HG10001270 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001270
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ribosomal protein
Location	Chr09: 15584107 .. 15585542 (+)
RNA-Seq Expression	HG10001270
Synteny	HG10001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTTCAGAGCGATGCGTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCTTAGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTCGCACGTTGAAGAGGTAAACTTTATCTCCTCTTACCATCTTCACTTGTCACATTCAGTAACTAATTGTCCTTGGTTCTTTTCCCTTAAAAGAGATGACTACTAGCTTGTATGTTCCTTGCTTGTTCGAGTTTGGCTTACTATGAAATGTATGAAAAAACTCAACAGTAGTAACATTTAGATGAAGTTCATAGTTTACAGCATATTCAAATTGTATTTTACTGTTTAATAGGCATGGTGCTGAATTCTTCATTCATAGTATGAGTGAATTTGTACTAATTCTTTGTTCATACATGGTAGATTGAAATTAAAGACTCTTACACTTCCGCTCTGGTCTTTTACTGAATGTGTGTGCTCGCTTATTATAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCTTCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTATGCTTATGACTAATAGACATCTGGATTTTACCTTTTATCTGGTGACTCAGGTTAGAAAGTTTTTCTTAGCTCCATGGATTGTTGTTTACAGTGGTGATAATAGCAAAAGTTACAACTTGGTACTTCATTTTCTTTTTTCTGTTTAAGCTTATCATTGGCTGCGCACTTGAATTTTTAATTTCAATTTTTTCTTTTGAAGAATCCAACTGTTTTGTTTGTAGTTCGTACTAACATTGACATTGTCATTACAGGAAAGTTCCCTACCCTCGTCACTCACCAAGAAACTCTCGAATCTAAAGTAAACGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTTGCCATGGAAGAGAAGCAAGTTTTCCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTAAGTCACTGGCCAAAATTTTCCACCATGTTATTTTAGTTCGGTTTTCTATTTATGTGCTGAGCGTACTCAAGACTGTCTTATTTCACAACTAACACAATTTAGAAATGCTCTCTACACTTGATGAAACATTGTCCTTTTATCTTATCTAAATAATAATATGATTTTTGTTGTTCATCAGGTTAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGA

mRNA sequence

AAACTTCAGAGCGATGCGTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCTTAGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTCGCACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCTTCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAATGGTGATAATAGCAAAAGTTACAACTTGAATCCAACTGTTTTGTTTGTAGTTCGTACTAACATTGACATTGTCATTACAGGAAAGTTCCCTACCCTCGTCACTCACCAAGAAACTCTCGAATCTAAAGTAAACGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTTGCCATGGAAGAGAAGCAAGTTTTCCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTTAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGA

Coding sequence (CDS)

AAACTTCAGAGCGATGCGTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCTTAGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTCGCACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCTTCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAATGGTGATAATAGCAAAAGTTACAACTTGAATCCAACTGTTTTGTTTGTAGTTCGTACTAACATTGACATTGTCATTACAGGAAAGTTCCCTACCCTCGTCACTCACCAAGAAACTCTCGAATCTAAAGTAAACGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTTGCCATGGAAGAGAAGCAAGTTTTCCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTTAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGA

Protein sequence

KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

[Close]

BLAST of HG10001270 vs. NCBI nr
Match: KAA0033405.1 (60S ribosomal protein L10a [Cucumis melo var. makuwa])

HSP 1 Score: 417.2 bits (1071), Expect = 1.0e-112
Identity = 218/251 (86.85%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIFADS EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKS---------YNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLES 180
           LGPGLNKAGNGD   +         +     + F    +I+I+ITGKFPTLVTHQE+LES
Sbjct: 123 LGPGLNKAGNGDEVNASLTFYFMIYFLFKLKLEFCTNVDIEIMITGKFPTLVTHQESLES 182

Query: 181 KVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL 240
           KVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL
Sbjct: 183 KVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL 242

Query: 241 KSTMGKAYRVF 243
           KSTMGKAYRVF
Sbjct: 243 KSTMGKAYRVF 253

[Close]

BLAST of HG10001270 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 6.9e-106
Identity = 209/242 (86.36%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIFADS EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. NCBI nr
Match: XP_022943718.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal protein L10a [Cucurbita moschata] >XP_022985885.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_022985886.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_023513214.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 2.0e-105
Identity = 208/242 (85.95%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ALREAISSIF DSSEKKRNFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPRL
Sbjct: 63  KICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 392.1 bits (1006), Expect = 3.4e-105
Identity = 207/242 (85.54%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIF DS+EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQETLESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQETLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKS+MGK+YR
Sbjct: 183 KFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSSMGKSYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. NCBI nr
Match: XP_022958674.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023532799.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 205/242 (84.71%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ALREAISSIF DS+EKKRNFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           K+CMLGDA HVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPRL
Sbjct: 63  KLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98
Identity = 188/242 (77.69%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           K+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98
Identity = 188/242 (77.69%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           K+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.0e-97
Identity = 186/242 (76.86%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+A+REAI++I   S  KKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIPRL
Sbjct: 63  KICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLV+HQE+LESKVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVSHQESLESKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQR 216

Query: 241 VF 243
           +F
Sbjct: 243 IF 216

[Close]

BLAST of HG10001270 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.0e-96
Identity = 188/243 (77.37%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSE-KKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 60
           KLQS+A+REAISSI     E K RNFTET+ELQIGLKNYDPQKDKRFSGSVKLPH+PRPK
Sbjct: 3   KLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPK 62

Query: 61  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 120
           MKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQIPR
Sbjct: 63  MKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIPR 122

Query: 121 LLGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAM 180
           LLGPGLNKA                            GKFPTLV+HQE+LESKVNETKA 
Sbjct: 123 LLGPGLNKA----------------------------GKFPTLVSHQESLESKVNETKAT 182

Query: 181 VKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 240
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 183 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 217

Query: 241 RVF 243
           RVF
Sbjct: 243 RVF 217

[Close]

BLAST of HG10001270 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.7e-96
Identity = 185/242 (76.45%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIPRL
Sbjct: 63  KICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLV+HQE+LE+KVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVSHQESLEAKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQR 216

Query: 241 VF 243
           +F
Sbjct: 243 IF 216

[Close]

BLAST of HG10001270 vs. ExPASy TrEMBL
Match: A0A5A7SW61 (60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00570 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.8e-113
Identity = 218/251 (86.85%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIFADS EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKS---------YNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLES 180
           LGPGLNKAGNGD   +         +     + F    +I+I+ITGKFPTLVTHQE+LES
Sbjct: 123 LGPGLNKAGNGDEVNASLTFYFMIYFLFKLKLEFCTNVDIEIMITGKFPTLVTHQESLES 182

Query: 181 KVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL 240
           KVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL
Sbjct: 183 KVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYL 242

Query: 241 KSTMGKAYRVF 243
           KSTMGKAYRVF
Sbjct: 243 KSTMGKAYRVF 253

[Close]

BLAST of HG10001270 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106
Identity = 209/242 (86.36%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIFADS EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106
Identity = 209/242 (86.36%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQSDALREAISSIFADS EKKR FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL
Sbjct: 63  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.7e-106
Identity = 208/242 (85.95%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ALREAISSIF DSSEKKRNFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPRL
Sbjct: 63  KICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. ExPASy TrEMBL
Match: A0A6J1FXB0 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.7e-106
Identity = 208/242 (85.95%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+ALREAISSIF DSSEKKRNFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPRL
Sbjct: 63  KICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLVTHQE+LESKVNETKAMV
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVTHQESLESKVNETKAMV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 183 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 216

Query: 241 VF 243
           VF
Sbjct: 243 VF 216

[Close]

BLAST of HG10001270 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 354.8 bits (909), Expect = 5.7e-98
Identity = 186/242 (76.86%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+A+REAI++I   S  KKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIPRL
Sbjct: 63  KICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLV+HQE+LESKVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVSHQESLESKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQR 216

Query: 241 VF 243
           +F
Sbjct: 243 IF 216

[Close]

BLAST of HG10001270 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-97
Identity = 188/243 (77.37%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSE-KKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 60
           KLQS+A+REAISSI     E K RNFTET+ELQIGLKNYDPQKDKRFSGSVKLPH+PRPK
Sbjct: 3   KLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPK 62

Query: 61  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 120
           MKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQIPR
Sbjct: 63  MKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIPR 122

Query: 121 LLGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAM 180
           LLGPGLNKA                            GKFPTLV+HQE+LESKVNETKA 
Sbjct: 123 LLGPGLNKA----------------------------GKFPTLVSHQESLESKVNETKAT 182

Query: 181 VKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 240
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 183 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 217

Query: 241 RVF 243
           RVF
Sbjct: 243 RVF 217

[Close]

BLAST of HG10001270 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-97
Identity = 188/243 (77.37%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSE-KKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 60
           KLQS+A+REAISSI     E K RNFTET+ELQIGLKNYDPQKDKRFSGSVKLPH+PRPK
Sbjct: 3   KLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPK 62

Query: 61  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 120
           MKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQIPR
Sbjct: 63  MKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIPR 122

Query: 121 LLGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAM 180
           LLGPGLNKA                            GKFPTLV+HQE+LESKVNETKA 
Sbjct: 123 LLGPGLNKA----------------------------GKFPTLVSHQESLESKVNETKAT 182

Query: 181 VKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 240
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 183 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 217

Query: 241 RVF 243
           RVF
Sbjct: 243 RVF 217

[Close]

BLAST of HG10001270 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-97
Identity = 185/242 (76.45%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIPRL
Sbjct: 63  KICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLV+HQE+LE+KVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVSHQESLEAKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQR 216

Query: 241 VF 243
           +F
Sbjct: 243 IF 216

[Close]

BLAST of HG10001270 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-97
Identity = 185/242 (76.45%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   KLQSDALREAISSIFADSSEKKRNFTETLELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 60
           KLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM
Sbjct: 3   KLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62

Query: 61  KICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 120
           KICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIPRL
Sbjct: 63  KICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRL 122

Query: 121 LGPGLNKAGNGDNSKSYNLNPTVLFVVRTNIDIVITGKFPTLVTHQETLESKVNETKAMV 180
           LGPGLNKA                            GKFPTLV+HQE+LE+KVNETKA V
Sbjct: 123 LGPGLNKA----------------------------GKFPTLVSHQESLEAKVNETKATV 182

Query: 181 KFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 240
           KFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R
Sbjct: 183 KFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQR 216

Query: 241 VF 243
           +F
Sbjct: 243 IF 216

The following BLAST results are available for this feature:

BLAST of HG10001270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033405.1	1.0e-112	86.85	60S ribosomal protein L10a [Cucumis melo var. makuwa]	[more]
XP_008458587.1	6.9e-106	86.36	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom...	[more]
XP_022943718.1	2.0e-105	85.95	60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal pr...	[more]
XP_038893874.1	3.4e-105	85.54	60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro...	[more]
XP_022958674.1	1.3e-104	84.71	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosom...	[more]

BLAST of HG10001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	1.9e-98	77.69	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.9e-98	77.69	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	8.0e-97	76.86	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	4.0e-96	77.37	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
P59230	6.7e-96	76.45	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of HG10001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SW61	4.8e-113	86.85	60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KEW8	3.4e-106	86.36	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]
A0A1S3C7Q8	3.4e-106	86.36	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1	[more]
A0A6J1JCI3	9.7e-106	85.95	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]
A0A6J1FXB0	9.7e-106	85.95	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1	[more]

BLAST of HG10001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	5.7e-98	76.86	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.8e-97	77.37	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	2.8e-97	77.37	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	4.8e-97	76.45	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	4.8e-97	76.45	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..151 e-value: 3.0E-26 score: 90.1 coord: 154..242 e-value: 8.1E-17 score: 59.2
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 21..236 e-value: 1.8E-37 score: 129.1
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 7..241 e-value: 5.94784E-57 score: 178.532
None	No IPR available	GENE3D	3.30.190.20		coord: 161..240 e-value: 8.0E-21 score: 76.3 coord: 1..117 e-value: 1.8E-34 score: 120.4
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 1..135
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 156..240
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 156..240
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 1..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 3..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001270.1	HG10001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome