HG10001470 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001470
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR14-like
LocationChr09: 17391034 .. 17391405 (-)
RNA-Seq ExpressionHG10001470
SyntenyHG10001470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAAATCGTGTAAAGAAATTAGGAGATGGGAAACAAGAGAAATTTGAGATTTTACTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTGTTTGGGAGACGAGGAAAAAGAAGTGGATCGGGGGGATGATTTGGTGAAGACTCCGAGATCTTTGGAACCTACGGCGGTTGTTCTTCAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTTGCCGTCGGTGGGGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAGTAA

mRNA sequence

ATGGAGGAAAATCGTGTAAAGAAATTAGGAGATGGGAAACAAGAGAAATTTGAGATTTTACTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTGTTTGGGAGACGAGGAAAAAGAAGTGGATCGGGGGGATGATTTGGTGAAGACTCCGAGATCTTTGGAACCTACGGCGGTTGTTCTTCAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTTGCCGTCGGTGGGGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAGTAA

Coding sequence (CDS)

ATGGAGGAAAATCGTGTAAAGAAATTAGGAGATGGGAAACAAGAGAAATTTGAGATTTTACTGTCTACTTTGGAGTTAAGGTTGCCGTTGCCGAGTTGTTGTTGTTTGGGAGACGAGGAAAAAGAAGTGGATCGGGGGGATGATTTGGTGAAGACTCCGAGATCTTTGGAACCTACGGCGGTTGTTCTTCAGTGTCCTCCGCCGCCGAGAAAACCGAGGAGGTTGCCGTCGGTGGGGAAACGGAAGGCCGGTGGTGGCCGGTCGATTTTGATGTCGCATGATTATTTCTTTGGTGACGTGGAATTGGAGTTGCTGTTTCCGTCGAATCTTGTCGGCGGTAAGATTGTTAAGAAAGTTAAACGAGTAGAGTAA

Protein sequence

MEENRVKKLGDGKQEKFEILLSTLELRLPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPPRKPRRLPSVGKRKAGGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKRVE
Homology
BLAST of HG10001470 vs. NCBI nr
Match: KAE8646970.1 (hypothetical protein Csa_020640 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 3.5e-45
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0

Query: 7   KKLGDGKQ-EKFEILLSTLELR--LPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVL 66
           K+  DGK+ EKFEILLSTLELR  LPLPS CCLGD+EKEVDRGDDL+KTPRSLEPT+VVL
Sbjct: 5   KRSEDGKKLEKFEILLSTLELRLPLPLPSFCCLGDKEKEVDRGDDLMKTPRSLEPTSVVL 64

Query: 67  QCPPPPRKPRRLPSVGKRKA--GGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKR 124
           QCPPPPRKPRR PS  KRKA  GGGRSILMSHDYFF DVEL+ LFPSN+VGGKIVKK+K 
Sbjct: 65  QCPPPPRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDWLFPSNVVGGKIVKKIKG 124

BLAST of HG10001470 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima])

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28
Identity = 81/112 (72.32%), Postives = 89/112 (79.46%), Query Frame = 0

Query: 13  KQEKFEILLSTLELRLPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPPRKP 72
           K++KFEILLSTLEL+L   SC    DEE+E D  DD VKTPRSLEP AVVLQCPPPPRKP
Sbjct: 7   KEDKFEILLSTLELKLQ-SSCFRHEDEEEEEDCRDDFVKTPRSLEP-AVVLQCPPPPRKP 66

Query: 73  RRLPSVGKRKAGGGRSILMSHDYFFG--DVELELLFPSN-LVGGKIVKKVKR 122
           RRLPS  KRKAG GRSI MSH+  F   +V+LELLFPSN L GG+IVKKVKR
Sbjct: 67  RRLPS-AKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKR 115

BLAST of HG10001470 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 77/112 (68.75%), Postives = 88/112 (78.57%), Query Frame = 0

Query: 13  KQEKFEILLSTLELRLPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPPRKP 72
           K++KFEILLSTLEL+L         +EE+E D  DD VKTPRSL+P A VL+CPPPPRKP
Sbjct: 6   KEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPA-VLECPPPPRKP 65

Query: 73  RRLPSVGKRKAGGGRSILMSHDYFFG--DVELELLFPSN-LVGGKIVKKVKR 122
           RRLPS+ KRKAGGGRSI MSH   FG  +V+LELLFPSN L GG+IVKKVKR
Sbjct: 66  RRLPSM-KRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKR 115

BLAST of HG10001470 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 3.3e-27
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 0

Query: 6   VKKLGDGKQEKFEILLSTLELRLPLPSCCCLGDEEKEVD--RGDDLVKTPRSLEPTAVVL 65
           +++  D K++KFEILLSTLELRLPL S C   +EE++ D  R DDLVKTPRSLEP A +L
Sbjct: 1   MEQFEDPKEDKFEILLSTLELRLPLSSFCLRPEEEEDNDEARPDDLVKTPRSLEP-AAIL 60

Query: 66  QCPPPPRKPRRLPSVGKRKAGGGRSILMSHDYFFGDVE-LELLFPSNL 111
           +CPPPPRKPRRLPSV KRKA GGR   M HDY FG+++ LE+LFPSNL
Sbjct: 61  ECPPPPRKPRRLPSVRKRKA-GGRLTFMPHDYVFGEMKSLEVLFPSNL 106

BLAST of HG10001470 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25
Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0

Query: 13  KQEKFEILLSTLELRLPLPSCCCL---GDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPP 72
           K++KFEILLSTLEL+  L S C      DEE+E D  DD VKTPRSLEP A VL+CPPPP
Sbjct: 6   KEDKFEILLSTLELK--LQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPA-VLECPPPP 65

Query: 73  RKPRRLPSVGKRKAGGGRSILMSHDYFFG--DVELELLFPSN-LVGGKIVKKVKR 122
           RKPRR PS  KRKAG  RSI MSH   FG  +V+LELLFPSN L GG+IVKKVKR
Sbjct: 66  RKPRRFPS-AKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKR 116

BLAST of HG10001470 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-45
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0

Query: 7   KKLGDGKQ-EKFEILLSTLELR--LPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVL 66
           K+  DGK+ EKFEILLSTLELR  LPLPS CCLGD+EKEVDRGDDL+KTPRSLEPT+VVL
Sbjct: 4   KRSEDGKKLEKFEILLSTLELRLPLPLPSFCCLGDKEKEVDRGDDLMKTPRSLEPTSVVL 63

Query: 67  QCPPPPRKPRRLPSVGKRKA--GGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKR 124
           QCPPPPRKPRR PS  KRKA  GGGRSILMSHDYFF DVEL+ LFPSN+VGGKIVKK+K 
Sbjct: 64  QCPPPPRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDWLFPSNVVGGKIVKKIKG 123

BLAST of HG10001470 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 81/112 (72.32%), Postives = 89/112 (79.46%), Query Frame = 0

Query: 13  KQEKFEILLSTLELRLPLPSCCCLGDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPPRKP 72
           K++KFEILLSTLEL+L   SC    DEE+E D  DD VKTPRSLEP AVVLQCPPPPRKP
Sbjct: 7   KEDKFEILLSTLELKLQ-SSCFRHEDEEEEEDCRDDFVKTPRSLEP-AVVLQCPPPPRKP 66

Query: 73  RRLPSVGKRKAGGGRSILMSHDYFFG--DVELELLFPSN-LVGGKIVKKVKR 122
           RRLPS  KRKAG GRSI MSH+  F   +V+LELLFPSN L GG+IVKKVKR
Sbjct: 67  RRLPS-AKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKR 115

BLAST of HG10001470 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 77/115 (66.96%), Postives = 86/115 (74.78%), Query Frame = 0

Query: 13  KQEKFEILLSTLELRLPLPSCCCL---GDEEKEVDRGDDLVKTPRSLEPTAVVLQCPPPP 72
           K++KFEILLSTLEL+  L S C      DE++E D  DD VKTPRSLEP A VL+CPPPP
Sbjct: 6   KEDKFEILLSTLELK--LQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPA-VLECPPPP 65

Query: 73  RKPRRLPSVGKRKAGGGRSILMSHDYFFG--DVELELLFPSN-LVGGKIVKKVKR 122
           RKPRR PS  KRKAG  RSI MSH   FG  +V+LELLFPSN L GG+IVKKVKR
Sbjct: 66  RKPRRFPS-AKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKR 116

BLAST of HG10001470 vs. ExPASy TrEMBL
Match: A0A7J7DZ51 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00478 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.2e-08
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 0

Query: 10  GDGKQEKFEILLSTLELRLPLPSCCCLGDEEKEVDRGDDLVKTPRSLE-PTAVVLQCPPP 69
           G G  +K+E ++S+L L+L  P      D    +D  +D  +TP S +    VVLQCPP 
Sbjct: 66  GGGGGKKYEFMVSSLNLKLQPPREFGCDD----IDDQNDGFRTPTSSDHKIPVVLQCPPA 125

Query: 70  PRKPRRLPSVGKRKAGGGRSILMSHDYFFGDVELELLFPSNLVGGKIVKKVKR 122
           PRKPR LPS  KRK+   R +++         E+E LFP NLVG KI KKV++
Sbjct: 126 PRKPRSLPS--KRKSSCQRVLVLDL-----SKEIESLFPPNLVGNKI-KKVRQ 166

BLAST of HG10001470 vs. ExPASy TrEMBL
Match: A0A200R6N2 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1835g789 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 0

Query: 2   EENRVKKLGDGKQEKFEILLSTLELRLPLPSCCCLGDEE-----------KEVDRGDDLV 61
           +E R  K G+ K EK  ++  +L+ +L +PS   +GD++           ++VD  DD  
Sbjct: 80  DEERENKDGETKCEKIHVI--SLKKKLEMPS--LIGDDDDDDDDDDELNKQDVDEDDDGF 139

Query: 62  KTPRSLE---PTAVVLQCPPPPRKPRRLPSVGKRKAGGGRSILMSHDYFFGDV--ELELL 121
           +TP SL+   P   VLQCPP P+KP+  PS  KRK+      L  H     D   E+E L
Sbjct: 140 RTPTSLDKKIPVIPVLQCPPAPKKPKSRPST-KRKSSSSHHQLHRHFQILHDYSEEIESL 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646970.13.5e-4581.15hypothetical protein Csa_020640 [Cucumis sativus][more]
XP_023006801.12.3e-2872.32cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima][more]
XP_023532326.11.5e-2768.75cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo][more]
KAG6570710.13.3e-2766.67hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6605463.11.0e-2567.83hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KHB11.7e-4581.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1[more]
A0A6J1KYS41.1e-2872.32cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1G7X11.5e-2566.96cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=36... [more]
A0A7J7DZ516.2e-0842.48Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00478 ... [more]
A0A200R6N21.1e-0735.51Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1835g789 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001470.1HG10001470.1mRNA