HG10001687 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001687
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase COP1
LocationChr09: 19506124 .. 19513825 (-)
RNA-Seq ExpressionHG10001687
SyntenyHG10001687
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGGGATCAACCGGAGCCTTAGTTCCGGCGGTGAAGACGGAGCCTGTGTCTTCGTCGATTTCAGCGCCGTCAATTCCCGATTGCTCACTTGCCGAGCTCGACGTCATCGTCGAGGCTTCAGCTCAGTTGGATAAGGACTTCCTCTGCCCAATTTGCATGCAGATCATTAGGGATGCGTTCCTCACTGCCTGTGGTCACAGTTTCTGCTATATGTGCATCATTACTCATCTTCGCAACAAGAGCGATTGCCCTTGCTGTGCTCAACATCTCACCTCCGACCAGCTGTTTCCTAACTTCTTGCTTGACAAGGTTTGTTTTCTGTAATTCACGCGTTTTTATGCGTGGTTGTGCGATTGATGACTTTATACTGTGTCCTGGATTGCTTAATCCCGGTCTTGAGGAAGTTCCGTAACTATTTCTGATATAGGAAAACTTTCGATCGTTTTACTTATATTGTGCTGTTTATGTATCTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTTATAGCGTATTCAATCAGTTACTGGATGATGAATAAGATTACTAGCTTGTCGACCTCTTCTCTTCGGATTCCGTTGGTAATTGGTCTTGTTCCTGAATCGTGCCTCTATTATCGATTTATAGACAATTAACATCACTTAAGCCTTTTTTTTATACTTAGAGTAGCTGAGTTTAAGATTCTAGTTAAATGTAATATATATCTCAGGAAGCGATGAAAGATATTAACTCTTCGATGTCCGGATGATCGATTGTGTTTTTCTGGCTAGAAGAAAGTTTTGGTCTATTTATAGAATTAGACGCTGGACATGACAATATGGTGATATCAGTGTCAGAAATGCGAAGCTCCCATAGATAGGTTTATACAAGAATGATCATTGACTAAGACTACGAAGTGAACTTGCCATCACTAATGATGATTGCTAACGGAAGTTCAGTGAAAAAAATTACGAAGTGAACATATAACATTATATTGCTATATTATATTTCCATACAGCAATATGAAATATCATCCTCTTTTACAGAGAAATCCTCTGTTATTTATACTTTTCCATTTTTTGGCGTGCACGTTTTCTCTATTAATATTCTTGATTAATTTCATCGATGATGCAGTTTAAGCATTGAATTTGACAATATTTAAAGCAAATGTTAAAATGTTGCAATTTTGTGAAGCATGTATATAAATGCCACATTCTACTACTTTTGAGGCTAAAGTACAATTAAGATCTGTGCAGTCGTTGTCTTTTGATTCTTCATATTGATATGGTTTTTACTTTTCTAATTAAAATGATTATTCTTTTATTATTAATGGAATATTATTATGCCAGATAAATATGCTTAATTCTTCGCCTATTCTTTTATTCTAGCCAAAAGTTAGTTCAAGTATCTAATGTATACACATTAGTGAACGGATACGAACATCTTTGGTTTGAAATGATTAATTTGGGAATGCAGCTTATCATGATACGGTTTCTCTGTACCCAATTGTAGCTACTGAAGAAGACATCTGCTCATCAAATAGCAAAAACTGCAACCCCCATTGAACTTTTTCGTCATGCTTTACAAGAGGTTAGACATCAAGGGCCACTACATCTGATTTGCATTTACATAAATTTCAAATTGGAAGTACTGTTTAATATCTTAGCACCTATGGTCTCAATTTCCTCCTTCAAAAATGTTTCTGAATTGTTTGGTTTCTCTGATAGGAGTTGCATTGAGGTTTATGTACATCATGCATTTCAAATTATTCATCATGGGGCAATTCCTCCTTCAAAAATGTTTCTGAATTGTTTGGTTTCTCTGATAGGAGTTGCATTGAGGTTTATGTACATCATGTATTTCAAATTATTCATCATGGGGCAATGATAAACATTACAGTATTCTTATTTTCTTGCTAGGGCTGTGATGTGTCAATTAAGGAGTTGGATTCCCTCTTGGCAATGCTTTCTGAGAAGAAGAGAAAGATGGAACAAGAAGAATCTGATAGAAATATGAAAATTTTAACAGACTTCTTACATTGCCTGAGGAAGCAAAAAGTTAGTGAGCTCAACGAGGTATTTTTTCTCCCACTAGTTCAGTAATATCTTTTGCATTTTGTTGTCCATGCTGTTTGTAGTTTACTACTGCATTTCATATCACTTAACCCTTTTCTATTTGGGCAATTTTAAACTTCGGCAGGTGTTAATGTACTTGTCTTGTTATCAATTGATCAGTTATATGTGATTTGTTGTAGTTGCGGTATGATTATGGTAGACCTCCTGTCCATAGTTATGTGTGAGGTGCAAAAAAGGTAATTTAGAGTTAGAGTTATAAGAGAGACAATTTATACTTTTTAAACTGGCAAGCAGGAGGGCATGAGGTAAGCAATCATCTAGAAGAGATTCTTAGCGAACGGTATGGATACATTTGTTCTGATAACCTGTACTTAAGAAAAACTTTCCAGTTGATTTTGGTTTGTTCAGCACTGTATCTATGCAATCATTTGTCTAATTTATTCTCTCTATTACTATTTTGACAGGTGCAAACTGATCTCCAGTTTATTAAGGCGGACATAAATGCAGTGGAGAGACATAGGATGGAGCTGTCTTGTGCAAGGGACAGGTATTCCATGAAGCTACGTATGGCTGGAGATGATATGAAAGCTAGGGAACCTTGGTCATCATTAATGGATAAGAGAAACGATGGGCCTACCTCTACTTCTTTGAATACCTGGGGTGTCGTGTCTGCCGGGAGTTTTCAAAATAAGAAAGCAGATTCGAGGAGTCAGGTCAGCACTTATGGACTCTACAAAAAGGATGCATTAAATGCGCCAGAACCACAAGTGAATCATACTGGTCTATCTGTTGCAAGGAAAAAACGTGTCCATGCTCAGGTTTAGTTTGACAATTTTTCATTCTTCAATATATACTTCTTTCATCCATTTTTTTTTCAATATAACTCTGAGTCCATCCATTCCCGCCACAGTTATTTTTAGTTTTCAATATTCATTGTTAGTGGTTAGATTAAATAGGGTTTGAATGAGAAGTTTAAAACCCGAATATTCTTCATTCTCCATAACACTGAAAAGGAAATCTGGAGTTCTGTTGGAAACTATTTTATAGTTGGTTTAGTTGAAGAACGTCAAAGAAGAATTGTAGAATTATGATGAATGTAGGTAGTTTGATGAACATTTTGACAGTTATTTTTGTTCTTTCAAATTGGTGAATCCTCTTGAAATTTTATGGTTACTCCCTCTCTTGCCTATATCGATTGGATTAAGCTTTTTTGGCTTGCAATGATAGTTGTCAATTTTTATTCTCTTTTTGAAAAAGAATAAGAGAGAGAGAGAGAGAAAGAAAAGGAAACCTGTTACTTGGGCTCTGGGTCATGGGTTCTTGTGCTACTCATTTCGTCAAACTTTTTCACAACAGCAAAATCTCTGTCAGGATTATGGTTCAAGTAGAGGGAACAACGTTGACTTAGTTGCTCATGAAAAGCAAGAGACCAAATGTTTGTCCTCCTGGGGATTTGATTTCAATCATAGCAGCCTCTGTGGTTCCATCATAACGATTTTAGAATCTGTCGCTTTCTCCATTTTCTCCCTTTTTGATTGATGATTAGTAATATGTGAATGGTGACACTTTGGGTTTGGTCAGATCTTCGTATTGCATGGTTCTATTTTCTTTCTTTCCTTCCTCTTCTTCTTTATGTTTGTTCTTCTGATTCTAGTTCCCTCTATGGCTTCAGTTCAATGACCTACAAGAATGTTATCTGCAAAAGCGACGTCAGCTGCCAAATCAACTGCTTGACCGGCAGGAAAAGGATAAAAATGTTATACACAGAGAAGGCTATAATGCAGGCCTTTCAGATTTTCAATCAGTATGGACTACATTCACGCGATACAGGTAGGACGGCTGACAGAGGTTGTTGTCCTGTAAGATAAATGTATATATTTGGTGCAATAACTGTGGTTAAAACTTCAGATGTGACTAACATCTTGGAACTTCTTTCTGTTGAATAAATAGTCGCTTGAGAGTCATTGCTGAACTTAGACATGGGGACTTATTTCACTCGACCAACCTAGTATCAAGGTAAGGCAGTCTGTTGTCAAGAATGTCAGAAATTTAATTTGATTGGTGAGAATGCAAATTGAAACTGGAACTTTGTCATTTAACTAAAATTATTCATCAGGATTATTGCTGTCACAATATCATGTTCCTCAAGTTTCTGCAAGTTGATTGTTTGGTTTGCTCATATTTCAGCATTGAATTTGACCGAGATGATGAGTTATTTGTTACTGCTGGTGTTTCTCGATGCATAAAAGTCTTCGACTTCTCTTCGGTAATGTCTTTGTTTCGATTCTTTACTCATGGATTTTGTCGTGTGGTGTTTCTCTTAATCATTTTCTGTATTCAGTGAACATGTCAAATCTAATATCAGAATAATTGTTTTAATATTGTTAACTTTGTTAAGCTGTTAGTCTGTTGAGTAGTTTGTTTTAATTAAGTGGTTATTGTATCTAATCCTAGAAATAAGGCTTGTATTTTTCCTTTGTTGTTTTTTTAGTCATTAGCATGCAAACTATGGTTGATTTGATAAAACTATTGCCATAATATGATCTTCCTCTCCAGATAACGATCACTGACATAATTTGTATGAGCAAAGATTTAATGAACGGGACTTTTGGTGTTGATTAACCCTCAGAGAGTTTCTCAGTGGACTATGATTGGCATACTTTTGTCATTTCATGGTACTGATGAGGATGATGATGAAAGGTCTATTTATGAAGCTATGCAACTGCTCTATGACCTTCTTGCTGTTGTTTTATAGATTGTAAATGAACCTCCCGATGTCCATTGTCCTATAGTGGAAATGTCAACACGTGCAAAATTAAGTTGCTTGAGTTGGGACAAGCAATCAAAAAACATTATAGCAAGCAGCGACTATGAGGGTATAGTAACAGTTTGGGATGTAAATAGAGGGCAGGTAAGTCATAACCATATGGTTTCTTAAATTTTACAATGACTACTTTTCTCATATATGATTTAGAGTTTATGCTAGAATAGCTTACTCGTTGAACATTGTGTCTCAGAGCGTGATGGAGTATGAAGAGCATGAAAAACGTGCTTGGAGTGTTGATTTTTCCCGTACAGAACCGTCAAGGCTGGTGTCCGGTAGTGATGATTGCAAGGTAATTAATTAATTTATTTTGGAGAACTATTTGTTCATAATTGTTTGTAGGGTCATTTTGTATTTTAAAAGATGGAATAGTTAACGATATGCTTCAAAATAGATGTGAGTTGTTGCCTGTAGATTGAAGATTATGTGATTCTTCATGATGTACTTTTATTGTAGCATCAATATTTGATAGGATCATATTCTTGCTGCCTCCATTTCCTTGCAAGAACATTGGGATTAGAGGTCGCTGAAAAGTTTTTGTGTTCCTCATTTATCTCCATCTTTTAACACATTTACATATAAATTGGATGTTTGGATTTTATTTTATTTATTCTTTTAATGAAGAATAAGTTTGTTCTTTCAATCGGATCATTATTCATCTTAAAAATGATAAAACTGCCCTTAAATCGACCCCCTGTCAAAATAAAAGTTTGTAATTATCAATGTTTTAAATCAATTAACTGTCATTGGCACAAGAACTAAAAACCAGGTGTACAAAATGCATTCAAATCATATGGACATAATAGAAACTACATAAAGAATTAGATATCATCAGTGTAATCAAAAGGAAAGAGAAAAAATATACGGACACGTGATGTGTGAACCAAATTCTGCTTTAGATATGAACCCATATAGTCATTTTATTATGCTTAGGAGCATATTTATGAATAAATAACATAAAGTTTCAAGTTTGAAATGGTGTATTGTGCCTGGGTTTATTAGTCTCTTGTTCAATTTTTCTATGAACGTTGTAGCAAATTAAGGATGTTTTTTAATTTTTCTACGAACGTTGTAGCAAATTAAGGATGTTTTTTAATTTTTCTACGAACGTTGTAGCAAATTAAGGATGTTTTTCAATCGATACCGTCATTGTACCTTCTCTTGTTAGTTAATTTACGTTTCTCAAACCTACAATTATGAGCCTTATCAAGAATGATTTTACCCAATTGGCCAATAATTAGTGTTAGGACTAGGAGGATTTCCAGAGTAACTGTATCAGAATTTAAAGTGAAGGTGAGGTTTGGGCAGGAAGTACCTCAACTTGATAGCAATGTCAATGTCCTAGTTGTGGTGGTGGTGGGGGGTGGGGCAGACAAAAGCAACTCTTGATTTTTATTGGAATCTTATGATGGTTATGGGTTGACAGTTTACTAATGGCTTGCTGCATCTGCTTTCAACTTCTCATGCAGGTCAAAGTTTGGTGCATGAAACAGGAGGCCAGTGTCCTTGATATCGACATGAAAGCCAATATATGTTGTGTCAAATTCAATCCTGGATCTGGCAATCACATTGCTGTATGTTCCTCCACTTTATTTTTCTGGAGTTTATTCTGGCCTTTTGCACTTGTCTGTTGAGTTTCCTATCTGAGCATCACAGTTCATTTCTGCTTAGGAATTTATCTATTTTTTGCCTGCCTTAGCTTATCGTGCATCTTTTATTCTATGATCAGATCACTCACTCCATGGTTGTGGTTTAGTTTGTTGAAGACCTATTTTTAAATATGTGGCGCCTTATATCATGTTTTTCTTATAGTTTCATAGTTTTTGTCAAATTATCATCGTGCAAAAATTCAAGAAAGTTTCAAGTACAAATTGCTGTTTAATCTATTATCATTCTTTAATTCTAGGATGTTCCTTGGATGGATTTTGTGTGAAATCCCGAAAGTGAAGAAGTAACATTAGAATTGCTTAACATATGTGAATAACATTTTAGAATTACAGCTGAGAATCCTCTATGGAATCCATCAAATTTTCTCGAGAAGTGAATAAAATATACAAAATTAATTGGATTTTGCTTTTTTAATGGCACTACGCAGTACTCATCTAGTCATCTTATAGCACACCACTATTTGGTTTTCTAAAATAGTTATGAAAAAGGAGGCTTGAGGCATGAAATCATTGGCTATTCTTCAGGTTGGTTCAGCAGATCACAATATTCATTATTATGATCTAAGGAACATCAGCCATCCACTTCACGTCTTCACTGGTCACAAGAAAGCTGTGTCATATGTAAAATTTTTATCGAACAGTGAGCTTGCCTCTGCATCTACAGACAGCACTTTACGATTATGGGATGTAAAGGAAAATCTGCCAGTGAGTATATAATTCATCCATTCCAACTTATAAATTTTTTTTAAGGAATTATCCGAATTCTTTCCATTTTGTTTTTGACAGGTTCGTACTTTTAGAGGCCATACAAATGAGAAAAACTTCGTTGGTCTGACCGTGAATAACGAATACATTGGTTGTGGCAGTGAAACAAATGAAGTCTTTGTCTACCACAAGGTTAGTTATATTCAAAGCGGTGGATTTCCATTCTTCATCTTTAAACTAACATAGAGTCTACCTCTGTCTCAGGAAATATCCAGACCTCTGACGTGGCATAGGTTTGGTTCACCTGATGTAGCTGATGTGGAGGACGATTTGGCATCTTATTTCATCAGTGCTGTTTGCTGGAAGAGTGACAGTCCTACTATCCTCACTGCTAACAGTCAAGGAACAATTAAGGTGCTGGTTCTTGCAGTTTAA

