACTGCTAATCGCCAGGTTGGTTGATTCTTTTCCCTTTTTTAAACCCATTTTTTTATGATGTTTTATGGTTCTTGCCTCAGTTCTTTCGGTTTCGTTTGAAATTTCTACTGGTCAACCTTTGTATGGGTAGTTTCTTTGGGATTCTTGAGGTTTCTGAGTTATTGCATTAAAATTTCGATATCTTTTTTAGAATCGAAGCTTGGATGTTTACCAATATCAACCTTATGTGTTGTTTGGTTAAGGAGGAAAGCAAAGCTTATCCTTGTTTATGAAAAATATAATAGTAACGTAGAGGACAAACAGCCACTGCGTTAGAAGTTCATGAAGGGATGTTTTGTTTCTGTACATGCTTTGTTACTTACAGTATTGTATTTTCACGGCCATACTGAAAGTTGCAAATTTTTCCTTCTGCTTTGCTACAAATGAATGACTCATGTATTTGTTTGGTGTTTCCTGGCGGCGAATAATGTGAATGGAGATGAAGGATGGCTATTTTAATCGCATTTACACATGAGTATGTGATTAAGAAATGTTAAAGCTTATCTAAATTCTAAAGTAGGATGACTGGCAGTCCTAAACATTCCTCAAAGATGCCTGCTCGCTCTATATTCCTCGAGTCAAATGAAAACTGCATTGTCACCCACATTGGATATGCTAGTTTATGTCTCTGTTGCCACACTCGTCTTGCATTGTGCTTTGCTTCTTCAATTGGAACACAAGTTTTTATTGAAGAAATGAAATTGGAAAAGGAGGAACCTCTTAATTTCAAAAGAGGGTACTTTGTTCGTATACTAACTTTCTTATCCATTGTCTGTGTTGGTTTTAAGATTAAGGGTAGAGCATTTGATGACGGTGATTTGAGGGGCGTTGAGAATTTAGCTGAGAAGATTGTTGCCTTTTTGACCAAGTGGCTGTAGCATTTTTCCTTGCAACTTTTTGAGGGTTGAGAATTTAGATGAGAAGAATGGATTGGCTGTAGCATTTTTCCATTGAACTTTTTGAGAGTCGAGAATTTAACTAGGAAGAATGTTGCTTTTTTGACCGAGTGGCTGCAGCATTTCCTTTTGGAACTTGATGCTTCTTGAAATGATATTCGATTGTGTTTAGTTAAAAAAAATGATTTTTTTAGTACGGACATCATTCCAATGGTCAAAGCTCCCTGAATTTTTAGAAAGCTATTTCTCAATGTTTGCCTTGTTTTATCATATATGTAATTATCAGTTGGGGATGCAACTTGTGCATAGGACCAGTTGATCGACATGGTTTCCTTCGGTTGCATTTTCATTGTCTTGATATACTTCAGGCCATAAAAAATGTAGATCGATTCCCTTTTCGTTTGTTGGTTGTTTATTGGGGGTAGGGGTCAAATGTGAAATTCTAAAGAAAGTTGAGTTCTTCTTGTGGCTTGTTTTGCTTGGAAGGATAAACACCATATACTTTATCCAAAGGTTTCCCAATTTAGTTCTTGGTCATAGACTTATGATGTGTTGACACGCATGCGCACAGTCGCACACAGAGATGCACATGCACTTGTGCACTTGGACCCATACACACACGCAGGCAGAGAGTTTAAGGCTTTGATTCACATTCTTTGGTTATGAGACATAATTGTCTTACGTTTTTAGAATTCCTTTTGTGTTCTCCTTCCCTTGATGGGGAAGATTTCTTGGGTAGGCTCCCTTCTATTCTTCTTTTATGGAATATTGGGTTAGAAAGGAATACGAAAGTCTGCAAGCTTTGAATCAGTGATTTCAGGGGATATGGACCTTACTTGACTAGCTTCTCAAATTACTTGCTTATCTCCTTCCAACCAATTTAGGGAAAGATGAAGTATTTTTCAAGGATTATGATAAAGCTAAATATGTTCTTATTGTTTCTGCTTTTTTAAGACCATTCTCTAGTTTGAGCTGCTTGTTTTATTTCTTGTACCGAAAGATGTATCGTACATGATGTTTAGCTGTGAGATAACTTGTCATTGTTTTGCATACGAGTCTTTTCTATTAATCCCTTCCCTAAATGCAAGTAATTTTGATCATAATCTTTGGATTGACAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAAGAGAAAGCTGCTCTAGAATCAATGGAACGCCGCCAGAAGTCATTGAACAGGAAAATCGTGACCGAGATTCTTCCTGCCAAGAAGTTCTACCGAGCGGAGGAATATCATCAGCAATATCTCGAGAAAGGGGGCCGATTTGGCTTCAAGCAATCTGCTGCTAAAGGCTGCAACGACCCAATCCGATGCTACGGTTAG ATGAATCTCTGGAACAAGCTTGGATTCGGCTCCAGAGCCTCCGAGGCCTCGCCGGAGTTGTCCGCGATTGCACAGGGTCCTGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCTGGCTGTTTTTGGGGCGTCGAATTGGGGTTTCAGAGAGTGTCGGGTGTGACCAAAACGGAGGTCGGTTACTCTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTACGGGGAAAACCTATCACTCTGAGGTTGTTCGGGTTCAGTATGATCCTAAGGAATGCAGTTATGAGTCTCTGCTTGATGTGTTTTGGGCTCAACATGATCCCACTACTGCTAATCGCCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAAGAGAAAGCTGCTCTAGAATCAATGGAACGCCGCCAGAAGTCATTGAACAGGAAAATCGTGACCGAGATTCTTCCTGCCAAGAAGTTCTACCGAGCGGAGGAATATCATCAGCAATATCTCGAGAAAGGGGGCCGATTTGGCTTCAAGCAATCTGCTGCTAAAGGCTGCAACGACCCAATCCGATGCTACGGTTAG ATGAATCTCTGGAACAAGCTTGGATTCGGCTCCAGAGCCTCCGAGGCCTCGCCGGAGTTGTCCGCGATTGCACAGGGTCCTGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCTGGCTGTTTTTGGGGCGTCGAATTGGGGTTTCAGAGAGTGTCGGGTGTGACCAAAACGGAGGTCGGTTACTCTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTACGGGGAAAACCTATCACTCTGAGGTTGTTCGGGTTCAGTATGATCCTAAGGAATGCAGTTATGAGTCTCTGCTTGATGTGTTTTGGGCTCAACATGATCCCACTACTGCTAATCGCCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAAGAGAAAGCTGCTCTAGAATCAATGGAACGCCGCCAGAAGTCATTGAACAGGAAAATCGTGACCGAGATTCTTCCTGCCAAGAAGTTCTACCGAGCGGAGGAATATCATCAGCAATATCTCGAGAAAGGGGGCCGATTTGGCTTCAAGCAATCTGCTGCTAAAGGCTGCAACGACCCAATCCGATGCTACGGTTAG MNLWNKLGFGSRASEASPELSAIAQGPDDDIPAPGQQFAQFGAGCFWGVELGFQRVSGVTKTEVGYSQGHIHNPTYEDVCTGKTYHSEVVRVQYDPKECSYESLLDVFWAQHDPTTANRQGNDVGTQYRSGIYFYTPEQEKAALESMERRQKSLNRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGFKQSAAKGCNDPIRCYG Homology
BLAST of HG10001885 vs. NCBI nr
Match: XP_038902063.1 (peptide methionine sulfoxide reductase A1-like [Benincasa hispida]) HSP 1 Score: 409.1 bits (1050), Expect = 2.3e-110 Identity = 192/203 (94.58%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of HG10001885 vs. NCBI nr
Match: KAG6576835.1 (Peptide methionine sulfoxide reductase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014855.1 Peptide methionine sulfoxide reductase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404.4 bits (1038), Expect = 5.6e-109 Identity = 191/203 (94.09%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of HG10001885 vs. NCBI nr
Match: XP_022984405.1 (peptide methionine sulfoxide reductase A1-like [Cucurbita maxima]) HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108 Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. NCBI nr
Match: XP_022922576.1 (peptide methionine sulfoxide reductase A1-like [Cucurbita moschata]) HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108 Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. NCBI nr
Match: XP_023553232.1 (peptide methionine sulfoxide reductase A1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108 Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy Swiss-Prot
Match: Q9SEC2 (Peptide methionine sulfoxide reductase OS=Lactuca sativa OX=4236 PE=2 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 9.0e-94 Identity = 160/204 (78.43%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy Swiss-Prot
Match: P54150 (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MSR4 PE=1 SV=2) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-90 Identity = 155/203 (76.35%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy Swiss-Prot
Match: P54151 (Peptide methionine sulfoxide reductase OS=Brassica napus OX=3708 GN=PMSR PE=2 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.8e-89 Identity = 155/202 (76.73%), Postives = 170/202 (84.16%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy Swiss-Prot
Match: Q336R9 (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MSRA4 PE=2 SV=2) HSP 1 Score: 328.6 bits (841), Expect = 5.1e-89 Identity = 157/208 (75.48%), Postives = 176/208 (84.62%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy Swiss-Prot
Match: Q9FKF7 (Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana OX=3702 GN=MSRA1 PE=2 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 8.2e-87 Identity = 149/203 (73.40%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy TrEMBL
Match: A0A6J1J8I9 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111482712 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 7.9e-109 Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy TrEMBL
Match: A0A6J1E4H9 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111430543 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108 Identity = 190/203 (93.60%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy TrEMBL
Match: A0A6J1JIG1 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111486087 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106 Identity = 185/203 (91.13%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy TrEMBL
Match: A0A5D3D2U6 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00330 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 6.3e-106 Identity = 186/203 (91.63%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of HG10001885 vs. ExPASy TrEMBL
Match: A0A1S3BWQ3 (Protein-methionine-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103494451 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 6.3e-106 Identity = 186/203 (91.63%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of HG10001885 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 ) HSP 1 Score: 334.0 bits (855), Expect = 8.7e-92 Identity = 155/203 (76.35%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of HG10001885 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 ) HSP 1 Score: 321.2 bits (822), Expect = 5.8e-88 Identity = 149/203 (73.40%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of HG10001885 vs. TAIR 10
Match: AT5G07470.1 (peptidemethionine sulfoxide reductase 3 ) HSP 1 Score: 320.9 bits (821), Expect = 7.6e-88 Identity = 151/203 (74.38%), Postives = 172/203 (84.73%), Query Frame = 0
BLAST of HG10001885 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 ) HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78 Identity = 134/183 (73.22%), Postives = 152/183 (83.06%), Query Frame = 0
BLAST of HG10001885 vs. TAIR 10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 104.8 bits (260), Expect = 8.6e-23 Identity = 61/150 (40.67%), Postives = 81/150 (54.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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