HG10001690 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001690
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSmall ubiquitin-related modifier
LocationChr09: 19565494 .. 19567845 (+)
RNA-Seq ExpressionHG10001690
SyntenyHG10001690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGGGTCACAAACACACAACAAGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGGTTTCTTTCTTGAGAAATTAAGTTCATGCTTGAACCCTTTTAATGCTGATATTTCTTTCATTTGCTTTTGATCGCTTGACGTTTTCTGGTTTTTGATCTTTTCTTTCTCTTTCGGATATGTCGGTTGGGCAGCAGGCACCCAAGTAGAAGTATAAATTATAGGCTTGTGGGGTTCTATTATTGAATTGGTTTTAGATTGTTCGCGAAATTTGAAGTCCGATTAAGGGGGAAAAATGGTTAATCGTTTTAAAATTGGAGTTATATGTGACAGGCGCGATGGTTGTATTTGGCAAGTATAATCGTTCTAAAACTTTCCCTCTAAGAATCTTGCATATCGAATTAAGTGATGGGCGGAATTCTAGTTTCCATTTTTTATGTAATATTTGCAGTTTTGTAGGCATTTGGACTGTTCCATGTTTTCTTTCTGTTTGTTATATTCACTCTGGGGTACAAGACCCTGTCGTAGCTTTGATTGATCTCTTGGAAAAGATTTTGAAGCATGCCGTTATAAACTACTATCTTGGATACAGGACTGAGTGTTGGTCCTCCCGTCGTGTTCCAGATAAGCTAGTGATTCTTTGATGTCCTAATGTATTTTCATTGGCATTGATTTAGCACTTGTGGATCGATTACCTGCTGAGTACAGATTTACCTTTTGATTCTTTTAAATAGCGCTTAGGGTGTGTTTGTTTAGCATGAATACTAAATCATTTGTGGGGTTTCTGTGAATTTTGGTAGTATTCTTTTGTTAATTTTGTTGAAATATATTACCAGGTAATCTTCTTCTTCCTTTTTCTTTTTCTCTTTCTTTTCTTTTCCTTTTTTCTTTTTCTTGTAAATTTTCTTTTTATTTATATCACTTCCTTCCAATGAAGTGGTTTTGATGTATTTTAAAGATTCAATTATATGTGCTTTAAACCAAACCTTAAAAAATAGAATGGACATTTCAAGCTCCTGTAGGTTCAGAGCCATTTTATTATATTAAATAATTAGGATTGTACTGTGAAAGCTGGCACATGCCTGAGCAGTAGAAGAAGTAACACAAGTCTGTCAGCCATCTAAATAGTTTATGGGTATTATTTGGGTGCATCTCAAGGTATACTCATCTTTATGCATCTCACTCTCATCACTCACATCAAAGAAAAATTAAAATATTTCAAAAAAAAAAAATTTGTCATATGTCAAATTATGATTGAACATTTTGGTGGGATGCACAAAGACAAGTGCTACCAGGATGCACCCAAGTATTTTTCATAGTTTATATACATTGAAATGTACATTTGTATGGTTTTGTTTTTTCTTTAAAAAAAACCTTGGGAAAAATGCTGCTTTTTGGTCTTCGTTGTGATTATTGATACAAATGATGGCGATTTAATTGGAGGACGTGTTTAATCTATCCGTTGAGTTGTTTTTTATTGAGGCAAGGGAGAGCAAGGAGATTGAAGTGTTTATGAATGCTTAGCTCCATTTCCGTCTTAATCTGTCCTGGAGTGATGGATTCAATCTTTTTTCTTGTCTCCCTGGGAATTTCCTGGACTGAATCAACTTCCCTTTTTCATTCTGTCTGTTTACTCTGTTGTCTTCCCCTGACATGTGTCTCATTTTCTTTTTTCTTCTTTGTTTCACTTTATCTTTTACCGTTTCCTTTCAACCTCTTTCTTCTTTAATCTTTATCATGTTCCTCCTGCAATCATCGTTCTCCTTTTTCCTTCTCTTTTTCCTTTTTGTTTCTTGTTGTTTATTACACCAATTAGTTGGTTAGAAATATATGGTTCAGGAGTGTCAAATTTTTCTTGATCTCTTCCTGCACTTGTGGGATTCCTGTTGTAGGCTTATTTTTGGTATCCATACATTCATTCATTTTCTCAATACAAGTTCAGTTTTTCACCCCAAAAAAAAGTATTGAGTTTATATATTCATGAAAGACTAACCCCTTAATCCTCAATTTTTTATGTACTTTAGGATGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGACGGTCGTCGTCTTCGAGCAGAGCAAACCCCCGACGAGGTAATCCTTTTATCTTATTATTTAAGCAATCCTATATTAAATTCATGTAATTTTTTTTTAATAAGAGCATGCATTTTTATCAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

mRNA sequence

ATGTCGGGGGTCACAAACACACAACAAGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGACGGTCGTCGTCTTCGAGCAGAGCAAACCCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

Coding sequence (CDS)

ATGTCGGGGGTCACAAACACACAACAAGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGACGGTCGTCGTCTTCGAGCAGAGCAAACCCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Homology
[Close]
BLAST of HG10001690 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 4.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]
BLAST of HG10001690 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]
BLAST of HG10001690 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197.6 bits (501), Expect = 5.1e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 302

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 303 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 341

[Close]
BLAST of HG10001690 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.6 bits (501), Expect = 5.1e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of HG10001690 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.2 bits (500), Expect = 6.7e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-41
Identity = 85/91 (93.41%), Postives = 86/91 (94.51%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           RLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95

[Close]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.1e-39
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-23
Identity = 53/95 (55.79%), Postives = 69/95 (72.63%), Query Frame = 0 

Query: 5   TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 64
           T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ F
Sbjct: 21  TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRF 80

Query: 65  LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           L DG R+R +QTP EL+MEDGD+I+A+L Q GG T
Sbjct: 81  LVDGERIRPDQTPAELDMEDGDQIEAVLEQLGGCT 113

[Close]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.5e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.5e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of HG10001690 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 173.3 bits (438), Expect = 9.7e-44
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of HG10001690 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-42
Identity = 85/91 (93.41%), Postives = 86/91 (94.51%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           RLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95

[Close]
BLAST of HG10001690 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 160.6 bits (405), Expect = 6.5e-40
Identity = 85/104 (81.73%), Postives = 86/104 (82.69%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 108

[Close]
BLAST of HG10001690 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.8 bits (242), Expect = 5.2e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of HG10001690 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 7.4e-20
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 12 DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
          DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5  DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72 RAEQTPDELEMEDGDEIDAMLHQTGG 98
          +  QTP+EL +ED DEI+A   Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:
BLAST of HG10001690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150752.14.6e-48100.00small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu... [more]
XP_008456407.11.4e-4799.00PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small... [more]
KAG6570548.15.1e-4798.99Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022943304.15.1e-4798.99small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub... [more]
XP_022970791.16.7e-4798.99small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small... [more]
BLAST of HG10001690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P558521.4e-4291.40Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1... [more]
Q9FLP61.5e-4193.41Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1... [more]
P558579.1e-3989.01Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
O133513.1e-2355.79Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Q9FLP57.3e-2055.06Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1... [more]
BLAST of HG10001690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDV82.2e-48100.00Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3... [more]
A0A5A7UHK76.5e-4899.00Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C3V06.5e-4899.00Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV... [more]
A0A6J1FTW72.5e-4798.99Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P... [more]
A0A6J1JFC92.5e-4798.99Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=... [more]
BLAST of HG10001690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26840.19.7e-4491.40small ubiquitin-like modifier 1 [more]
AT5G55160.11.1e-4293.41small ubiquitin-like modifier 2 [more]
AT5G55160.26.5e-4081.73small ubiquitin-like modifier 2 [more]
AT5G55170.15.2e-2155.06small ubiquitin-like modifier 3 [more]
AT5G55856.17.4e-2052.33Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 22..93
e-value: 2.5E-14
score: 63.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 20..97
score: 15.906139
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 22..92
e-value: 5.3E-25
score: 87.0
NoneNo IPR availableGENE3D3.10.20.90coord: 1..97
e-value: 4.7E-41
score: 141.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availablePANTHERPTHR10562:SF87SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 20..93
e-value: 8.1392E-48
score: 145.064
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001690.1HG10001690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016925 protein sumoylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0031386 protein tag
molecular_function GO:0044389 ubiquitin-like protein ligase binding
molecular_function GO:0005515 protein binding