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HG10000994 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAACTTCGTACCAGAGGCAGAAACTGCAGCTGCTGCAGAATCAATTGAAGATTCTTTTCTAAAAGATCTCTCGATGCCATACCCAATTATCTCGGAGCGTTTTAAACGGGAAGCTTTGGACCTTAAAGAAACTGTAAGTATTCCTCTTCTTGTTCTGCATTTCGCTTTCATTTGGGTGTTTTTTTTAAATGCCCACCAGATGTTTGTGTTAATGTTTCAGACAGTAAGAGTAATTGGGCCACGTATGCATGATTTCACACTCTATTCTGGGCCTCTTGGAATGACTTTCTTGCTTTTAAAAGCTCACGAGGTCCCTTCAAATAACAATGATCTTAGACTCTGCGCTCAAATTGTTATGGCTTGTGATTAA ATGCCAAACTTCGTACCAGAGGCAGAAACTGCAGCTGCTGCAGAATCAATTGAAGATTCTTTTCTAAAAGATCTCTCGATGCCATACCCAATTATCTCGGAGCGTTTTAAACGGGAAGCTTTGGACCTTAAAGAAACTACAGTAAGAGTAATTGGGCCACGTATGCATGATTTCACACTCTATTCTGGGCCTCTTGGAATGACTTTCTTGCTTTTAAAAGCTCACGAGGTCCCTTCAAATAACAATGATCTTAGACTCTGCGCTCAAATTGTTATGGCTTGTGATTAA ATGCCAAACTTCGTACCAGAGGCAGAAACTGCAGCTGCTGCAGAATCAATTGAAGATTCTTTTCTAAAAGATCTCTCGATGCCATACCCAATTATCTCGGAGCGTTTTAAACGGGAAGCTTTGGACCTTAAAGAAACTACAGTAAGAGTAATTGGGCCACGTATGCATGATTTCACACTCTATTCTGGGCCTCTTGGAATGACTTTCTTGCTTTTAAAAGCTCACGAGGTCCCTTCAAATAACAATGATCTTAGACTCTGCGCTCAAATTGTTATGGCTTGTGATTAA MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTVRVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD Homology
BLAST of HG10000994 vs. NCBI nr
Match: XP_022140440.1 (lanC-like protein GCL2 [Momordica charantia]) HSP 1 Score: 130.2 bits (326), Expect = 9.6e-27 Identity = 72/99 (72.73%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of HG10000994 vs. NCBI nr
Match: KAG7010366.1 (LanC-like protein GCL2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. NCBI nr
Match: XP_022943721.1 (lanC-like protein GCL2 isoform X1 [Cucurbita moschata] >XP_022943722.1 lanC-like protein GCL2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. NCBI nr
Match: KAG6570504.1 (LanC-like protein GCL2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. NCBI nr
Match: XP_022943723.1 (lanC-like protein GCL2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy Swiss-Prot
Match: Q8VZQ6 (LanC-like protein GCL2 OS=Arabidopsis thaliana OX=3702 GN=GCL2 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy Swiss-Prot
Match: F4IEM5 (LanC-like protein GCR2 OS=Arabidopsis thaliana OX=3702 GN=GCR2 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.8e-13 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy TrEMBL
Match: A0A6J1CF36 (lanC-like protein GCL2 OS=Momordica charantia OX=3673 GN=LOC111011116 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27 Identity = 72/99 (72.73%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy TrEMBL
Match: A0A6J1FSH6 (lanC-like protein GCL2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448386 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 9.0e-23 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy TrEMBL
Match: A0A6J1FXB1 (lanC-like protein GCL2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448386 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 9.0e-23 Identity = 67/99 (67.68%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy TrEMBL
Match: A0A6J1JCS6 (lanC-like protein GCL2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483856 PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.9e-22 Identity = 66/99 (66.67%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of HG10000994 vs. ExPASy TrEMBL
Match: A0A6J1J9S1 (lanC-like protein GCL2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483856 PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.9e-22 Identity = 66/99 (66.67%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of HG10000994 vs. TAIR 10
Match: AT2G20770.1 (GCR2-like 2 ) HSP 1 Score: 89.4 bits (220), Expect = 1.7e-18 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of HG10000994 vs. TAIR 10
Match: AT1G52920.1 (G protein coupled receptor ) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of HG10000994 vs. TAIR 10
Match: AT5G65280.1 (GCR2-like 1 ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 31/89 (34.83%), Postives = 42/89 (47.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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