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HG10001641 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCATTTCCTCATTTTTACTCTGACCTTCTTTATCCCAACAAAATTTCTGACCTTCAGAGCCTTTTAATGGCTTCTGGAGATACTGGAATGTGTGGCATTAGAAACAACAACAACAATATCAACTTTGCTCTTATGGAAGAAACTTTCGTTCCTTCCTTTCATCAAACAGTGTCACCCGAGCAGTCGTCGTCTGATACTCTCTCGCCCCTCCTAACAATGCAGTATCCTGACCTATATGGGCCAGTCTCCGATATGACCGTCCCGTCGTTGTCCGAGTTTAACATGGGTACATACGACATTCATAGCTTAATCAACAGTCAGCCACAAGTTCCTGGTACATGCAACTACGGCGAGGAGCTCTTAGGCTTTGTGCCTGAATTCAAGCCCCTCTACTGCGAAACCTGGGTAATTAACAACTAATACGTCTAGAAAATTCAAAAGCTTAAACTGATAAATTATGATGTTATATTATATTGTTCGTATTTATAACTCTTGTATACTTTTTGAGATTTAAAAATTAGGTAGGGAGTCAAATGTGTAATAGACGATTACGGTTAATTGAAAATTCGAACTTATGACTTCTTGGTCTGTTTTGGTATATATGTTAAAGAAAGTTGAAAATTTTTGGGATGCAGGGAAGTCAGAGTGGGTATGAAATGCATGGAGTGGAAGAGACAAATATTAAGGTGGCAAGTCGCTACTCGGAAGAAGAAAGGAAAGAAAGGATTGTCAGATATTTGAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGGTCCTAATAATTCTCCATTATTTTTCTAAAATAAATAAAGTCGCGTTTTGTAACCATTCGATTTTTTGTTTTTGAAAATTAAGCTTATAAGCACTACTTTCACCTATAAATTTCTTGTTTTGTTATTAACTTTTTGTTGCTGTTTTCAAAAACCAATCCAAAATTTGAAAACTAAAAAACGTATTAATTTTTAAAAATTTATTTTTGTTTTTGAAATTTGGCTAAGATTTCAACTCTCGTATTTAAGAAATATGCAAACCATTGTAAGAAATTGTGAGGAAATATACTCTTTTCTAAAAACTAAAATTTAAAAGCGAAATGATTACCAAACGAGACTTAACTAATCTCTTATATCTTTTCTCCTGATCTTAAATTAATTAACCCTCATGGTTAAATTATTTTTACAGTATGCATGTAGGAAAACCCTAGCAGATAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACACTGATCATGAAATCCCTCTCAAAACCAACCAATTATCTACCCCAACTCACAACCTAATTAAACAAAGAGATCAAATGGTAAAAATCTCATACCAATTTTTTACTGTTTAATAATTTCTATTTTCTTAACTATTTTTAAATTATCTTATGTATTTTGTTCATAAAGATTAGACCTTTATCAGATGGGTTGGCCAATTTCCTAATTACTTTATTATTATTATTCTTTTTTTGGACAGAACAAGGAAGAAGAAGAAAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA ATGGCTTCATTTCCTCATTTTTACTCTGACCTTCTTTATCCCAACAAAATTTCTGACCTTCAGAGCCTTTTAATGGCTTCTGGAGATACTGGAATGTGTGGCATTAGAAACAACAACAACAATATCAACTTTGCTCTTATGGAAGAAACTTTCGTTCCTTCCTTTCATCAAACAGTGTCACCCGAGCAGTCGTCGTCTGATACTCTCTCGCCCCTCCTAACAATGCAGTATCCTGACCTATATGGGCCAGTCTCCGATATGACCGTCCCGTCGTTGTCCGAGTTTAACATGGGTACATACGACATTCATAGCTTAATCAACAGTCAGCCACAAGTTCCTGGTACATGCAACTACGGCGAGGAGCTCTTAGGCTTTGTGCCTGAATTCAAGCCCCTCTACTGCGAAACCTGGGGAAGTCAGAGTGGGTATGAAATGCATGGAGTGGAAGAGACAAATATTAAGGTGGCAAGTCGCTACTCGGAAGAAGAAAGGAAAGAAAGGATTGTCAGATATTTGAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGTATGCATGTAGGAAAACCCTAGCAGATAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACACTGATCATGAAATCCCTCTCAAAACCAACCAATTATCTACCCCAACTCACAACCTAATTAAACAAAGAGATCAAATGAACAAGGAAGAAGAAGAAAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA ATGGCTTCATTTCCTCATTTTTACTCTGACCTTCTTTATCCCAACAAAATTTCTGACCTTCAGAGCCTTTTAATGGCTTCTGGAGATACTGGAATGTGTGGCATTAGAAACAACAACAACAATATCAACTTTGCTCTTATGGAAGAAACTTTCGTTCCTTCCTTTCATCAAACAGTGTCACCCGAGCAGTCGTCGTCTGATACTCTCTCGCCCCTCCTAACAATGCAGTATCCTGACCTATATGGGCCAGTCTCCGATATGACCGTCCCGTCGTTGTCCGAGTTTAACATGGGTACATACGACATTCATAGCTTAATCAACAGTCAGCCACAAGTTCCTGGTACATGCAACTACGGCGAGGAGCTCTTAGGCTTTGTGCCTGAATTCAAGCCCCTCTACTGCGAAACCTGGGGAAGTCAGAGTGGGTATGAAATGCATGGAGTGGAAGAGACAAATATTAAGGTGGCAAGTCGCTACTCGGAAGAAGAAAGGAAAGAAAGGATTGTCAGATATTTGAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGTATGCATGTAGGAAAACCCTAGCAGATAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACACTGATCATGAAATCCCTCTCAAAACCAACCAATTATCTACCCCAACTCACAACCTAATTAAACAAAGAGATCAAATGAACAAGGAAGAAGAAGAAAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA MASFPHFYSDLLYPNKISDLQSLLMASGDTGMCGIRNNNNNINFALMEETFVPSFHQTVSPEQSSSDTLSPLLTMQYPDLYGPVSDMTVPSLSEFNMGTYDIHSLINSQPQVPGTCNYGEELLGFVPEFKPLYCETWGSQSGYEMHGVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTDHEIPLKTNQLSTPTHNLIKQRDQMNKEEEESWLQELAASLMYLPYVTNYGV Homology
BLAST of HG10001641 vs. NCBI nr
Match: XP_038902616.1 (zinc finger protein CONSTANS-LIKE 1-like [Benincasa hispida]) HSP 1 Score: 468.4 bits (1204), Expect = 4.1e-128 Identity = 240/268 (89.55%), Postives = 249/268 (92.91%), Query Frame = 0
BLAST of HG10001641 vs. NCBI nr
Match: XP_004150045.2 (uncharacterized protein LOC101221095 [Cucumis sativus]) HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123 Identity = 229/270 (84.81%), Postives = 240/270 (88.89%), Query Frame = 0
BLAST of HG10001641 vs. NCBI nr
Match: KAE8646876.1 (hypothetical protein Csa_021098 [Cucumis sativus]) HSP 1 Score: 432.6 bits (1111), Expect = 2.5e-117 Identity = 220/260 (84.62%), Postives = 231/260 (88.85%), Query Frame = 0
BLAST of HG10001641 vs. NCBI nr
Match: XP_016901933.1 (PREDICTED: uncharacterized protein LOC103496299 [Cucumis melo]) HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109 Identity = 208/247 (84.21%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of HG10001641 vs. NCBI nr
Match: KAG6570585.1 (Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99 Identity = 202/270 (74.81%), Postives = 215/270 (79.63%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04 Identity = 22/63 (34.92%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy TrEMBL
Match: A0A0A0KGC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 8.7e-124 Identity = 229/270 (84.81%), Postives = 240/270 (88.89%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy TrEMBL
Match: A0A1S4E134 (uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109 Identity = 208/247 (84.21%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy TrEMBL
Match: A0A6J1FX75 (zinc finger protein CONSTANS-LIKE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448335 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 6.3e-98 Identity = 200/269 (74.35%), Postives = 213/269 (79.18%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy TrEMBL
Match: A0A6J1JCW3 (uncharacterized protein LOC111483882 OS=Cucurbita maxima OX=3661 GN=LOC111483882 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96 Identity = 201/268 (75.00%), Postives = 211/268 (78.73%), Query Frame = 0
BLAST of HG10001641 vs. ExPASy TrEMBL
Match: A0A6J1FUW6 (zinc finger protein CONSTANS-LIKE 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448335 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 3.6e-85 Identity = 179/245 (73.06%), Postives = 192/245 (78.37%), Query Frame = 0
BLAST of HG10001641 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 ) HSP 1 Score: 121.7 bits (304), Expect = 8.8e-28 Identity = 81/185 (43.78%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of HG10001641 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein ) HSP 1 Score: 83.2 bits (204), Expect = 3.5e-16 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of HG10001641 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-15 Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of HG10001641 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein ) HSP 1 Score: 79.3 bits (194), Expect = 5.0e-15 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of HG10001641 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein ) HSP 1 Score: 79.3 bits (194), Expect = 5.0e-15 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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