HG10001568 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001568
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr09: 18235194 .. 18239999 (+)
RNA-Seq Expression	HG10001568
Synteny	HG10001568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATGTTCAGCGGTGCTTCCGTTGGCCTTGACTTCGTCTTCCAAGGTATGTAAACCCACTTCCGCTTCATCTTCTTCCATTGAGCAACAGAGTGAAATCCATACAATCACGACTCAGAACTTTCGCTATAGTAGAGCTTCCCCTTCTGTTAGATGGCCCAACCTAAAATTAACCGAGACTTTTCAGTTACCGTCTCAAACCCATTTCAAGCCTCCTCCTCCTTCGCAGACCCCGGAGGTTTCTGTGAGAACCCAGAATTCTGAGATTAAGGATGGGAGTTATGTAGAAGATGAGTTAGAATCTTCGAGAATGGTGGGTGATGAAACTCAAGAGATTTTAGGGAGGCCTAGCAAGACGAGAGTGAAAAAGATGAACAAACTGGCACTCAAGAGAGCGAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAAAATTTTAGCATTGAAACAGGATGAATTTGTGGCTGATGTATTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGCTTCGTAGTGAAATGGGTGGGGCGTTCGAATTGGCACAGAGCTTTGGAGGTGTATGAATGGTTGAATTTGAGACATTGGTATTCACCCAATGCTCGGATGTTGGCTACCATCTTGGCAGTGCTTGGAAAGGCCAATCAAGAAACGTTGGCTGTAGAAATTTTCACAAGGTCTGAGCCTGCCATTGGCAATAACGTCCAAGTGTACAATGCTATGATGGGCGTATATGCGCGGAATGGTCGATTTGTTCTGGTTCAAGAGTTGCTTGATTTGATGAGTAAGAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTGATAAATGCACGTATGAAGTCAGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAGTCGGGTGTTAGACCCGATATAATTACGTATAATACTTTAATTAGTGCTTGTTCTCGTGAATCGAATCTTGAAGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGACTGGCCAGTAGGGCTGAGCAACTCTTTAAGGAACTAGAGTCCAAAGGGTTCTTTCCTGATGCAGTGACATATAATTCATTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAGATTTGTGAAGAAATGGTAAACAATGGATTTGGTAAAGATGAGATGACATACAATACGATTATCCACATGTATGGGAAACAGGAGCAACATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCTGATGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCTAGTAAAATAGAAGAAGCTGCAAACATAATGACTGAGATGTTGGATTCTGGAGTCAAGCCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCCGGGAAACCAGTAGAAGCCGAGAAGACATTTGATTGTATGCTTAGGTCTGGGATTAGACCTGATTATTTGGCGTACTCGGTCATGATCGATCTCTTTCTTAGGTTCAATGAGACAAAGAAGGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAGGAGAACAAATTGGATGACATTGACAAAGTAATAAGAGATATGCAAGAGCAATGTGGTATGAATCCTCAAGTTATTTCTTCAATTCTTATAAAGGGAGAATGCTATGGTCATGCTGCTACAATGTTGAGATTGGCCATTGACACTGGCTATGACCTAGACGATGAGAATTTATTATCTATTTTGAGTACATTTAGTTTGTCTGGCAGGCACTTGGAAGCATGTGAATTACTAGAATTTTTGAAGGAGAAGACTTCAAATTCCAACCAGCTGGTTATTGAATTGCTGATAGTTGTACTTTGTAAGACTAAGCAAATAGATGCTGCTCTAGTGGAATATGGCAATACGACTAGAGGGTTTGGTTCATATGGCACAGGTTCCTTAATGTATGAATGCTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATACAGCATCTCACGTTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACTTGTACCAAGTCATGATGCTTATGCACTGTAAAATAGGCTATCCTGAAATAGCTCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAGTAGATGATGTCTCTACTTATGTTGAAATTATTGACGCATATGGGGAACTAAAACTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACGTGAGGCTAAAACTAGCTACCGTTGATAGGAAGATTTGGAATGCGTTAATACAAGCTTACGCCAAAAGTGGTTGCTACGAACGGGCACGGGCTGTTTTTAATACCATGATGCGCGATGGTCCTTCTCCCACAGTGATTTCCATTAATGGTTTATTGCAAGCATTAATTGCTGATAATCGATTGAAGGAGCTTTATGTTGTAGTCCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGGGATGGAAACATATTTGAGGTGAAGAAAATTTATCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGCCTTGTTATGCAAGGGAAAACGAGTTAGGGATGTCGAGGCAATGCTATCAGAAATGGAGGAGTCTGGATTTAAACCTGATCTGTCCGTATTGAATTCTGTCATCAAGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAGTGTACCATTTAATACTAGAAACTGGACTGACACCAGATGAGGATACTTATAACTCTTTAATTATAATGTATTGTAGAGATTGTAGACCGGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTTTTGGACACCTATAAAAGTCTGATTTCTGCACTATCTAAAAGACAGCTAGTTGAAGAGGCAGAGGAGCTTTTTGATGAGTTGAGAGCAAGTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAGATGTTTAGAAATACAGGAAATCATTTGAAAGCGGAGCGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCAACTGGCATGAACCTTGATACATTACCATATAGTTCAGTAATTGATGGCTATCTCAGAAACAGAGATTACAGTGGTGGAATCCAGAAACTGATGGCAATGAAGGTAGATGGTATAGAGCCTGATTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCGGAAAGTACAAGTGAAGCCATCATCATTTTAAATGCATTACGAGATACAGGATTCGATCTTCCAATCAGGTACTCAATAAAATTTCTAGTGTTAAAGCAAGACAATGTTTCAAATCTCTTTTAATATGATGCTGTCAAGTATTTCTCGTAAACAGGCATTTCAAGGTTAGCTTCTCTTGTAGGCTATTAACACAAAAATCGGGGTCGCTGATCCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTTGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTCCAGTTGGCAATCAAGAGAAGTATATACCGACAGGATATATTCAGGTAATACTAATTTGTTCCAGTTTTTTGTCTATCACATTTATTATGCCTACCATTAGGAAAGGTGGTGTGCACATATAATTATGGGACAGAAAGGAGATTTTCATGGTTCGTCCCAACATTTTTATGTCCTTGTGTGGTAAAACCTCGCAACTGTGAAATACCATTGATTTATTAACAAGTATAACATCTATTAATGCCTTGGAGTGCATTCATCATCAAAAGGTTGTGAATCGTCATGGAAAAACAATTGAGGTTCACACTTCAATGATGTGAAATGATGCTGCCACCTCTTTGACTAGCAGATCTTATCAAACTGCATGACCCCTATGGTCGAGCCAAGTGGGCTGAGTGATTTGAGGCAGCCTGCTGTTGGTGGTGGTTTGTGGTGGCTACCCTGCAAAGATGGATGGATTCTAAGAATTTATATTACTACCAAGCCTTTTTCTACTATGTATAACTAGTTATCCATTTGTTCCAAGATTTGGAAAAGTGTCATTATGTCTATGGATTGAGACTTTTGCACTCTGGTTGGCTTTTTTGCTTGGTAGTCAATGTCCCTTCCCGGGTTGGAGCTACGATGTCATGTGGTGACTTTGGGGTCACTAACCCAATCGTGGGTGACCATGTTGTATAGATGAACGGATTTAAACTCTTACTTTGTTTTGAGTTTTTAGCCTTATTGTTGCCATATTATGAGATTGTGATAATTTGTTTGTTGCTTATATAGTTAAAGTTATATGTTACTTATGTTACTTTCTCATCTGCTAGTCTAATAATGCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTCCTATGTTGTGGCAAATGATTTCCACTTTAAGCTACCTCTACGATGATTGA

mRNA sequence

ATGGCATGTTCAGCGGTGCTTCCGTTGGCCTTGACTTCGTCTTCCAAGGTATGTAAACCCACTTCCGCTTCATCTTCTTCCATTGAGCAACAGAGTGAAATCCATACAATCACGACTCAGAACTTTCGCTATAGTAGAGCTTCCCCTTCTGTTAGATGGCCCAACCTAAAATTAACCGAGACTTTTCAGTTACCGTCTCAAACCCATTTCAAGCCTCCTCCTCCTTCGCAGACCCCGGAGGTTTCTGTGAGAACCCAGAATTCTGAGATTAAGGATGGGAGTTATGTAGAAGATGAGTTAGAATCTTCGAGAATGGTGGGTGATGAAACTCAAGAGATTTTAGGGAGGCCTAGCAAGACGAGAGTGAAAAAGATGAACAAACTGGCACTCAAGAGAGCGAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAAAATTTTAGCATTGAAACAGGATGAATTTGTGGCTGATGTATTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGCTTCGTAGTGAAATGGGTGGGGCGTTCGAATTGGCACAGAGCTTTGGAGGTGTATGAATGGTTGAATTTGAGACATTGGTATTCACCCAATGCTCGGATGTTGGCTACCATCTTGGCAGTGCTTGGAAAGGCCAATCAAGAAACGTTGGCTGTAGAAATTTTCACAAGGTCTGAGCCTGCCATTGGCAATAACGTCCAAGTGTACAATGCTATGATGGGCGTATATGCGCGGAATGGTCGATTTGTTCTGGTTCAAGAGTTGCTTGATTTGATGAGTAAGAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTGATAAATGCACGTATGAAGTCAGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAGTCGGGTGTTAGACCCGATATAATTACGTATAATACTTTAATTAGTGCTTGTTCTCGTGAATCGAATCTTGAAGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGACTGGCCAGTAGGGCTGAGCAACTCTTTAAGGAACTAGAGTCCAAAGGGTTCTTTCCTGATGCAGTGACATATAATTCATTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAGATTTGTGAAGAAATGGTAAACAATGGATTTGGTAAAGATGAGATGACATACAATACGATTATCCACATGTATGGGAAACAGGAGCAACATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCTGATGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCTAGTAAAATAGAAGAAGCTGCAAACATAATGACTGAGATGTTGGATTCTGGAGTCAAGCCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCCGGGAAACCAGTAGAAGCCGAGAAGACATTTGATTGTATGCTTAGGTCTGGGATTAGACCTGATTATTTGGCGTACTCGGTCATGATCGATCTCTTTCTTAGGTTCAATGAGACAAAGAAGGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAGGAGAACAAATTGGATGACATTGACAAAGTAATAAGAGATATGCAAGAGCAATGTGGTATGAATCCTCAAGTTATTTCTTCAATTCTTATAAAGGGAGAATGCTATGGTCATGCTGCTACAATGTTGAGATTGGCCATTGACACTGGCTATGACCTAGACGATGAGAATTTATTATCTATTTTGAGTACATTTAGTTTGTCTGGCAGGCACTTGGAAGCATGTGAATTACTAGAATTTTTGAAGGAGAAGACTTCAAATTCCAACCAGCTGGTTATTGAATTGCTGATAGTTGTACTTTGTAAGACTAAGCAAATAGATGCTGCTCTAGTGGAATATGGCAATACGACTAGAGGGTTTGGTTCATATGGCACAGGTTCCTTAATGTATGAATGCTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATACAGCATCTCACGTTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACTTGTACCAAGTCATGATGCTTATGCACTGTAAAATAGGCTATCCTGAAATAGCTCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAGTAGATGATGTCTCTACTTATGTTGAAATTATTGACGCATATGGGGAACTAAAACTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACGTGAGGCTAAAACTAGCTACCGTTGATAGGAAGATTTGGAATGCGTTAATACAAGCTTACGCCAAAAGTGGTTGCTACGAACGGGCACGGGCTGTTTTTAATACCATGATGCGCGATGGTCCTTCTCCCACAGTGATTTCCATTAATGGTTTATTGCAAGCATTAATTGCTGATAATCGATTGAAGGAGCTTTATGTTGTAGTCCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGGGATGGAAACATATTTGAGGTGAAGAAAATTTATCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGCCTTGTTATGCAAGGGAAAACGAGTTAGGGATGTCGAGGCAATGCTATCAGAAATGGAGGAGTCTGGATTTAAACCTGATCTGTCCGTATTGAATTCTGTCATCAAGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAGTGTACCATTTAATACTAGAAACTGGACTGACACCAGATGAGGATACTTATAACTCTTTAATTATAATGTATTGTAGAGATTGTAGACCGGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTTTTGGACACCTATAAAAGTCTGATTTCTGCACTATCTAAAAGACAGCTAGTTGAAGAGGCAGAGGAGCTTTTTGATGAGTTGAGAGCAAGTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAGATGTTTAGAAATACAGGAAATCATTTGAAAGCGGAGCGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCAACTGGCATGAACCTTGATACATTACCATATAGTTCAGTAATTGATGGCTATCTCAGAAACAGAGATTACAGTGGTGGAATCCAGAAACTGATGGCAATGAAGGTAGATGGTATAGAGCCTGATTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCGGAAAGTACAAGTGAAGCCATCATCATTTTAAATGCATTACGAGATACAGGATTCGATCTTCCAATCAGGCATTTCAAGGTTAGCTTCTCTTGTAGGCTATTAACACAAAAATCGGGGTCGCTGATCCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTTGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTCCAGTTGGCAATCAAGAGAAGTATATACCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTCCTATGTTGTGGCAAATGATTTCCACTTTAAGCTACCTCTACGATGATTGA

Coding sequence (CDS)

ATGGCATGTTCAGCGGTGCTTCCGTTGGCCTTGACTTCGTCTTCCAAGGTATGTAAACCCACTTCCGCTTCATCTTCTTCCATTGAGCAACAGAGTGAAATCCATACAATCACGACTCAGAACTTTCGCTATAGTAGAGCTTCCCCTTCTGTTAGATGGCCCAACCTAAAATTAACCGAGACTTTTCAGTTACCGTCTCAAACCCATTTCAAGCCTCCTCCTCCTTCGCAGACCCCGGAGGTTTCTGTGAGAACCCAGAATTCTGAGATTAAGGATGGGAGTTATGTAGAAGATGAGTTAGAATCTTCGAGAATGGTGGGTGATGAAACTCAAGAGATTTTAGGGAGGCCTAGCAAGACGAGAGTGAAAAAGATGAACAAACTGGCACTCAAGAGAGCGAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAAAATTTTAGCATTGAAACAGGATGAATTTGTGGCTGATGTATTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGCTTCGTAGTGAAATGGGTGGGGCGTTCGAATTGGCACAGAGCTTTGGAGGTGTATGAATGGTTGAATTTGAGACATTGGTATTCACCCAATGCTCGGATGTTGGCTACCATCTTGGCAGTGCTTGGAAAGGCCAATCAAGAAACGTTGGCTGTAGAAATTTTCACAAGGTCTGAGCCTGCCATTGGCAATAACGTCCAAGTGTACAATGCTATGATGGGCGTATATGCGCGGAATGGTCGATTTGTTCTGGTTCAAGAGTTGCTTGATTTGATGAGTAAGAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTGATAAATGCACGTATGAAGTCAGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAGTCGGGTGTTAGACCCGATATAATTACGTATAATACTTTAATTAGTGCTTGTTCTCGTGAATCGAATCTTGAAGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGACTGGCCAGTAGGGCTGAGCAACTCTTTAAGGAACTAGAGTCCAAAGGGTTCTTTCCTGATGCAGTGACATATAATTCATTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAGATTTGTGAAGAAATGGTAAACAATGGATTTGGTAAAGATGAGATGACATACAATACGATTATCCACATGTATGGGAAACAGGAGCAACATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCTGATGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCTAGTAAAATAGAAGAAGCTGCAAACATAATGACTGAGATGTTGGATTCTGGAGTCAAGCCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCCGGGAAACCAGTAGAAGCCGAGAAGACATTTGATTGTATGCTTAGGTCTGGGATTAGACCTGATTATTTGGCGTACTCGGTCATGATCGATCTCTTTCTTAGGTTCAATGAGACAAAGAAGGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAGGAGAACAAATTGGATGACATTGACAAAGTAATAAGAGATATGCAAGAGCAATGTGGTATGAATCCTCAAGTTATTTCTTCAATTCTTATAAAGGGAGAATGCTATGGTCATGCTGCTACAATGTTGAGATTGGCCATTGACACTGGCTATGACCTAGACGATGAGAATTTATTATCTATTTTGAGTACATTTAGTTTGTCTGGCAGGCACTTGGAAGCATGTGAATTACTAGAATTTTTGAAGGAGAAGACTTCAAATTCCAACCAGCTGGTTATTGAATTGCTGATAGTTGTACTTTGTAAGACTAAGCAAATAGATGCTGCTCTAGTGGAATATGGCAATACGACTAGAGGGTTTGGTTCATATGGCACAGGTTCCTTAATGTATGAATGCTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATACAGCATCTCACGTTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACTTGTACCAAGTCATGATGCTTATGCACTGTAAAATAGGCTATCCTGAAATAGCTCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAGTAGATGATGTCTCTACTTATGTTGAAATTATTGACGCATATGGGGAACTAAAACTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACGTGAGGCTAAAACTAGCTACCGTTGATAGGAAGATTTGGAATGCGTTAATACAAGCTTACGCCAAAAGTGGTTGCTACGAACGGGCACGGGCTGTTTTTAATACCATGATGCGCGATGGTCCTTCTCCCACAGTGATTTCCATTAATGGTTTATTGCAAGCATTAATTGCTGATAATCGATTGAAGGAGCTTTATGTTGTAGTCCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGGGATGGAAACATATTTGAGGTGAAGAAAATTTATCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGCCTTGTTATGCAAGGGAAAACGAGTTAGGGATGTCGAGGCAATGCTATCAGAAATGGAGGAGTCTGGATTTAAACCTGATCTGTCCGTATTGAATTCTGTCATCAAGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAGTGTACCATTTAATACTAGAAACTGGACTGACACCAGATGAGGATACTTATAACTCTTTAATTATAATGTATTGTAGAGATTGTAGACCGGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTTTTGGACACCTATAAAAGTCTGATTTCTGCACTATCTAAAAGACAGCTAGTTGAAGAGGCAGAGGAGCTTTTTGATGAGTTGAGAGCAAGTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAGATGTTTAGAAATACAGGAAATCATTTGAAAGCGGAGCGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCAACTGGCATGAACCTTGATACATTACCATATAGTTCAGTAATTGATGGCTATCTCAGAAACAGAGATTACAGTGGTGGAATCCAGAAACTGATGGCAATGAAGGTAGATGGTATAGAGCCTGATTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCGGAAAGTACAAGTGAAGCCATCATCATTTTAAATGCATTACGAGATACAGGATTCGATCTTCCAATCAGGCATTTCAAGGTTAGCTTCTCTTGTAGGCTATTAACACAAAAATCGGGGTCGCTGATCCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTTGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTCCAGTTGGCAATCAAGAGAAGTATATACCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTCCTATGTTGTGGCAAATGATTTCCACTTTAAGCTACCTCTACGATGATTGA

Protein sequence

MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTETFQLPSQTHFKPPPPSQTPEVSVRTQNSEIKDGSYVEDELESSRMVGDETQEILGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAIGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISSILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSCRLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFPMLWQMISTLSYLYDD

Homology

[Close]

BLAST of HG10001568 vs. NCBI nr
Match: XP_038901451.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901452.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901453.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901454.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 2410.2 bits (6245), Expect = 0.0e+00
Identity = 1220/1301 (93.77%), Postives = 1254/1301 (96.39%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSA-SSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLT 60
            MACSAVLPLA+ SSSKVCKPTSA SSSSIEQQSEIH  TTQNFRYSRASPSVRWPNLKLT
Sbjct: 1    MACSAVLPLAVASSSKVCKPTSASSSSSIEQQSEIHANTTQNFRYSRASPSVRWPNLKLT 60

Query: 61   ETFQLPSQTHFKPPPPSQT-----PEVSVRTQNSEIKDGSYVEDELESSRMVGDETQEIL 120
            E+FQLPSQTHF  P PSQT      EVS+RTQNSEI+DGSYVEDE ESSRMVGDET+E+L
Sbjct: 61   ESFQLPSQTHFTAPSPSQTHMVDESEVSLRTQNSEIRDGSYVEDESESSRMVGDETREVL 120

Query: 121  GRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCF 180
            GRP+KTRVKKMNKLALKRAKDWRERVQFLTD+ILALKQDEFVADVLDDRKVQMTPTDFCF
Sbjct: 121  GRPNKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCF 180

Query: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAI 240
            VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSEPAI
Sbjct: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAI 240

Query: 241  GNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLS 300
            GN VQVYNAMMGVYARNGRF+LVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNLS
Sbjct: 241  GNTVQVYNAMMGVYARNGRFILVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNLS 300

Query: 301  LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360
            LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV
Sbjct: 301  LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360

Query: 361  YGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKD 420
            YGRCGLA++AEQLFKELESKGFFPDAVTYNSLLYAFAREGNV+KVKEICEEMV+NGFGKD
Sbjct: 361  YGRCGLANKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVKKVKEICEEMVSNGFGKD 420

Query: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMT 480
            EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSS+IEEAANIMT
Sbjct: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSRIEEAANIMT 480

Query: 481  EMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540
            EMLDSGVKPTL+TYSALICGYGKAGKPVEAE TFDCMLRSGIRPDYLAYSVMIDLFLRFN
Sbjct: 481  EMLDSGVKPTLKTYSALICGYGKAGKPVEAETTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540

Query: 541  ETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS 600
            ETKKAMLLYKEMVRDGL PDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS
Sbjct: 541  ETKKAMLLYKEMVRDGLIPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS 600

Query: 601  ILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNS 660
            IL+KGECYGHA+TMLRLAIDTG +LDDENLLSILST+SLSGRHLEACELLEFLKEKTSNS
Sbjct: 601  ILLKGECYGHASTMLRLAIDTGCELDDENLLSILSTYSLSGRHLEACELLEFLKEKTSNS 660

Query: 661  NQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTASH 720
            NQLV+E LIVVLCK KQIDAALVEYGNTTRGFGS+GT SLMYECLIQGCQEKELF TASH
Sbjct: 661  NQLVVESLIVVLCKAKQIDAALVEYGNTTRGFGSHGTSSLMYECLIQGCQEKELFHTASH 720

Query: 721  VFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDAY 780
            +FSDMMF GVKISENLYQVMM MHCKIGYP+ AHYLLERAELEGVVVDDVSTYVEIIDAY
Sbjct: 721  IFSDMMFCGVKISENLYQVMMHMHCKIGYPDTAHYLLERAELEGVVVDDVSTYVEIIDAY 780

Query: 781  GELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840
            GELKLWQKAESLVGN RLKLA +DRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV
Sbjct: 781  GELKLWQKAESLVGNARLKLAIIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840

Query: 841  ISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHG 900
            ISINGLLQALIADNRLKELY VVQELQDMGFKISKSSVLLMLDAF+RDGNIFEVKKIYHG
Sbjct: 841  ISINGLLQALIADNRLKELYAVVQELQDMGFKISKSSVLLMLDAFSRDGNIFEVKKIYHG 900

Query: 901  MKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVED 960
            MKAAGYLPTMHLYRSM+ALLCKGKRVRDVEA+LSEMEE+GFKPDLS+LNSVIKLYVGVED
Sbjct: 901  MKAAGYLPTMHLYRSMVALLCKGKRVRDVEAILSEMEEAGFKPDLSILNSVIKLYVGVED 960

Query: 961  FRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020
            FRNASRVYHLILETGLTPDEDTYNSLI MYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS
Sbjct: 961  FRNASRVYHLILETGLTPDEDTYNSLITMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020

Query: 1021 LISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG 1080
            LISALSK+QLVEEAEELF+ELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG
Sbjct: 1021 LISALSKKQLVEEAEELFEELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG 1080

Query: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGGI 1140
            IDPTVATMHLLMVSYGSSGHPKEAEKV NDLKATGMNLDTLPYSSVID YLRN+DYSGGI
Sbjct: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVFNDLKATGMNLDTLPYSSVIDAYLRNKDYSGGI 1140

Query: 1141 QKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSCR 1200
            QKLMAMK DGIEPDYRIWTCFIRAASLSESTSEAIIIL ALRDTGFDLPI         R
Sbjct: 1141 QKLMAMKADGIEPDYRIWTCFIRAASLSESTSEAIIILTALRDTGFDLPI---------R 1200

Query: 1201 LLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRS 1260
            LLTQKSGSLILEVDQFLEKLG LEDDDA FNFVNALEDLLWAFELRATASWVFQLAIKRS
Sbjct: 1201 LLTQKSGSLILEVDQFLEKLGVLEDDDATFNFVNALEDLLWAFELRATASWVFQLAIKRS 1260

Query: 1261 IYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            IYR+DIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 IYRKDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1292

[Close]

BLAST of HG10001568 vs. NCBI nr
Match: TYK07589.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 2409.4 bits (6243), Expect = 0.0e+00
Identity = 1225/1318 (92.94%), Postives = 1258/1318 (95.45%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA TSSSKVCKPTS+SSSSIEQ  EIHT T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPS------QTPEVSVRTQNSEIKDGSYV-EDELESSRMVGDETQEI 120
            +FQLPSQTHF  PPPS         EVS RTQ SEI+DGS V EDELESSRMV DETQE+
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGN VQVYNAMMGVYARNGRFVLVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRAEQLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSKIEEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVIS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKV+RDMQE+CGMNPQ IS
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSN 660
            S+LIKGECYGHAA MLR+AI+TGYDLD+ENLLSILST+SLSGRHLEACELLEFLKEKTSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTAS 720
            SNQLV E LIVVLCKTKQIDAALVEYGN  R FGSYGT SLMYECLIQGCQEKELFDTAS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDA 780
            H+FSDMMFYGVKIS+ LYQVM+LM+CK GYPEIAHYLLERAELEG+VVDDVSTYVEIID+
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA VDRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVE 960
            GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEE+GFKPDL +LNSVIKLYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKES 1080
            SLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVMMKES
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRNRDYSGG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSC 1200
            IQKLMAMK DGIEPDYRIWTCFIRAASLSES+SEAIIILNAL+DTGFDLPI         
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPI--------- 1200

Query: 1201 RLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260
            RLLTQKSG+LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR
Sbjct: 1201 RLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260

Query: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFPMLWQMISTLSYLYD 1312
            SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSF M WQ+ISTLSYLYD
Sbjct: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTMPWQIISTLSYLYD 1309

[Close]

BLAST of HG10001568 vs. NCBI nr
Match: XP_008463825.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo] >XP_008463826.1 PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo] >XP_008463827.1 PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo] >KAA0059944.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 2380.5 bits (6168), Expect = 0.0e+00
Identity = 1210/1302 (92.93%), Postives = 1243/1302 (95.47%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA TSSSKVCKPTS+SSSSIEQ  EIHT T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPS------QTPEVSVRTQNSEIKDGSYV-EDELESSRMVGDETQEI 120
            +FQLPSQTHF  PPPS         EVS RTQ SEI+DGS V EDELESSRMV DETQE+
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGN VQVYNAMMGVYARNGRFVLVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRAEQLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSKIEEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVIS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKV+RDMQE+CGMNPQ IS
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSN 660
            S+LIKGECYGHAA MLR+AI+TGYDLD+ENLLSILST+SLSGRHLEACELLEFLKEKTSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTAS 720
            SNQLV E LIVVLCKTKQIDAALVEYGN  R FGSYGT SLMYECLIQGCQEKELFDTAS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDA 780
            H+FSDMMFYGVKIS+ LYQVM+LM+CK GYPEIAHYLLERAELEG+VVDDVSTYVEIID+
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA VDRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVE 960
            GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEE+GFKPDL +LNSVIKLYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKES 1080
            SLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVMMKES
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRNRDYSGG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSC 1200
            IQKLMAMK DGIEPDYRIWTCFIRAASLSES+SEAIIILNAL+DTGFDLPI         
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPI--------- 1200

Query: 1201 RLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260
            RLLTQKSG+LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR
Sbjct: 1201 RLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260

Query: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1293

[Close]

BLAST of HG10001568 vs. NCBI nr
Match: XP_038901455.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 2345.9 bits (6078), Expect = 0.0e+00
Identity = 1188/1267 (93.76%), Postives = 1221/1267 (96.37%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSA-SSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLT 60
            MACSAVLPLA+ SSSKVCKPTSA SSSSIEQQSEIH  TTQNFRYSRASPSVRWPNLKLT
Sbjct: 1    MACSAVLPLAVASSSKVCKPTSASSSSSIEQQSEIHANTTQNFRYSRASPSVRWPNLKLT 60

Query: 61   ETFQLPSQTHFKPPPPSQT-----PEVSVRTQNSEIKDGSYVEDELESSRMVGDETQEIL 120
            E+FQLPSQTHF  P PSQT      EVS+RTQNSEI+DGSYVEDE ESSRMVGDET+E+L
Sbjct: 61   ESFQLPSQTHFTAPSPSQTHMVDESEVSLRTQNSEIRDGSYVEDESESSRMVGDETREVL 120

Query: 121  GRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCF 180
            GRP+KTRVKKMNKLALKRAKDWRERVQFLTD+ILALKQDEFVADVLDDRKVQMTPTDFCF
Sbjct: 121  GRPNKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCF 180

Query: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAI 240
            VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSEPAI
Sbjct: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAI 240

Query: 241  GNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLS 300
            GN VQVYNAMMGVYARNGRF+LVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNLS
Sbjct: 241  GNTVQVYNAMMGVYARNGRFILVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNLS 300

Query: 301  LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360
            LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV
Sbjct: 301  LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360

Query: 361  YGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKD 420
            YGRCGLA++AEQLFKELESKGFFPDAVTYNSLLYAFAREGNV+KVKEICEEMV+NGFGKD
Sbjct: 361  YGRCGLANKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVKKVKEICEEMVSNGFGKD 420

Query: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMT 480
            EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSS+IEEAANIMT
Sbjct: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSRIEEAANIMT 480

Query: 481  EMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540
            EMLDSGVKPTL+TYSALICGYGKAGKPVEAE TFDCMLRSGIRPDYLAYSVMIDLFLRFN
Sbjct: 481  EMLDSGVKPTLKTYSALICGYGKAGKPVEAETTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540

Query: 541  ETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS 600
            ETKKAMLLYKEMVRDGL PDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS
Sbjct: 541  ETKKAMLLYKEMVRDGLIPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS 600

Query: 601  ILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNS 660
            IL+KGECYGHA+TMLRLAIDTG +LDDENLLSILST+SLSGRHLEACELLEFLKEKTSNS
Sbjct: 601  ILLKGECYGHASTMLRLAIDTGCELDDENLLSILSTYSLSGRHLEACELLEFLKEKTSNS 660

Query: 661  NQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTASH 720
            NQLV+E LIVVLCK KQIDAALVEYGNTTRGFGS+GT SLMYECLIQGCQEKELF TASH
Sbjct: 661  NQLVVESLIVVLCKAKQIDAALVEYGNTTRGFGSHGTSSLMYECLIQGCQEKELFHTASH 720

Query: 721  VFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDAY 780
            +FSDMMF GVKISENLYQVMM MHCKIGYP+ AHYLLERAELEGVVVDDVSTYVEIIDAY
Sbjct: 721  IFSDMMFCGVKISENLYQVMMHMHCKIGYPDTAHYLLERAELEGVVVDDVSTYVEIIDAY 780

Query: 781  GELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840
            GELKLWQKAESLVGN RLKLA +DRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV
Sbjct: 781  GELKLWQKAESLVGNARLKLAIIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840

Query: 841  ISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHG 900
            ISINGLLQALIADNRLKELY VVQELQDMGFKISKSSVLLMLDAF+RDGNIFEVKKIYHG
Sbjct: 841  ISINGLLQALIADNRLKELYAVVQELQDMGFKISKSSVLLMLDAFSRDGNIFEVKKIYHG 900

Query: 901  MKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVED 960
            MKAAGYLPTMHLYRSM+ALLCKGKRVRDVEA+LSEMEE+GFKPDLS+LNSVIKLYVGVED
Sbjct: 901  MKAAGYLPTMHLYRSMVALLCKGKRVRDVEAILSEMEEAGFKPDLSILNSVIKLYVGVED 960

Query: 961  FRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020
            FRNASRVYHLILETGLTPDEDTYNSLI MYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS
Sbjct: 961  FRNASRVYHLILETGLTPDEDTYNSLITMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020

Query: 1021 LISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG 1080
            LISALSK+QLVEEAEELF+ELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG
Sbjct: 1021 LISALSKKQLVEEAEELFEELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG 1080

Query: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGGI 1140
            IDPTVATMHLLMVSYGSSGHPKEAEKV NDLKATGMNLDTLPYSSVID YLRN+DYSGGI
Sbjct: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVFNDLKATGMNLDTLPYSSVIDAYLRNKDYSGGI 1140

Query: 1141 QKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSCR 1200
            QKLMAMK DGIEPDYRIWTCFIRAASLSESTSEAIIIL ALRDTGFDLPI         R
Sbjct: 1141 QKLMAMKADGIEPDYRIWTCFIRAASLSESTSEAIIILTALRDTGFDLPI---------R 1200

Query: 1201 LLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRS 1260
            LLTQKSGSLILEVDQFLEKLG LEDDDA FNFVNALEDLLWAFELRATASWVFQLAIKRS
Sbjct: 1201 LLTQKSGSLILEVDQFLEKLGVLEDDDATFNFVNALEDLLWAFELRATASWVFQLAIKRS 1258

Query: 1261 IYRQDIF 1262
            IYR+DIF
Sbjct: 1261 IYRKDIF 1258

[Close]

BLAST of HG10001568 vs. NCBI nr
Match: XP_011657187.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Cucumis sativus] >XP_011657188.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Cucumis sativus] >KAE8647009.1 hypothetical protein Csa_017044 [Cucumis sativus])

HSP 1 Score: 2335.1 bits (6050), Expect = 0.0e+00
Identity = 1197/1306 (91.65%), Postives = 1233/1306 (94.41%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MA SAVLPLA TSSSKVCKPTS SSSSIEQ  EI+T T+Q FRYSRASPSVRWPNLKL E
Sbjct: 1    MAYSAVLPLAFTSSSKVCKPTS-SSSSIEQHIEIYTNTSQKFRYSRASPSVRWPNLKLNE 60

Query: 61   TFQLPSQTHF-----KPPPPSQT-----PEVSVRTQNSEIKDGSYV-EDELESSRMVGDE 120
            +FQLPSQTHF      PPPPSQT      EVS+RTQ SEI+DGSYV EDE ESSRMV DE
Sbjct: 61   SFQLPSQTHFTAPPPPPPPPSQTHMVDESEVSLRTQTSEIRDGSYVEEDESESSRMVSDE 120

Query: 121  TQEILGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTP 180
            TQE+LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK D+FVADVLDDRKVQMTP
Sbjct: 121  TQEVLGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKHDQFVADVLDDRKVQMTP 180

Query: 181  TDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTR 240
            TDFCFVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIF R
Sbjct: 181  TDFCFVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEKLAVEIFKR 240

Query: 241  SEPAIGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPM 300
            SE AI N VQVYNAMMGVYARNGRFVLVQ+LLDLM KRGCEPDLVSFNTLINARMKSGPM
Sbjct: 241  SESAIDNTVQVYNAMMGVYARNGRFVLVQKLLDLMRKRGCEPDLVSFNTLINARMKSGPM 300

Query: 301  TPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYN 360
            TPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYN
Sbjct: 301  TPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYN 360

Query: 361  AMISVYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNN 420
            AMISVYGRCGLASRAEQLF ELESKGFFPDAVTYNSLL+AFA+EGNVEKVKEICEEMV N
Sbjct: 361  AMISVYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLFAFAKEGNVEKVKEICEEMVRN 420

Query: 421  GFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEA 480
            GFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYT+LIDSLGKSSKIEEA
Sbjct: 421  GFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTILIDSLGKSSKIEEA 480

Query: 481  ANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDL 540
            ANIMTEMLDSGVKPTLRTYSALICGYGK GKPVEAEKTFDCM RSGIRPDYLAYSVMIDL
Sbjct: 481  ANIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKTFDCMRRSGIRPDYLAYSVMIDL 540

Query: 541  FLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNP 600
            FLRFNETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKVIRDM+++ GMNP
Sbjct: 541  FLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMRDEYGMNP 600

Query: 601  QVISSILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKE 660
            QVISSILIKGECYGHAATMLR+ IDTGYDLD+ENLLSILS +SLSGR+LEACELLEFLKE
Sbjct: 601  QVISSILIKGECYGHAATMLRVTIDTGYDLDNENLLSILSAYSLSGRYLEACELLEFLKE 660

Query: 661  KTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELF 720
            KTSNSNQLV E LIVVLCKTKQIDAALVEYGN  + FGSYGT SLMYECLI GCQEKELF
Sbjct: 661  KTSNSNQLVTESLIVVLCKTKQIDAALVEYGNMKKVFGSYGTSSLMYECLIHGCQEKELF 720

Query: 721  DTASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVE 780
            DTASH+FSDMMFY VKIS+NLYQVM+ M+CK GYPEIAHYLLERAELEGVVVDDVSTYVE
Sbjct: 721  DTASHIFSDMMFYVVKISDNLYQVMIRMYCKRGYPEIAHYLLERAELEGVVVDDVSTYVE 780

Query: 781  IIDAYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDG 840
            IID++GELKLWQKAESLVGN RLKLA VDRKIWNALIQAYAKSGCYERARAVFNTMMRDG
Sbjct: 781  IIDSFGELKLWQKAESLVGNKRLKLAAVDRKIWNALIQAYAKSGCYERARAVFNTMMRDG 840

Query: 841  PSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVK 900
            PSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVK
Sbjct: 841  PSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVK 900

Query: 901  KIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLY 960
            KIYHGM AAGYLPTMHLYRSMI LLCKGKRVRDVEAMLSEMEE+GF+PDLS+LNSVIKLY
Sbjct: 901  KIYHGMIAAGYLPTMHLYRSMIELLCKGKRVRDVEAMLSEMEETGFRPDLSILNSVIKLY 960

Query: 961  VGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVL 1020
            VGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVL
Sbjct: 961  VGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVL 1020

Query: 1021 DTYKSLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVM 1080
            DTYKSLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVM
Sbjct: 1021 DTYKSLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVM 1080

Query: 1081 MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRD 1140
            MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRN+D
Sbjct: 1081 MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNKD 1140

Query: 1141 YSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKV 1200
            YS GIQKLMAMK DGIEPDYRIWTC IRAASLSES+SEAIIILNAL+DTGFDLPI     
Sbjct: 1141 YSAGIQKLMAMKADGIEPDYRIWTCCIRAASLSESSSEAIIILNALQDTGFDLPI----- 1200

Query: 1201 SFSCRLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQL 1260
                RLLTQKSG+LILEVDQFLEKLGALEDDDA FNFVNALEDLLWAFELRATASWVFQL
Sbjct: 1201 ----RLLTQKSGTLILEVDQFLEKLGALEDDDAGFNFVNALEDLLWAFELRATASWVFQL 1260

Query: 1261 AIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            AIKRSIYRQDIFRV DKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 AIKRSIYRQDIFRVFDKDWGADFRKLSAGSALVALTLWLDHMQDAS 1296

[Close]

BLAST of HG10001568 vs. ExPASy Swiss-Prot
Match: Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 1559.3 bits (4036), Expect = 0.0e+00
Identity = 801/1272 (62.97%), Postives = 987/1272 (77.59%), Query Frame = 0


Query: 29   EQQSEIHTIT--TQNFRYSRASPSVRWPNLKLTETF-QLPSQTHFKPPPP-SQTPEVSVR 88
            ++Q+ I + T  +Q F YSRASP+VRWP+L L E +   PSQT   P  P + TP+    
Sbjct: 25   DEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIYDSTPSQTLSSPVSPIAGTPD---- 84

Query: 89   TQNSEIKDGSYVEDELESSRMVGDETQEILGRPSKTRVKKMNKLALKRAKDWRERVQFLT 148
              + ++ D     +E ++     DET     R    RVKKMNK+AL +AKDWRERV+FLT
Sbjct: 85   --SGDVVDSIASREEQKTK----DETAVATRR---RRVKKMNKVALIKAKDWRERVKFLT 144

Query: 149  DKILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNA 208
            DKIL+LK ++FVAD+LD R VQMTPTD+CFVVK VG+ +W RALEV+EWLNLRHW+SPNA
Sbjct: 145  DKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNA 204

Query: 209  RMLATILAVLGKANQETLAVEIFTRSEPAIGNNVQVYNAMMGVYARNGRFVLVQELLDLM 268
            RM+A IL VLG+ NQE+LAVEIFTR+EP +G+ VQVYNAMMGVY+R+G+F   QEL+D M
Sbjct: 205  RMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM 264

Query: 269  SKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLISACSRES 328
             +RGC PDL+SFNTLINAR+KSG +TPNL+++ L+ VR SG+RPD ITYNTL+SACSR+S
Sbjct: 265  RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 324

Query: 329  NLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYN 388
            NL+ A+KV+ DME H CQPDLWTYNAMISVYGRCGLA+ AE+LF ELE KGFFPDAVTYN
Sbjct: 325  NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 384

Query: 389  SLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMK-L 448
            SLLYAFARE N EKVKE+ ++M   GFGKDEMTYNTIIHMYGKQ Q DLA QLY+DMK L
Sbjct: 385  SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 444

Query: 449  SGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVE 508
            SGR PD +TYTVLIDSLGK+++  EAA +M+EMLD G+KPTL+TYSALICGY KAGK  E
Sbjct: 445  SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 504

Query: 509  AEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLR 568
            AE TF CMLRSG +PD LAYSVM+D+ LR NET+KA  LY++M+ DG TP   LYE+M+ 
Sbjct: 505  AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 564

Query: 569  NLVKENKLDDIDKVIRDMQEQCGMNPQVISSILIKGECYGHAATMLRLAIDTGYDLDDEN 628
             L+KEN+ DDI K IRDM+E CGMNP  ISS+L+KGEC+  AA  L++AI  GY+L+++ 
Sbjct: 565  GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 624

Query: 629  LLSILSTFSLSGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTT 688
            LLSIL ++S SGRH EA ELLEFLKE  S S +L+ E LIV+ CK   + AAL EY    
Sbjct: 625  LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 684

Query: 689  RGFGSYGTGSLMYECLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGY 748
               G     S MYE L+  C   E +  AS VFSD+   G + SE++ + M++++CK+G+
Sbjct: 685  CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 744

Query: 749  PEIAHYLLERAELEGVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWN 808
            PE AH ++ +AE +G        Y +II+AYG+ KLWQKAES+VGN+R    T D K WN
Sbjct: 745  PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 804

Query: 809  ALIQAYAKSGCYERARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDM 868
            +L+ AYA+ GCYERARA+FNTMMRDGPSPTV SIN LL AL  D RL+ELYVVV+ELQDM
Sbjct: 805  SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 864

Query: 869  GFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDV 928
            GFKISKSS+LLMLDAFAR GNIFEVKKIY  MKAAGYLPT+ LYR MI LLCKGKRVRD 
Sbjct: 865  GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 924

Query: 929  EAMLSEMEESGFKPDLSVLNSVIKLYVGVEDFRNASRVYHLILETGLTPDEDTYNSLIIM 988
            E M+SEMEE+ FK +L++ NS++K+Y  +ED++   +VY  I ETGL PDE TYN+LIIM
Sbjct: 925  EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 984

Query: 989  YCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFDELRASGCKLD 1048
            YCRD RPEEG  LM +M+  G++P LDTYKSLISA  K++ +E+AE+LF+EL + G KLD
Sbjct: 985  YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1044

Query: 1049 RFFYHVMMKMFRNTGNHLKAERLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLN 1108
            R FYH MMK+ R++G+  KAE+LL MMK +GI+PT+ATMHLLMVSY SSG+P+EAEKVL+
Sbjct: 1045 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1104

Query: 1109 DLKATGMNLDTLPYSSVIDGYLRNRDYSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSE 1168
            +LK T + L TLPYSSVID YLR++DY+ GI++L+ MK +G+EPD+RIWTCF+RAAS S+
Sbjct: 1105 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1164

Query: 1169 STSEAIIILNALRDTGFDLPIRHFKVSFSCRLLTQKSGSLILEVDQFLEKLGALEDDDAA 1228
               E +++L AL D GFDLPI         RLL  +   L+ EVD + EKL ++E D+AA
Sbjct: 1165 EKIEVMLLLKALEDIGFDLPI---------RLLAGRPELLVSEVDGWFEKLKSIE-DNAA 1224

Query: 1229 FNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVA 1288
             NFVNAL +LLWAFELRATASWVFQL IKR I+  D+FRVADKDWGADFR+LS G+ALVA
Sbjct: 1225 LNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVA 1273

Query: 1289 LTLWLDHMQASS 1296
            LTLWLDHMQ +S
Sbjct: 1285 LTLWLDHMQDAS 1273

[Close]

BLAST of HG10001568 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 7.7e-69
Identity = 237/1010 (23.47%), Postives = 429/1010 (42.48%), Query Frame = 0


Query: 194  LNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAIGNNVQVYNAMMGVYARNGR 253
            LNL H  +     +   L V GK  +     ++  +    I  +   Y  +    +  G 
Sbjct: 112  LNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKR--IIKRDTNTYLTIFKSLSVKGG 171

Query: 254  FVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITY 313
                   L  M + G   +  S+N LI+  +KS   T   +++    +   G RP + TY
Sbjct: 172  LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE--AMEVYRRMILEGFRPSLQTY 231

Query: 314  NTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELES 373
            ++L+    +  +++  M +  +ME    +P+++T+   I V GR G  + A ++ K ++ 
Sbjct: 232  SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 291

Query: 374  KGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDL 433
            +G  PD VTY  L+ A      ++  KE+ E+M       D +TY T++  +      D 
Sbjct: 292  EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 351

Query: 434  AFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALIC 493
              Q + +M+  G +PD VT+T+L+D+L K+    EA + +  M D G+ P L TY+ LIC
Sbjct: 352  VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 411

Query: 494  G-----------------------------------YGKAGKPVEAEKTFDCMLRSGIRP 553
            G                                   YGK+G  V A +TF+ M   GI P
Sbjct: 412  GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 471

Query: 554  DYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVI 613
            + +A +  +    +    ++A  ++  +   GL PD   Y +M++   K  ++D+  K++
Sbjct: 472  NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 531

Query: 614  RDMQEQCGMNPQVI-----SSILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSL 673
             +M E  G  P VI      + L K +    A  M     +           ++L+    
Sbjct: 532  SEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 591

Query: 674  SGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALV-------------EYG 733
            +G+  EA EL E + +K    N +    L   LCK  ++  AL               + 
Sbjct: 592  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 651

Query: 734  NTTRGFGSYGTG-------------SLMYE------CLIQGCQEKELFDTASHVFSDMMF 793
              T  FG    G              L+Y        L+ G  +  L + A  + ++ ++
Sbjct: 652  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 711

Query: 794  YGVKISENLY--QVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEII-------D 853
                   NL+   ++  +  + G      +  ER    G+  D  S  V II       +
Sbjct: 712  NCADQPANLFWEDLIGSILAEAGIDNAVSF-SERLVANGICRDGDSILVPIIRYSCKHNN 771

Query: 854  AYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 913
              G   L++K    +G V+ KL T     +N LI    ++   E A+ VF  +   G  P
Sbjct: 772  VSGARTLFEKFTKDLG-VQPKLPT-----YNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 831

Query: 914  TVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 973
             V + N LL A     ++ EL+ + +E+     + +  +  +++    + GN+ +   +Y
Sbjct: 832  DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 891

Query: 974  HG-MKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVG 1033
            +  M    + PT   Y  +I  L K  R+ + + +   M + G +P+ ++ N +I  +  
Sbjct: 892  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 951

Query: 1034 VEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDT 1093
              +   A  ++  +++ G+ PD  TY+ L+   C   R +EGL    E+K  G+ P +  
Sbjct: 952  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 1011

Query: 1094 YKSLISALSKRQLVEEAEELFDELRAS-GCKLDRFFYHVMMKMFRNTGNHLKAERLLVMM 1121
            Y  +I+ L K   +EEA  LF+E++ S G   D + Y+ ++      G   +A ++   +
Sbjct: 1012 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1071

[Close]

BLAST of HG10001568 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-59
Identity = 215/965 (22.28%), Postives = 408/965 (42.28%), Query Frame = 0


Query: 223  AVEIFTRSEPAIGNNVQVY--NAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLI 282
            ++EIF R     G N  VY  NA++G   ++G  V V   L  M KR   PD+ +FN LI
Sbjct: 142  SLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 201

Query: 283  NARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHN 342
            N     G      S   + ++ KSG  P I+TYNT++    ++   + A+++ + M+   
Sbjct: 202  NVLCAEGSF--EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 261

Query: 343  CQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVK 402
               D+ TYN +I    R    ++   L +++  +   P+ VTYN+L+  F+ EG V    
Sbjct: 262  VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 321

Query: 403  EICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSL 462
            ++  EM++ G   + +T+N +I  +  +     A +++  M+  G  P EV+Y VL+D L
Sbjct: 322  QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 381

Query: 463  GKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDY 522
             K+++ + A      M  +GV     TY+ +I G  K G   EA    + M + GI PD 
Sbjct: 382  CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 441

Query: 523  LAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRD 582
            + YS +I+ F +    K A  +   + R GL+P+G +Y  ++ N  +   L +  ++   
Sbjct: 442  VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 501

Query: 583  MQEQCGMNPQVISSILIKGEC----YGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGR 642
            M  +         ++L+   C       A   +R     G   +  +   +++ +  SG 
Sbjct: 502  MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 561

Query: 643  HLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMY 702
             L+A  + + + +   +        L+  LCK   +  A  E    +         ++MY
Sbjct: 562  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA--EKFLKSLHAVPAAVDTVMY 621

Query: 703  ECLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAEL 762
              L+    +      A  +F +M+   +      Y  ++   C+ G   IA    + AE 
Sbjct: 622  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 681

Query: 763  EGVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYE 822
             G V+ +   Y   +D   +   W                              K+G Y 
Sbjct: 682  RGNVLPNKVMYTCFVDGMFKAGQW------------------------------KAGIYF 741

Query: 823  RARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLML 882
            R +     M   G +P +++ N ++       ++++   ++ E+ +     + ++  ++L
Sbjct: 742  REQ-----MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801

Query: 883  DAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFK 942
              +++  ++     +Y  +   G LP      S++  +C+   +     +L      G +
Sbjct: 802  HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 861

Query: 943  PDLSVLNSVIKLYVGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSL 1002
             D    N +I       +   A  +  ++   G++ D+DT ++++ +  R+ R +E   +
Sbjct: 862  VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921

Query: 1003 MHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRN 1062
            +HEM ++G+ P    Y  LI+ L +   ++ A  + +E+ A            M++    
Sbjct: 922  LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 981

Query: 1063 TGNHLKAERLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLP 1122
             G   +A  LL  M +  + PT+A+   LM     +G+  EA ++   +   G+ LD + 
Sbjct: 982  CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041

Query: 1123 YSSVIDGYLRNRDYSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSEST-SEAIIILNAL 1181
            Y+ +I G     D +   +    MK DG   +   +   IR     E+  S A IIL  L
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1066

[Close]

BLAST of HG10001568 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-57
Identity = 175/724 (24.17%), Postives = 318/724 (43.92%), Query Frame = 0


Query: 164 KVQMTPTDFCFVVKWVG-RSNWHRALEVYEWLNLRHWYSP--NARMLATILAVLGKANQE 223
           K + T ++    +K +G    +  AL  ++W   +  Y    +  ++A I+++LGK  + 
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRV 189

Query: 224 TLAVEIFT-RSEPAIGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTL 283
           + A  +F    E     +V  Y +++  +A +GR+     +   M + GC+P L+++N +
Sbjct: 190 SSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249

Query: 284 INARMKSGPMTP-NLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMER 343
           +N   K G  TP N     + +++  G+ PD  TYNTLI+ C R S  +EA +V+ +M+ 
Sbjct: 250 LNVFGKMG--TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 309

Query: 344 HNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEK 403
                D  TYNA++ VYG+      A ++  E+   GF P  VTYNSL+ A+AR+G +++
Sbjct: 310 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 369

Query: 404 VKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLID 463
             E+  +M   G   D  TY T++  + +  + + A  ++ +M+ +G  P+  T+   I 
Sbjct: 370 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 429

Query: 464 SLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRP 523
             G   K  E   I  E+   G+ P + T++ L+  +G+ G   E    F  M R+G  P
Sbjct: 430 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 489

Query: 524 DYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVI 583
           +   ++ +I  + R    ++AM +Y+ M+  G+TPD + Y  +L  L +    +  +KV+
Sbjct: 490 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 549

Query: 584 RDMQE-QCGMNPQVISSILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRH 643
            +M++ +C  N     S L+     G    ++    +  Y    E    +L T  L    
Sbjct: 550 AEMEDGRCKPNELTYCS-LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL---- 609

Query: 644 LEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYE 703
              C   + L E     ++L                          RGF    T      
Sbjct: 610 --VCSKCDLLPEAERAFSEL------------------------KERGFSPDIT---TLN 669

Query: 704 CLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELE 763
            ++     +++   A+ V   M   G   S   Y  +M MH +      +  +L     +
Sbjct: 670 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 729

Query: 764 GVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYER 823
           G+  D +S Y  +I AY      + A  +   +R      D   +N  I +YA    +E 
Sbjct: 730 GIKPDIIS-YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 789

Query: 824 ARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLD 882
           A  V   M++ G  P   + N ++      NR  E  + V++L+++     K   L +L+
Sbjct: 790 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLE 816

[Close]

BLAST of HG10001568 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-57
Identity = 142/540 (26.30%), Postives = 268/540 (49.63%), Query Frame = 0


Query: 140 VQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFVVK-WVGRSNWHRALEVYEWLNLRH 199
           V+ L +K+ +L     +A  LD  K +++  DF  V K + GR +W R+L +++++  + 
Sbjct: 76  VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135

Query: 200 WYSPNARMLATILAVLGKANQETLAVEIFTR-SEPAIGNNVQVYNAMMGVYARNGRFVLV 259
           W  PN  +   ++++LG+       +E+F       +  +V  Y A++  Y RNGR+   
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195

Query: 260 QELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLI 319
            ELLD M      P ++++NT+INA  + G     L L    E+R  G++PDI+TYNTL+
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGL-LGLFAEMRHEGIQPDIVTYNTLL 255

Query: 320 SACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFF 379
           SAC+     +EA  V+  M      PDL TY+ ++  +G+     +   L  E+ S G  
Sbjct: 256 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 315

Query: 380 PDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQL 439
           PD  +YN LL A+A+ G++++   +  +M   G   +  TY+ +++++G+  ++D   QL
Sbjct: 316 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 375

Query: 440 YRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGK 499
           + +MK S   PD  TY +LI+  G+    +E   +  +M++  ++P + TY  +I   GK
Sbjct: 376 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 435

Query: 500 AGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGAL 559
            G   +A K    M  + I P   AY+ +I+ F +    ++A++ +  M   G  P    
Sbjct: 436 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 495

Query: 560 YEVMLRNLVKENKLDDIDKVI-RDMQEQCGMNPQVISSILIKGECYGHAATMLRLAID-- 619
           +  +L +  +   + + + ++ R +      N    ++ +   +  G     ++  +D  
Sbjct: 496 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 555

Query: 620 -TGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQID 674
            +  D D+  L ++LS +S +    E  E  E +K      + +   +++ V  KT++ D
Sbjct: 556 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614

[Close]

BLAST of HG10001568 vs. ExPASy TrEMBL
Match: A0A5D3CB97 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00290 PE=4 SV=1)

HSP 1 Score: 2409.4 bits (6243), Expect = 0.0e+00
Identity = 1225/1318 (92.94%), Postives = 1258/1318 (95.45%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA TSSSKVCKPTS+SSSSIEQ  EIHT T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPS------QTPEVSVRTQNSEIKDGSYV-EDELESSRMVGDETQEI 120
            +FQLPSQTHF  PPPS         EVS RTQ SEI+DGS V EDELESSRMV DETQE+
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGN VQVYNAMMGVYARNGRFVLVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRAEQLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSKIEEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVIS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKV+RDMQE+CGMNPQ IS
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSN 660
            S+LIKGECYGHAA MLR+AI+TGYDLD+ENLLSILST+SLSGRHLEACELLEFLKEKTSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTAS 720
            SNQLV E LIVVLCKTKQIDAALVEYGN  R FGSYGT SLMYECLIQGCQEKELFDTAS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDA 780
            H+FSDMMFYGVKIS+ LYQVM+LM+CK GYPEIAHYLLERAELEG+VVDDVSTYVEIID+
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA VDRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVE 960
            GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEE+GFKPDL +LNSVIKLYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKES 1080
            SLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVMMKES
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRNRDYSGG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSC 1200
            IQKLMAMK DGIEPDYRIWTCFIRAASLSES+SEAIIILNAL+DTGFDLPI         
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPI--------- 1200

Query: 1201 RLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260
            RLLTQKSG+LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR
Sbjct: 1201 RLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260

Query: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFPMLWQMISTLSYLYD 1312
            SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSF M WQ+ISTLSYLYD
Sbjct: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTMPWQIISTLSYLYD 1309

[Close]

BLAST of HG10001568 vs. ExPASy TrEMBL
Match: A0A1S3CKK9 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501875 PE=4 SV=1)

HSP 1 Score: 2380.5 bits (6168), Expect = 0.0e+00
Identity = 1210/1302 (92.93%), Postives = 1243/1302 (95.47%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA TSSSKVCKPTS+SSSSIEQ  EIHT T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPS------QTPEVSVRTQNSEIKDGSYV-EDELESSRMVGDETQEI 120
            +FQLPSQTHF  PPPS         EVS RTQ SEI+DGS V EDELESSRMV DETQE+
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGN VQVYNAMMGVYARNGRFVLVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRAEQLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSKIEEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVIS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKV+RDMQE+CGMNPQ IS
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSN 660
            S+LIKGECYGHAA MLR+AI+TGYDLD+ENLLSILST+SLSGRHLEACELLEFLKEKTSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTAS 720
            SNQLV E LIVVLCKTKQIDAALVEYGN  R FGSYGT SLMYECLIQGCQEKELFDTAS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDA 780
            H+FSDMMFYGVKIS+ LYQVM+LM+CK GYPEIAHYLLERAELEG+VVDDVSTYVEIID+
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA VDRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVE 960
            GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEE+GFKPDL +LNSVIKLYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKES 1080
            SLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVMMKES
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRNRDYSGG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSC 1200
            IQKLMAMK DGIEPDYRIWTCFIRAASLSES+SEAIIILNAL+DTGFDLPI         
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPI--------- 1200

Query: 1201 RLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260
            RLLTQKSG+LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR
Sbjct: 1201 RLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260

Query: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1293

[Close]

BLAST of HG10001568 vs. ExPASy TrEMBL
Match: A0A5A7UY21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1779G00040 PE=4 SV=1)

HSP 1 Score: 2380.5 bits (6168), Expect = 0.0e+00
Identity = 1210/1302 (92.93%), Postives = 1243/1302 (95.47%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA TSSSKVCKPTS+SSSSIEQ  EIHT T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPS------QTPEVSVRTQNSEIKDGSYV-EDELESSRMVGDETQEI 120
            +FQLPSQTHF  PPPS         EVS RTQ SEI+DGS V EDELESSRMV DETQE+
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTD+ILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGN VQVYNAMMGVYARNGRFVLVQELLDLM KRGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRAEQLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSKIEEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVIS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKENKLDDIDKV+RDMQE+CGMNPQ IS
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSN 660
            S+LIKGECYGHAA MLR+AI+TGYDLD+ENLLSILST+SLSGRHLEACELLEFLKEKTSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTAS 720
            SNQLV E LIVVLCKTKQIDAALVEYGN  R FGSYGT SLMYECLIQGCQEKELFDTAS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDA 780
            H+FSDMMFYGVKIS+ LYQVM+LM+CK GYPEIAHYLLERAELEG+VVDDVSTYVEIID+
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA VDRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVE 960
            GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEE+GFKPDL +LNSVIKLYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKES 1080
            SLISALSKRQLVEEAEELF+ELR SG KLDRFFYHVMMKMFRNTGNHLKAE LLVMMKES
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVID YLRNRDYSGG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSC 1200
            IQKLMAMK DGIEPDYRIWTCFIRAASLSES+SEAIIILNAL+DTGFDLPI         
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPI--------- 1200

Query: 1201 RLLTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260
            RLLTQKSG+LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR
Sbjct: 1201 RLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR 1260

Query: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 SIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1293

[Close]

BLAST of HG10001568 vs. ExPASy TrEMBL
Match: A0A6J1H2M4 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111459534 PE=4 SV=1)

HSP 1 Score: 2306.9 bits (5977), Expect = 0.0e+00
Identity = 1169/1300 (89.92%), Postives = 1220/1300 (93.85%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA  SSSKVCKPTSASS    +QSE +T T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFASSSKVCKPTSASSI---EQSETNTNTSQQFRYSRASPSVRWPNLKLTE 60

Query: 61   TFQLPSQTHFKPPPPSQT-----PEVSVRTQNSEIKDGSYVEDELESSRMVGDETQEILG 120
            +FQ PSQT F    PSQT      EVS+RTQNSEI+DG +VEDELES  MV DETQE+LG
Sbjct: 61   SFQPPSQTQFTVSSPSQTHGVDESEVSIRTQNSEIRDGDFVEDELESMVMVSDETQEVLG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQ LTD+ILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RPSKTRVKKMTKLALKRAKDWRERVQLLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            N VQVYNAMMGVYARNGRFV VQELLDLM  RGCEPDLVSFNT+INARMKSGPM+PNL L
Sbjct: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGPMSPNLCL 300

Query: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRAEQLFKEL SKGFFPDAVTYNSLLYAFAREGN EKVKEICEEMV+NGFGKDE
Sbjct: 361  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNEEKVKEICEEMVSNGFGKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTE 480
            MTYNT+IHMYGKQEQHDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSKIEEAAN+MTE
Sbjct: 421  MTYNTMIHMYGKQEQHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANVMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISSI 600
            TKKAM LY++MVRDGLTPDGALYEVMLRNL KENKLD+IDKVI DMQE+CG+NPQVISSI
Sbjct: 541  TKKAMFLYRKMVRDGLTPDGALYEVMLRNLRKENKLDEIDKVISDMQERCGLNPQVISSI 600

Query: 601  LIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNSN 660
            L+K ECY HAA MLRLAIDTGYDLD E LLSILST+SLSGRHLEACELLEFLKEKTSNSN
Sbjct: 601  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKEKTSNSN 660

Query: 661  QLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTASHV 720
            QLV E +IVVLCK KQIDAALVEY NTTRGFGS+GT S++YECL+QGCQEKELFD ASH+
Sbjct: 661  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDAYG 780
            FSDMMFYGVKISE+LYQVMMLMHCK GYPEIAHYLLERAELEGV+VDDVSTYV II+AYG
Sbjct: 721  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTYVNIIEAYG 780

Query: 781  ELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVI 840
            ELKLWQKAESLVG ++LKLAT+DRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+V 
Sbjct: 781  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 840

Query: 841  SINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALI DNRLKELYVVVQELQDMGFKISKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSILLMLDAFARDGNIFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVEDF 960
            KAAGYLPTMHLYRSMIALLCKGKRVRDVEAML EMEE+GFKPDLS+LNSVIKLYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR+Y LI ETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 961  RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080
            ISALSKRQLVEEAEELF+ELR++GCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGGIQ 1140
            +PTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVID YLR  DY+GGI+
Sbjct: 1081 EPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRKGDYNGGIE 1140

Query: 1141 KLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSCRL 1200
            KLM MK DGIEPDYRIWTCFIRAASLSE T EAIIILNALRDTGFDLPI         RL
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASLSEGTGEAIIILNALRDTGFDLPI---------RL 1200

Query: 1201 LTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSI 1260
            LT+KS SL+LEVDQ LEKLGA+EDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR+I
Sbjct: 1201 LTEKSQSLVLEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNI 1260

Query: 1261 YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1261 YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1288

[Close]

BLAST of HG10001568 vs. ExPASy TrEMBL
Match: A0A6J1K203 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490996 PE=4 SV=1)

HSP 1 Score: 2304.6 bits (5971), Expect = 0.0e+00
Identity = 1168/1300 (89.85%), Postives = 1220/1300 (93.85%), Query Frame = 0


Query: 1    MACSAVLPLALTSSSKVCKPTSASSSSIEQQSEIHTITTQNFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLA  SSSKVCKPTSASS    +QSEI+T T+Q FRYSRASPSVRWPNLKLTE
Sbjct: 50   MACSAVLPLAFASSSKVCKPTSASSI---EQSEINTNTSQQFRYSRASPSVRWPNLKLTE 109

Query: 61   TFQLPSQTHFKPPPPSQT-----PEVSVRTQNSEIKDGSYVEDELESSRMVGDETQEILG 120
            +FQ PSQT F  P PSQT      EVS+RTQNSEI+DG +VEDE ES  MV DETQE+LG
Sbjct: 110  SFQPPSQTQFTVPSPSQTHGFDESEVSIRTQNSEIRDGDFVEDEFESMVMVSDETQEVLG 169

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 170  RPSKTRVKKMTKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV 229

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSE  IG
Sbjct: 230  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESVIG 289

Query: 241  NNVQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            N VQVYNAMMGVYARNGRFV VQELLDLM  RGCEPDLVSFNT+INARMKSG MTPNL L
Sbjct: 290  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGSMTPNLCL 349

Query: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 350  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 409

Query: 361  GRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRAEQLFKEL SKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGKDE
Sbjct: 410  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGKDE 469

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTE 480
            MTYNTIIHMYGKQE+HDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSKIEEAANIMTE
Sbjct: 470  MTYNTIIHMYGKQEKHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANIMTE 529

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 530  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 589

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISSI 600
            TKKAM LY++M+RDGLTPDGALYEVMLRNL KENKLD+ID+VI DMQE+C +NPQVISSI
Sbjct: 590  TKKAMFLYRKMLRDGLTPDGALYEVMLRNLRKENKLDEIDRVISDMQERCDLNPQVISSI 649

Query: 601  LIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNSN 660
            L+K ECY HAA MLRLAIDTGYDLD E LLSILST+SLSGRHLEACELLEFLKE+TSNSN
Sbjct: 650  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKERTSNSN 709

Query: 661  QLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFDTASHV 720
            QLV E +IVVLCK KQIDAALVEY NTTRGFGS+GT S++YECL+QGCQEKELFD ASH+
Sbjct: 710  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 769

Query: 721  FSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEIIDAYG 780
            FSDMMFYGVKISE+LYQVMMLMHCK GYPEIAHYLLERAELEGV+VDDVST V+II+AYG
Sbjct: 770  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTCVKIIEAYG 829

Query: 781  ELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVI 840
            ELKLWQKAESLVG ++LKLAT+DRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+V 
Sbjct: 830  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 889

Query: 841  SINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALI DNRLKELYVVVQELQDMGFK+SKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 890  SINGLLQALIVDNRLKELYVVVQELQDMGFKVSKSSILLMLDAFARDGNIFEVKKIYHGM 949

Query: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVGVEDF 960
            KAAGYLPTMHLYRSMIALLC GKRVRDVEAML EMEE+GFKPDLS+LNSVIKLYVGVEDF
Sbjct: 950  KAAGYLPTMHLYRSMIALLCNGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 1009

Query: 961  RNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR+Y LI ETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 1010 RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1069

Query: 1021 ISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080
            ISALSKRQLVEEAEELF+ELR++GCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI
Sbjct: 1070 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1129

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDGYLRNRDYSGGIQ 1140
            DPTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVID YLRN DY GGIQ
Sbjct: 1130 DPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRNGDYKGGIQ 1189

Query: 1141 KLMAMKVDGIEPDYRIWTCFIRAASLSESTSEAIIILNALRDTGFDLPIRHFKVSFSCRL 1200
            KL+ MK DGIEPDYRIWTCFIRAASLSEST EAIIILNAL+DTGFDLPI         RL
Sbjct: 1190 KLVEMKADGIEPDYRIWTCFIRAASLSESTGEAIIILNALQDTGFDLPI---------RL 1249

Query: 1201 LTQKSGSLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSI 1260
            LT+KS SL+LEVDQ LEKLGA+EDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKR+I
Sbjct: 1250 LTEKSQSLVLEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNI 1309

Query: 1261 YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 1296
            YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1310 YRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1337

[Close]

BLAST of HG10001568 vs. TAIR 10
Match: AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1559.3 bits (4036), Expect = 0.0e+00
Identity = 801/1272 (62.97%), Postives = 987/1272 (77.59%), Query Frame = 0


Query: 29   EQQSEIHTIT--TQNFRYSRASPSVRWPNLKLTETF-QLPSQTHFKPPPP-SQTPEVSVR 88
            ++Q+ I + T  +Q F YSRASP+VRWP+L L E +   PSQT   P  P + TP+    
Sbjct: 25   DEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIYDSTPSQTLSSPVSPIAGTPD---- 84

Query: 89   TQNSEIKDGSYVEDELESSRMVGDETQEILGRPSKTRVKKMNKLALKRAKDWRERVQFLT 148
              + ++ D     +E ++     DET     R    RVKKMNK+AL +AKDWRERV+FLT
Sbjct: 85   --SGDVVDSIASREEQKTK----DETAVATRR---RRVKKMNKVALIKAKDWRERVKFLT 144

Query: 149  DKILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNA 208
            DKIL+LK ++FVAD+LD R VQMTPTD+CFVVK VG+ +W RALEV+EWLNLRHW+SPNA
Sbjct: 145  DKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNA 204

Query: 209  RMLATILAVLGKANQETLAVEIFTRSEPAIGNNVQVYNAMMGVYARNGRFVLVQELLDLM 268
            RM+A IL VLG+ NQE+LAVEIFTR+EP +G+ VQVYNAMMGVY+R+G+F   QEL+D M
Sbjct: 205  RMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM 264

Query: 269  SKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLISACSRES 328
             +RGC PDL+SFNTLINAR+KSG +TPNL+++ L+ VR SG+RPD ITYNTL+SACSR+S
Sbjct: 265  RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 324

Query: 329  NLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYN 388
            NL+ A+KV+ DME H CQPDLWTYNAMISVYGRCGLA+ AE+LF ELE KGFFPDAVTYN
Sbjct: 325  NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 384

Query: 389  SLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMK-L 448
            SLLYAFARE N EKVKE+ ++M   GFGKDEMTYNTIIHMYGKQ Q DLA QLY+DMK L
Sbjct: 385  SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 444

Query: 449  SGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVE 508
            SGR PD +TYTVLIDSLGK+++  EAA +M+EMLD G+KPTL+TYSALICGY KAGK  E
Sbjct: 445  SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 504

Query: 509  AEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLR 568
            AE TF CMLRSG +PD LAYSVM+D+ LR NET+KA  LY++M+ DG TP   LYE+M+ 
Sbjct: 505  AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 564

Query: 569  NLVKENKLDDIDKVIRDMQEQCGMNPQVISSILIKGECYGHAATMLRLAIDTGYDLDDEN 628
             L+KEN+ DDI K IRDM+E CGMNP  ISS+L+KGEC+  AA  L++AI  GY+L+++ 
Sbjct: 565  GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 624

Query: 629  LLSILSTFSLSGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTT 688
            LLSIL ++S SGRH EA ELLEFLKE  S S +L+ E LIV+ CK   + AAL EY    
Sbjct: 625  LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 684

Query: 689  RGFGSYGTGSLMYECLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGY 748
               G     S MYE L+  C   E +  AS VFSD+   G + SE++ + M++++CK+G+
Sbjct: 685  CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 744

Query: 749  PEIAHYLLERAELEGVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWN 808
            PE AH ++ +AE +G        Y +II+AYG+ KLWQKAES+VGN+R    T D K WN
Sbjct: 745  PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 804

Query: 809  ALIQAYAKSGCYERARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDM 868
            +L+ AYA+ GCYERARA+FNTMMRDGPSPTV SIN LL AL  D RL+ELYVVV+ELQDM
Sbjct: 805  SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 864

Query: 869  GFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDV 928
            GFKISKSS+LLMLDAFAR GNIFEVKKIY  MKAAGYLPT+ LYR MI LLCKGKRVRD 
Sbjct: 865  GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 924

Query: 929  EAMLSEMEESGFKPDLSVLNSVIKLYVGVEDFRNASRVYHLILETGLTPDEDTYNSLIIM 988
            E M+SEMEE+ FK +L++ NS++K+Y  +ED++   +VY  I ETGL PDE TYN+LIIM
Sbjct: 925  EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 984

Query: 989  YCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFDELRASGCKLD 1048
            YCRD RPEEG  LM +M+  G++P LDTYKSLISA  K++ +E+AE+LF+EL + G KLD
Sbjct: 985  YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1044

Query: 1049 RFFYHVMMKMFRNTGNHLKAERLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLN 1108
            R FYH MMK+ R++G+  KAE+LL MMK +GI+PT+ATMHLLMVSY SSG+P+EAEKVL+
Sbjct: 1045 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1104

Query: 1109 DLKATGMNLDTLPYSSVIDGYLRNRDYSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSE 1168
            +LK T + L TLPYSSVID YLR++DY+ GI++L+ MK +G+EPD+RIWTCF+RAAS S+
Sbjct: 1105 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1164

Query: 1169 STSEAIIILNALRDTGFDLPIRHFKVSFSCRLLTQKSGSLILEVDQFLEKLGALEDDDAA 1228
               E +++L AL D GFDLPI         RLL  +   L+ EVD + EKL ++E D+AA
Sbjct: 1165 EKIEVMLLLKALEDIGFDLPI---------RLLAGRPELLVSEVDGWFEKLKSIE-DNAA 1224

Query: 1229 FNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVA 1288
             NFVNAL +LLWAFELRATASWVFQL IKR I+  D+FRVADKDWGADFR+LS G+ALVA
Sbjct: 1225 LNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVA 1273

Query: 1289 LTLWLDHMQASS 1296
            LTLWLDHMQ +S
Sbjct: 1285 LTLWLDHMQDAS 1273

[Close]

BLAST of HG10001568 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 264.2 bits (674), Expect = 5.5e-70
Identity = 237/1010 (23.47%), Postives = 429/1010 (42.48%), Query Frame = 0


Query: 194  LNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPAIGNNVQVYNAMMGVYARNGR 253
            LNL H  +     +   L V GK  +     ++  +    I  +   Y  +    +  G 
Sbjct: 112  LNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKR--IIKRDTNTYLTIFKSLSVKGG 171

Query: 254  FVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITY 313
                   L  M + G   +  S+N LI+  +KS   T   +++    +   G RP + TY
Sbjct: 172  LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE--AMEVYRRMILEGFRPSLQTY 231

Query: 314  NTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELES 373
            ++L+    +  +++  M +  +ME    +P+++T+   I V GR G  + A ++ K ++ 
Sbjct: 232  SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 291

Query: 374  KGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDL 433
            +G  PD VTY  L+ A      ++  KE+ E+M       D +TY T++  +      D 
Sbjct: 292  EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 351

Query: 434  AFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALIC 493
              Q + +M+  G +PD VT+T+L+D+L K+    EA + +  M D G+ P L TY+ LIC
Sbjct: 352  VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 411

Query: 494  G-----------------------------------YGKAGKPVEAEKTFDCMLRSGIRP 553
            G                                   YGK+G  V A +TF+ M   GI P
Sbjct: 412  GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 471

Query: 554  DYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVI 613
            + +A +  +    +    ++A  ++  +   GL PD   Y +M++   K  ++D+  K++
Sbjct: 472  NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 531

Query: 614  RDMQEQCGMNPQVI-----SSILIKGECYGHAATMLRLAIDTGYDLDDENLLSILSTFSL 673
             +M E  G  P VI      + L K +    A  M     +           ++L+    
Sbjct: 532  SEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 591

Query: 674  SGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALV-------------EYG 733
            +G+  EA EL E + +K    N +    L   LCK  ++  AL               + 
Sbjct: 592  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 651

Query: 734  NTTRGFGSYGTG-------------SLMYE------CLIQGCQEKELFDTASHVFSDMMF 793
              T  FG    G              L+Y        L+ G  +  L + A  + ++ ++
Sbjct: 652  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 711

Query: 794  YGVKISENLY--QVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEII-------D 853
                   NL+   ++  +  + G      +  ER    G+  D  S  V II       +
Sbjct: 712  NCADQPANLFWEDLIGSILAEAGIDNAVSF-SERLVANGICRDGDSILVPIIRYSCKHNN 771

Query: 854  AYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 913
              G   L++K    +G V+ KL T     +N LI    ++   E A+ VF  +   G  P
Sbjct: 772  VSGARTLFEKFTKDLG-VQPKLPT-----YNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 831

Query: 914  TVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 973
             V + N LL A     ++ EL+ + +E+     + +  +  +++    + GN+ +   +Y
Sbjct: 832  DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 891

Query: 974  HG-MKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLYVG 1033
            +  M    + PT   Y  +I  L K  R+ + + +   M + G +P+ ++ N +I  +  
Sbjct: 892  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 951

Query: 1034 VEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDT 1093
              +   A  ++  +++ G+ PD  TY+ L+   C   R +EGL    E+K  G+ P +  
Sbjct: 952  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 1011

Query: 1094 YKSLISALSKRQLVEEAEELFDELRAS-GCKLDRFFYHVMMKMFRNTGNHLKAERLLVMM 1121
            Y  +I+ L K   +EEA  LF+E++ S G   D + Y+ ++      G   +A ++   +
Sbjct: 1012 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1071

[Close]

BLAST of HG10001568 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-60
Identity = 215/965 (22.28%), Postives = 408/965 (42.28%), Query Frame = 0


Query: 223  AVEIFTRSEPAIGNNVQVY--NAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLI 282
            ++EIF R     G N  VY  NA++G   ++G  V V   L  M KR   PD+ +FN LI
Sbjct: 182  SLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 241

Query: 283  NARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHN 342
            N     G      S   + ++ KSG  P I+TYNT++    ++   + A+++ + M+   
Sbjct: 242  NVLCAEGSF--EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 301

Query: 343  CQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVK 402
               D+ TYN +I    R    ++   L +++  +   P+ VTYN+L+  F+ EG V    
Sbjct: 302  VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 361

Query: 403  EICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSL 462
            ++  EM++ G   + +T+N +I  +  +     A +++  M+  G  P EV+Y VL+D L
Sbjct: 362  QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 421

Query: 463  GKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDY 522
             K+++ + A      M  +GV     TY+ +I G  K G   EA    + M + GI PD 
Sbjct: 422  CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 481

Query: 523  LAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRD 582
            + YS +I+ F +    K A  +   + R GL+P+G +Y  ++ N  +   L +  ++   
Sbjct: 482  VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 541

Query: 583  MQEQCGMNPQVISSILIKGEC----YGHAATMLRLAIDTGYDLDDENLLSILSTFSLSGR 642
            M  +         ++L+   C       A   +R     G   +  +   +++ +  SG 
Sbjct: 542  MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 601

Query: 643  HLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMY 702
             L+A  + + + +   +        L+  LCK   +  A  E    +         ++MY
Sbjct: 602  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA--EKFLKSLHAVPAAVDTVMY 661

Query: 703  ECLIQGCQEKELFDTASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAEL 762
              L+    +      A  +F +M+   +      Y  ++   C+ G   IA    + AE 
Sbjct: 662  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 721

Query: 763  EGVVVDDVSTYVEIIDAYGELKLWQKAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYE 822
             G V+ +   Y   +D   +   W                              K+G Y 
Sbjct: 722  RGNVLPNKVMYTCFVDGMFKAGQW------------------------------KAGIYF 781

Query: 823  RARAVFNTMMRDGPSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLML 882
            R +     M   G +P +++ N ++       ++++   ++ E+ +     + ++  ++L
Sbjct: 782  REQ-----MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 841

Query: 883  DAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFK 942
              +++  ++     +Y  +   G LP      S++  +C+   +     +L      G +
Sbjct: 842  HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 901

Query: 943  PDLSVLNSVIKLYVGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSL 1002
             D    N +I       +   A  +  ++   G++ D+DT ++++ +  R+ R +E   +
Sbjct: 902  VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 961

Query: 1003 MHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRN 1062
            +HEM ++G+ P    Y  LI+ L +   ++ A  + +E+ A            M++    
Sbjct: 962  LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 1021

Query: 1063 TGNHLKAERLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLP 1122
             G   +A  LL  M +  + PT+A+   LM     +G+  EA ++   +   G+ LD + 
Sbjct: 1022 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1081

Query: 1123 YSSVIDGYLRNRDYSGGIQKLMAMKVDGIEPDYRIWTCFIRAASLSEST-SEAIIILNAL 1181
            Y+ +I G     D +   +    MK DG   +   +   IR     E+  S A IIL  L
Sbjct: 1082 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1106

[Close]

BLAST of HG10001568 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-58
Identity = 142/540 (26.30%), Postives = 268/540 (49.63%), Query Frame = 0


Query: 140 VQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFVVK-WVGRSNWHRALEVYEWLNLRH 199
           V+ L +K+ +L     +A  LD  K +++  DF  V K + GR +W R+L +++++  + 
Sbjct: 76  VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135

Query: 200 WYSPNARMLATILAVLGKANQETLAVEIFTR-SEPAIGNNVQVYNAMMGVYARNGRFVLV 259
           W  PN  +   ++++LG+       +E+F       +  +V  Y A++  Y RNGR+   
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195

Query: 260 QELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGVRPDIITYNTLI 319
            ELLD M      P ++++NT+INA  + G     L L    E+R  G++PDI+TYNTL+
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGL-LGLFAEMRHEGIQPDIVTYNTLL 255

Query: 320 SACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRAEQLFKELESKGFF 379
           SAC+     +EA  V+  M      PDL TY+ ++  +G+     +   L  E+ S G  
Sbjct: 256 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 315

Query: 380 PDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQL 439
           PD  +YN LL A+A+ G++++   +  +M   G   +  TY+ +++++G+  ++D   QL
Sbjct: 316 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 375

Query: 440 YRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEMLDSGVKPTLRTYSALICGYGK 499
           + +MK S   PD  TY +LI+  G+    +E   +  +M++  ++P + TY  +I   GK
Sbjct: 376 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 435

Query: 500 AGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGAL 559
            G   +A K    M  + I P   AY+ +I+ F +    ++A++ +  M   G  P    
Sbjct: 436 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 495

Query: 560 YEVMLRNLVKENKLDDIDKVI-RDMQEQCGMNPQVISSILIKGECYGHAATMLRLAID-- 619
           +  +L +  +   + + + ++ R +      N    ++ +   +  G     ++  +D  
Sbjct: 496 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 555

Query: 620 -TGYDLDDENLLSILSTFSLSGRHLEACELLEFLKEKTSNSNQLVIELLIVVLCKTKQID 674
            +  D D+  L ++LS +S +    E  E  E +K      + +   +++ V  KT++ D
Sbjct: 556 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614

[Close]

BLAST of HG10001568 vs. TAIR 10
Match: AT5G14770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 2.4e-57
Identity = 204/852 (23.94%), Postives = 372/852 (43.66%), Query Frame = 0


Query: 238  VQVYNAMMGVYARNGRFVLVQELLDLMSKRGCEPDLVSFNTLINARMKSGPMTPNLSLQF 297
            V +++ +  +Y    R       L  M   G  PD   +N+LI+    +G +   +SL +
Sbjct: 58   VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117

Query: 298  LNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGR 357
             +++   GV PD+   N LI +  +   L  A+ +   +       D  TYN +IS    
Sbjct: 118  -SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCE 177

Query: 358  CGLASRAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMT 417
             GLA  A Q   E+   G  PD V+YN+L+  F + GN  + K + +E+         + 
Sbjct: 178  HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 237

Query: 418  YNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEAANIMTEML 477
             ++  +++  +E        YRDM +SG  PD VT++ +I+ L K  K+ E   ++ EM 
Sbjct: 238  LSSYYNLHAIEE-------AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 297

Query: 478  DSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETK 537
            +  V P   TY+ L+    KA     A   +  M+  GI  D + Y+V++D   +  + +
Sbjct: 298  EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 357

Query: 538  KAMLLYKEMVRDGLTPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISSILI 597
            +A   +K ++ D   P+   Y  ++  L K   L   + +I  M E+  +   V  S +I
Sbjct: 358  EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 417

Query: 598  KGECYGHAATMLRLAIDTGYDLDDENLL-------SILSTFSLSGRHLEACELLEFLKEK 657
             G        ML  A+     ++D+N++       +++     +G+   A EL + ++  
Sbjct: 418  NGYV---KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 477

Query: 658  TSNSNQLVIELLIVVLCKTKQIDAALVEYGNTTRGFGSYGTGSLMYECLIQGCQEKELFD 717
                N  +++ L+  L +  +I                                 KE+  
Sbjct: 478  GVEENNYILDALVNHLKRIGRI---------------------------------KEV-- 537

Query: 718  TASHVFSDMMFYGVKISENLYQVMMLMHCKIGYPEIAHYLLERAELEGVVVDDVSTYVEI 777
                +  DM+  GV + +  Y  ++ +  K G  E A    E  +  G+  D VS  V I
Sbjct: 538  --KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 597

Query: 778  IDAYGELKLWQ-KAESLVGNVRLKLATVDRKIWNALIQAYAKSGCYERARAVFNTMMRDG 837
                G LK  +  A+     +R K    D   +N ++ +  K G  E    +++ M   G
Sbjct: 598  ---SGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 657

Query: 838  PSPTVISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVK 897
              P+++S N ++  L  + +++E   ++ ++  M    + ++  + LD  ++      + 
Sbjct: 658  IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 717

Query: 898  KIYHGMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEESGFKPDLSVLNSVIKLY 957
            K +  + + G   +  +Y ++IA LCK    +    ++ +ME  GF PD    NS++  Y
Sbjct: 718  KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 777

Query: 958  VGVEDFRNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVL 1017
                  R A   Y +++E G++P+  TYN++I         +E    + EMK RGM P  
Sbjct: 778  FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 837

Query: 1018 DTYKSLISALSKRQLVEEAEELFDELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVM 1077
             TY +LIS  +K   ++ +  ++ E+ A G       Y+V++  F N G  L+A  LL  
Sbjct: 838  FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 855

Query: 1078 MKESGIDPTVAT 1082
            M + G+ P  +T
Sbjct: 898  MGKRGVSPNTST 855

The following BLAST results are available for this feature:

BLAST of HG10001568 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901451.1	0.0e+00	93.77	pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 ...	[more]
TYK07589.1	0.0e+00	92.94	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008463825.1	0.0e+00	92.93	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
XP_038901455.1	0.0e+00	93.76	pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X2 ...	[more]
XP_011657187.1	0.0e+00	91.65	pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 ...	[more]

BLAST of HG10001568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5G1S8	0.0e+00	62.97	Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop...	[more]
Q9SZ52	7.7e-69	23.47	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
Q9LVQ5	1.9e-59	22.28	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9LYZ9	1.0e-57	24.17	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX...	[more]
Q9S7Q2	1.8e-57	26.30	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]

BLAST of HG10001568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB97	0.0e+00	92.94	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CKK9	0.0e+00	92.93	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucumis ...	[more]
A0A5A7UY21	0.0e+00	92.93	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1H2M4	0.0e+00	89.92	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbit...	[more]
A0A6J1K203	0.0e+00	89.85	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbit...	[more]

BLAST of HG10001568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18110.1	0.0e+00	62.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G31850.1	5.5e-70	23.47	proton gradient regulation 3	[more]
AT5G55840.1	1.3e-60	22.28	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74850.1	1.3e-58	26.30	plastid transcriptionally active 2	[more]
AT5G14770.1	2.4e-57	23.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..88
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 12..1263
None	No IPR available	PANTHER	PTHR47933:SF31	OS06G0199100 PROTEIN	coord: 12..1263
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 760..870 e-value: 7.0E-18 score: 67.1 coord: 292..413 e-value: 6.0E-38 score: 133.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 871..986 e-value: 3.5E-24 score: 87.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 618..756 e-value: 3.3E-7 score: 32.0 coord: 1071..1137 e-value: 9.1E-7 score: 30.6 coord: 129..291 e-value: 1.6E-23 score: 85.2 coord: 1000..1070 e-value: 3.1E-13 score: 51.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 422..601 e-value: 2.7E-41 score: 143.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 801..829 e-value: 2.9E-6 score: 27.1 coord: 874..899 e-value: 0.18 score: 12.1 coord: 907..935 e-value: 0.0029 score: 17.8 coord: 1117..1145 e-value: 0.85 score: 10.0 coord: 381..411 e-value: 1.2E-6 score: 28.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 308..352 e-value: 1.7E-15 score: 56.9 coord: 487..529 e-value: 3.7E-8 score: 33.4 coord: 413..461 e-value: 1.3E-14 score: 54.2 coord: 237..282 e-value: 4.5E-10 score: 39.6 coord: 972..1021 e-value: 1.2E-10 score: 41.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 522..554 e-value: 4.6E-5 score: 21.3 coord: 311..344 e-value: 6.0E-11 score: 39.8 coord: 1047..1078 e-value: 0.002 score: 16.1 coord: 240..272 e-value: 4.3E-7 score: 27.7 coord: 417..450 e-value: 3.8E-7 score: 27.9 coord: 487..519 e-value: 1.3E-7 score: 29.3 coord: 801..833 e-value: 3.3E-7 score: 28.0 coord: 906..938 e-value: 9.3E-7 score: 26.7 coord: 347..380 e-value: 2.0E-7 score: 28.7 coord: 381..412 e-value: 2.2E-7 score: 28.6 coord: 1011..1043 e-value: 5.1E-7 score: 27.5 coord: 451..484 e-value: 8.9E-7 score: 26.7 coord: 976..1007 e-value: 2.1E-8 score: 31.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 1031..1090 e-value: 1.4E-5 score: 25.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 903..937 score: 10.840783
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 484..518 score: 12.309597
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 973..1007 score: 13.17554
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 519..553 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1113..1147 score: 9.218511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 237..271 score: 11.750571
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 449..483 score: 12.397287
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 309..343 score: 13.778412
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 379..413 score: 11.651919
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 344..378 score: 12.649398
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..308 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 414..448 score: 11.640958
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1043..1077 score: 9.920034
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1008..1042 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 798..832 score: 12.035565

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001568.1	HG10001568.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0005515	protein binding