HG10001136 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001136
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Lipoxygenase
Location	Chr09: 14312711 .. 14313834 (-)
RNA-Seq Expression	HG10001136
Synteny	HG10001136

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTAGTTCCCTAATCTATGAGAAACAGTGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGTAACTTTATCCTTAATGTCGAAGTTGATAGAAATTCTTATCTCAATTTTATGGAACTACCAATAAAACGACAATGTGATATTTCTAAGTAAATTATAAATTAAAAAACCATTTAAAGAAAACTTAAACTACCAATGTTTCTACTCTCTACTAATATTTAAGGGATTGTATTCAAATAGGTTGATACCCTCATCATACAAATATAAATTTCAAAAAGAAAAGAAGACCTCGTATGTTAAAGTTTTTTTGGTTTATTTAGTATAATTAAGGGTAGGAGGATTCAAACGATTGACCTCATGGTCAATCATATTTTAAACGACGTTTGTAGTAAGAATGACATGATAAATAATATTATATTAAGCATGCAGTTCAACAAGTTGTCTTGAGGCCATGATAAATTTATTGTCATTGGATCTTACAGCTTGTCCAAGATCAATTTGTGATTGTTAGATCTTTCGCGTAGGTTCAAGGTCAAATTAGAAACCACTAGATTTGTTTTATGGCCAAGTTTATGTGGACTATAAATAGGTGCATATAAAGTTGAACCCATGCTGACTTGCTATTGATTTGTTAGGCAATTATTAGGAGGCTGATGGGCTACACAAAGATCAACTATGGTTTCCTATTTATTTGTATTGTTTTTGAAAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGGTTTAATCCTTTGGGATGCTATATCAAAGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTGTTGTTAACTTTGGGCAATACTCTTTTACGGCCAATTATTATCCAATTCGACCTAGTCTTACCAGACTCAACATTCCCACTGAATAA

mRNA sequence

ATGGAAATTAGTTCCCTAATCTATGAGAAACAGTGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTGTTGTTAACTTTGGGCAATACTCTTTTACGGCCAATTATTATCCAATTCGACCTAGTCTTACCAGACTCAACATTCCCACTGAATAA

Coding sequence (CDS)

ATGGAAATTAGTTCCCTAATCTATGAGAAACAGTGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTGTTGTTAACTTTGGGCAATACTCTTTTACGGCCAATTATTATCCAATTCGACCTAGTCTTACCAGACTCAACATTCCCACTGAATAA

Protein sequence

MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFANDEWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTIMWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE

Homology

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BLAST of HG10001136 vs. NCBI nr
Match: XP_016900733.1 (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED +A HGLKLSIEDYPFAND         
Sbjct: 401 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPHAAHGLKLSIEDYPFANDGLILWDAIK 460

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EWATEYVNHYYPNPSVVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 461 EWATEYVNHYYPNPSVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 520

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 521 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 557

[Close]

BLAST of HG10001136 vs. NCBI nr
Match: KAA0041377.1 (linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED +A HGLKLSIEDYPFAND         
Sbjct: 600 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPHAAHGLKLSIEDYPFANDGLILWDAIK 659

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EWATEYVNHYYPNPSVVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 660 EWATEYVNHYYPNPSVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 719

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 720 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 756

[Close]

BLAST of HG10001136 vs. NCBI nr
Match: XP_004142235.2 (linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X1 [Cucumis sativus] >KAE8649499.1 hypothetical protein Csa_018002 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 131/157 (83.44%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED NA HGLKLSIEDYPFAND         
Sbjct: 602 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPNAAHGLKLSIEDYPFANDGLILWDAIK 661

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EW TEYV+HYYPNP+VVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 662 EWVTEYVDHYYPNPNVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 721

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 722 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 758

[Close]

BLAST of HG10001136 vs. NCBI nr
Match: XP_031739579.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 131/157 (83.44%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED NA HGLKLSIEDYPFAND         
Sbjct: 600 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPNAAHGLKLSIEDYPFANDGLILWDAIK 659

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EW TEYV+HYYPNP+VVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 660 EWVTEYVDHYYPNPNVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 719

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 720 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 756

[Close]

BLAST of HG10001136 vs. NCBI nr
Match: XP_038900841.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 130/157 (82.80%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISS+ Y+KQWQFNLEALPADLIHRGLAVED NA HGLKLSIEDYPFAND         
Sbjct: 586 MEISSMAYDKQWQFNLEALPADLIHRGLAVEDPNAAHGLKLSIEDYPFANDGLILWDAIK 645

