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HG10001164 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGGTATGGATATGATACGACTCTCTTCTTCAATGCAAAATGTTTTGGCTCTTATGGTAACTATTTTGTTTTTGATTTTATGAGCTTAATTTAAAAAATAAAAAACAATAAATGAAATAGTTACCAAACCCGCTTTCATTGTATCATTGTTATCAAATGCTCGTCTCTTCTCCTGGTTCCTGAATGATGAATATTCATGGCACTTGAAATCTGCATTTAAAAAGGGAAGAAAAAATCATTTTACGCTTACAAGAGGCTTTCTATTTGCAGCAAATACAGAATTATTTTACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACCCAATACACATGGTTTTATAAGTAAGTGGAGCCTTTCACTTTAGTTTTTAAGAAGTTAATTCATTATGACTGCCAATGTAAATGCTTACTCTCTGGAAATCAAGACACTGTTTCCAGAACATATTCCATTTCTCCACCTAATCTTGAATTTCATTTTTTTTCCCACATCAAACAGCTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACACTCGTAAAGGTAGTATAACAATCTCTAGAGATGGTAAACCTAAACCAAAGCTTACTTGATTAAGACATAATATCCTCAACCAACACGTTAGGGATTCAAATCCGCACACTCACATGTTAAACTCAAAAGAAAAAGAAAAAAAAGTCTAAAAAAGAGTCTATTTGAGTTACATGAAGGATATGTATATAATTGAGTACTGAACAATAAGATATTGGATGCGTATGTTTATGTGTAACAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGGTAAGAATATGCTTGGTATTTTGAAGACAAATTCTTTGTTGGAACCATTGTAAGAACACATATTGAATTGTGATTTGGTGTTGTTGCATAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGCAAATACAGAATTATTTTACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACCCAATACACATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACACTCGTAAAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGCAAATACAGAATTATTTTACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACCCAATACACATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACACTCGTAAAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLRSSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKMQIQNYFTYKAVKTVLNQLYEMNPTQYTWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKCDHAEIYKEISDENLELMRERLMETVIWPSDE Homology
BLAST of HG10001164 vs. NCBI nr
Match: XP_038902700.1 (chaperonin-like RbcX protein 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 387.9 bits (995), Expect = 5.7e-104 Identity = 196/214 (91.59%), Postives = 203/214 (94.86%), Query Frame = 0
BLAST of HG10001164 vs. NCBI nr
Match: XP_023512052.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103 Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of HG10001164 vs. NCBI nr
Match: XP_022944576.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103 Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of HG10001164 vs. NCBI nr
Match: KAG7010270.1 (Chaperonin-like RbcX protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102 Identity = 190/214 (88.79%), Postives = 200/214 (93.46%), Query Frame = 0
BLAST of HG10001164 vs. NCBI nr
Match: XP_004142113.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN54180.1 hypothetical protein Csa_018190 [Cucumis sativus]) HSP 1 Score: 378.3 bits (970), Expect = 4.5e-101 Identity = 192/214 (89.72%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59 Identity = 124/215 (57.67%), Postives = 156/215 (72.56%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy Swiss-Prot
Match: Q44212 (RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07 Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy Swiss-Prot
Match: O86418 (RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbcX PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06 Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06 Identity = 23/63 (36.51%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy TrEMBL
Match: A0A6J1FUS7 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448989 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103 Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy TrEMBL
Match: A0A0A0KX19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101 Identity = 192/214 (89.72%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy TrEMBL
Match: A0A5A7TJ10 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00620 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101 Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy TrEMBL
Match: A0A5D3BAI6 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001050 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.3e-101 Identity = 189/214 (88.32%), Postives = 199/214 (92.99%), Query Frame = 0
BLAST of HG10001164 vs. ExPASy TrEMBL
Match: A0A1S3BNA7 (uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.3e-101 Identity = 189/214 (88.32%), Postives = 199/214 (92.99%), Query Frame = 0
BLAST of HG10001164 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein ) HSP 1 Score: 230.3 bits (586), Expect = 1.4e-60 Identity = 124/215 (57.67%), Postives = 156/215 (72.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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