HG10001657 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001657
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Chr09: 19177735 .. 19178538 (+)
RNA-Seq Expression	HG10001657
Synteny	HG10001657

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTTCCTCCATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACCACCTCCGACCTCCTCGGCGATGGCCGCATCACCATGAGAAAAACCGTCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACTTAGGCCCATTCTCTGGAGAGCCTCCTTCCTATTTGACTGGAGAATTCCCCGGCGACTACGGCTGGGACACTGCCGGTCTATCCGCCGACCCAGAAACCTTCGCGAAAAACCGTGAGCTAGAAGTCATCCACTCGAGATGGGCCATGCTCGGAGCTCTGGGTTGCGTATTCCCGGAGCTGTTGTCTCGCAACGGAGTGAAATTCGGGGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAAGGTGGGCTCGATTATTTGGGGAACCCGAGCCTAATCCACGCTCAGAGCATTTTAGCCATTTGGGCTTCTCAAGTTGTGCTAATGGGTGCGGTTGAGGGGTACAGAATTGCCGGCGGACCATTGGGGGAAATCACAGACCCAATTTACCCAGGTGGGAGCTTTGATCCATTGGGACTTGCTGATGATCCAGAGGCATTTGCAGAATTGAAAGTGAAGGAACTTAAGAATGGGAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGGCCCTTGGAGAATTTGGCTGATCATTTGGCTGACCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA

mRNA sequence

ATGGCTGCTTCCTCCATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACCACCTCCGACCTCCTCGGCGATGGCCGCATCACCATGAGAAAAACCGTCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACTTAGGCCCATTCTCTGGAGAGCCTCCTTCCTATTTGACTGGAGAATTCCCCGGCGACTACGGCTGGGACACTGCCGGTCTATCCGCCGACCCAGAAACCTTCGCGAAAAACCGTGAGCTAGAAGTCATCCACTCGAGATGGGCCATGCTCGGAGCTCTGGGTTGCGTATTCCCGGAGCTGTTGTCTCGCAACGGAGTGAAATTCGGGGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAAGGTGGGCTCGATTATTTGGGGAACCCGAGCCTAATCCACGCTCAGAGCATTTTAGCCATTTGGGCTTCTCAAGTTGTGCTAATGGGTGCGGTTGAGGGGTACAGAATTGCCGGCGGACCATTGGGGGAAATCACAGACCCAATTTACCCAGGTGGGAGCTTTGATCCATTGGGACTTGCTGATGATCCAGAGGCATTTGCAGAATTGAAAGTGAAGGAACTTAAGAATGGGAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGGCCCTTGGAGAATTTGGCTGATCATTTGGCTGACCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA

Coding sequence (CDS)

ATGGCTGCTTCCTCCATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACCACCTCCGACCTCCTCGGCGATGGCCGCATCACCATGAGAAAAACCGTCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACTTAGGCCCATTCTCTGGAGAGCCTCCTTCCTATTTGACTGGAGAATTCCCCGGCGACTACGGCTGGGACACTGCCGGTCTATCCGCCGACCCAGAAACCTTCGCGAAAAACCGTGAGCTAGAAGTCATCCACTCGAGATGGGCCATGCTCGGAGCTCTGGGTTGCGTATTCCCGGAGCTGTTGTCTCGCAACGGAGTGAAATTCGGGGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAAGGTGGGCTCGATTATTTGGGGAACCCGAGCCTAATCCACGCTCAGAGCATTTTAGCCATTTGGGCTTCTCAAGTTGTGCTAATGGGTGCGGTTGAGGGGTACAGAATTGCCGGCGGACCATTGGGGGAAATCACAGACCCAATTTACCCAGGTGGGAGCTTTGATCCATTGGGACTTGCTGATGATCCAGAGGCATTTGCAGAATTGAAAGTGAAGGAACTTAAGAATGGGAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGGCCCTTGGAGAATTTGGCTGATCATTTGGCTGACCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA

Protein sequence

MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of HG10001657 vs. NCBI nr
Match: XP_038901990.1 (chlorophyll a-b binding protein of LHCII type 1 [Benincasa hispida])

HSP 1 Score: 541.2 bits (1393), Expect = 5.1e-150
Identity = 262/267 (98.13%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPSLAGQAVKLSPT SDLLGDGRITMRKT GKPKPISSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGDGRITMRKTAGKPKPISSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. NCBI nr
Match: XP_008456347.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0054604.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK27568.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 540.4 bits (1391), Expect = 8.6e-150
Identity = 261/267 (97.75%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPSLAGQAVKLSPT SDLLG+GRITMRKT GKPKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. NCBI nr
Match: XP_004145734.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN46826.1 hypothetical protein Csa_020847 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPS AGQAVKLSPT SDLLG+GRITMRKT GKPKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. NCBI nr
Match: ABF17940.1 (putative chloroplast chlorophyll a/b-binding protein [Carya cathayensis])

HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-147
Identity = 251/267 (94.01%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSPSLAGQA+KL+P++SDLLG+GR+TMRKT G+PKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. NCBI nr
Match: XP_018852062.1 (chlorophyll a-b binding protein of LHCII type 1 [Juglans regia] >XP_040991577.1 chlorophyll a-b binding protein of LHCII type 1 [Juglans microcarpa x Juglans regia] >KAF5446359.1 hypothetical protein F2P56_031994 [Juglans regia])

HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-147
Identity = 251/267 (94.01%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSPSLAGQA+KL+P++SDLLG+GR+TMRKT G+P+P+SSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPRPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy Swiss-Prot
Match: P12333 (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 9.6e-144
Identity = 241/267 (90.26%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MA+S+MALSSPSLAG+AVKL PT S+++G+GRITMRKT GKPK + S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 4.8e-143
Identity = 240/267 (89.89%), Postives = 257/267 (96.25%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSPS AG+AVKLSP++S++ G+G++TMRKT  K K +SSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy Swiss-Prot
Match: P27491 (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-142
Identity = 239/267 (89.51%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           M AS+MALSSPS AG AVKLSP++S++ G+G+  MRKTV K KP+SSGSPWYGPDRVKYL
Sbjct: 1   MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           L+NL DHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LDNLVDHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy Swiss-Prot
Match: P04783 (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. OX=4104 GN=CAB91R PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.0e-142
Identity = 239/267 (89.51%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAA++MALSSPS AG+AVK SP++S++ G+G+ TMRKTV K KP+SSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 5.3e-142
Identity = 240/267 (89.89%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MA S+MALSS + AG+AVKLSP++S++ G+GR+TMRKT  K KP SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy TrEMBL
Match: A0A5D3DVR3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00410 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.2e-150
Identity = 261/267 (97.75%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPSLAGQAVKLSPT SDLLG+GRITMRKT GKPKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy TrEMBL
Match: A0A1S3C301 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496313 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.2e-150
Identity = 261/267 (97.75%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPSLAGQAVKLSPT SDLLG+GRITMRKT GKPKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy TrEMBL
Match: A0A0A0KGD7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G139750 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAASSMALSSPS AGQAVKLSPT SDLLG+GRITMRKT GKPKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy TrEMBL
Match: Q1KLZ3 (Chlorophyll a-b binding protein, chloroplastic OS=Carya cathayensis OX=139927 GN=ABC PE=2 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 8.7e-148
Identity = 251/267 (94.01%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSPSLAGQA+KL+P++SDLLG+GR+TMRKT G+PKP+SSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. ExPASy TrEMBL
Match: A0A2I4H7D3 (Chlorophyll a-b binding protein, chloroplastic OS=Juglans regia OX=51240 GN=LOC109014159 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 8.7e-148
Identity = 251/267 (94.01%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSPSLAGQA+KL+P++SDLLG+GR+TMRKT G+P+P+SSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPRPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of HG10001657 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-138
Identity = 237/268 (88.43%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSP+ AG+AVKLSP  S++LG GR+TMRKTV KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 268
           P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of HG10001657 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 486.9 bits (1252), Expect = 1.1e-137
Identity = 236/268 (88.06%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSP+ AG+AV LSP  S++LG GR+TMRKTV KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 268
           P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of HG10001657 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 486.9 bits (1252), Expect = 1.1e-137
Identity = 236/268 (88.06%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSP+ AG+AV LSP  S++LG GR+TMRKTV KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 268
           P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of HG10001657 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-137
Identity = 237/268 (88.43%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MA+S+MALSSP+ AG+AVK  P  SD+LG GR+TMRKTV KPK   SGSPWYG DRVKYL
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 268
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of HG10001657 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 481.5 bits (1238), Expect = 4.4e-136
Identity = 235/268 (87.69%), Postives = 249/268 (92.91%), Query Frame = 0


Query: 1   MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTVGKPKPISSGSPWYGPDRVKYL 60
           MAAS+MALSSP+L G+AVKLSP  S++ G GRITMRK      P  SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGP--SGSPWYGSDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 268
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 266

The following BLAST results are available for this feature:

BLAST of HG10001657 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901990.1	5.1e-150	98.13	chlorophyll a-b binding protein of LHCII type 1 [Benincasa hispida]	[more]
XP_008456347.1	8.6e-150	97.75	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]
XP_004145734.1	2.5e-149	97.38	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN46826...	[more]
ABF17940.1	1.8e-147	94.01	putative chloroplast chlorophyll a/b-binding protein [Carya cathayensis]	[more]
XP_018852062.1	1.8e-147	94.01	chlorophyll a-b binding protein of LHCII type 1 [Juglans regia] >XP_040991577.1 ...	[more]

BLAST of HG10001657 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12333	9.6e-144	90.26	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1...	[more]
P27495	4.8e-143	89.89	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27491	1.4e-142	89.51	Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum OX=4097 GN...	[more]
P04783	4.0e-142	89.51	Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. OX=4104 GN=CAB...	[more]
P07369	5.3e-142	89.89	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of HG10001657 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DVR3	4.2e-150	97.75	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C301	4.2e-150	97.75	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KGD7	1.2e-149	97.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
Q1KLZ3	8.7e-148	94.01	Chlorophyll a-b binding protein, chloroplastic OS=Carya cathayensis OX=139927 GN...	[more]
A0A2I4H7D3	8.7e-148	94.01	Chlorophyll a-b binding protein, chloroplastic OS=Juglans regia OX=51240 GN=LOC1...	[more]

BLAST of HG10001657 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29930.1	2.8e-138	88.43	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.1e-137	88.06	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.1e-137	88.06	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	3.1e-137	88.43	photosystem II light harvesting complex gene B1B2	[more]
AT2G34430.1	4.4e-136	87.69	light-harvesting chlorophyll-protein complex II subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..233 e-value: 2.6E-49 score: 167.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 58..260 e-value: 1.4E-90 score: 304.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..267
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 50..264
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001657.1	HG10001657.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding