Homology
BLAST of HG10001188 vs. NCBI nr
Match:
XP_038902098.1 (pentatricopeptide repeat-containing protein At5g27110 [Benincasa hispida])
HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 553/690 (80.14%), Postives = 573/690 (83.04%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
M LLSAL+TCASSKLLKQGKL+HQKIFSLGFQSNI LCKTLIGFYFSCHDYRSAELVFQT
Sbjct: 4 MILLSALRTCASSKLLKQGKLIHQKIFSLGFQSNIVLCKTLIGFYFSCHDYRSAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
N SPLDVSLWNALLSA TKNF FVEALQLF QLNCHS+VRPDCYTYPVVLKACGGLGRVV
Sbjct: 64 NGSPLDVSLWNALLSAYTKNFGFVEALQLFDQLNCHSHVRPDCYTYPVVLKACGGLGRVV 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHLIKTGLIWDVFVGSS+MNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF
Sbjct: 124 YGRRIHNHLIKTGLIWDVFVGSSLMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
KDDKAETALKMFDKMKELGFEPNSVTFTV VSSCTRLLNLERGKEI RELIDRG LLDAF
Sbjct: 184 KDDKAETALKMFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEIHRELIDRGILLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCG EMAKE+FEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGYFEMAKEIFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTLTTLTSII+AS
Sbjct: 304 TKPTLTTLTSIIHASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TIFRNISKNEVVSWNVMISGYVMVGNHIQALRIYDNMKEHHVKPDAITFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
AL+KGRELHHCIISHKLE+N+IVMGALLDMYAKCGDVD+A KLFHQLPKRDLVSWTSMI
Sbjct: 424 ALEKGRELHHCIISHKLETNEIVMGALLDMYAKCGDVDDAWKLFHQLPKRDLVSWTSMIT 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGYKYFNEMI Q +IK
Sbjct: 484 AYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYKYFNEMIAQ-NIK 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
IE YSCLIDLLGRAGRLHEAYEILQRSKETR DIGLLSTLFSACRLHNDFVLG+QIGK
Sbjct: 544 ASIEHYSCLIDLLGRAGRLHEAYEILQRSKETRKDIGLLSTLFSACRLHNDFVLGVQIGK 603
BLAST of HG10001188 vs. NCBI nr
Match:
TYJ96117.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 538/690 (77.97%), Postives = 571/690 (82.75%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI LCK+LIGFYFSCHDY SAELVFQT
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNILLCKSLIGFYFSCHDYASAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
N+ PLDVSLWN+LLSA T NFRFVEALQLF QLNC+S+VRPD YTYPVVLKACGGLGRV+
Sbjct: 64 NECPLDVSLWNSLLSAYTNNFRFVEALQLFDQLNCNSHVRPDFYTYPVVLKACGGLGRVI 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
KD KAETALK FDKMKELGFEPNSVTFTV VSSCTRLLNL+RGKEI RELIDR LLDAF
Sbjct: 184 KDGKAETALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLKRGKEIHRELIDRRILLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTLTTLTSI+YAS
Sbjct: 304 TKPTLTTLTSIVYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TIFRSISKNEVVSWNVMVSGYVMVGNHIQALRIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEA+KLFHQLPKRDLVSWTSMI+
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEAQKLFHQLPKRDLVSWTSMIS 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQKSNV+ADSV FLAVLSACSHAGLVDEGY YFNEMI+QYDIK
Sbjct: 484 AYGSHGQASEALRLFDEMQKSNVRADSVAFLAVLSACSHAGLVDEGYTYFNEMIVQYDIK 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEILQRSKET++DIGLLSTLFSACRLHNDFVLGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETKSDIGLLSTLFSACRLHNDFVLGIQIGK 603
BLAST of HG10001188 vs. NCBI nr
Match:
XP_004140282.1 (pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativus] >KGN48106.1 hypothetical protein Csa_003806 [Cucumis sativus])
HSP 1 Score: 1070.1 bits (2766), Expect = 6.9e-309
Identity = 538/690 (77.97%), Postives = 565/690 (81.88%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI L K+LIGFYFSCHDY SAELVFQT
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA T NFRFVEALQLF QLNC+SYVRPD YTYPVVLKACGGLGRV+
Sbjct: 64 NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
KD KAE ALK FDKMKELGFEPNSVTFTV VSSCTRLLNLERGKE+ RELI+R LLDAF
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFE+IPRKN ITWNAMITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTL TLTSIIYAS
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMI
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQK NV+ADSVTFLAVLSACSHAGLVDEGY YFNEM++QYDIK
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEILQRSKETR+DIGLLSTLFSAC LHN+FVLGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGK 603
BLAST of HG10001188 vs. NCBI nr
Match:
XP_023513314.1 (pentatricopeptide repeat-containing protein At5g27110 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1059.3 bits (2738), Expect = 1.2e-305
Identity = 531/690 (76.96%), Postives = 559/690 (81.01%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
MTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELVFQT
Sbjct: 4 MTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLGRVV
Sbjct: 64 NDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVV 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDE PQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEIPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNL RGKEI RELIDR LLDAF
Sbjct: 184 QDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLGRGKEIHRELIDRSVLLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTLTTLTSIIYAS
Sbjct: 304 TKPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TVFRNVSKHEVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTSMI
Sbjct: 424 ALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMIT 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QYDI+
Sbjct: 484 AYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIR 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGI+IGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIKIGK 603
BLAST of HG10001188 vs. NCBI nr
Match:
KAG7010290.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1058.9 bits (2737), Expect = 1.6e-305
Identity = 531/690 (76.96%), Postives = 559/690 (81.01%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
MTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELVFQT
Sbjct: 4 MTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLGRVV
Sbjct: 64 NDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVV 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDE PQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEIPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LLDAF
Sbjct: 184 QDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRMN EG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNCEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
++PTLTTLTSIIYAS
Sbjct: 304 TEPTLTTLTSIIYASSRSIQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TVFRNVSKNEVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTSMI
Sbjct: 424 ALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMIT 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QYDI+
Sbjct: 484 AYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIR 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGK 603
BLAST of HG10001188 vs. ExPASy Swiss-Prot
Match:
O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)
HSP 1 Score: 627.5 bits (1617), Expect = 1.6e-178
Identity = 320/686 (46.65%), Postives = 446/686 (65.01%), Query Frame = 0
Query: 3 LLSALKTCA-SSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTN 62
LLS L+ C S+K L++ KL+HQ+I +LG + ++ LCK+LI YF+C D+ SA VF+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 63 DSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVY 122
D DV +WN+L+S +KN F + L++F +L S PD +T+P V+KA G LGR
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 123 GRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFK 182
GR IH ++K+G + DV V SS++ MYAK + F +++ +FDE P+RDV WNTVISC+++
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 183 DDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFV 242
+AE AL++F +M+ GFEPNSV+ TVA+S+C+RLL LERGKEI R+ + +G LD +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 243 LSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGS 302
SALVDMYGKC CLE+A+EVF+++PRK+ + WN+MI GY KGDS+SC+E+L RM EG+
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 303 KPTLTTLTSIIYASS--------------------------------------------- 362
+P+ TTLTSI+ A S
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 363 -------------------------------------------------STLPACSQLAA 422
S LPACSQLAA
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 423 LDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAA 482
L+KG+++H I +LE++++++ ALLDMY+KCG+ EA ++F+ +PK+D+VSWT MI+A
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 483 YGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKP 542
YGSHGQ EAL FDEMQK ++ D VT LAVLSAC HAGL+DEG K+F++M +Y I+P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 543 GIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKM 594
IE YSC+ID+LGRAGRL EAYEI+Q++ ET ++ LLSTLFSAC LH + LG +I ++
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
BLAST of HG10001188 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 380.6 bits (976), Expect = 3.4e-104
Identity = 212/579 (36.61%), Postives = 321/579 (55.44%), Query Frame = 0
Query: 2 TLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTN 61
TL S + C++ L +G+ LH LGF SN + L+ Y C D +A L +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA-LDYFLE 450
Query: 62 DSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVY 121
+V LWN +L A + ++F Q+ V P+ YTYP +LK C LG +
Sbjct: 451 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLEL 510
Query: 122 GRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFK 181
G +IH+ +IKT + +V S +++MYAK + A ++ F +DV W T+I+ Y +
Sbjct: 511 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 570