mRNA sequence

ATGGACGAGGGATCAACCGGAGCCTTAGTTCCGGCGGTGAAGACGGAGCCTGTGTCTTCGTCGATTTCAGCGCCGTCAATTCCCGATTGCTCACTTGCCGAGCTCGACGTCATCGTCGAGGCTTCAGCTCAGTTGGATAAGGACTTCCTCTGCCCAATTTGCATGCAGATCATTAGGGATGCGTTCCTCACTGCCTGTGGTCACAGTTTCTGCTATATGTGCATCATTACTCATCTTCGCAACAAGAGCGATTGCCCTTGCTGTGCTCAACATCTCACCTCCGACCAGCTGTTTCCTAACTTCTTGCTTGACAAGCTACTGAAGAAGACATCTGCTCATCAAATAGCAAAAACTGCAACCCCCATTGAACTTTTTCGTCATGCTTTACAAGAGGGCTGTGATGTGTCAATTAAGGAGTTGGATTCCCTCTTGGCAATGCTTTCTGAGAAGAAGAGAAAGATGGAACAAGAAGAATCTGATAGAAATATGAAAATTTTAACAGACTTCTTACATTGCCTGAGGAAGCAAAAAGTTAGTGAGCTCAACGAGGTGCAAACTGATCTCCAGTTTATTAAGGCGGACATAAATGCAGTGGAGAGACATAGGATGGAGCTGTCTTGTGCAAGGGACAGGTATTCCATGAAGCTACGTATGGCTGGAGATGATATGAAAGCTAGGGAACCTTGGTCATCATTAATGGATAAGAGAAACGATGGGCCTACCTCTACTTCTTTGAATACCTGGGGTGTCGTGTCTGCCGGGAGTTTTCAAAATAAGAAAGCAGATTCGAGGAGTCAGGTCAGCACTTATGGACTCTACAAAAAGGATGCATTAAATGCGCCAGAACCACAAGTGAATCATACTGGTCTATCTGTTGCAAGGAAAAAACGTGTCCATGCTCAGTTCAATGACCTACAAGAATGTTATCTGCAAAAGCGACGTCAGCTGCCAAATCAACTGCTTGACCGGCAGGAAAAGGATAAAAATGTTATACACAGAGAAGGCTATAATGCAGGCCTTTCAGATTTTCAATCAGTATGGACTACATTCACGCGATACAGCATTGAATTTGACCGAGATGATGAGTTATTTGTTACTGCTGGTGTTTCTCGATGCATAAAAGTCTTCGACTTCTCTTCGATTGTAAATGAACCTCCCGATGTCCATTGTCCTATAGTGGAAATGTCAACACGTGCAAAATTAAGTTGCTTGAGTTGGGACAAGCAATCAAAAAACATTATAGCAAGCAGCGACTATGAGGGTATAGTAACAGTTTGGGATGTAAATAGAGGGCAGAGCGTGATGGAGTATGAAGAGCATGAAAAACGTGCTTGGAGTGTTGATTTTTCCCGTACAGAACCGTCAAGGCTGGTGTCCGGTAGTGATGATTGCAAGGTCAAAGTTTGGTGCATGAAACAGGAGGCCAGTGTCCTTGATATCGACATGAAAGCCAATATATGTTGTGTCAAATTCAATCCTGGATCTGGCAATCACATTGCTGTTGGTTCAGCAGATCACAATATTCATTATTATGATCTAAGGAACATCAGCCATCCACTTCACGTCTTCACTGGTCACAAGAAAGCTGTGTCATATGTAAAATTTTTATCGAACAGTGAGCTTGCCTCTGCATCTACAGACAGCACTTTACGATTATGGGATGTAAAGGAAAATCTGCCAGTTCGTACTTTTAGAGGCCATACAAATGAGAAAAACTTCGTTGGTCTGACCGTGAATAACGAATACATTGGTTGTGGCAGTGAAACAAATGAAGTCTTTGTCTACCACAAGGAAATATCCAGACCTCTGACGTGGCATAGGTTTGGTTCACCTGATGTAGCTGATGTGGAGGACGATTTGGCATCTTATTTCATCAGTGCTGTTTGCTGGAAGAGTGACAGTCCTACTATCCTCACTGCTAACAGTCAAGGAACAATTAAGGTGCTGGTTCTTGCAGTTTAA

Coding sequence (CDS)

ATGGACGAGGGATCAACCGGAGCCTTAGTTCCGGCGGTGAAGACGGAGCCTGTGTCTTCGTCGATTTCAGCGCCGTCAATTCCCGATTGCTCACTTGCCGAGCTCGACGTCATCGTCGAGGCTTCAGCTCAGTTGGATAAGGACTTCCTCTGCCCAATTTGCATGCAGATCATTAGGGATGCGTTCCTCACTGCCTGTGGTCACAGTTTCTGCTATATGTGCATCATTACTCATCTTCGCAACAAGAGCGATTGCCCTTGCTGTGCTCAACATCTCACCTCCGACCAGCTGTTTCCTAACTTCTTGCTTGACAAGCTACTGAAGAAGACATCTGCTCATCAAATAGCAAAAACTGCAACCCCCATTGAACTTTTTCGTCATGCTTTACAAGAGGGCTGTGATGTGTCAATTAAGGAGTTGGATTCCCTCTTGGCAATGCTTTCTGAGAAGAAGAGAAAGATGGAACAAGAAGAATCTGATAGAAATATGAAAATTTTAACAGACTTCTTACATTGCCTGAGGAAGCAAAAAGTTAGTGAGCTCAACGAGGTGCAAACTGATCTCCAGTTTATTAAGGCGGACATAAATGCAGTGGAGAGACATAGGATGGAGCTGTCTTGTGCAAGGGACAGGTATTCCATGAAGCTACGTATGGCTGGAGATGATATGAAAGCTAGGGAACCTTGGTCATCATTAATGGATAAGAGAAACGATGGGCCTACCTCTACTTCTTTGAATACCTGGGGTGTCGTGTCTGCCGGGAGTTTTCAAAATAAGAAAGCAGATTCGAGGAGTCAGGTCAGCACTTATGGACTCTACAAAAAGGATGCATTAAATGCGCCAGAACCACAAGTGAATCATACTGGTCTATCTGTTGCAAGGAAAAAACGTGTCCATGCTCAGTTCAATGACCTACAAGAATGTTATCTGCAAAAGCGACGTCAGCTGCCAAATCAACTGCTTGACCGGCAGGAAAAGGATAAAAATGTTATACACAGAGAAGGCTATAATGCAGGCCTTTCAGATTTTCAATCAGTATGGACTACATTCACGCGATACAGCATTGAATTTGACCGAGATGATGAGTTATTTGTTACTGCTGGTGTTTCTCGATGCATAAAAGTCTTCGACTTCTCTTCGATTGTAAATGAACCTCCCGATGTCCATTGTCCTATAGTGGAAATGTCAACACGTGCAAAATTAAGTTGCTTGAGTTGGGACAAGCAATCAAAAAACATTATAGCAAGCAGCGACTATGAGGGTATAGTAACAGTTTGGGATGTAAATAGAGGGCAGAGCGTGATGGAGTATGAAGAGCATGAAAAACGTGCTTGGAGTGTTGATTTTTCCCGTACAGAACCGTCAAGGCTGGTGTCCGGTAGTGATGATTGCAAGGTCAAAGTTTGGTGCATGAAACAGGAGGCCAGTGTCCTTGATATCGACATGAAAGCCAATATATGTTGTGTCAAATTCAATCCTGGATCTGGCAATCACATTGCTGTTGGTTCAGCAGATCACAATATTCATTATTATGATCTAAGGAACATCAGCCATCCACTTCACGTCTTCACTGGTCACAAGAAAGCTGTGTCATATGTAAAATTTTTATCGAACAGTGAGCTTGCCTCTGCATCTACAGACAGCACTTTACGATTATGGGATGTAAAGGAAAATCTGCCAGTTCGTACTTTTAGAGGCCATACAAATGAGAAAAACTTCGTTGGTCTGACCGTGAATAACGAATACATTGGTTGTGGCAGTGAAACAAATGAAGTCTTTGTCTACCACAAGGAAATATCCAGACCTCTGACGTGGCATAGGTTTGGTTCACCTGATGTAGCTGATGTGGAGGACGATTTGGCATCTTATTTCATCAGTGCTGTTTGCTGGAAGAGTGACAGTCCTACTATCCTCACTGCTAACAGTCAAGGAACAATTAAGGTGCTGGTTCTTGCAGTTTAA

Protein sequence

MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTATPIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSELNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGPTSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHAQFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRYSIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTILTANSQGTIKVLVLAV
Homology
[Close]
BLAST of HG10001687 vs. NCBI nr
Match: XP_038901633.1 (E3 ubiquitin-protein ligase COP1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1274.2 bits (3296), Expect = 0.0e+00
Identity = 635/675 (94.07%), Postives = 645/675 (95.56%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+AVERHRMELSCARDRYSMKLRMAG+DMKAREPWSSLMDKRN+GP
Sbjct: 181 LNEVQTDLQFIKEDISAVERHRMELSCARDRYSMKLRMAGNDMKAREPWSSLMDKRNEGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRS VSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSHVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD QEKDKNVIHREGYNAGLSDFQSV TTFTRY       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDPQEKDKNVIHREGYNAGLSDFQSVLTTFTRYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS VNEPPDVHCPIVEMSTR
Sbjct: 361 ELRHGDLFHSTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSAVNEPPDVHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLH+FTGHKKAVSYVKFL+NSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHIFTGHKKAVSYVKFLTNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ASYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVASYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. NCBI nr
Match: XP_038901634.1 (E3 ubiquitin-protein ligase COP1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1257.3 bits (3252), Expect = 0.0e+00
Identity = 629/675 (93.19%), Postives = 639/675 (94.67%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQK   
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQK--- 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
              VQTDLQFIK DI+AVERHRMELSCARDRYSMKLRMAG+DMKAREPWSSLMDKRN+GP
Sbjct: 181 ---VQTDLQFIKEDISAVERHRMELSCARDRYSMKLRMAGNDMKAREPWSSLMDKRNEGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRS VSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSHVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD QEKDKNVIHREGYNAGLSDFQSV TTFTRY       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDPQEKDKNVIHREGYNAGLSDFQSVLTTFTRYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS VNEPPDVHCPIVEMSTR
Sbjct: 361 ELRHGDLFHSTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSAVNEPPDVHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLH+FTGHKKAVSYVKFL+NSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHIFTGHKKAVSYVKFLTNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ASYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVASYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. NCBI nr
Match: XP_008456402.1 (PREDICTED: E3 ubiquitin-protein ligase COP1 [Cucumis melo] >TYK14562.1 E3 ubiquitin-protein ligase COP1 [Cucumis melo var. makuwa])

HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 624/675 (92.44%), Postives = 637/675 (94.37%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSS+SAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSVSAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+ VERHRMELS ARDRYSMKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQTDLQFIKEDISTVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+LN  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLNGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFT+Y       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTQYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHTTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGN IAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNLIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. NCBI nr
Match: KAA0054476.1 (E3 ubiquitin-protein ligase COP1 [Cucumis melo var. makuwa])

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 623/675 (92.30%), Postives = 637/675 (94.37%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSS+SAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSVSAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+ VERHRMELS ARDRY+MKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQTDLQFIKEDISTVERHRMELSRARDRYAMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+LN  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLNGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFT+Y       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTQYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHTTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGN IAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNLIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. NCBI nr
Match: XP_004143233.1 (E3 ubiquitin-protein ligase COP1 [Cucumis sativus])

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 623/675 (92.30%), Postives = 635/675 (94.07%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSSISAPSIPDCSLAEL  + EASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQ DLQFIK DI+AVERHRMELS ARDRYSMKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQIDLQFIKEDISAVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+L+  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLSGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFTRY       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTRYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHNTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDV DVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVTDVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 960.7 bits (2482), Expect = 8.6e-279
Identity = 484/679 (71.28%), Postives = 560/679 (82.47%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSI----SAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQ 60
           M+E ST  +VPAVK +P +SS+    +     D      ++    +  LDKD LCPICMQ
Sbjct: 1   MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEI---GAPDLDKDLLCPICMQ 60

Query: 61  IIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIA 120
           II+DAFLTACGHSFCYMCIITHLRNKSDCPCC+QHLT++QL+PNFLLDKLLKKTSA  ++
Sbjct: 61  IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVS 120

Query: 121 KTATPIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQ 180
           KTA+P++ FR ALQ GCDVSIKE+D+LL +L+E+KRKMEQEE++RNM+IL DFLHCLRKQ
Sbjct: 121 KTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQ 180

Query: 181 KVSELNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKR 240
           KV ELNEVQTDLQ+IK DINAVERHR++L  ARDRYS+KLRM GDD   R  W    +K 
Sbjct: 181 KVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKN 240

Query: 241 NDGPTSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQ-VNHTGLSVARK 300
             G  S SL+  G    G++QNKK + ++Q S++GL KKDAL+  + Q +N + +S+ARK
Sbjct: 241 QIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARK 300

Query: 301 KRVHAQFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY-- 360
           KR+HAQFNDLQECYLQKRRQL +Q   +QE DK+V+ REGY+ GL+DFQSV TTFTRY  
Sbjct: 301 KRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSR 360

Query: 361 --------------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIV 420
                               SIEFDRDDELF TAGVSRCIKVFDFSS+VNEP D+ CPIV
Sbjct: 361 LRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIV 420

Query: 421 EMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTE 480
           EMSTR+KLSCLSW+K  KN IASSDYEGIVTVWDV   QS+MEYEEHEKRAWSVDFSRTE
Sbjct: 421 EMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTE 480

Query: 481 PSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDL 540
           PS LVSGSDDCKVKVWC +QEASV++IDMKANICCVK+NPGS N+IAVGSADH+IHYYDL
Sbjct: 481 PSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDL 540

Query: 541 RNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNF 600
           RNIS PLHVF+GHKKAVSYVKFLSN+ELASASTDSTLRLWDVK+NLPVRTFRGHTNEKNF
Sbjct: 541 RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNF 600

Query: 601 VGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSD 653
           VGLTVN+EY+ CGSETNEV+VYHKEI+RP+T HRFGSPD+ D E++  SYFISAVCWKSD
Sbjct: 601 VGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSD 660

[Close]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 930.2 bits (2403), Expect = 1.2e-269
Identity = 473/677 (69.87%), Postives = 545/677 (80.50%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           M+E S G LVPAV     S + S     D + A   ++V   + LDKDFLCPICMQII+D
Sbjct: 1   MEEHSVGPLVPAVVKPEPSKNFST----DTTAAGTFLLVPTMSDLDKDFLCPICMQIIKD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCC  +LT+  LFPNFLLDKLLKKTS  QI+KTA+
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTAS 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           P+E FR A+Q+GC+V++KELD+LL +L+EKKRKMEQEE++RNM+IL DFLHCLRKQKV E
Sbjct: 121 PVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           L EVQTDLQFIK DI AVE+HRM+L  ARDRYS+KLRM  DD   R+   S MD  + G 
Sbjct: 181 LKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLNSSGL 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVST--YGLYKKDALNAPEPQ-VNHTGLSVARKKR 300
            S+ LN  G +S+GS   KK D +SQ+S+  +G+ ++D +   + Q +N +GL++ RKKR
Sbjct: 241 ASSPLNLRGGLSSGS-HTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKR 300

Query: 301 VHAQFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY---- 360
           VH QFNDLQECYLQKRRQ  ++   +QE+D N I REGY+ GL DFQSV TTFTRY    
Sbjct: 301 VHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLR 360

Query: 361 ------------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEM 420
                             SIEFDRDD+LF TAGVSR IKVFDFS++VNEP D HCP+VEM
Sbjct: 361 VIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEM 420

Query: 421 STRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPS 480
           +TR+KLSCLSW+K +KN IASSDYEGIVTVW +   +S+MEYEEHEKRAWSVDFSRT+PS
Sbjct: 421 TTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRTDPS 480

Query: 481 RLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRN 540
            LVSGSDDCKVKVWC  QEASVL+IDMKANICCVK+NPGSGN+IAVGSADH+IHYYDLRN
Sbjct: 481 MLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRN 540

Query: 541 ISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVG 600
           IS P+HVFTGHKKAVSYVKFLSN ELASASTDSTLRLWDVK+NLPVRTFRGH NEKNFVG
Sbjct: 541 ISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVG 600

Query: 601 LTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSP 653
           LTV +EYI CGSETNEVFVYHKEIS+PLTWHRFG+ D+ D ED+  SYFISAVCWKSD P
Sbjct: 601 LTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWKSDRP 660

[Close]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.3e-113
Identity = 249/677 (36.78%), Postives = 365/677 (53.91%), Query Frame = 0 

Query: 19  SSSISAPSIPDCSLAEL-DVIVEASAQLDKDFLCPICMQIIRDAFLTACGHSFCYMCIIT 78
           SSS+ + S     LA L + ++ +      DF+CPIC  +I +A++T CGHSFCY CI  
Sbjct: 103 SSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQ 162

Query: 79  HLRNKSDCPCCAQHLTS-DQLFPNFLLDKLLKKTSA----------HQIAKT-ATPIELF 138
            L + + CP C   + + D L+PNFL+++L+ K             H ++ T     ++F
Sbjct: 163 SLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIF 222

Query: 139 RHALQEGCD-VSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSELNEV 198
           +  L    D + +  ++ +L +L +KK+++E E     ++IL +FL   R+ K  +L ++
Sbjct: 223 QDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQI 282

Query: 199 QTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGPTSTS 258
           Q +L  ++ DI  VE    E+S      S    +   +  +    S +       P   S
Sbjct: 283 QKELSVLEEDIKRVE----EMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFS 342

Query: 259 LNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHAQFND 318
                    GS Q KK                     +P  N T    +R+KR+ A F D
Sbjct: 343 ---------GSSQTKK---------------------QPWYNST--LASRRKRLTAHFED 402

Query: 319 LQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY----------- 378
           L++CY   R       + R   D     +      L +FQ   + FTRY           
Sbjct: 403 LEQCYFSTR-------MSRISDDSRTASQ------LDEFQECLSKFTRYNSVRPLATLSY 462

Query: 379 ------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTRAKL 438
                       SIEFDRD + F  AGV++ IKV+++ +++ +  D+H P  EM+  +K+
Sbjct: 463 ASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKI 522

Query: 439 SCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSGS 498
           SC+SW    KN++ASSDYEG V +WD   GQ    Y+EHEKR WSVDF+  +P  L SGS
Sbjct: 523 SCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGS 582

Query: 499 DDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISHPLH 558
           DD KVK+W    + SV  I+ KAN+CCVKF+P S  H+A G ADH +HYYDLRN   P+ 
Sbjct: 583 DDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIM 642

Query: 559 VFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTVNNE 618
           VF GH+KAVSY KF+S  E+ SASTDS L+LW+V +   +R+F+GH NEKNFVGL  N +
Sbjct: 643 VFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGD 702

Query: 619 YIGCGSETNEVFVYHKEISRPLTWHRFGSPDVA---DVEDDLASYFISAVCWKS----DS 652
           YI CGSE N +++Y+K +S+ L   +F +       D ++D  + F+SAVCW++    +S
Sbjct: 703 YIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGES 730

[Close]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 410.2 bits (1053), Expect = 4.3e-113
Identity = 241/647 (37.25%), Postives = 352/647 (54.40%), Query Frame = 0 

Query: 48  DFLCPICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTS-DQLFPNFLLDKL 107
           DF+CPIC  +I +A++T CGHSFCY CI   L + + CP C   + + D L+PNFL+++L
Sbjct: 135 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 194

Query: 108 LKKTSA----------HQIAKT-ATPIELFRHALQEGCD-VSIKELDSLLAMLSEKKRKM 167
           + K             H ++ T     ++F+  L    D + +  ++ +L +L +KK+++
Sbjct: 195 ILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQL 254

Query: 168 EQEESDRNMKILTDFLHCLRKQKVSELNEVQTDLQFIKADINAVERHRMELSCARDRYSM 227
           E E     ++IL +FL   R+ K  +L ++Q +L  ++ DI  VE    E+S      S 
Sbjct: 255 EAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVE----EMSGLYSPVSE 314

Query: 228 KLRMAGDDMKAREPWSSLMDKRNDGPTSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYK 287
              +   +  +    S +       P   S         G+ Q KK              
Sbjct: 315 DSTVPQFEAPSPSHSSIIDSTEYSQPPGFS---------GTSQTKK-------------- 374

Query: 288 KDALNAPEPQVNHTGLSVARKKRVHAQFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHRE 347
                  +P  N T    +R+KR+ A F DL++CY   R       + R   D     + 
Sbjct: 375 -------QPWYNST--LASRRKRLTAHFEDLEQCYFSTR-------MSRISDDSRTASQ- 434

Query: 348 GYNAGLSDFQSVWTTFTRY-----------------------SIEFDRDDELFVTAGVSR 407
                L +FQ   + FTRY                       SIEFDRD + F  AGV++
Sbjct: 435 -----LDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTK 494

Query: 408 CIKVFDFSSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRG 467
            IKV+++ +++ +  D+H P  EM+  +K+SC+SW    KN++ASSDYEG V +WD   G
Sbjct: 495 KIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTG 554

Query: 468 QSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKF 527
           Q    Y+EHEKR WSVDF+  +P  L SGSDD KVK+W    + SV  I+ KAN+CCVKF
Sbjct: 555 QRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKF 614

Query: 528 NPGSGNHIAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLR 587
           +P S  H+A G ADH +HYYDLRN   P+ VF GH+KAVSY KF+S  E+ SASTDS L+
Sbjct: 615 SPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLK 674

Query: 588 LWDVKENLPVRTFRGHTNEKNFVGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSP 647
           LW+V +   +R+F+GH NEKNFVGL  N +YI CGSE N +++Y+K +S+ L   +F + 
Sbjct: 675 LWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTV 732

Query: 648 DVA---DVEDDLASYFISAVCWKS----DSPTILTANSQGTIKVLVL 652
                 D ++D  + F+SAVCW++    +S  ++ ANSQGTIKVL L
Sbjct: 735 KSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQGTIKVLEL 732

[Close]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.9e-86
Identity = 154/303 (50.83%), Postives = 211/303 (69.64%), Query Frame = 0 

Query: 354 SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNI 413
           ++ FDR+ ELF TAGV++ IK+F+ +SIVN+  D+H P+VE++ R+KLS L W+   K+ 
Sbjct: 539 ALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQ 598

Query: 414 IASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQ 473
           IASS+++G+V +WDV R Q V E +EH+KR WS+D S  +P+ L SGSDD  VK+W + Q
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTVKLWSINQ 658

Query: 474 EASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYV 533
             S+  I  KAN+CCV+F   SG  +A GSADH ++YYDLRN   PL    GH K VSYV
Sbjct: 659 GVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYV 718

Query: 534 KFLSNSELASASTDSTLRLWDVK------ENLPVRTFRGHTNEKNFVGLTVNNEYIGCGS 593
           KF+ +S L S+STD+TL+LWD+          P+ +F GHTN KNFVGL+V++ YI  GS
Sbjct: 719 KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGS 778

Query: 594 ETNEVFVYHKEISRPLTWHRFGSPD-VADVEDDLASYFISAVCWKSDSPTILTANSQGTI 650
           ETNEVFVYHK    P+  + F + D ++ +E D AS FIS++CW+  S T++ ANS G I
Sbjct: 779 ETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSSTLVAANSNGNI 838

[Close]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match: A0A5D3CT10 (E3 ubiquitin-protein ligase COP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00470 PE=4 SV=1)

HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 624/675 (92.44%), Postives = 637/675 (94.37%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSS+SAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSVSAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+ VERHRMELS ARDRYSMKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQTDLQFIKEDISTVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+LN  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLNGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFT+Y       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTQYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHTTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGN IAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNLIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match: A0A1S3C4F2 (E3 ubiquitin-protein ligase COP1 OS=Cucumis melo OX=3656 GN=LOC103496353 PE=4 SV=1)

HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 624/675 (92.44%), Postives = 637/675 (94.37%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSS+SAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSVSAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+ VERHRMELS ARDRYSMKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQTDLQFIKEDISTVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+LN  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLNGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFT+Y       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTQYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHTTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGN IAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNLIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match: A0A5A7UJL9 (E3 ubiquitin-protein ligase COP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002520 PE=4 SV=1)

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 623/675 (92.30%), Postives = 637/675 (94.37%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSS+SAPSIPDCSLAELD +VEASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSVSAPSIPDCSLAELDTVVEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIK DI+ VERHRMELS ARDRY+MKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQTDLQFIKEDISTVERHRMELSRARDRYAMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+LN  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLNGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFT+Y       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTQYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHTTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGN IAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNLIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match: A0A0A0KBG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G161200 PE=4 SV=1)

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 623/675 (92.30%), Postives = 635/675 (94.07%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MD+GSTGALVPAVKTEPVSSSISAPSIPDCSLAEL  + EASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDDGSTGALVPAVKTEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFRHALQEGC+VSIKELDSLLAMLSEKKRKMEQEES RNMKILTDFLHCLRKQKVSE
Sbjct: 121 PIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMKILTDFLHCLRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQ DLQFIK DI+AVERHRMELS ARDRYSMKLR AGDDMKAREPW +LMDKRNDGP
Sbjct: 181 LNEVQIDLQFIKEDISAVERHRMELSRARDRYSMKLRKAGDDMKAREPWLTLMDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLYKKD+L+  EPQVNHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYKKDSLSGAEPQVNHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNV+HREGYN GLSDFQSV TTFTRY       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVMHREGYNPGLSDFQSVLTTFTRYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNEPPD HCPIVEMSTR
Sbjct: 361 ELRHGDLFHNTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDAHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV
Sbjct: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH
Sbjct: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           NNEYI CGSETNEVFVYHKEISRPLTWHRFGSPDV DVEDD+ SYFISAVCWKSDSPTIL
Sbjct: 601 NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVTDVEDDVGSYFISAVCWKSDSPTIL 660

[Close]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match: A0A6J1FV28 (E3 ubiquitin-protein ligase COP1 OS=Cucurbita moschata OX=3662 GN=LOC111448360 PE=4 SV=1)

HSP 1 Score: 1227.6 bits (3175), Expect = 0.0e+00
Identity = 613/675 (90.81%), Postives = 628/675 (93.04%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSISAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQIIRD 60
           MDEGSTGALVPAVKTEP+SS+ISAPSIPDCSLAELD + EASAQLDKDFLCPICMQIIRD
Sbjct: 1   MDEGSTGALVPAVKTEPLSSTISAPSIPDCSLAELDTVGEASAQLDKDFLCPICMQIIRD 60

Query: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIAKTAT 120
           AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTS QLFPNFLLDKLLKKTSAHQIAKTAT
Sbjct: 61  AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSVQLFPNFLLDKLLKKTSAHQIAKTAT 120

Query: 121 PIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSE 180
           PIELFR ALQEGCDVSIKELDSLL+MLSEKKRKMEQEESDRNM ILTDFLH LRKQKVSE
Sbjct: 121 PIELFRRALQEGCDVSIKELDSLLSMLSEKKRKMEQEESDRNMNILTDFLHILRKQKVSE 180

Query: 181 LNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKRNDGP 240
           LNEVQTDLQFIKADI+AVERHRMEL CARDRYSMKL MAGDDMKAREPWSSL DKRNDGP
Sbjct: 181 LNEVQTDLQFIKADISAVERHRMELYCARDRYSMKLHMAGDDMKAREPWSSLTDKRNDGP 240

Query: 241 TSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQVNHTGLSVARKKRVHA 300
           TSTSLNTWGVVSAG+FQNKKADSRSQVSTYGLY+KDALN PEPQ NHTGLSVARKKRVHA
Sbjct: 241 TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYRKDALNGPEPQANHTGLSVARKKRVHA 300

Query: 301 QFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY------- 360
           QFNDLQECYLQKRRQLPNQLLD+QEKDKNVIHREGY AGLSDFQSV TTFTRY       
Sbjct: 301 QFNDLQECYLQKRRQLPNQLLDQQEKDKNVIHREGYTAGLSDFQSVLTTFTRYSRLRVIA 360

Query: 361 ---------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTR 420
                          SIEFDRDDELF TAGVSRCIKVFDFSS+VNE  DVHCPIVEMSTR
Sbjct: 361 ELRHGDLFHSTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNESTDVHCPIVEMSTR 420

Query: 421 AKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLV 480
           AKLSCLSW+K SKNIIASSDYEG+VTVWDVNRGQSV+EYEEHEKRAWSVDFS TEPSRLV
Sbjct: 421 AKLSCLSWNKLSKNIIASSDYEGVVTVWDVNRGQSVLEYEEHEKRAWSVDFSCTEPSRLV 480

Query: 481 SGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
           SGSDDCKVKVWCMKQE SVLDIDMKANICCVKFNPGS NHIAVGSADHNIHYYDLR ISH
Sbjct: 481 SGSDDCKVKVWCMKQENSVLDIDMKANICCVKFNPGSSNHIAVGSADHNIHYYDLRKISH 540

Query: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
           PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600

Query: 601 NNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSDSPTIL 654
           N EYI CGSETNE+FVYHKEISRPLTWHRFGSPD ADVEDD+ SYFISAVCWKS+SPTIL
Sbjct: 601 NKEYIACGSETNEIFVYHKEISRPLTWHRFGSPDAADVEDDVGSYFISAVCWKSNSPTIL 660

[Close]
BLAST of HG10001687 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 960.7 bits (2482), Expect = 6.1e-280
Identity = 484/679 (71.28%), Postives = 560/679 (82.47%), Query Frame = 0 

Query: 1   MDEGSTGALVPAVKTEPVSSSI----SAPSIPDCSLAELDVIVEASAQLDKDFLCPICMQ 60
           M+E ST  +VPAVK +P +SS+    +     D      ++    +  LDKD LCPICMQ
Sbjct: 1   MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEI---GAPDLDKDLLCPICMQ 60

Query: 61  IIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTSAHQIA 120
           II+DAFLTACGHSFCYMCIITHLRNKSDCPCC+QHLT++QL+PNFLLDKLLKKTSA  ++
Sbjct: 61  IIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVS 120

Query: 121 KTATPIELFRHALQEGCDVSIKELDSLLAMLSEKKRKMEQEESDRNMKILTDFLHCLRKQ 180
           KTA+P++ FR ALQ GCDVSIKE+D+LL +L+E+KRKMEQEE++RNM+IL DFLHCLRKQ
Sbjct: 121 KTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQ 180

Query: 181 KVSELNEVQTDLQFIKADINAVERHRMELSCARDRYSMKLRMAGDDMKAREPWSSLMDKR 240
           KV ELNEVQTDLQ+IK DINAVERHR++L  ARDRYS+KLRM GDD   R  W    +K 
Sbjct: 181 KVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKN 240

Query: 241 NDGPTSTSLNTWGVVSAGSFQNKKADSRSQVSTYGLYKKDALNAPEPQ-VNHTGLSVARK 300
             G  S SL+  G    G++QNKK + ++Q S++GL KKDAL+  + Q +N + +S+ARK
Sbjct: 241 QIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARK 300

Query: 301 KRVHAQFNDLQECYLQKRRQLPNQLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRY-- 360
           KR+HAQFNDLQECYLQKRRQL +Q   +QE DK+V+ REGY+ GL+DFQSV TTFTRY  
Sbjct: 301 KRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSR 360

Query: 361 --------------------SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIV 420
                               SIEFDRDDELF TAGVSRCIKVFDFSS+VNEP D+ CPIV
Sbjct: 361 LRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIV 420

Query: 421 EMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTE 480
           EMSTR+KLSCLSW+K  KN IASSDYEGIVTVWDV   QS+MEYEEHEKRAWSVDFSRTE
Sbjct: 421 EMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTE 480

Query: 481 PSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDL 540
           PS LVSGSDDCKVKVWC +QEASV++IDMKANICCVK+NPGS N+IAVGSADH+IHYYDL
Sbjct: 481 PSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDL 540

Query: 541 RNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNF 600
           RNIS PLHVF+GHKKAVSYVKFLSN+ELASASTDSTLRLWDVK+NLPVRTFRGHTNEKNF
Sbjct: 541 RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNF 600

Query: 601 VGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPDVADVEDDLASYFISAVCWKSD 653
           VGLTVN+EY+ CGSETNEV+VYHKEI+RP+T HRFGSPD+ D E++  SYFISAVCWKSD
Sbjct: 601 VGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSD 660

[Close]
BLAST of HG10001687 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 319.3 bits (817), Expect = 7.1e-87
Identity = 153/309 (49.51%), Postives = 216/309 (69.90%), Query Frame = 0 

Query: 354  SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNI 413
            S+ FDRD++ F TAGVS+ IK+++F+S+ NE  D+H P +EM  R+KLS + W+   +N 
Sbjct: 728  SLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNY 787

Query: 414  IASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQ 473
            +ASSDY+GIV +WDV  GQ++  + EHEKRAWSVDFS   P++L SGSDDC VK+W + +
Sbjct: 788  LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 847

Query: 474  EASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYV 533
               +  I   AN+CCV+F+P S + +A GS+D   + YDLRN+  P  + +GH KAVSY 
Sbjct: 848  RNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYA 907

Query: 534  KFLSNSELASASTDSTLRLWDVKE--------NLPVRTFRGHTNEKNFVGLTVNNEYIGC 593
            KFL N  L +ASTD+TL+LWD+K+        N    TF GHTNEKNFVGL+ ++ YI C
Sbjct: 908  KFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIAC 967

Query: 594  GSETNEVFVYHKEISRPLTWHRFGSPDV---ADVEDDLASYFISAVCWKSDSPTILTANS 652
            GSETNEV+ YH+ +  P+T ++FGS D     ++E+D  + F+S+VCW+  S  +++A+S
Sbjct: 968  GSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEED-NNLFVSSVCWRKRSNMVVSASS 1027

[Close]
BLAST of HG10001687 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-85
Identity = 192/518 (37.07%), Postives = 295/518 (56.95%), Query Frame = 0 

Query: 147 LSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSELNEVQTDLQFIKADINAVERHRMEL- 206
           L E++  ME  +     ++L +FL  ++++K    +++Q  +  + +DI+ V + ++ L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 207 SCARD----RYSMKLRMAGDDMKAREPWSSLMDKRNDGPTSTSLNTWGVVSAGSFQNKKA 266
              RD      S K    G +  A E  +       +     +L +  + S+   +N K 
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKK 394

Query: 267 DSRSQVSTYGLYKKDALNAPEPQVN-HTGLSVARKKRVHAQFNDLQECYLQKRRQ--LPN 326
                 +T     K A  A +P    ++ LS   +    +  +   +  +   RQ    +
Sbjct: 395 LESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQGGWID 454

Query: 327 QLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRYSIEFDRDDELFVTAGVSRCIKVFDF 386
             L+   K  +   +    A L     + ++    +I FDRD E F TAGV++ IK+F+ 
Sbjct: 455 PFLEGLCKYLS-FSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFEC 514

Query: 387 SSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYE 446
            SI+ +  D+H P+VE+++R+KLS + W+   K+ +ASS++EG+V VWDV R Q V E +
Sbjct: 515 ESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMK 574

Query: 447 EHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNH 506
           EHEKR WS+D+S  +P+ L SGSDD  VK+W + Q  S+  I  KANICCV+F   +G  
Sbjct: 575 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRS 634

Query: 507 IAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKEN 566
           +A GSADH ++YYDLRN   PL    GH K VSYV+F+ +S L S+STD+TL+LWD+  +
Sbjct: 635 LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMS 694

Query: 567 L------PVRTFRGHTNEKNFVGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPD 626
           +      P+ +F GHTN KNFVGL+V++ YI  GSETNEVFVYHK    P+  ++F + D
Sbjct: 695 ISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTID 754

Query: 627 -VADVEDDLASYFISAVCWKSDSPTILTANSQGTIKVL 650
            V+++E D AS FIS+VCW+  S T++ ANS G IK+L
Sbjct: 755 PVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791

[Close]
BLAST of HG10001687 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-85
Identity = 192/518 (37.07%), Postives = 295/518 (56.95%), Query Frame = 0 

Query: 147 LSEKKRKMEQEESDRNMKILTDFLHCLRKQKVSELNEVQTDLQFIKADINAVERHRMEL- 206
           L E++  ME  +     ++L +FL  ++++K    +++Q  +  + +DI+ V + ++ L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 207 SCARD----RYSMKLRMAGDDMKAREPWSSLMDKRNDGPTSTSLNTWGVVSAGSFQNKKA 266
              RD      S K    G +  A E  +       +     +L +  + S+   +N K 
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKK 394

Query: 267 DSRSQVSTYGLYKKDALNAPEPQVN-HTGLSVARKKRVHAQFNDLQECYLQKRRQ--LPN 326
                 +T     K A  A +P    ++ LS   +    +  +   +  +   RQ    +
Sbjct: 395 LESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQGGWID 454

Query: 327 QLLDRQEKDKNVIHREGYNAGLSDFQSVWTTFTRYSIEFDRDDELFVTAGVSRCIKVFDF 386
             L+   K  +   +    A L     + ++    +I FDRD E F TAGV++ IK+F+ 
Sbjct: 455 PFLEGLCKYLS-FSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFEC 514

Query: 387 SSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNIIASSDYEGIVTVWDVNRGQSVMEYE 446
            SI+ +  D+H P+VE+++R+KLS + W+   K+ +ASS++EG+V VWDV R Q V E +
Sbjct: 515 ESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMK 574

Query: 447 EHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQEASVLDIDMKANICCVKFNPGSGNH 506
           EHEKR WS+D+S  +P+ L SGSDD  VK+W + Q  S+  I  KANICCV+F   +G  
Sbjct: 575 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRS 634

Query: 507 IAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKEN 566
           +A GSADH ++YYDLRN   PL    GH K VSYV+F+ +S L S+STD+TL+LWD+  +
Sbjct: 635 LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMS 694

Query: 567 L------PVRTFRGHTNEKNFVGLTVNNEYIGCGSETNEVFVYHKEISRPLTWHRFGSPD 626
           +      P+ +F GHTN KNFVGL+V++ YI  GSETNEVFVYHK    P+  ++F + D
Sbjct: 695 ISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTID 754

Query: 627 -VADVEDDLASYFISAVCWKSDSPTILTANSQGTIKVL 650
            V+++E D AS FIS+VCW+  S T++ ANS G IK+L
Sbjct: 755 PVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791

[Close]
BLAST of HG10001687 vs. TAIR 10
Match: AT3G15354.1 (SPA1-related 3 )

HSP 1 Score: 303.1 bits (775), Expect = 5.3e-82
Identity = 150/303 (49.50%), Postives = 205/303 (67.66%), Query Frame = 0 

Query: 354 SIEFDRDDELFVTAGVSRCIKVFDFSSIVNEPPDVHCPIVEMSTRAKLSCLSWDKQSKNI 413
           ++ FDR+ ELF TAGV++ IK+F+ +SIVN+  D+H P+VE++ R+KLS L W+   K+ 
Sbjct: 539 ALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQ 598

Query: 414 IASSDYEGIVTVWDVNRGQSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCMKQ 473
           IASS+++G+V +WDV R Q V E +EH+KR WS+D S  +P+ L SGSDD          
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDD--------GT 658

Query: 474 EASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISHPLHVFTGHKKAVSYV 533
             S+  I  KAN+CCV+F   SG  +A GSADH ++YYDLRN   PL    GH K VSYV
Sbjct: 659 GVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYV 718

Query: 534 KFLSNSELASASTDSTLRLWDVK------ENLPVRTFRGHTNEKNFVGLTVNNEYIGCGS 593
           KF+ +S L S+STD+TL+LWD+          P+ +F GHTN KNFVGL+V++ YI  GS
Sbjct: 719 KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGS 778

Query: 594 ETNEVFVYHKEISRPLTWHRFGSPD-VADVEDDLASYFISAVCWKSDSPTILTANSQGTI 650
           ETNEVFVYHK    P+  + F + D ++ +E D AS FIS++CW+  S T++ ANS G I
Sbjct: 779 ETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSSTLVAANSNGNI 833

The following BLAST results are available for this feature:
BLAST of HG10001687 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038901633.10.0e+0094.07E3 ubiquitin-protein ligase COP1 isoform X1 [Benincasa hispida][more]
XP_038901634.10.0e+0093.19E3 ubiquitin-protein ligase COP1 isoform X2 [Benincasa hispida][more]
XP_008456402.10.0e+0092.44PREDICTED: E3 ubiquitin-protein ligase COP1 [Cucumis melo] >TYK14562.1 E3 ubiqui... [more]
KAA0054476.10.0e+0092.30E3 ubiquitin-protein ligase COP1 [Cucumis melo var. makuwa][more]
XP_004143233.10.0e+0092.30E3 ubiquitin-protein ligase COP1 [Cucumis sativus][more]
BLAST of HG10001687 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P432548.6e-27971.28E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
P934711.2e-26969.87E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1[more]
Q8NHY24.3e-11336.78E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1[more]
Q9R1A84.3e-11337.25E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2[more]
Q9LJR35.9e-8650.83Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1[more]
BLAST of HG10001687 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CT100.0e+0092.44E3 ubiquitin-protein ligase COP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C4F20.0e+0092.44E3 ubiquitin-protein ligase COP1 OS=Cucumis melo OX=3656 GN=LOC103496353 PE=4 SV... [more]
A0A5A7UJL90.0e+0092.30E3 ubiquitin-protein ligase COP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A0A0KBG50.0e+0092.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G161200 PE=4 SV=1[more]
A0A6J1FV280.0e+0090.81E3 ubiquitin-protein ligase COP1 OS=Cucurbita moschata OX=3662 GN=LOC111448360 P... [more]
BLAST of HG10001687 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32950.16.1e-28071.28Transducin/WD40 repeat-like superfamily protein [more]
AT4G11110.17.1e-8749.51SPA1-related 2 [more]
AT1G53090.12.3e-8537.07SPA1-related 4 [more]
AT1G53090.22.3e-8537.07SPA1-related 4 [more]
AT3G15354.15.3e-8249.50SPA1-related 3 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201
NoneNo IPR availableCOILSCoilCoilcoord: 137..160
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 51..88
e-value: 3.9E-10
score: 39.4
NoneNo IPR availablePANTHERPTHR44080:SF2E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 5..652
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 523..556
score: 10.495596
NoneNo IPR availableCDDcd16504RING-HC_COP1coord: 47..92
e-value: 7.24836E-22
score: 86.9285
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 45..107
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 541..555
score: 40.84
coord: 414..428
score: 25.26
coord: 457..471
score: 37.08
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 430..470
e-value: 7.0E-7
score: 38.9
coord: 388..427
e-value: 0.96
score: 17.1
coord: 516..554
e-value: 3.0E-7
score: 40.1
coord: 340..377
e-value: 3.1
score: 13.9
coord: 557..596
e-value: 10.0
score: 10.7
coord: 471..512
e-value: 0.026
score: 23.7
coord: 609..650
e-value: 360.0
score: 0.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 519..554
e-value: 3.1E-5
score: 24.7
coord: 431..469
e-value: 0.0064
score: 17.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 437..479
score: 9.873505
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 523..563
score: 13.516088
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 51..88
e-value: 4.3E-6
score: 36.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 51..88
score: 11.825393
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 326..653
e-value: 7.7E-137
score: 457.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 33..140
e-value: 2.1E-19
score: 71.5
IPR042755E3 ubiquitin-protein ligase COP1PANTHERPTHR44080E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 5..652
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 541..555
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 66..75
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 353..648

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001687.1HG10001687.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046283 anthocyanin-containing compound metabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0009640 photomorphogenesis
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010119 regulation of stomatal movement
biological_process GO:0009641 shade avoidance
cellular_component GO:0016604 nuclear body
molecular_function GO:0032440 2-alkenal reductase [NAD(P)+] activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0005515 protein binding