HG10001369 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001369
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CASP-like protein
Location	Chr09: 16495106 .. 16496575 (+)
RNA-Seq Expression	HG10001369
Synteny	HG10001369

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCGAGCCATGGATCAGTTCATCCGGTGGAGGAAACTCCGACGACCGATGTCGGAGACGTCGCACCGATAGTGAGAATGAAGGACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCATCCAGTTAGGCTTCGCAGTTGCTGCTTTTGCTGTCATGGCCGCCTCCCACGACTTTCCTTCCGTCTCTGCATTTAGGTGATTTTTCATTGACTCGATCAATTTCTTCGTTTCCTTTAATTCCGTCGAATTCTTATTCTGACTTGTTTGATAACATATTAATAAACGCCAATGAATTTTTTTTTTTCAAATTTGACCTTGCAAGACACTTTCCATATGAATTTCAGTTTTAGCCACTCGCATCCAGAGAATCCCTTAAATCTAATACGCTACTAAATTTCCAGTAATTTCATAGTTAATTTCTACGTGCGATCGTTGTTGTGAATTTCTTCAATCGTCACGTCTGAATGGGCTTAACTATTGAGTGCTTTGCATTTTCTACTGGATAACATGCCAGATACTGATACACTCCACGTTTTTCTTTGCATCAGCTACCTTGTCGCAGCTGCCAGTTTGCAGGGTTTATGGAGTCTTGCCCTAGCAGTTATAGACATTTATGCTCTTTTAGTGAAGCGGACCTTGCAAAATCGCCCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGGTAAGTTCATTTAAGACATATCTCCATCTGAAACCAATTGTGGCTCGTTGAAATGCTCTTATAATCTACTTCTGTTTGTCCATTTTAACGGTTAAGAAATCGACAATCAAAGATGAATAGAAAACGTTAAACAATAGATAATCAACACAGAGATTTATGTGGTTCACTAACAGTGTGTTAACTACGTCCACAGGTAGAGGGAGAGTAGCTTATTATTAGAGAGCACAATTCAGATTACATATTAATGCGATAGTTTAAATGCACTTCTCTAAACTCTAGGGTCAAAATCATAAATAAGATAAATACAGTTGTCCATACTTGGTCGTTCGAAGTGCTTGATAACATATTCAAGACATTCCAACATTAACTTCTCTTTGTATAAACATTTCTTGCCATATTCAGTAATAATATGAGTAAGATAGTGAGAAATAAAGCTACCAATTACCAATGTTTTAAGCTGAATCTTCTGAACCATGTTGATAACTTTACCATTATTTCCATCATCAAATTTTGAGTAAAATGGGATTGCTATGTCGGCTACAAACAGTGAAATAGTTGCCTGTCTTGTCTTCTCCTGCAGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTTGACCTTTGTTCTGTGAACAAGTGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACCACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTTGCATCGCGATAA

mRNA sequence

ATGAACGCGAGCCATGGATCAGTTCATCCGGTGGAGGAAACTCCGACGACCGATGTCGGAGACGTCGCACCGATAGTGAGAATGAAGGACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCATCCAGTTAGGCTTCGCAGTTGCTGCTTTTGCTGTCATGGCCGCCTCCCACGACTTTCCTTCCGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCAGTTTGCAGGGTTTATGGAGTCTTGCCCTAGCAGTTATAGACATTTATGCTCTTTTAGTGAAGCGGACCTTGCAAAATCGCCCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTTGACCTTTGTTCTGTGAACAAGTGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACCACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTTGCATCGCGATAA

Coding sequence (CDS)

ATGAACGCGAGCCATGGATCAGTTCATCCGGTGGAGGAAACTCCGACGACCGATGTCGGAGACGTCGCACCGATAGTGAGAATGAAGGACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCTCTTCGCTGCATCCAGTTAGGCTTCGCAGTTGCTGCTTTTGCTGTCATGGCCGCCTCCCACGACTTTCCTTCCGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCAGTTTGCAGGGTTTATGGAGTCTTGCCCTAGCAGTTATAGACATTTATGCTCTTTTAGTGAAGCGGACCTTGCAAAATCGCCCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTTGACCTTTGTTCTGTGAACAAGTGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACCACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTTGCATCGCGATAA

Protein sequence

MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAASHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR

Homology

[Close]

BLAST of HG10001369 vs. NCBI nr
Match: XP_008463948.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0035346.1 CASP-like protein 5A2 [Cucumis melo var. makuwa] >TYK14291.1 CASP-like protein 5A2 [Cucumis melo var. makuwa])

HSP 1 Score: 331.6 bits (849), Expect = 4.1e-87
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALRCIQLGFAVAAF+VMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAASLQGLWS ALA+IDIYALLVKRTLQNRPIVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. NCBI nr
Match: XP_038900719.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 327.8 bits (839), Expect = 5.9e-86
Identity = 169/178 (94.94%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEETPTTDVGDVAP+VRMKDIEGMPGTRGGLALR IQLGFAVAAFA+MAA
Sbjct: 1   MNGSHGSVHPVEETPTTDVGDVAPMVRMKDIEGMPGTRGGLALRGIQLGFAVAAFAIMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAASLQGLWS ALAVIDIYALLVKRTL NRPIVSFFAVGDGITTTL
Sbjct: 61  SSDFPSVSAFSYLVAAASLQGLWSFALAVIDIYALLVKRTLHNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQ QSATAMAFLCWF+TLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQFQSATAMAFLCWFSTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. NCBI nr
Match: XP_004145743.1 (CASP-like protein 5A2 [Cucumis sativus] >KGN46840.1 hypothetical protein Csa_020761 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALRCIQLGFA+AAF+VMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAIAAFSVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DF SVSAFSYLVAAASLQG+WS ALA+ID YALLVKRTLQNR IVSFFAVGDGITTTL
Sbjct: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDTYALLVKRTLQNRSIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. NCBI nr
Match: XP_022140364.1 (CASP-like protein 5A2 [Momordica charantia])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 162/178 (91.01%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MNAS+ SV PVEETPTTD GD APIVRMKDIEGMPGTRGGLALRC Q GFAVAAFAVMAA
Sbjct: 1   MNASNASVQPVEETPTTDGGD-APIVRMKDIEGMPGTRGGLALRCFQFGFAVAAFAVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAA LQGLWSL+LAVIDIYALLVKR+LQNRPIVSFFAVGDG+TTTL
Sbjct: 61  SSDFPSVSAFSYLVAAAGLQGLWSLSLAVIDIYALLVKRSLQNRPIVSFFAVGDGVTTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLI+NDLDLCSVN CVQLQSATAMAFLCWF TLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLINNDLDLCSVNDCVQLQSATAMAFLCWFITLPSFFFNFWSLASR 177

[Close]

BLAST of HG10001369 vs. NCBI nr
Match: XP_023512454.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010631.1 CASP-like protein 5A2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79
Identity = 159/178 (89.33%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           M+AS  SVHPVEETP TDVGDVAPIV MK+IEGMPGTRGGLALRC QLGFA AAF VMAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DF SVSAFSYLVAAA LQGLWS  LAVIDIYALLVKR L NRPIV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of HG10001369 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-58
Identity = 119/180 (66.11%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MNASHGSVHPVEETP--TTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVM 60
           MN SH SVHPVE+ P   T+V +  P VRM D+EGMPGT  GLALR  Q  FA AA  VM
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITT 120
           A++ DFPSV+AF YLVAA  LQ LWSLALA++D+YA++VKR+LQNR +VS FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ WF  LPSF FN+WSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of HG10001369 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 111/177 (62.71%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           M AS  +VHPVE  P  D  +    V MKD+ GMPGT GGL LR  Q  FA  A AVMA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           ++DFPSV++F +LVAAA LQ LWS +LA++DIYALLVKR L+NR  V  FA+GDGIT  L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           TF+AACA +GITVLIDNDLDLCS N C   +SATAMAFL WF   PSF  N+WS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of HG10001369 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 116/178 (65.17%), Postives = 132/178 (74.16%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SH +VHPV E P TDV   AP VRMKD +GMPGT GGLALR  Q  FAV AF++M +
Sbjct: 1   MNPSHPAVHPV-EAPPTDVHH-APRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLS 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           + DF +V+AF YLVAA  LQ LWSLALAVID YALLVKR+L+N  +VS F VGDG+T TL
Sbjct: 61  TDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACA AGITVLI NDL  C  N C + ++ATAMAFL WF   PSF   +W LASR
Sbjct: 121 TFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of HG10001369 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 106/178 (59.55%), Postives = 129/178 (72.47%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           M AS  +VHPVE  P TD  +    V MKD+ GMPGT GGL LR  Q  FA  A AVMA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           + DFPSV+AF YLVAA  +Q LWS +LA++DIYALLVKR L+NR  V  FA+GDGIT  L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TF AAC+ AGITVLIDNDL++C+ N C   ++ATA+AF+ WF   PSF  N+WS+A+R
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of HG10001369 vs. ExPASy Swiss-Prot
Match: P0DI69 (CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.6e-47
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MNASH +VHPV   P    G + P +RMK+I+GMPGT GGL LR  Q  FA+ AF++M +
Sbjct: 1   MNASHPAVHPVGVPPAV-AGQLPPRMRMKEIQGMPGTIGGLLLRLGQFCFALVAFSIMVS 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
             +F +V+AF YLVAA  LQ LWSLALA+ID YALLVKR+L+N  +VS   VGDG+T TL
Sbjct: 61  IENFSTVTAFCYLVAATVLQCLWSLALAIIDGYALLVKRSLRNSLLVSLLVVGDGVTATL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACA AGITVLI NDL  C  N C + ++ATA+AFL WF    SF   +W LA+R
Sbjct: 121 TFAAACASAGITVLIGNDLRQCKENHCARYETATALAFLSWFMVSLSFILTFWLLATR 177

[Close]

BLAST of HG10001369 vs. ExPASy TrEMBL
Match: A0A1S3CKE0 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALRCIQLGFAVAAF+VMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAASLQGLWS ALA+IDIYALLVKRTLQNRPIVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. ExPASy TrEMBL
Match: A0A5D3CR88 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00140 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALRCIQLGFAVAAF+VMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAASLQGLWS ALA+IDIYALLVKRTLQNRPIVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. ExPASy TrEMBL
Match: A0A0A0KAS5 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MN SHGSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALRCIQLGFA+AAF+VMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAIAAFSVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DF SVSAFSYLVAAASLQG+WS ALA+ID YALLVKRTLQNR IVSFFAVGDGITTTL
Sbjct: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDTYALLVKRTLQNRSIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of HG10001369 vs. ExPASy TrEMBL
Match: A0A6J1CFI4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111011058 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 162/178 (91.01%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           MNAS+ SV PVEETPTTD GD APIVRMKDIEGMPGTRGGLALRC Q GFAVAAFAVMAA
Sbjct: 1   MNASNASVQPVEETPTTDGGD-APIVRMKDIEGMPGTRGGLALRCFQFGFAVAAFAVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DFPSVSAFSYLVAAA LQGLWSL+LAVIDIYALLVKR+LQNRPIVSFFAVGDG+TTTL
Sbjct: 61  SSDFPSVSAFSYLVAAAGLQGLWSLSLAVIDIYALLVKRSLQNRPIVSFFAVGDGVTTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLI+NDLDLCSVN CVQLQSATAMAFLCWF TLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLINNDLDLCSVNDCVQLQSATAMAFLCWFITLPSFFFNFWSLASR 177

[Close]

BLAST of HG10001369 vs. ExPASy TrEMBL
Match: A0A6J1FWR8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 158/178 (88.76%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAA 60
           M+AS  SVHPVEETP TDVGDVAPIV MK+IEGMPGTRGGLALRC QLGFA AAF VMAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120
           S DF SVSAFSYLVAAA LQGLWS  LAV+DIYALLVKR L NRPIV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of HG10001369 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 119/180 (66.11%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MNASHGSVHPVEETP--TTDVGDVAPIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVM 60
           MN SH SVHPVE+ P   T+V +  P VRM D+EGMPGT  GLALR  Q  FA AA  VM
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITT 120
           A++ DFPSV+AF YLVAA  LQ LWSLALA++D+YA++VKR+LQNR +VS FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ WF  LPSF FN+WSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of HG10001369 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 177.6 bits (449), Expect = 9.1e-45
Identity = 97/179 (54.19%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MNASHGSVHPVEETPTTDVGDV--APIVRMKDIEGMPGTRGGLALRCIQLGFAVAAFAVM 60
           MN S  ++HPV+  P          P VRMKD++GMPGT GGL LR  Q   A+ + +VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  AASHDFPSVSAFSYLVAAASLQGLWSLALAVIDIYALLVKRTLQNRPIVSFFAVGDGITT 120
             + DF S +AF  LV A SLQ LWSL+L +ID YALLV+R+L+N  +V  F +GDG+T+
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           TLTFAAA A AGITVLI NDL  C+VN C + ++ATAMAF+ WF   PSF  N+WSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of HG10001369 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAASHDFPSVSAFSYLVAAASLQGLWSLAL 87
           M DI G PGT  GL LR  Q  FA  + + M  S  F S +AF YL+AA  LQ +WS  L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 88  AVIDIYALLVKRTLQNRPIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-K 147
           A++D +AL+ K+TL +  +VS F VGD +T+TL+ A A + AGITVL   DL  CS   +
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 148 CVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           C + Q + A+AFLCW T   S     W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of HG10001369 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 64/153 (41.83%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAASHDFPSVSAFSYLVAAASLQGLWSLAL 87
           MK + G PGT  GL LR  Q   A A+  VM ++ +F   +AF YL+A+  LQ LWS  L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 88  AVIDIYALLVKRTLQNRPIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNK- 147
           A +D+YAL  K+ LQN  +VS F VGD +T  L+ AAAC+ AG+ VL + D+  C+    
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 148 --CVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
             C++ + A A++F+ W     S    +W LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of HG10001369 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFAVMAASHDFPSVSAFSYLVAAASLQGLWSLAL 87
           MK + G PGT  GL LR  Q   A A+  VM +S+DF + +AF +LVA+  LQ +WS  L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 88  AVIDIYALLVKRTLQNRPIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-- 147
           A +D+YA+  K  L++  ++S F VGD +T  L  AAAC+ AG+TVL   D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 148 -KCVQLQSATAMAFLCWFTTLPSFFFNYWSL 176
             C + Q +  ++F  WF    S    +W L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of HG10001369 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463948.1	4.1e-87	94.38	PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-...	[more]
XP_038900719.1	5.9e-86	94.94	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_004145743.1	1.1e-84	92.13	CASP-like protein 5A2 [Cucumis sativus] >KGN46840.1 hypothetical protein Csa_020...	[more]
XP_022140364.1	2.2e-80	91.01	CASP-like protein 5A2 [Momordica charantia]	[more]
XP_023512454.1	1.8e-79	89.33	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like prote...	[more]

BLAST of HG10001369 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	1.4e-58	66.11	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
Q10Q78	3.0e-53	62.71	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI70	1.7e-51	65.17	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
P0DI68	1.1e-50	59.55	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
P0DI69	5.6e-47	58.43	CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1	[more]

BLAST of HG10001369 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKE0	2.0e-87	94.38	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1	[more]
A0A5D3CR88	2.0e-87	94.38	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001...	[more]
A0A0A0KAS5	5.3e-85	92.13	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1	[more]
A0A6J1CFI4	1.0e-80	91.01	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111011058 PE=3 SV=1	[more]
A0A6J1FWR8	1.5e-79	88.76	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1	[more]

BLAST of HG10001369 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	1.0e-59	66.11	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	9.1e-45	54.19	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	1.9e-26	47.02	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	4.0e-24	41.83	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	4.9e-22	39.74	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 35..162 e-value: 3.2E-24 score: 85.4
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 16..178
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 16..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001369.1	HG10001369.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane