HG10001419 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001419
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	chitinase 2-like
Location	Chr09: 16967033 .. 16967950 (-)
RNA-Seq Expression	HG10001419
Synteny	HG10001419

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCCGATATTCTTCCTATTTTCAGTTCTACAATTCCTTTTCGTCATACTTCCAACACTAGAAGCAGCCCCCTTAAATAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGGCATAAATATTAGATTTTCAGACGTACCTATTCATCCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCCATCGATTACATGGGTTCATCCTCTCCTTCTGCAACAAATGGCAAATTCAAAGTCTTTTGGGACGAAGAAAACCTCTCGCCTTCTTCTGTTTCTTCCATCAAGGCCAAGCATTCGAATGTCAAGTTCGCGCTCAGCCTTGGAGGTGATACAGTAGGTAAAGAATTTGCACACTTCAAGCCCAAATCCATTACATCTTGGGTTAAAAATGCTTTCAAGTCCATATCTCATGTAGTGAAGGAGTATGGTCTAGATGGGATTGACATCGATTATGAACACTTCAAAGCACACCCTGATACGTTCACTGAGTGCATAGGGCAACTTCTACTCCGTCTAAAACGTCAAAATGTCATTTCATTTGCATCCATTGCACCGTTTGAGGATGACACTATCCAGTCACATTACTTGGCTTTGTGGAGGAAGTATGGAGATCTAATAGACTATGTCAACTTCCAATTCTATGCCTATGGAAAAGGGACCACAGTTTCTCAGTTTTTGAATCATTTTGATACCCAAAGCTCTAATTATGAAGGAGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTTAAGGCATGCAGCACCCTTCAAAGTAGGGGCAAACTTCATGGTATATTTGTTTGGTCGGCGGATGATTCGAAGAAGAATGACTTTCGTAATGAGATACAGGCACAAAACCTTTTGGCCAATGCAGAATGA

mRNA sequence

ATGGATTCTCCGATATTCTTCCTATTTTCAGTTCTACAATTCCTTTTCGTCATACTTCCAACACTAGAAGCAGCCCCCTTAAATAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGGCATAAATATTAGATTTTCAGACGTACCTATTCATCCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCCATCGATTACATGGGTTCATCCTCTCCTTCTGCAACAAATGGCAAATTCAAAGTCTTTTGGGACGAAGAAAACCTCTCGCCTTCTTCTGTTTCTTCCATCAAGGCCAAGCATTCGAATGTCAAGTTCGCGCTCAGCCTTGGAGGTGATACAGTAGGTAAAGAATTTGCACACTTCAAGCCCAAATCCATTACATCTTGGGTTAAAAATGCTTTCAAGTCCATATCTCATGTAGTGAAGGAGTATGGTCTAGATGGGATTGACATCGATTATGAACACTTCAAAGCACACCCTGATACGTTCACTGAGTGCATAGGGCAACTTCTACTCCGTCTAAAACGTCAAAATGTCATTTCATTTGCATCCATTGCACCGTTTGAGGATGACACTATCCAGTCACATTACTTGGCTTTGTGGAGGAAGTATGGAGATCTAATAGACTATGTCAACTTCCAATTCTATGCCTATGGAAAAGGGACCACAGTTTCTCAGTTTTTGAATCATTTTGATACCCAAAGCTCTAATTATGAAGGAGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTTAAGGCATGCAGCACCCTTCAAAGTAGGGGCAAACTTCATGGTATATTTGTTTGGTCGGCGGATGATTCGAAGAAGAATGACTTTCGTAATGAGATACAGGCACAAAACCTTTTGGCCAATGCAGAATGA

Coding sequence (CDS)

ATGGATTCTCCGATATTCTTCCTATTTTCAGTTCTACAATTCCTTTTCGTCATACTTCCAACACTAGAAGCAGCCCCCTTAAATAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGGCATAAATATTAGATTTTCAGACGTACCTATTCATCCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCCATCGATTACATGGGTTCATCCTCTCCTTCTGCAACAAATGGCAAATTCAAAGTCTTTTGGGACGAAGAAAACCTCTCGCCTTCTTCTGTTTCTTCCATCAAGGCCAAGCATTCGAATGTCAAGTTCGCGCTCAGCCTTGGAGGTGATACAGTAGGTAAAGAATTTGCACACTTCAAGCCCAAATCCATTACATCTTGGGTTAAAAATGCTTTCAAGTCCATATCTCATGTAGTGAAGGAGTATGGTCTAGATGGGATTGACATCGATTATGAACACTTCAAAGCACACCCTGATACGTTCACTGAGTGCATAGGGCAACTTCTACTCCGTCTAAAACGTCAAAATGTCATTTCATTTGCATCCATTGCACCGTTTGAGGATGACACTATCCAGTCACATTACTTGGCTTTGTGGAGGAAGTATGGAGATCTAATAGACTATGTCAACTTCCAATTCTATGCCTATGGAAAAGGGACCACAGTTTCTCAGTTTTTGAATCATTTTGATACCCAAAGCTCTAATTATGAAGGAGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTTAAGGCATGCAGCACCCTTCAAAGTAGGGGCAAACTTCATGGTATATTTGTTTGGTCGGCGGATGATTCGAAGAAGAATGACTTTCGTAATGAGATACAGGCACAAAACCTTTTGGCCAATGCAGAATGA

Protein sequence

MDSPIFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANAE

Homology

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BLAST of HG10001419 vs. NCBI nr
Match: XP_038902883.1 (chitinase 2-like [Benincasa hispida])

HSP 1 Score: 549.3 bits (1414), Expect = 2.1e-152
Identity = 273/307 (88.93%), Postives = 286/307 (93.16%), Query Frame = 0


Query: 1   MDSPIFFLFSVLQFL--FVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFH 60
           M S IFFL+S LQFL  F ILP+L+AAP     LFREYIGAEGINIRFSDVPIH DVEFH
Sbjct: 1   MGSRIFFLYSFLQFLSVFAILPSLKAAP-----LFREYIGAEGINIRFSDVPIHSDVEFH 60

Query: 61  FILSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKE 120
           FILSFAIDY GSSSPSATNGKF+VFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKE
Sbjct: 61  FILSFAIDYTGSSSPSATNGKFRVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKE 120

Query: 121 FAHFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQ 180
           FA FKPKSITSWV NAFKSIS +VK+Y LDG+DIDYEHFKAHPD FTECIGQLLLRLK+ 
Sbjct: 121 FAFFKPKSITSWVNNAFKSISRIVKKYDLDGVDIDYEHFKAHPDIFTECIGQLLLRLKQH 180

Query: 181 NVISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSN 240
           N+ISFASIAPFEDDT+QSHY+ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHF+TQSSN
Sbjct: 181 NLISFASIAPFEDDTVQSHYMALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFETQSSN 240

Query: 241 YEGGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQ 300
           YEGGKVLASFATDGSGGLTPEKGFFKACSTLQSRG LHGIFVWSADDSKKNDF NEIQAQ
Sbjct: 241 YEGGKVLASFATDGSGGLTPEKGFFKACSTLQSRGNLHGIFVWSADDSKKNDFHNEIQAQ 300

Query: 301 NLLANAE 306
           NLLANA+
Sbjct: 301 NLLANAK 302

[Close]

BLAST of HG10001419 vs. NCBI nr
Match: XP_022944087.1 (chitinase 2-like [Cucurbita moschata])

HSP 1 Score: 545.0 bits (1403), Expect = 4.0e-151
Identity = 262/301 (87.04%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 5   IFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFA 64
           IFFLFS L  LF  LP+LEA PL+NTRLFREYIGA+G N+RFSDVPIHPDVEFHFILSFA
Sbjct: 23  IFFLFSFLPLLFPTLPSLEATPLDNTRLFREYIGADGNNVRFSDVPIHPDVEFHFILSFA 82

Query: 65  IDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKP 124
           IDY  SSSPSATNGKF+VFWDE+ LSPSSVSSIKA+HSNVKFALSLGGDT GK+FA+FKP
Sbjct: 83  IDYTASSSPSATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKP 142

Query: 125 KSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFA 184
           KSITSWVKNAF+SIS +VKEY +DG+DIDYEHFKAHPD FTECIG+LLLRLKRQNVISFA
Sbjct: 143 KSITSWVKNAFESISRIVKEYDIDGVDIDYEHFKAHPDVFTECIGKLLLRLKRQNVISFA 202

Query: 185 SIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKV 244
           SIAPF+DD +Q+HYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHF+TQ+SNY+GGKV
Sbjct: 203 SIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFETQTSNYQGGKV 262

Query: 245 LASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANA 304
           LASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F NEIQAQNLLANA
Sbjct: 263 LASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKFHNEIQAQNLLANA 322

Query: 305 E 306
           +
Sbjct: 323 D 323

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BLAST of HG10001419 vs. NCBI nr
Match: KAG6570744.1 (hypothetical protein SDJN03_29659, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543.5 bits (1399), Expect = 1.2e-150
Identity = 261/301 (86.71%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 5   IFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFA 64
           I FLFS LQ LF  LP+LEA PL+NTRLFREYIGA+G N+RFSDVPIHPDVEFHFILSFA
Sbjct: 6   IIFLFSFLQLLFPTLPSLEATPLDNTRLFREYIGADGNNVRFSDVPIHPDVEFHFILSFA 65

Query: 65  IDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKP 124
           IDY  +SSPSATNGKF+VFWDE+ LSPSSVSSIKA+HSNVKFALSLGGDT GK+FA+FKP
Sbjct: 66  IDYTAASSPSATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKP 125

Query: 125 KSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFA 184
           KSITSWVKNAF+SIS +VKEY LDG+DIDYEHFKAHPD FTEC+G+LLLRLKRQNVISFA
Sbjct: 126 KSITSWVKNAFESISRIVKEYDLDGVDIDYEHFKAHPDVFTECMGKLLLRLKRQNVISFA 185

Query: 185 SIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKV 244
           SIAPF+DD +Q+HYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHF+TQ+SNY+GGKV
Sbjct: 186 SIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFETQTSNYQGGKV 245

Query: 245 LASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANA 304
           LASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F NEIQAQNLLANA
Sbjct: 246 LASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKFHNEIQAQNLLANA 305

Query: 305 E 306
           +
Sbjct: 306 D 306

[Close]

BLAST of HG10001419 vs. NCBI nr
Match: XP_022146270.1 (chitinase 2-like [Momordica charantia])

HSP 1 Score: 542.7 bits (1397), Expect = 2.0e-150
Identity = 264/305 (86.56%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 1   MDSPIFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFI 60
           M S IFFLFS+LQFL  ILP+LEAAP NNTRLFREYIGA+G N+RFSDVP+HPDVEFHFI
Sbjct: 19  MGSRIFFLFSLLQFLSAILPSLEAAPKNNTRLFREYIGADG-NVRFSDVPVHPDVEFHFI 78

Query: 61  LSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFA 120
           LSFAIDY G SSPSATNGKF+VFWDE+NLSPSSVSSIKA+HSN+KFA+SLGGDTVGKEFA
Sbjct: 79  LSFAIDYTGLSSPSATNGKFRVFWDEQNLSPSSVSSIKARHSNIKFAVSLGGDTVGKEFA 138

Query: 121 HFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNV 180
           +FKPKS+ SWVKNAFKSIS +VKEY LDG+DIDYEHFKA PDTFTECIGQLLLRLK  NV
Sbjct: 139 YFKPKSVKSWVKNAFKSISRIVKEYHLDGVDIDYEHFKADPDTFTECIGQLLLRLKHHNV 198

Query: 181 ISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYE 240
           ISFASIAPFEDDT+QSHYLALWRKYG LIDYVNFQFY+Y KGTTVSQF+NHF TQSSNY+
Sbjct: 199 ISFASIAPFEDDTVQSHYLALWRKYGHLIDYVNFQFYSYDKGTTVSQFVNHFKTQSSNYQ 258

Query: 241 GGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNL 300
           GG VLASFATDGSGGLTPEKGFFKACS LQSRG+LHGIFVWSADDSKKN+FR+E QAQNL
Sbjct: 259 GGNVLASFATDGSGGLTPEKGFFKACSILQSRGELHGIFVWSADDSKKNNFRHEKQAQNL 318

Query: 301 LANAE 306
           LANAE
Sbjct: 319 LANAE 322

[Close]

BLAST of HG10001419 vs. NCBI nr
Match: XP_023511994.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540.8 bits (1392), Expect = 7.5e-150
Identity = 260/301 (86.38%), Postives = 282/301 (93.69%), Query Frame = 0


Query: 5   IFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFA 64
           I FLFS LQ LF  LP+LEA PL+NTRLFREYIGA+G N+RFSDVPIHPDVEFHFILSFA
Sbjct: 6   IIFLFSFLQLLFPTLPSLEATPLDNTRLFREYIGADGNNVRFSDVPIHPDVEFHFILSFA 65

Query: 65  IDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKP 124
           IDY  SSSPSATNGKF+V WD++ LSPSSVSSIKA+HSNVKFALSLGGDT GK+FA+FKP
Sbjct: 66  IDYTASSSPSATNGKFRVSWDKQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKP 125

Query: 125 KSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFA 184
           KSITSWVKNAF+SIS +VKEY +DG+DIDYEHFKAHPD FTECIG+LLLRLKRQNVISFA
Sbjct: 126 KSITSWVKNAFESISRIVKEYDIDGVDIDYEHFKAHPDVFTECIGKLLLRLKRQNVISFA 185

Query: 185 SIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKV 244
           SIAPF+DD +QSHYLALWRKYGDLIDYVNFQFYAYGKGTTVS+FLNHF+TQ+SNY+GGKV
Sbjct: 186 SIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSEFLNHFETQTSNYQGGKV 245

Query: 245 LASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANA 304
           LASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F NEIQAQNLLANA
Sbjct: 246 LASFATDGSGGLTPEKGFFKACKTLQSRGKLHGIFVWSADDSKKNKFHNEIQAQNLLANA 305

Query: 305 E 306
           +
Sbjct: 306 D 306

[Close]

BLAST of HG10001419 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.6e-105
Identity = 183/296 (61.82%), Postives = 228/296 (77.03%), Query Frame = 0


Query: 10  SVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFAIDYMG 69
           S+L   F +L  L   PL +  +FREYIG++  +++FSDVPI+PDV+FHFIL+FAIDY  
Sbjct: 8   SLLLLFFALLSPL--LPLTSALVFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTS 67

Query: 70  SSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKPKSITS 129
            SSP+ TNG FK FWD  NLSPS V+++K  HSNVK +LSLGGD+VG +   F P S++S
Sbjct: 68  GSSPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGGKNVFFSPSSVSS 127

Query: 130 WVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFASIAPF 189
           WV+NA  S++ ++K+Y LDGIDIDYEHFK  P+TF ECIGQL+ RLK+  V+SF SIAPF
Sbjct: 128 WVENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPF 187

Query: 190 EDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKVLASFA 249
           +D  +QSHY ALW KYG  IDYVNFQFYAY   T+V QFL +F+ QSSNY GGKVL SF+
Sbjct: 188 DDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFS 247

Query: 250 TDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDS--KKNDFRNEIQAQNLLAN 304
           TD SGGL P+ GFF+ACS L+ +GKLHGIFVWSADDS    N FR E+QAQ++LA+
Sbjct: 248 TDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLAS 301

[Close]

BLAST of HG10001419 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98
Identity = 172/274 (62.77%), Postives = 212/274 (77.37%), Query Frame = 0


Query: 32  LFREYIGAEGINIRFSDVPIHPDVEFHFILSFAIDYMGSSSPSATNGKFKVFWDEENLSP 91
           LFREYIGA+  +++FSDVPI+P+V+FHFIL+FAIDY   SSP+ TNG F  FWD  NLSP
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSP 61

Query: 92  SSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKPKSITSWVKNAFKSISHVVKEYGLDGID 151
           S V++IK  ++NVK ++SLGG++VG E   F P S++SWV NA  S++ ++K+Y LDGID
Sbjct: 62  SQVAAIKRTYNNVKVSVSLGGNSVGGERVFFNPSSVSSWVDNAVSSLTKIIKQYHLDGID 121

Query: 152 IDYEHFKAHPDTFTECIGQLLLRLKRQNVISFASIAPFEDDTIQSHYLALWRKYGDLIDY 211
           IDYEHFK  P+TF ECIGQL+ RLK+  V+SF SIAPF+D  +QSHY ALW KYG  IDY
Sbjct: 122 IDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDY 181

Query: 212 VNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACSTLQS 271
           VNFQFY Y    +V QFL +F+ Q SNY GGKVL SF+TD SGGL P  GFF ACS L+ 
Sbjct: 182 VNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKK 241

Query: 272 RGKLHGIFVWSADDS-KKND-FRNEIQAQNLLAN 304
           +GKLHGIFVWSADDS   ND F+ E+QAQ+LLA+
Sbjct: 242 QGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275

[Close]

BLAST of HG10001419 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.9e-19
Identity = 59/188 (31.38%), Postives = 87/188 (46.28%), Query Frame = 0


Query: 31  RLFREYIGAEGINIRFSDVPIHPDVEFHFILSFAIDYMGSSSPSATNGKFKVFWDEENLS 90
           ++FRE+   +      + V      EF   LS A DY G++S   TNGKF  +WD E ++
Sbjct: 6   KVFREFTSDDSF---LNQVIPENITEFQVTLSLARDYDGNNS---TNGKFIPYWDTEKVT 65

Query: 91  PSSVSSIKAKHS----NVKFALSLGGDTVGKEFAHFKPKSITSWVKNAFKSISHVVKEYG 150
           P  +   K K+      VK  +S+G       F      +  +WV  A  S+  ++K Y 
Sbjct: 66  PEVIKKFKKKYEPTALRVKVLVSIGNKNKQFPFTIGSDSNSEAWVSEATASLKSIIKTYN 125

Query: 151 LDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFASIAPFEDDTIQSHYLALWRKYG 210
           LDGID+ YE   A+   F   +G L+  LK+  +I+ AS A   D      Y  L+ +Y 
Sbjct: 126 LDGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYA 185

Query: 211 DLIDYVNF 215
              D V F
Sbjct: 186 TFFDTVVF 187

[Close]

BLAST of HG10001419 vs. ExPASy TrEMBL
Match: A0A6J1FUT9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 262/301 (87.04%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 5   IFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFA 64
           IFFLFS L  LF  LP+LEA PL+NTRLFREYIGA+G N+RFSDVPIHPDVEFHFILSFA
Sbjct: 23  IFFLFSFLPLLFPTLPSLEATPLDNTRLFREYIGADGNNVRFSDVPIHPDVEFHFILSFA 82

Query: 65  IDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKP 124
           IDY  SSSPSATNGKF+VFWDE+ LSPSSVSSIKA+HSNVKFALSLGGDT GK+FA+FKP
Sbjct: 83  IDYTASSSPSATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKP 142

Query: 125 KSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFA 184
           KSITSWVKNAF+SIS +VKEY +DG+DIDYEHFKAHPD FTECIG+LLLRLKRQNVISFA
Sbjct: 143 KSITSWVKNAFESISRIVKEYDIDGVDIDYEHFKAHPDVFTECIGKLLLRLKRQNVISFA 202

Query: 185 SIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKV 244
           SIAPF+DD +Q+HYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHF+TQ+SNY+GGKV
Sbjct: 203 SIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFETQTSNYQGGKV 262

Query: 245 LASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANA 304
           LASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F NEIQAQNLLANA
Sbjct: 263 LASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKFHNEIQAQNLLANA 322

Query: 305 E 306
           +
Sbjct: 323 D 323

[Close]

BLAST of HG10001419 vs. ExPASy TrEMBL
Match: A0A6J1CWU0 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.6e-151
Identity = 264/305 (86.56%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 1   MDSPIFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFI 60
           M S IFFLFS+LQFL  ILP+LEAAP NNTRLFREYIGA+G N+RFSDVP+HPDVEFHFI
Sbjct: 19  MGSRIFFLFSLLQFLSAILPSLEAAPKNNTRLFREYIGADG-NVRFSDVPVHPDVEFHFI 78

Query: 61  LSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFA 120
           LSFAIDY G SSPSATNGKF+VFWDE+NLSPSSVSSIKA+HSN+KFA+SLGGDTVGKEFA
Sbjct: 79  LSFAIDYTGLSSPSATNGKFRVFWDEQNLSPSSVSSIKARHSNIKFAVSLGGDTVGKEFA 138

Query: 121 HFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNV 180
           +FKPKS+ SWVKNAFKSIS +VKEY LDG+DIDYEHFKA PDTFTECIGQLLLRLK  NV
Sbjct: 139 YFKPKSVKSWVKNAFKSISRIVKEYHLDGVDIDYEHFKADPDTFTECIGQLLLRLKHHNV 198

Query: 181 ISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYE 240
           ISFASIAPFEDDT+QSHYLALWRKYG LIDYVNFQFY+Y KGTTVSQF+NHF TQSSNY+
Sbjct: 199 ISFASIAPFEDDTVQSHYLALWRKYGHLIDYVNFQFYSYDKGTTVSQFVNHFKTQSSNYQ 258

Query: 241 GGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNL 300
           GG VLASFATDGSGGLTPEKGFFKACS LQSRG+LHGIFVWSADDSKKN+FR+E QAQNL
Sbjct: 259 GGNVLASFATDGSGGLTPEKGFFKACSILQSRGELHGIFVWSADDSKKNNFRHEKQAQNL 318

Query: 301 LANAE 306
           LANAE
Sbjct: 319 LANAE 322

[Close]

BLAST of HG10001419 vs. ExPASy TrEMBL
Match: A0A5D3CQZ2 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00970 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.8e-150
Identity = 265/306 (86.60%), Postives = 282/306 (92.16%), Query Frame = 0


Query: 1   MDSPIFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFI 60
           M S IFFLFS L FLF ILP+++A PL NTRLFREYIGAE  N+RFSDVPIH DVEFHFI
Sbjct: 1   MGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 60

Query: 61  LSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKE-F 120
           LSFAIDY GSSSPS TNGKFKVFWDE+NL+PSS+SSIKAKHSNVKFALSLGGDTVG   F
Sbjct: 61  LSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIF 120

Query: 121 AHFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQN 180
             FKPKSITSWV NAFKSIS +VKEY LDG+DIDYEHFKA PDTFTECIGQLL RLK QN
Sbjct: 121 VFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASPDTFTECIGQLLQRLKSQN 180

Query: 181 VISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNY 240
           +ISFASIAPF+DDT+QSHY+ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNHFDTQSSNY
Sbjct: 181 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDTQSSNY 240

Query: 241 EGGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQN 300
           EGGKVLASFATDGSGGL PEKGFFKAC+TLQSRG+LHGIFVWSADDSKKN+FRNEIQAQN
Sbjct: 241 EGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNFRNEIQAQN 300

Query: 301 LLANAE 306
           LLANAE
Sbjct: 301 LLANAE 306

[Close]

BLAST of HG10001419 vs. ExPASy TrEMBL
Match: A0A1S3CLR6 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.8e-150
Identity = 265/306 (86.60%), Postives = 282/306 (92.16%), Query Frame = 0


Query: 1   MDSPIFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFI 60
           M S IFFLFS L FLF ILP+++A PL NTRLFREYIGAE  N+RFSDVPIH DVEFHFI
Sbjct: 19  MGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 78

Query: 61  LSFAIDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKE-F 120
           LSFAIDY GSSSPS TNGKFKVFWDE+NL+PSS+SSIKAKHSNVKFALSLGGDTVG   F
Sbjct: 79  LSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIF 138

Query: 121 AHFKPKSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQN 180
             FKPKSITSWV NAFKSIS +VKEY LDG+DIDYEHFKA PDTFTECIGQLL RLK QN
Sbjct: 139 VFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASPDTFTECIGQLLQRLKSQN 198

Query: 181 VISFASIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNY 240
           +ISFASIAPF+DDT+QSHY+ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNHFDTQSSNY
Sbjct: 199 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDTQSSNY 258

Query: 241 EGGKVLASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQN 300
           EGGKVLASFATDGSGGL PEKGFFKAC+TLQSRG+LHGIFVWSADDSKKN+FRNEIQAQN
Sbjct: 259 EGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNFRNEIQAQN 318

Query: 301 LLANAE 306
           LLANAE
Sbjct: 319 LLANAE 324

[Close]

BLAST of HG10001419 vs. ExPASy TrEMBL
Match: A0A6J1JFC6 (chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 259/301 (86.05%), Postives = 281/301 (93.36%), Query Frame = 0


Query: 5   IFFLFSVLQFLFVILPTLEAAPLNNTRLFREYIGAEGINIRFSDVPIHPDVEFHFILSFA 64
           IFFLFS LQ LF  LP+LEA PL+NTRLFREYIGA+G N+RFSDVPIHP+VE HFILSFA
Sbjct: 6   IFFLFSFLQLLFPTLPSLEATPLDNTRLFREYIGADGNNVRFSDVPIHPEVELHFILSFA 65

Query: 65  IDYMGSSSPSATNGKFKVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAHFKP 124
           IDY  SSSPSATN KF+VFWD++ LSPSSVSSIKA+HSN+KFALSLGGDTVGK+FA+FKP
Sbjct: 66  IDYTASSSPSATNEKFRVFWDDQILSPSSVSSIKAQHSNIKFALSLGGDTVGKQFAYFKP 125

Query: 125 KSITSWVKNAFKSISHVVKEYGLDGIDIDYEHFKAHPDTFTECIGQLLLRLKRQNVISFA 184
           KSITSWVKNAF+SIS +VKEY LDG+DIDYEHFKAHPD FTECIG+LLLRLK QNVISFA
Sbjct: 126 KSITSWVKNAFESISRIVKEYDLDGVDIDYEHFKAHPDVFTECIGKLLLRLKHQNVISFA 185

Query: 185 SIAPFEDDTIQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKV 244
           SIAPF+DD +QSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHF+TQ+SNY+GGKV
Sbjct: 186 SIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFETQTSNYQGGKV 245

Query: 245 LASFATDGSGGLTPEKGFFKACSTLQSRGKLHGIFVWSADDSKKNDFRNEIQAQNLLANA 304
           LASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F NEIQAQNLLAN 
Sbjct: 246 LASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKFHNEIQAQNLLANT 305

Query: 305 E 306
           +
Sbjct: 306 D 306

The following BLAST results are available for this feature:

BLAST of HG10001419 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902883.1	2.1e-152	88.93	chitinase 2-like [Benincasa hispida]	[more]
XP_022944087.1	4.0e-151	87.04	chitinase 2-like [Cucurbita moschata]	[more]
KAG6570744.1	1.2e-150	86.71	hypothetical protein SDJN03_29659, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022146270.1	2.0e-150	86.56	chitinase 2-like [Momordica charantia]	[more]
XP_023511994.1	7.5e-150	86.38	chitinase 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10001419 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	2.6e-105	61.82	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	1.1e-98	62.77	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	4.9e-19	31.38	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of HG10001419 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUT9	1.9e-151	87.04	chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1	[more]
A0A6J1CWU0	9.6e-151	86.56	chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1	[more]
A0A5D3CQZ2	4.8e-150	86.60	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G0097...	[more]
A0A1S3CLR6	4.8e-150	86.60	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1	[more]
A0A6J1JFC6	1.4e-149	86.05	chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1	[more]

BLAST of HG10001419 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 77..92 score: 32.81 coord: 30..43 score: 42.86 coord: 264..283 score: 35.0 coord: 94..112 score: 43.86
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 30..304 e-value: 2.8E-88 score: 298.0
None	No IPR available	PANTHER	PTHR46476:SF3	CHITINASE 2	coord: 7..304
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 7..304
None	No IPR available	CDD	cd06544	GH18_narbonin	coord: 32..286 e-value: 2.98837E-128 score: 364.0
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 59..227 e-value: 7.1E-17 score: 62.1
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 31..305 score: 24.567774
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 147..155
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 31..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001419.1	HG10001419.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds