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HG10001154 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAACAACAGTTATCCTTACAGTACAGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCCGGTGCCTCACATTCTCAGGTACTATACATCTCTTTGATTTTGGATTCCTTCCATGGATCACTTGTCTGTAAACTAGATTGAAAGAACTCATGGCAATTAAATGCTTCTTTGTCGGTACCTTATATTAAAAAGAAGTTATTTGACTAATTGTTGGCATGAAAATAATTTACTTGTTGCCATGATGAGATCGTGCCTGCATCGACTGTTTCTTTGCTCTGTTGGTTGTTCTTCTTGGATAATCTCTCTATCTCTTTCAAACTTGCTTCTCTCCTTTTTCGGTTTGTTGACTATTGTCCCAAGTAGAAAAAGGGAAAGAAAGCGACATTTCATCTTCTCAACTACTTTTTGGCTTCTGAACTTTGGCCTTTTCATTTTGCTTTAACTTCCTGAGGCATGCCTGTTTGGACATTCATTCTCAAGCTCAAATGGTTTTTAATGTCTGATTTTTATGATTCCAAATGCATAAAATTATTTTCCCAACATGGAAGGATAACATTTTTCATTTCATTCAGGAGACTATTTATCCATCAACTAATTCAAATTACTACAAGTTTGGGCATTCTGATTCTTGGAGTACAGCATACTTTGATGCTCAATCGTTTGAGGTTCAAGGTCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCCAAATGAACAGAGTTTAGGGAATAGAGTGTGGGAAGAAAATGCCAATCCTAATATGTCCAGTAACAGCATGGAATGTAAGGGTTGATATCTGTTTCGTTTCAAATTTTTGAATGAATACTCTAGTATATTTGTTTGTTAAATAGAAGTTTCCAAGTTAAAGTAATGCAACAAACATTCACATATTGAATGTTAACGTTCTATAAAATCACATGCTGCAAAGAAGATAGTTAATGACTCTCTATTTTAATTATTAGTCTATTGTTTTTTCTCAGTTCATGAATTGGGGTATTTGTGAGAAAAAGCAGTTGATGTCATAATTGACCAGCTTCATTTTTAGGCTGTCTATTATTTTTCTCAGTTCAAAACGATAATGTAATATGGTTCTAATGGTTTTCTTATGCTACATGTATAAAAATTGACTTTAGGCATATTAGTCATGTTGTAAGATGGGTATCTTAGTCAATGCAACAAATTGAACTTAGGGTGATTTAACAAGTATCTTGTAAATGAGATACAATCTTTCTCAGTTCATAAACGATAATGTAATATGGGGCTAACGGTTTTCTTATGCTACATGTAGAAAAATTGGCTTTAGGCATATTAGTCATGTTGTTAGATGGGCAACTTATTCAATGCAACAAAATCGAATTTAGGGTGATTTGATGAGTATCCTGTAAATGAGATACAATCACACTAACCATTAATACACATATCTTCTGTCGTATTTCAAAGTTGTAATTACTTGGTTTATCTTATCTTTACCAAGTACTATTCTGATGTAGTATTAACTATGCTGCTAGGTAGAGTATCAAAGATATATATAAAATCTAACAACAAAATCATAATGCAGGAAAATTTTATTTTATATCATTTTAATATTCATGATCGTTTTCCCCTTTACTTCTTTCTGATTCAATTAGAATGTTTATGGAAATTTAAATACCAGTTCCTAAACTCAAGTTTTTTTTATTGCCTTTTCAGGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGGTCTGCAGCTTTTCAATTCATAAACATTTTATGCCTTTAAGTTTTCAGTTGTTGTGTTACTGTAAGGTTGTTGTTGGTGGAGTACCTCACTTTTGGCTTAGTATCCCTGTATTTTGTGGATGTTTATGCTGGCAAATCAGTCACGTGCTTGTGTTAATACATAAAATAAAAATATTCTTGTAGAATATAAAACTGGTTCATCTGAAATCACTGAAAAAGGAAAAGGTTGAGAATATTAGAATACAAATCCATTTCTAGCCCAATGTTGACAGCCTTGGTGGTTGGTGGTTCAACTTCCTTAACATCTATGATTCCATATTTTTTATTCAACGCCAAATAGACCTGGAATTTATTTCCAAACCTCTTTCAGAAGACTTCTATAAATGCATTCCTAACCTTTTCCATTTTGAAATGTGCAGACTATTTGGCAAGATATTGTTGATCCTGATAACATGACTTATGAGGTTAGAGCTGCCGATTTTCTTTCCTATTTACTTTTGCATGTTACTGAACAAAATGTTTTTTCCCGTAAATTTATATGTTCTTATTCAAGCTATGCTTTCTTCAATGTCTATTTATTATATGAATATTGCTAATTGACCTGTTATATTATGGCCGGTTACTAAGAAGTGTTGCTGCTGTATAAGATAATAGCAAAACCAATAGCCATTGCACCGACTAAGCTGAAATTGGGCAGTAGGCTAGGTTTTGGATGCTTTCTTGCTAATGTAGAAAGGAAAGAAATGATGGCACAGATTAACCTAATTGTTTATTCTGCATTCTGGTCGCTGGTACACTTCGACCTAGTTTTCTATCGTTCAACTTGTTTCCTTGGAGGGCCGTACAGTACATATATATATCAAATAAAGCTTGCTTCTTTTGAGGGCTCTGCCTGTTGACGCTGCTTCTTAAGAAACTAAAATATAGTGGATAGGAGGATAAGGAACCAGCTGTAAATCCACTCAATACATTCTGAAACCAAGTTCTTTGTTTAATAAACGTAAAATTTGTCTGGCTAACTGTTATGTATGCCTCCTGAATTATGTCGATTACTCTCTTCTATAGAATGACGGTTTAAAGAAACTTATTTCAGGAATTAGTAGATTTAGGCGAGATGGTAGGAACTCAAAGTAGAGGTCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGTAACACTAGAATGATTGATGGTCTTATCTCATTTTTGAAACTTTTCTTATTTTTCTTTTATTTTTGCCGTTTCTCCATATCTTATGGATATATGTTGAATAATTATCAATTATGCTGCTAGCCTGACTTAGATGTCCTATTTATCCCATCAGCTAACTCAAAGTAGAAGCTGATTGAAATTGGTAATTATATGAGATCTTAGTGAGTCAATTGACTGTTTCGGTGAGCTGTTACATGTTAGATATATGTGCCAAACTAAGGACCTTATAAAAATTAAACTACATGTGCCATTGTCCTAGGAGGCTGTCAGCTGTCTACGCAGACAATGAAGAAGAAAGCAATCTGTAA ATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAACAACAGTTATCCTTACAGTACAGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCCGGTGCCTCACATTCTCAGGAGACTATTTATCCATCAACTAATTCAAATTACTACAAGTTTGGGCATTCTGATTCTTGGAGTACAGCATACTTTGATGCTCAATCGTTTGAGGTTCAAGGTCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCCAAATGAACAGAGTTTAGGGAATAGAGTGTGGGAAGAAAATGCCAATCCTAATATGTCCAGTAACAGCATGGAATGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGACTATTTGGCAAGATATTGTTGATCCTGATAACATGACTTATGAGGAATTAGTAGATTTAGGCGAGATGGTAGGAACTCAAAGTAGAGGTCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGAGGCTGTCAGCTGTCTACGCAGACAATGAAGAAGAAAGCAATCTGTAA ATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAACAACAGTTATCCTTACAGTACAGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCCGGTGCCTCACATTCTCAGGAGACTATTTATCCATCAACTAATTCAAATTACTACAAGTTTGGGCATTCTGATTCTTGGAGTACAGCATACTTTGATGCTCAATCGTTTGAGGTTCAAGGTCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCCAAATGAACAGAGTTTAGGGAATAGAGTGTGGGAAGAAAATGCCAATCCTAATATGTCCAGTAACAGCATGGAATGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGACTATTTGGCAAGATATTGTTGATCCTGATAACATGACTTATGAGGAATTAGTAGATTTAGGCGAGATGGTAGGAACTCAAAGTAGAGGTCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGAGGCTGTCAGCTGTCTACGCAGACAATGAAGAAGAAAGCAATCTGTAA MSWNSNIEVHCMNNSYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETIYPSTNSNYYKFGHSDSWSTAYFDAQSFEVQGHESTIDEHRRPLSTVPNEQSLGNRVWEENANPNMSSNSMECPRRHSNYHEYQTIWQDIVDPDNMTYEELVDLGEMVGTQSRGLSQELIALLPVSKYKCGFFSRKKSRNERRLSAVYADNEEESNL Homology
BLAST of HG10001154 vs. NCBI nr
Match: XP_038901510.1 (E3 ubiquitin-protein ligase BIG BROTHER-like [Benincasa hispida]) HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98 Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of HG10001154 vs. NCBI nr
Match: XP_008449725.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Cucumis melo]) HSP 1 Score: 350.9 bits (899), Expect = 7.4e-93 Identity = 170/190 (89.47%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of HG10001154 vs. NCBI nr
Match: XP_004142225.1 (E3 ubiquitin-protein ligase BIG BROTHER isoform X1 [Cucumis sativus] >XP_011653590.1 E3 ubiquitin-protein ligase BIG BROTHER isoform X1 [Cucumis sativus] >XP_031739641.1 E3 ubiquitin-protein ligase BIG BROTHER isoform X1 [Cucumis sativus] >XP_031739642.1 E3 ubiquitin-protein ligase BIG BROTHER isoform X1 [Cucumis sativus] >KAE8649510.1 hypothetical protein Csa_017925 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 9.7e-93 Identity = 171/190 (90.00%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of HG10001154 vs. NCBI nr
Match: XP_031739643.1 (E3 ubiquitin-protein ligase BIG BROTHER isoform X2 [Cucumis sativus]) HSP 1 Score: 344.0 bits (881), Expect = 9.1e-91 Identity = 170/190 (89.47%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of HG10001154 vs. NCBI nr
Match: XP_008449726.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 9.4e-88 Identity = 165/190 (86.84%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-22 Identity = 67/186 (36.02%), Postives = 102/186 (54.84%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-07 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy TrEMBL
Match: A0A1S3BNC2 (E3 ubiquitin ligase BIG BROTHER-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491520 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.6e-93 Identity = 170/190 (89.47%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy TrEMBL
Match: A0A0A0L1Z5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290860 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93 Identity = 171/190 (90.00%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy TrEMBL
Match: A0A1S3BNM5 (E3 ubiquitin ligase BIG BROTHER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491520 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88 Identity = 165/190 (86.84%), Postives = 172/190 (90.53%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy TrEMBL
Match: A0A6J1D445 (E3 ubiquitin ligase BIG BROTHER-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017416 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.9e-88 Identity = 164/195 (84.10%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of HG10001154 vs. ExPASy TrEMBL
Match: A0A6J1D6M7 (E3 ubiquitin ligase BIG BROTHER-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017416 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.9e-88 Identity = 164/195 (84.10%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of HG10001154 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23 Identity = 67/186 (36.02%), Postives = 102/186 (54.84%), Query Frame = 0
BLAST of HG10001154 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23 Identity = 67/186 (36.02%), Postives = 102/186 (54.84%), Query Frame = 0
BLAST of HG10001154 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of HG10001154 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06 Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
BLAST of HG10001154 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 3.1e-04 Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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