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +WATEYVNHYYPN SVVNSD+EL+AWWTEIR VGHADKKDEPWWP+L+TPK LIDIVTTI
Sbjct: 646 DWATEYVNHYYPNASVVNSDDELQAWWTEIRTVGHADKKDEPWWPILDTPKDLIDIVTTI 705

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           MWVTSGHHA VNFGQY F A+YYP RPSLTRLNIPTE
Sbjct: 706 MWVTSGHHAAVNFGQYPFAASYYPCRPSLTRLNIPTE 742

[Close]

BLAST of HG10001136 vs. ExPASy Swiss-Prot
Match: O24370 (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-55
Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           +E+SS+ Y  +W+F+ EALP +LI RGLAVED N  HGLKL+IEDYPFAND         
Sbjct: 622 IELSSIAYGAEWRFDQEALPQNLISRGLAVEDPNEPHGLKLAIEDYPFANDGLVLWDILK 681

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +W T YVNHYYP  +++ SD+EL+AWW+EI+NVGH DK+DEPWWP L TP  LI I+TTI
Sbjct: 682 QWVTNYVNHYYPQTNLIESDKELQAWWSEIKNVGHGDKRDEPWWPELKTPNDLIGIITTI 741

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYS+ A Y+P RP++ R  +PTE
Sbjct: 742 VWVTSGHHAAVNFGQYSY-AGYFPNRPTVARSKMPTE 777

[Close]

BLAST of HG10001136 vs. ExPASy Swiss-Prot
Match: R9WS04 (Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.6e-55
Identity = 97/157 (61.78%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           M++SS  Y ++W+F+ EALPADLI RG+AVED +A HG+KL+IEDYPFAND         
Sbjct: 622 MQLSSDAYAQKWRFDHEALPADLISRGMAVEDESAPHGIKLTIEDYPFANDGLLLWDAIK 681

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +WAT Y+NHYYP   +V SDEEL+AWWTEIR VGHADKKDEPWWP L T + LI +V+TI
Sbjct: 682 QWATAYINHYYPQAKLVESDEELQAWWTEIRTVGHADKKDEPWWPQLKTQQDLIGVVSTI 741

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           MWV+SGHH+ VNFGQY F   Y+P RP++ R  +P E
Sbjct: 742 MWVSSGHHSAVNFGQYDF-GGYFPNRPTIARTKMPNE 777

[Close]

BLAST of HG10001136 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-54
Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           +E+SS +Y K W+F+ E LPADLI RGLA ED  A+HG++L+I DYPFAND         
Sbjct: 619 LELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIK 678

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EW T+YV HYYP+  ++ SDEEL+ WW+E+RN+GH DKKDEPWWPVL T   LI +VTTI
Sbjct: 679 EWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTI 738

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
            WVTSGHHA VNFGQY +   Y+P RP+ TR+ +PTE
Sbjct: 739 AWVTSGHHAAVNFGQYGY-GGYFPNRPTTTRIRMPTE 774

[Close]

BLAST of HG10001136 vs. ExPASy Swiss-Prot
Match: P93184 (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-47
Identity = 87/157 (55.41%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           +E+SS+ Y++QW+F++EALP DLI RG+AV + N +  L+L+IEDYP+AND         
Sbjct: 652 LELSSVAYDQQWRFDMEALPEDLIRRGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIK 711

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +WA  YV HYYP  + +  DEEL+AWWTE+R  GHADK+DEPWWP L++ ++L   + TI
Sbjct: 712 QWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATI 771

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           MWVTSGHHA VNFGQY   A Y P RP++ R N+PTE
Sbjct: 772 MWVTSGHHAAVNFGQYPM-AGYIPNRPTMARRNMPTE 805

[Close]

BLAST of HG10001136 vs. ExPASy Swiss-Prot
Match: P38419 (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 6.0e-47
Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           ME+SS+ Y+K W+F+ EALPADL+ RG+A ED  A+HGLKL+IEDYPFAND         
Sbjct: 646 MELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIK 705

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
            W   YV  +YP+   V  DEEL+A+WTE+R  GH DKKD PWWP L++P+ L   +TTI
Sbjct: 706 TWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTI 765

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WV + HHA VNFGQY F   Y+P RPS+ R  +P E
Sbjct: 766 VWVAAAHHAAVNFGQYDF-GGYFPNRPSIARTVMPVE 801

[Close]

BLAST of HG10001136 vs. ExPASy TrEMBL
Match: A0A5A7TIA3 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00220 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED +A HGLKLSIEDYPFAND         
Sbjct: 600 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPHAAHGLKLSIEDYPFANDGLILWDAIK 659

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EWATEYVNHYYPNPSVVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 660 EWATEYVNHYYPNPSVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 719

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 720 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 756

[Close]

BLAST of HG10001136 vs. ExPASy TrEMBL
Match: A0A1S4DXN0 (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491674 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISSL+Y+KQWQFNLEALPADLIHRGLAVED +A HGLKLSIEDYPFAND         
Sbjct: 401 MEISSLVYDKQWQFNLEALPADLIHRGLAVEDPHAAHGLKLSIEDYPFANDGLILWDAIK 460

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EWATEYVNHYYPNPSVVNSD+EL+AWWTEIR VGHADKKDEPWWP+LNTPK LIDIVTTI
Sbjct: 461 EWATEYVNHYYPNPSVVNSDDELQAWWTEIRTVGHADKKDEPWWPILNTPKDLIDIVTTI 520

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQYSF A+YYP RPSLTRLNIPTE
Sbjct: 521 IWVTSGHHAAVNFGQYSFAASYYPARPSLTRLNIPTE 557

[Close]

BLAST of HG10001136 vs. ExPASy TrEMBL
Match: A0A6J1K0X9 (Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111491398 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 127/157 (80.89%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISS++YEKQWQFNLEALPADLIHRGLAVED NA HGLKLSIEDYPFAND         
Sbjct: 602 MEISSVVYEKQWQFNLEALPADLIHRGLAVEDPNAPHGLKLSIEDYPFANDGLILWDAIK 661

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +W TEYVNHYYP+PS+VNSD EL+AWWTEIR VGH DKKDEPWWP+LNTP  LI IVTTI
Sbjct: 662 QWVTEYVNHYYPDPSLVNSDGELQAWWTEIREVGHGDKKDEPWWPILNTPNDLIHIVTTI 721

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQY FT +YYPIRPSLTRLNIPTE
Sbjct: 722 IWVTSGHHAAVNFGQYPFT-SYYPIRPSLTRLNIPTE 757

[Close]

BLAST of HG10001136 vs. ExPASy TrEMBL
Match: A0A6J1H3S4 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111459733 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 127/157 (80.89%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           MEISS++YEKQWQFNLEALPADLIHRGLAVED NA HGLKLSIEDYPFAND         
Sbjct: 602 MEISSVVYEKQWQFNLEALPADLIHRGLAVEDPNAPHGLKLSIEDYPFANDGLILWDAIK 661

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +W TEYVNHYYP+PS+VNSD EL+AWWTEIR VGH DKKDEPWWP+LNTP  LI IVTTI
Sbjct: 662 QWVTEYVNHYYPDPSLVNSDGELQAWWTEIREVGHGDKKDEPWWPILNTPNDLIHIVTTI 721

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +WVTSGHHA VNFGQY FT +YYPIRPSLTRLNIPTE
Sbjct: 722 IWVTSGHHAAVNFGQYPFT-SYYPIRPSLTRLNIPTE 757

[Close]

BLAST of HG10001136 vs. ExPASy TrEMBL
Match: A0A6J1D4V6 (Lipoxygenase OS=Momordica charantia OX=3673 GN=LOC111017309 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.9e-66
Identity = 115/157 (73.25%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           ME+SS++Y+KQWQFNLEALPADLIHRG+AVED NA HG+KLSIEDYPFAND         
Sbjct: 558 MEVSSMVYQKQWQFNLEALPADLIHRGMAVEDPNAAHGVKLSIEDYPFANDGLILWDAIK 617

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EWATEYVNHYYP+P VV SD+EL+AWWTEIR+VGH DKK+EPWWP+LNTP+ LID+V+++
Sbjct: 618 EWATEYVNHYYPDPGVVKSDKELQAWWTEIRSVGHGDKKEEPWWPILNTPEDLIDVVSSM 677

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           MWVTSGHHA VNFGQY F A+Y+P RPS+ R+N+PTE
Sbjct: 678 MWVTSGHHAAVNFGQYYF-ASYFPARPSVARINVPTE 713

[Close]

BLAST of HG10001136 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 214.2 bits (544), Expect = 7.3e-56
Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           +E+SS +Y K W+F+ E LPADLI RGLA ED  A+HG++L+I DYPFAND         
Sbjct: 619 LELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIK 678

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           EW T+YV HYYP+  ++ SDEEL+ WW+E+RN+GH DKKDEPWWPVL T   LI +VTTI
Sbjct: 679 EWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTI 738

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
            WVTSGHHA VNFGQY +   Y+P RP+ TR+ +PTE
Sbjct: 739 AWVTSGHHAAVNFGQYGY-GGYFPNRPTTTRIRMPTE 774

[Close]

BLAST of HG10001136 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-43
Identity = 79/157 (50.32%), Postives = 105/157 (66.88%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           ME+SS  Y+  W+F++E LPADL+ RG+A EDS+A+ G++L I+DYP+A D         
Sbjct: 640 MELSSAAYKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIK 699

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
           +    YV H+Y +   + SD EL+AWW EI+N GH DKKDEPWWP LNT + L  I+T +
Sbjct: 700 DLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNM 759

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +W+ SG HA +NFGQY F   Y P RP+L R  IP E
Sbjct: 760 IWIASGQHAAINFGQYPF-GGYVPNRPTLLRKLIPQE 795

[Close]

BLAST of HG10001136 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 )

HSP 1 Score: 171.0 bits (432), Expect = 7.1e-43
Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           ME+S+  Y+  W+F++E LPADLI RG+A+ D+   HGLKL IEDYP+AND         
Sbjct: 643 MEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQ 702

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
            W   YV  YYPNP+++ +D EL++W++E  NVGHAD +D  WWP L+T   L+ I+TT+
Sbjct: 703 TWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTL 762

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +W+ S  HA +NFGQY +   Y P RP L R  IP E
Sbjct: 763 IWLASAQHAALNFGQYPY-GGYVPNRPPLMRRLIPDE 798

[Close]

BLAST of HG10001136 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-42
Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           +EISS  Y+ +W+F++E LPADLI RG+AV D    HGLKL +EDYP+AND         
Sbjct: 650 LEISSAAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQ 709

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
            W   YV  YY N +++ +D EL+AW++E  NVGHAD +D  WWP L+T + L+ ++TTI
Sbjct: 710 TWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTI 769

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIPTE 149
           +W+ S  HA +NFGQY +   Y P RP L R  IP E
Sbjct: 770 IWLASAQHAALNFGQYPY-GGYVPNRPPLMRRLIPDE 805

[Close]

BLAST of HG10001136 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.1e-39
Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 1   MEISSLIYEKQWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFAND--------- 60
           ME+SS IY K W F  +ALP DL+ RG+AVED N+D+G+KL IEDYPFA D         
Sbjct: 607 MEMSSSIY-KNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLIEDYPFAVDGLEIWSAIK 666

Query: 61  EWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTI 120
            W TEY   YY N   V +D E+++WWTE+R  GH DK+ E WWP + T   LI+  T I
Sbjct: 667 TWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTII 726

Query: 121 MWVTSGHHAVVNFGQYSFTANYYPIRPSLTRLNIP 147
           +W+ S  HA VNFGQY + A + P RP+++R  +P
Sbjct: 727 IWIASALHAAVNFGQYPY-AGFLPNRPTVSRRFMP 759

The following BLAST results are available for this feature:

BLAST of HG10001136 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900733.1	9.5e-74	84.71	PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]	[more]
KAA0041377.1	9.5e-74	84.71	linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]	[more]
XP_004142235.2	6.2e-73	83.44	linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X1 [Cucumis sativus] >KAE8...	[more]
XP_031739579.1	6.2e-73	83.44	linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_038900841.1	1.2e-71	82.80	linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]	[more]

BLAST of HG10001136 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24370	1.2e-55	61.78	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]
R9WS04	4.6e-55	61.78	Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=...	[more]
P38418	1.0e-54	59.87	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
P93184	2.1e-47	55.41	Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1	[more]
P38419	6.0e-47	54.78	Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX...	[more]

BLAST of HG10001136 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIA3	4.6e-74	84.71	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00220 P...	[more]
A0A1S4DXN0	4.6e-74	84.71	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491674 PE=3 SV=1	[more]
A0A6J1K0X9	2.6e-69	80.89	Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111491398 PE=3 SV=1	[more]
A0A6J1H3S4	2.6e-69	80.89	Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111459733 PE=3 SV=1	[more]
A0A6J1D4V6	7.9e-66	73.25	Lipoxygenase OS=Momordica charantia OX=3673 GN=LOC111017309 PE=3 SV=1	[more]

BLAST of HG10001136 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45140.1	7.3e-56	59.87	lipoxygenase 2	[more]
AT1G67560.1	3.2e-43	50.32	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	7.1e-43	49.04	lipoxygenase 3	[more]
AT1G72520.1	3.5e-42	49.04	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT3G22400.1	2.1e-39	49.68	PLAT/LH2 domain-containing lipoxygenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.245.10		coord: 1..148 e-value: 9.9E-49 score: 168.3
None	No IPR available	PANTHER	PTHR11771:SF89	LINOLEATE 13S-LIPOXYGENASE 2-1, CHLOROPLASTIC	coord: 1..148
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 1..148 e-value: 1.7E-66 score: 225.1
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..148 score: 53.660416
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 1..148
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	48484	Lipoxigenase	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001136.1	HG10001136.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen