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HG10001088 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGATACAACTACTACTACTACCGGTACCCTTACTTGGAGTACTTGACATTGCCTCCCCTGCAGCTGTGTGTGTTTGGTGCGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCCCTCGGCCTCCCCTTTCTCGTCCCCTTGCCCGAGCAAGACTCCCTCCACCGTGCCGGTGGCTCACCCTGGGGTGTTGCCGTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAATCACATTACCACCAACGCTGGTTTCCTTTCGGGTATAGATAA ATGGCGAGATACAACTACTACTACTACCGGTACCCTTACTTGGAGTACTTGACATTGCCTCCCCTGCAGCTGTGTGTGTTTGGTGCGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCCCTCGGCCTCCCCTTTCTCGTCCCCTTGCCCGAGCAAGACTCCCTCCACCGTGCCGGTGGCTCACCCTGGGGTGTTGCCGTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAATCACATTACCACCAACGCTGGTTTCCTTTCGGGTATAGATAA ATGGCGAGATACAACTACTACTACTACCGGTACCCTTACTTGGAGTACTTGACATTGCCTCCCCTGCAGCTGTGTGTGTTTGGTGCGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCCCTCGGCCTCCCCTTTCTCGTCCCCTTGCCCGAGCAAGACTCCCTCCACCGTGCCGGTGGCTCACCCTGGGGTGTTGCCGTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAATCACATTACCACCAACGCTGGTTTCCTTTCGGGTATAGATAA MARYNYYYYRYPYLEYLTLPPLQLCVFGAILLLVMAFSWYIFYDSFLEDFIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQDSLHRAGGSPWGVAVLLVFLLYVISHQSHYHQRWFPFGYR Homology
BLAST of HG10001088 vs. NCBI nr
Match: KAG6570356.1 (hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010237.1 hypothetical protein SDJN02_27029, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56 Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of HG10001088 vs. NCBI nr
Match: XP_007014761.1 (PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao] >EOY32380.1 Uncharacterized protein TCM_040264 [Theobroma cacao]) HSP 1 Score: 154.1 bits (388), Expect = 8.1e-34 Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of HG10001088 vs. NCBI nr
Match: XP_022756288.1 (uncharacterized protein LOC111304026 [Durio zibethinus]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 76/114 (66.67%), Postives = 95/114 (83.33%), Query Frame = 0
BLAST of HG10001088 vs. NCBI nr
Match: XP_021278994.1 (uncharacterized protein LOC110412707 [Herrania umbratica]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 77/116 (66.38%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of HG10001088 vs. NCBI nr
Match: XP_012462541.1 (PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii] >XP_016734953.1 uncharacterized protein LOC107945445 [Gossypium hirsutum] >XP_017605397.1 PREDICTED: uncharacterized protein LOC108452152 [Gossypium arboreum] >XP_040941762.1 uncharacterized protein LOC121212647 [Gossypium hirsutum] >KAB1996691.1 hypothetical protein ES319_D13G249000v1 [Gossypium barbadense] >TYG38918.1 hypothetical protein ES288_D13G262800v1 [Gossypium darwinii] >TYH36452.1 hypothetical protein ES332_D13G265700v1 [Gossypium tomentosum] >KAB2050259.1 hypothetical protein ES319_A13G234100v1 [Gossypium barbadense] >KAG4113345.1 hypothetical protein ERO13_D13G217700v2 [Gossypium hirsutum]) HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32 Identity = 74/116 (63.79%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of HG10001088 vs. ExPASy TrEMBL
Match: A0A0A0KZ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280660 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53 Identity = 113/125 (90.40%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of HG10001088 vs. ExPASy TrEMBL
Match: A0A061GR99 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_040264 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.9e-34 Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of HG10001088 vs. ExPASy TrEMBL
Match: A0A6J0ZX76 (uncharacterized protein LOC110412707 OS=Herrania umbratica OX=108875 GN=LOC110412707 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 8.8e-34 Identity = 77/116 (66.38%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of HG10001088 vs. ExPASy TrEMBL
Match: A0A6P5ZU06 (uncharacterized protein LOC111304026 OS=Durio zibethinus OX=66656 GN=LOC111304026 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 8.8e-34 Identity = 76/114 (66.67%), Postives = 95/114 (83.33%), Query Frame = 0
BLAST of HG10001088 vs. ExPASy TrEMBL
Match: A0A5J5NVD3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G234100v1 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 74/116 (63.79%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of HG10001088 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 9.3e-28 Identity = 60/116 (51.72%), Postives = 83/116 (71.55%), Query Frame = 0
BLAST of HG10001088 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 8.4e-21 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of HG10001088 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07 Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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