Query: 182 DDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFV 241
+ + AL F +M + G + V T AVS+C L L+ G++I + G D
Sbjct: 571 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 630
Query: 242 LSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGS 301
+ALV +Y +CG +E + FEQ + I WNA+++G+ G++ + + +RMN EG
Sbjct: 631 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 690
Query: 302 KPTLTTLTSIIYASSSTLPACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCG 361
T S + A+S T A + +G+++H I +S V AL+ MYAKCG
Sbjct: 691 DNNNFTFGSAVKAASET-------ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 750
Query: 362 DVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLS 421
+ +A K F ++ ++ VSW ++I AY HG SEAL FD+M SNV+ + VT + VLS
Sbjct: 751 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 810
Query: 422 ACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRND 481
ACSH GLVD+G YF M +Y + P E Y C++D+L RAG L A E +Q + D
Sbjct: 811 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ-EMPIKPD 870
Query: 482 IGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRK 541
+ TL SAC +H + +G L+E++P+D +TY+LLSN+YA KW+ R+K
Sbjct: 871 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 930
Query: 542 MREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYE 581
M+E G+KK PG SWIE+ IH F+V D+++PLAD ++E
Sbjct: 931 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
BLAST of HG10001188 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 2.4e-102
Identity = 211/656 (32.16%), Postives = 338/656 (51.52%), Query Frame = 0
Query: 7 LKTCASSKLLK-QGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVF----QTN 66
L +C SKL + +H + GF + I + LI Y C VF Q N
Sbjct: 26 LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85
Query: 67 --------------------DS------PLDVSLWNALLSANTKNFRFVEALQLFHQLNC 126
DS D WN+++S ++ R EAL F ++
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 127 HSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFH 186
+V + Y++ VL AC GL + G ++H+ + K+ + DV++GS++++MY+KC +
Sbjct: 146 EGFVLNE-YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 205
Query: 187 DAINLFDEFPQRDVGCWNTVISCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCT 246
DA +FDE R+V WN++I+C+ ++ A AL +F M E EP+ VT +S+C
Sbjct: 206 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 265
Query: 247 RLLNLERGKEIQRELIDRGTLLDAFVLS-ALVDMYGKCGCLEMAKEVFEQIP-------- 306
L ++ G+E+ ++ L + +LS A VDMY KC ++ A+ +F+ +P
Sbjct: 266 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 325
Query: 307 -----------------------RKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKP 366
+N ++WNA+I GY+ G++ + L + E P
Sbjct: 326 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 385
Query: 367 TLTTLTSIIYASSSTLPACSQLAALDKGRELHHCIISHKL------ESNKIVMGALLDMY 426
T Y+ ++ L AC+ LA L G + H ++ H E + V +L+DMY
Sbjct: 386 T-------HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 445
Query: 427 AKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFL 486
KCG V+E +F ++ +RD VSW +MI + +G +EAL LF EM +S + D +T +
Sbjct: 446 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 505
Query: 487 AVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKE 546
VLSAC HAG V+EG YF+ M + + P + Y+C++DLLGRAG L EA +++
Sbjct: 506 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE-EMP 565
Query: 547 TRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCK 594
+ D + +L +AC++H + LG + + L+E++P + Y+LLSNMYA + KWE+V
Sbjct: 566 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 625
BLAST of HG10001188 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 373.2 bits (957), Expect = 5.3e-102
Identity = 193/558 (34.59%), Postives = 320/558 (57.35%), Query Frame = 0
Query: 18 QGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTNDSPLDVSLWNALLSAN 77
Q K +H ++ LG Q + L LI S D A VF P + WNA++
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP-QIFPWNAIIRGY 95
Query: 78 TKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWD 137
++N F +AL ++ + + V PD +T+P +LKAC GL + GR +H + + G D
Sbjct: 96 SRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 155
Query: 138 VFVGSSMMNMYAKCDQFHDAINLFD--EFPQRDVGCWNTVISCYFKDDKAETALKMFDKM 197
VFV + ++ +YAKC + A +F+ P+R + W ++S Y ++ + AL++F +M
Sbjct: 156 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 215
Query: 198 KELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALVDMYGKCGCL 257
+++ +P+ V +++ T L +L++G+ I ++ G ++ +L +L MY KCG +
Sbjct: 216 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 275
Query: 258 EMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKPTLTTLTSIIYAS 317
AK +F+++ N I WNAMI+GY+ G +R I++ M ++ +P ++TS I
Sbjct: 276 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI--- 335
Query: 318 SSTLPACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPK 377
AC+Q+ +L++ R ++ + + + AL+DM+AKCG V+ AR +F +
Sbjct: 336 ----SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 395
Query: 378 RDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKY 437
RD+V W++MI YG HG+A EA+ L+ M++ V + VTFL +L AC+H+G+V EG+ +
Sbjct: 396 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 455
Query: 438 FNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLH 497
FN M + I P + Y+C+IDLLGRAG L +AYE++ + + + + L SAC+ H
Sbjct: 456 FNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVI-KCMPVQPGVTVWGALLSACKKH 515
Query: 498 NDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSW 557
LG + L IDP + Y+ LSN+YA+ W+ V +VR +M+E GL K+ GCSW
Sbjct: 516 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 575
Query: 558 IEINQRIHPFFVEDKSNP 574
+E+ R+ F V DKS+P
Sbjct: 576 VEVRGRLEAFRVGDKSHP 582
BLAST of HG10001188 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 372.9 bits (956), Expect = 7.0e-102
Identity = 203/599 (33.89%), Postives = 337/599 (56.26%), Query Frame = 0
Query: 2 TLLSALKTCASSKLLKQGKLLHQKIFSLGFQS---NIPLCKTLIGFYFSCHDYRSAELVF 61
TL+S + C S+ + +G ++ +++ + G + N + TL+ Y S++++
Sbjct: 201 TLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 260
Query: 62 QTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGR 121
+ D+ WN +LS+ +N + +EAL+ ++ V PD +T VL AC L
Sbjct: 261 GSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEM 320
Query: 122 VVYGRRIHNHLIKTG-LIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 181
+ G+ +H + +K G L + FVGS++++MY C Q +FD R +G WN +I+
Sbjct: 321 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 380
Query: 182 CYFKDDKAETALKMFDKMKE-LGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 241
Y +++ + AL +F M+E G NS T V +C R R + I ++ RG
Sbjct: 381 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 440
Query: 242 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 301
D FV + L+DMY + G +++A +F ++ ++ +TWN MITGY + LL +M
Sbjct: 441 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 500
Query: 302 NDEGSKPTLTTLTSIIYASSST----LPACSQLAALDKGRELHHCIISHKLESNKIVMGA 361
+ K + + +S T LP+C+ L+AL KG+E+H I + L ++ V A
Sbjct: 501 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 560
Query: 362 LLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQAD 421
L+DMYAKCG + +RK+F Q+P++++++W +I AYG HG EA+ L M V+ +
Sbjct: 561 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 620
Query: 422 SVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEIL 481
VTF++V +ACSH+G+VDEG + F M Y ++P + Y+C++DLLGRAGR+ EAY+++
Sbjct: 621 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 680
Query: 482 QRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKW 541
N G S+L A R+HN+ +G + LI+++P+ S Y+LL+N+Y+S W
Sbjct: 681 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 740
Query: 542 EEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYECLNILACHMEK 592
++ +VRR M+E G++K PGCSWIE +H F D S+P ++ + L L M K
Sbjct: 741 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
BLAST of HG10001188 vs. ExPASy TrEMBL
Match:
A0A5D3BAG7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00800 PE=4 SV=1)
HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 538/690 (77.97%), Postives = 571/690 (82.75%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI LCK+LIGFYFSCHDY SAELVFQT
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNILLCKSLIGFYFSCHDYASAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
N+ PLDVSLWN+LLSA T NFRFVEALQLF QLNC+S+VRPD YTYPVVLKACGGLGRV+
Sbjct: 64 NECPLDVSLWNSLLSAYTNNFRFVEALQLFDQLNCNSHVRPDFYTYPVVLKACGGLGRVI 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
KD KAETALK FDKMKELGFEPNSVTFTV VSSCTRLLNL+RGKEI RELIDR LLDAF
Sbjct: 184 KDGKAETALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLKRGKEIHRELIDRRILLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTLTTLTSI+YAS
Sbjct: 304 TKPTLTTLTSIVYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TIFRSISKNEVVSWNVMVSGYVMVGNHIQALRIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEA+KLFHQLPKRDLVSWTSMI+
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEAQKLFHQLPKRDLVSWTSMIS 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQKSNV+ADSV FLAVLSACSHAGLVDEGY YFNEMI+QYDIK
Sbjct: 484 AYGSHGQASEALRLFDEMQKSNVRADSVAFLAVLSACSHAGLVDEGYTYFNEMIVQYDIK 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEILQRSKET++DIGLLSTLFSACRLHNDFVLGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETKSDIGLLSTLFSACRLHNDFVLGIQIGK 603
BLAST of HG10001188 vs. ExPASy TrEMBL
Match:
A0A0A0KK21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432790 PE=4 SV=1)
HSP 1 Score: 1070.1 bits (2766), Expect = 3.3e-309
Identity = 538/690 (77.97%), Postives = 565/690 (81.88%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI L K+LIGFYFSCHDY SAELVFQT
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA T NFRFVEALQLF QLNC+SYVRPD YTYPVVLKACGGLGRV+
Sbjct: 64 NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
KD KAE ALK FDKMKELGFEPNSVTFTV VSSCTRLLNLERGKE+ RELI+R LLDAF
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFE+IPRKN ITWNAMITGYSLKGDSRSCIELLMRMNDEG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
+KPTL TLTSIIYAS
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMI
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEMQK NV+ADSVTFLAVLSACSHAGLVDEGY YFNEM++QYDIK
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEILQRSKETR+DIGLLSTLFSAC LHN+FVLGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGK 603
BLAST of HG10001188 vs. ExPASy TrEMBL
Match:
A0A6J1FXU4 (pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita moschata OX=3662 GN=LOC111448220 PE=4 SV=1)
HSP 1 Score: 1057.4 bits (2733), Expect = 2.3e-305
Identity = 530/690 (76.81%), Postives = 560/690 (81.16%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
MTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELVFQT
Sbjct: 4 MTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLGRVV
Sbjct: 64 NDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVV 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA++LFDE PQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LLDAF
Sbjct: 184 QDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRMN EG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
++PTLTTLTSIIYAS
Sbjct: 304 TEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELHHCIISHKLESN+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTSMI
Sbjct: 424 ALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMIT 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFDEM+KSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QYDI+
Sbjct: 484 AYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIR 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 597
PGIE YSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGIQIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGK 603
BLAST of HG10001188 vs. ExPASy TrEMBL
Match:
A0A6J1JHK4 (pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita maxima OX=3661 GN=LOC111484569 PE=4 SV=1)
HSP 1 Score: 1056.6 bits (2731), Expect = 3.9e-305
Identity = 530/691 (76.70%), Postives = 560/691 (81.04%), Query Frame = 0
Query: 1 MTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQT 60
MTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELVFQT
Sbjct: 4 MTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNLTLCKALIGFYFSCYDYRSAELVFQT 63
Query: 61 NDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVV 120
ND PLDVSLWNALLSA TK+FRFVEALQLF QL HS+VRPDCYTYPVVLKACGGLGRVV
Sbjct: 64 NDCPLDVSLWNALLSAYTKSFRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVV 123
Query: 121 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYF 180
YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDEFPQRDVGCWN VISCYF
Sbjct: 124 YGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEFPQRDVGCWNAVISCYF 183
Query: 181 KDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAF 240
+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LLD F
Sbjct: 184 QDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDDF 243
Query: 241 VLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEG 300
VLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRM+ EG
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMSYEG 303
Query: 301 SKPTLTTLTSIIYAS--------------------------------------------- 360
++PTLTTLTSIIYAS
Sbjct: 304 TEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGSVSSAE 363
Query: 361 -------------------------------------------------SSTLPACSQLA 420
SSTL ACSQLA
Sbjct: 364 TVFRNVSKNEVVSWNVMISGYVMVGNHIQALCVYDNMKEHHVKPDAVTFSSTLSACSQLA 423
Query: 421 ALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIA 480
ALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTSMI
Sbjct: 424 ALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMIT 483
Query: 481 AYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIK 540
AYGSHGQASEALRLFD MQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QYDI+
Sbjct: 484 AYGSHGQASEALRLFDAMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIR 543
Query: 541 PGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGK 598
PGIE YSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LG QIGK
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGKQIGK 603
BLAST of HG10001188 vs. ExPASy TrEMBL
Match:
A0A6J1DJC4 (pentatricopeptide repeat-containing protein At5g27110 OS=Momordica charantia OX=3673 GN=LOC111020588 PE=4 SV=1)
HSP 1 Score: 1013.8 bits (2620), Expect = 2.9e-292
Identity = 512/688 (74.42%), Postives = 551/688 (80.09%), Query Frame = 0
Query: 3 LLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTND 62
LLSAL+TCASSKLLKQGKL+HQ+IFS GFQS+I LCKTLI FY SCHDYRSAELVF+T
Sbjct: 6 LLSALRTCASSKLLKQGKLIHQRIFSSGFQSHIALCKTLIDFYSSCHDYRSAELVFETTC 65
Query: 63 SPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYG 122
LDVSLWNALLSA TKNF FVEALQL+ QL CHS VRPDCYTYPVVLKACGGLGRVV G
Sbjct: 66 CSLDVSLWNALLSAYTKNFMFVEALQLYDQLKCHSEVRPDCYTYPVVLKACGGLGRVVCG 125
Query: 123 RRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFKD 182
RR+H+HLIKTGLIWDVFV SS+MNMY KC +FH AINLFDE P RDVGCWNTVISCYF+D
Sbjct: 126 RRVHSHLIKTGLIWDVFVSSSLMNMYVKCGRFHYAINLFDEMPHRDVGCWNTVISCYFQD 185
Query: 183 DKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVL 242
DKAETALKMFD+MK+ GFEPNSVTFT+ +SSCTRLLNLE+GKEI RELIDR LLDAFVL
Sbjct: 186 DKAETALKMFDEMKDSGFEPNSVTFTIVISSCTRLLNLEKGKEIHRELIDRRVLLDAFVL 245
Query: 243 SALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSK 302
SALVD+YGKCGCLEMAKEVFEQIPRKN ITWN+MITGYSL GDSRSCIELL RM D G+K
Sbjct: 246 SALVDLYGKCGCLEMAKEVFEQIPRKNAITWNSMITGYSLTGDSRSCIELLKRMTDAGTK 305
Query: 303 PTLTTLTSIIYAS----------------------------------------------- 362
PTLTTLTSII AS
Sbjct: 306 PTLTTLTSIISASSRSAQPRHGKFIHGFILRNGMNSDIFIDVSLIDLYFKCGYVYSAETI 365
Query: 363 -----------------------------------------------SSTLPACSQLAAL 422
SSTL ACSQLAAL
Sbjct: 366 FRNISKNEVVSWNVMISGYVLVGNHIQALRVYDNMKEHDVKPDAVTFSSTLSACSQLAAL 425
Query: 423 DKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAY 482
+KGRELH+CIISHKLE+N+IVMGALLDM+AKCGDVDEARKLF QLP+RDLVSWT+MI AY
Sbjct: 426 EKGRELHNCIISHKLETNEIVMGALLDMFAKCGDVDEARKLFLQLPERDLVSWTTMITAY 485
Query: 483 GSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPG 542
GSHGQASEALRLFDEMQKSNV ADSVTFLAVLSACSHAGLVDEGYKYFN+MIIQYDIKPG
Sbjct: 486 GSHGQASEALRLFDEMQKSNVGADSVTFLAVLSACSHAGLVDEGYKYFNKMIIQYDIKPG 545
Query: 543 IEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKML 597
IE YSCLIDLLGRAGRLHEAYEILQRS++TRN IGLLSTLFSACRL NDFVLGI+IGKM+
Sbjct: 546 IEHYSCLIDLLGRAGRLHEAYEILQRSEDTRNHIGLLSTLFSACRLRNDFVLGIEIGKMI 605
BLAST of HG10001188 vs. TAIR 10
Match:
AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 627.5 bits (1617), Expect = 1.1e-179
Identity = 320/686 (46.65%), Postives = 446/686 (65.01%), Query Frame = 0
Query: 3 LLSALKTCA-SSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTN 62
LLS L+ C S+K L++ KL+HQ+I +LG + ++ LCK+LI YF+C D+ SA VF+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 63 DSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVY 122
D DV +WN+L+S +KN F + L++F +L S PD +T+P V+KA G LGR
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 123 GRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFK 182
GR IH ++K+G + DV V SS++ MYAK + F +++ +FDE P+RDV WNTVISC+++
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 183 DDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFV 242
+AE AL++F +M+ GFEPNSV+ TVA+S+C+RLL LERGKEI R+ + +G LD +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 243 LSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGS 302
SALVDMYGKC CLE+A+EVF+++PRK+ + WN+MI GY KGDS+SC+E+L RM EG+
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 303 KPTLTTLTSIIYASS--------------------------------------------- 362
+P+ TTLTSI+ A S
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 363 -------------------------------------------------STLPACSQLAA 422
S LPACSQLAA
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 423 LDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAA 482
L+KG+++H I +LE++++++ ALLDMY+KCG+ EA ++F+ +PK+D+VSWT MI+A
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 483 YGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKP 542
YGSHGQ EAL FDEMQK ++ D VT LAVLSAC HAGL+DEG K+F++M +Y I+P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 543 GIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKM 594
IE YSC+ID+LGRAGRL EAYEI+Q++ ET ++ LLSTLFSAC LH + LG +I ++
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
BLAST of HG10001188 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 380.6 bits (976), Expect = 2.4e-105
Identity = 212/579 (36.61%), Postives = 321/579 (55.44%), Query Frame = 0
Query: 2 TLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTN 61
TL S + C++ L +G+ LH LGF SN + L+ Y C D +A L +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA-LDYFLE 450
Query: 62 DSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVY 121
+V LWN +L A + ++F Q+ V P+ YTYP +LK C LG +
Sbjct: 451 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLEL 510
Query: 122 GRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFK 181
G +IH+ +IKT + +V S +++MYAK + A ++ F +DV W T+I+ Y +
Sbjct: 511 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 570
Query: 182 DDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFV 241
+ + AL F +M + G + V T AVS+C L L+ G++I + G D
Sbjct: 571 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 630
Query: 242 LSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGS 301
+ALV +Y +CG +E + FEQ + I WNA+++G+ G++ + + +RMN EG
Sbjct: 631 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 690
Query: 302 KPTLTTLTSIIYASSSTLPACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCG 361
T S + A+S T A + +G+++H I +S V AL+ MYAKCG
Sbjct: 691 DNNNFTFGSAVKAASET-------ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 750
Query: 362 DVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLS 421
+ +A K F ++ ++ VSW ++I AY HG SEAL FD+M SNV+ + VT + VLS
Sbjct: 751 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 810
Query: 422 ACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRND 481
ACSH GLVD+G YF M +Y + P E Y C++D+L RAG L A E +Q + D
Sbjct: 811 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ-EMPIKPD 870
Query: 482 IGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRK 541
+ TL SAC +H + +G L+E++P+D +TY+LLSN+YA KW+ R+K
Sbjct: 871 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 930
Query: 542 MREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYE 581
M+E G+KK PG SWIE+ IH F+V D+++PLAD ++E
Sbjct: 931 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
BLAST of HG10001188 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 374.4 bits (960), Expect = 1.7e-103
Identity = 211/656 (32.16%), Postives = 338/656 (51.52%), Query Frame = 0
Query: 7 LKTCASSKLLK-QGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVF----QTN 66
L +C SKL + +H + GF + I + LI Y C VF Q N
Sbjct: 26 LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85
Query: 67 --------------------DS------PLDVSLWNALLSANTKNFRFVEALQLFHQLNC 126
DS D WN+++S ++ R EAL F ++
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 127 HSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFH 186
+V + Y++ VL AC GL + G ++H+ + K+ + DV++GS++++MY+KC +
Sbjct: 146 EGFVLNE-YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 205
Query: 187 DAINLFDEFPQRDVGCWNTVISCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCT 246
DA +FDE R+V WN++I+C+ ++ A AL +F M E EP+ VT +S+C
Sbjct: 206 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 265
Query: 247 RLLNLERGKEIQRELIDRGTLLDAFVLS-ALVDMYGKCGCLEMAKEVFEQIP-------- 306
L ++ G+E+ ++ L + +LS A VDMY KC ++ A+ +F+ +P
Sbjct: 266 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 325
Query: 307 -----------------------RKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKP 366
+N ++WNA+I GY+ G++ + L + E P
Sbjct: 326 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 385
Query: 367 TLTTLTSIIYASSSTLPACSQLAALDKGRELHHCIISHKL------ESNKIVMGALLDMY 426
T Y+ ++ L AC+ LA L G + H ++ H E + V +L+DMY
Sbjct: 386 T-------HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 445
Query: 427 AKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFL 486
KCG V+E +F ++ +RD VSW +MI + +G +EAL LF EM +S + D +T +
Sbjct: 446 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 505
Query: 487 AVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKE 546
VLSAC HAG V+EG YF+ M + + P + Y+C++DLLGRAG L EA +++
Sbjct: 506 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE-EMP 565
Query: 547 TRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCK 594
+ D + +L +AC++H + LG + + L+E++P + Y+LLSNMYA + KWE+V
Sbjct: 566 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 625
BLAST of HG10001188 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 373.2 bits (957), Expect = 3.8e-103
Identity = 193/558 (34.59%), Postives = 320/558 (57.35%), Query Frame = 0
Query: 18 QGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTNDSPLDVSLWNALLSAN 77
Q K +H ++ LG Q + L LI S D A VF P + WNA++
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP-QIFPWNAIIRGY 95
Query: 78 TKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWD 137
++N F +AL ++ + + V PD +T+P +LKAC GL + GR +H + + G D
Sbjct: 96 SRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 155
Query: 138 VFVGSSMMNMYAKCDQFHDAINLFD--EFPQRDVGCWNTVISCYFKDDKAETALKMFDKM 197
VFV + ++ +YAKC + A +F+ P+R + W ++S Y ++ + AL++F +M
Sbjct: 156 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 215
Query: 198 KELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALVDMYGKCGCL 257
+++ +P+ V +++ T L +L++G+ I ++ G ++ +L +L MY KCG +
Sbjct: 216 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 275
Query: 258 EMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKPTLTTLTSIIYAS 317
AK +F+++ N I WNAMI+GY+ G +R I++ M ++ +P ++TS I
Sbjct: 276 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI--- 335
Query: 318 SSTLPACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPK 377
AC+Q+ +L++ R ++ + + + AL+DM+AKCG V+ AR +F +
Sbjct: 336 ----SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 395
Query: 378 RDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKY 437
RD+V W++MI YG HG+A EA+ L+ M++ V + VTFL +L AC+H+G+V EG+ +
Sbjct: 396 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 455
Query: 438 FNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLH 497
FN M + I P + Y+C+IDLLGRAG L +AYE++ + + + + L SAC+ H
Sbjct: 456 FNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVI-KCMPVQPGVTVWGALLSACKKH 515
Query: 498 NDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSW 557
LG + L IDP + Y+ LSN+YA+ W+ V +VR +M+E GL K+ GCSW
Sbjct: 516 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 575
Query: 558 IEINQRIHPFFVEDKSNP 574
+E+ R+ F V DKS+P
Sbjct: 576 VEVRGRLEAFRVGDKSHP 582
BLAST of HG10001188 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 372.9 bits (956), Expect = 5.0e-103
Identity = 203/599 (33.89%), Postives = 337/599 (56.26%), Query Frame = 0
Query: 2 TLLSALKTCASSKLLKQGKLLHQKIFSLGFQS---NIPLCKTLIGFYFSCHDYRSAELVF 61
TL+S + C S+ + +G ++ +++ + G + N + TL+ Y S++++
Sbjct: 201 TLVSVVTAC-SNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 260
Query: 62 QTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGR 121
+ D+ WN +LS+ +N + +EAL+ ++ V PD +T VL AC L
Sbjct: 261 GSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEM 320
Query: 122 VVYGRRIHNHLIKTG-LIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 181
+ G+ +H + +K G L + FVGS++++MY C Q +FD R +G WN +I+
Sbjct: 321 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 380
Query: 182 CYFKDDKAETALKMFDKMKE-LGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 241
Y +++ + AL +F M+E G NS T V +C R R + I ++ RG
Sbjct: 381 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 440
Query: 242 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 301
D FV + L+DMY + G +++A +F ++ ++ +TWN MITGY + LL +M
Sbjct: 441 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 500
Query: 302 NDEGSKPTLTTLTSIIYASSST----LPACSQLAALDKGRELHHCIISHKLESNKIVMGA 361
+ K + + +S T LP+C+ L+AL KG+E+H I + L ++ V A
Sbjct: 501 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 560
Query: 362 LLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNVQAD 421
L+DMYAKCG + +RK+F Q+P++++++W +I AYG HG EA+ L M V+ +
Sbjct: 561 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 620
Query: 422 SVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEQYSCLIDLLGRAGRLHEAYEIL 481
VTF++V +ACSH+G+VDEG + F M Y ++P + Y+C++DLLGRAGR+ EAY+++
Sbjct: 621 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 680
Query: 482 QRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASVNKW 541
N G S+L A R+HN+ +G + LI+++P+ S Y+LL+N+Y+S W
Sbjct: 681 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 740
Query: 542 EEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYECLNILACHMEK 592
++ +VRR M+E G++K PGCSWIE +H F D S+P ++ + L L M K
Sbjct: 741 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038902098.1 | 0.0e+00 | 80.14 | pentatricopeptide repeat-containing protein At5g27110 [Benincasa hispida] | [more] |
| TYJ96117.1 | 0.0e+00 | 77.97 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_004140282.1 | 6.9e-309 | 77.97 | pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativus] >KGN4810... | [more] |
| XP_023513314.1 | 1.2e-305 | 76.96 | pentatricopeptide repeat-containing protein At5g27110 [Cucurbita pepo subsp. pep... | [more] |
| KAG7010290.1 | 1.6e-305 | 76.96 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O04659 | 1.6e-178 | 46.65 | Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... | [more] |
| Q9SVP7 | 3.4e-104 | 36.61 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| Q9SIT7 | 2.4e-102 | 32.16 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
| Q9LTV8 | 5.3e-102 | 34.59 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
| Q7Y211 | 7.0e-102 | 33.89 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BAG7 | 0.0e+00 | 77.97 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0KK21 | 3.3e-309 | 77.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432790 PE=4 SV=1 | [more] |
| A0A6J1FXU4 | 2.3e-305 | 76.81 | pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1JHK4 | 3.9e-305 | 76.70 | pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1DJC4 | 2.9e-292 | 74.42 | pentatricopeptide repeat-containing protein At5g27110 OS=Momordica charantia OX=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G27110.1 | 1.1e-179 | 46.65 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G13650.1 | 2.4e-105 | 36.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G13600.1 | 1.7e-103 | 32.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G12770.1 | 3.8e-103 | 34.59 | mitochondrial editing factor 22 | [more] |
| AT3G57430.1 | 5.0e-103 | 33.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
