HG10001840 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001840
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rab family
Location	Chr11: 956290 .. 956583 (-)
RNA-Seq Expression	HG10001840
Synteny	HG10001840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTAGTCGGGAACAAATGCGATTTAGAGAACATTAGGGACGTGACAGTTGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTTAAAAGGGCTTTCGAAATCGTGATCCGAGAAATATACAACAATGTCAGCAGGAAGGTCCTGAATTCAGATACCTACAAAGCAGAATTATCTGTCAACCGAGTGAGCCTCGTCAACAACGGTGGATCGAAGCAATCAGAAGGCTATTTTTCTTGCTGTTCCAGGTGA

mRNA sequence

ATGATGCTAGTCGGGAACAAATGCGATTTAGAGAACATTAGGGACGTGACAGTTGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTTAAAAGGGCTTTCGAAATCGTGATCCGAGAAATATACAACAATGTCAGCAGGAAGGTCCTGAATTCAGATACCTACAAAGCAGAATTATCTGTCAACCGAGTGAGCCTCGTCAACAACGGTGGATCGAAGCAATCAGAAGGCTATTTTTCTTGCTGTTCCAGGTGA

Coding sequence (CDS)

ATGATGCTAGTCGGGAACAAATGCGATTTAGAGAACATTAGGGACGTGACAGTTGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTTAAAAGGGCTTTCGAAATCGTGATCCGAGAAATATACAACAATGTCAGCAGGAAGGTCCTGAATTCAGATACCTACAAAGCAGAATTATCTGTCAACCGAGTGAGCCTCGTCAACAACGGTGGATCGAAGCAATCAGAAGGCTATTTTTCTTGCTGTTCCAGGTGA

Protein sequence

MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR

Homology

[Close]

BLAST of HG10001840 vs. NCBI nr
Match: XP_038876476.1 (ras-related protein RABA5d-like [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 217

[Close]

BLAST of HG10001840 vs. NCBI nr
Match: XP_008453919.1 (PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related protein RABA5d [Cucumis melo var. makuwa] >TYK16951.1 ras-related protein RABA5d [Cucumis melo var. makuwa])

HSP 1 Score: 188.0 bits (476), Expect = 3.9e-44
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of HG10001840 vs. NCBI nr
Match: XP_004152077.1 (ras-related protein RABA5d [Cucumis sativus] >KGN53130.1 hypothetical protein Csa_014518 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of HG10001840 vs. NCBI nr
Match: KAG6597626.1 (Ras-related protein RABA5d, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.6 bits (457), Expect = 6.3e-42
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDL+NIRDV++EEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK
Sbjct: 122 MLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 181

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           VLNSDTYKAELSVNRVSLVNNGGSKQSE Y SCCSR
Sbjct: 182 VLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of HG10001840 vs. NCBI nr
Match: XP_022932589.1 (ras-related protein RABA5d-like [Cucurbita moschata])

HSP 1 Score: 180.6 bits (457), Expect = 6.3e-42
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDL+NIRDV++EEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK
Sbjct: 122 MLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 181

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           VLNSDTYKAELSVNRVSLVNNGGSKQSE Y SCCSR
Sbjct: 182 VLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy Swiss-Prot
Match: Q9SRS5 (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLE+IR V+VEEG +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180

Query: 62  VLNSDTYKAELSVNRVSLVNN-GGSKQSEGYFSCCSR 98
           +LNSD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 181 LLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy Swiss-Prot
Match: P19892 (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.5e-33
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLENIR V+VEEG +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK
Sbjct: 121 MLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 180

Query: 62  VLNSDTYKAELSVNRVSLV--NNGGSKQSEGYFSCCS 97
            LNSDTYK EL+VNRVSLV  +N  SKQS G FSCCS
Sbjct: 181 QLNSDTYKDELTVNRVSLVKDDNSASKQSSG-FSCCS 216

[Close]

BLAST of HG10001840 vs. ExPASy Swiss-Prot
Match: P28187 (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-32
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           ML+GNKCDLE+IR V+VEEG SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK
Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRK 180

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
            LNSD+YK EL+VNRVSLV N    +    FSCCSR
Sbjct: 181 QLNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of HG10001840 vs. ExPASy Swiss-Prot
Match: Q9SIP0 (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 5.2e-31
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLE+IR V+VEEG +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK
Sbjct: 121 MLVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRK 180

Query: 62  VLNSDTYKAELSV-NRVSLVNNGGSKQSEGY-FSCCS 97
            LNSDTYK ELS+ NRVSLV +     ++G+ FSCCS
Sbjct: 181 QLNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of HG10001840 vs. ExPASy Swiss-Prot
Match: Q9FGK5 (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.5e-17
Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           +LVGNK DL+++R+V+  EG +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRK
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182

Query: 62  VLNSDTYKAELSVNRVSLVNNGGS----KQSEGYF---SCCS 97
           V++S     EL+    + ++NG         +G F    CCS
Sbjct: 183 VMSSQ----ELNKQDPASLSNGKKVVIPSDGQGEFKKGGCCS 220

[Close]

BLAST of HG10001840 vs. ExPASy TrEMBL
Match: A0A5A7TS03 (Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00890 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy TrEMBL
Match: A0A1S3BXI0 (ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy TrEMBL
Match: A0A0A0KU21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017180 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1   MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 60
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 61  KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGY SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy TrEMBL
Match: A0A6J1EXF0 (ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-42
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDL+NIRDV++EEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK
Sbjct: 122 MLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 181

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           VLNSDTYKAELSVNRVSLVNNGGSKQSE Y SCCSR
Sbjct: 182 VLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCSR 217

[Close]

BLAST of HG10001840 vs. ExPASy TrEMBL
Match: A0A6J1I7X8 (ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111470815 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDL+NIRDV++EEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK
Sbjct: 122 MLVGNKCDLDNIRDVSIEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 181

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
           VLNSDTYKAELSVNRVSLVNNGGSKQSE Y SCC R
Sbjct: 182 VLNSDTYKAELSVNRVSLVNNGGSKQSESYLSCCPR 217

[Close]

BLAST of HG10001840 vs. TAIR 10
Match: AT3G07410.1 (RAB GTPase homolog A5B )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLE+IR V+VEEG +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180

Query: 62  VLNSDTYKAELSVNRVSLVNN-GGSKQSEGYFSCCSR 98
           +LNSD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 181 LLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of HG10001840 vs. TAIR 10
Match: AT1G05810.1 (RAB GTPase homolog A5E )

HSP 1 Score: 140.6 bits (353), Expect = 6.7e-34
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLENIR V+VEEG +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK
Sbjct: 164 MLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 223

Query: 62  VLNSDTYKAELSVNRVSLV--NNGGSKQSEGYFSCCS 97
            LNSDTYK EL+VNRVSLV  +N  SKQS G FSCCS
Sbjct: 224 QLNSDTYKDELTVNRVSLVKDDNSASKQSSG-FSCCS 259

[Close]

BLAST of HG10001840 vs. TAIR 10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.6e-33
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           ML+GNKCDLE+IR V+VEEG SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK
Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRK 180

Query: 62  VLNSDTYKAELSVNRVSLVNNGGSKQSEGYFSCCSR 98
            LNSD+YK EL+VNRVSLV N    +    FSCCSR
Sbjct: 181 QLNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of HG10001840 vs. TAIR 10
Match: AT2G31680.1 (RAB GTPase homolog A5D )

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-32
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           MLVGNKCDLE+IR V+VEEG +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK
Sbjct: 121 MLVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRK 180

Query: 62  VLNSDTYKAELSV-NRVSLVNNGGSKQSEGY-FSCCS 97
            LNSDTYK ELS+ NRVSLV +     ++G+ FSCCS
Sbjct: 181 QLNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of HG10001840 vs. TAIR 10
Match: AT5G47520.1 (RAB GTPase homolog A5A )

HSP 1 Score: 87.4 bits (215), Expect = 6.8e-18
Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 2   MLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRK 61
           +LVGNK DL+++R+V+  EG +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRK
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182

Query: 62  VLNSDTYKAELSVNRVSLVNNGGS----KQSEGYF---SCCS 97
           V++S     EL+    + ++NG         +G F    CCS
Sbjct: 183 VMSSQ----ELNKQDPASLSNGKKVVIPSDGQGEFKKGGCCS 220

The following BLAST results are available for this feature:

BLAST of HG10001840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876476.1	7.9e-45	100.00	ras-related protein RABA5d-like [Benincasa hispida]	[more]
XP_008453919.1	3.9e-44	98.97	PREDICTED: ras-related protein RABA5d [Cucumis melo] >KAA0044637.1 ras-related p...	[more]
XP_004152077.1	2.6e-43	96.91	ras-related protein RABA5d [Cucumis sativus] >KGN53130.1 hypothetical protein Cs...	[more]
KAG6597626.1	6.3e-42	94.79	Ras-related protein RABA5d, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022932589.1	6.3e-42	94.79	ras-related protein RABA5d-like [Cucurbita moschata]	[more]

BLAST of HG10001840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRS5	1.9e-33	79.38	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
P19892	9.5e-33	79.38	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
P28187	3.6e-32	75.00	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
Q9SIP0	5.2e-31	73.20	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
Q9FGK5	9.5e-17	50.00	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of HG10001840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TS03	1.9e-44	98.97	Ras-related protein RABA5d OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BXI0	1.9e-44	98.97	ras-related protein RABA5d OS=Cucumis melo OX=3656 GN=LOC103494499 PE=4 SV=1	[more]
A0A0A0KU21	1.2e-43	96.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017180 PE=4 SV=1	[more]
A0A6J1EXF0	3.0e-42	94.79	ras-related protein RABA5d-like OS=Cucurbita moschata OX=3662 GN=LOC111439098 PE...	[more]
A0A6J1I7X8	1.2e-41	93.75	ras-related protein RABA5d-like OS=Cucurbita maxima OX=3661 GN=LOC111470815 PE=4...	[more]

BLAST of HG10001840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07410.1	1.4e-34	79.38	RAB GTPase homolog A5B	[more]
AT1G05810.1	6.7e-34	79.38	RAB GTPase homolog A5E	[more]
AT2G43130.1	2.6e-33	75.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G31680.1	3.7e-32	73.20	RAB GTPase homolog A5D	[more]
AT5G47520.1	6.8e-18	50.00	RAB GTPase homolog A5A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..57 e-value: 1.3E-4 score: -52.3
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 2..97
None	No IPR available	PANTHER	PTHR47979:SF30	RAS-RELATED PROTEIN RABA5C	coord: 2..97
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..95 score: 11.302776
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..95 e-value: 1.0E-16 score: 62.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..68
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..55 e-value: 1.3E-14 score: 54.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..97 score: 9.942218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001840.1	HG10001840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding