HG10000952 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000952
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr09: 12269952 .. 12272529 (-)
RNA-Seq ExpressionHG10000952
SyntenyHG10000952
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGAAATCAGATGAAAAATGTGTGAAACTGGGGGTAATGGGAAGGGAATCCAAAGTAGGGTTCATAAAGGACTTGGATTACAAACTGGGCCCAAAACCGATTATCCAAACGTGGGATTTGGACTCCAAACCATTACAAGCCCATTGCATACCCCTTCCCCAAACAACCCCTAAATGTTTTGGGTTTAGTAATTAAAACAATGGGATTATGTAGGGAGAAATTTTGGGTCTACATTGATCCCCTGCTTTGAAGACTTCTTAGTTGAAGATAATGTTGTTGATAATTATTCCTTATAAAGTATTGTTTTCCTCTAAGAAAATATTTAGTTCGTTGATGGTTCAACCATAATGTATTGGATTATCATTCATTTATACATAAATTTCTTGTTGAGTATGTTGGAATGTGCTTGGTAAGCAATAGTTATTTAGTGCATTGTGCTTATTGAAAAAACTCGAATGGATCTAGCATGTTATTCTTAATATTGAGACATGAATCAATTGCATGTATGTTGTGAATCTTTCCTACAGTGTTATTCTACTTTTGCTCGGGACTAGCAAAATTCTAAGTTTGGGATGGTAAAACGCACCTAAAATGTGCGTTATTTTCCTCTAATTTAGGGATGTTTTTATTATATTTAATATTTTTTGTAGTGGTTTTGAGGTATTAATGAAGAAAAGAATTTTAGAAGTCAAAAGAACCAAACCCAACTTAAATCGGACGAAAACAAGTTAAAAACCCAAAGAAAAAGGGAGCATAGAGCAAGAGCATAGCTATGCTCACTAGGAAGGTTCAAGGATCGTAGCTCTGCTCCGTTTTTGAAAAATTGTACTTTTTTTTTAAAAAAAAAGTTATTGGTGAGCAAGTTTTTTATTTTCTATAAATTGGATGGTCTAAAACCGACTTTAGGATCAGATTTTGGAGTATTTGAGACCTAAAGAGAGTTTAGAACAAAGTATGAAGATTCCATGATGCCGAAAGGTTCGAGGATTATTGGAATGCCAAATCTATCTTGGAGACGAGCATGGAAGTCGGATAACTTCTCTTCCCTTTCTTTATTCTTGGGTTATTTGTTGTATTTTGTTGTTCTAAAGTGGATTTTGTCTATAGAAGTCATGTTAGTCTAAATTTCTCATAGTTTTAGGAGTAGATGAATTCTTATGTTTAAATTGTTGAACACTTTGCTTATTGAATATTAATTTACATTTACACTTTCTAGCATGACCATTTTAATGCTTTTGAATATTTGATCAATGTTTAAATGATTTCATGATTTAGAATCTTGCTTGAACAAGTGAGTTGTAGATTAGATCATGCATACTAGACTATCGTTTGAAATAACAGAAAGTAGTTGGATAATGATAGAGATTGCTAATGAAGGTTCTCAATGCTTTGCTTAATCATCTAGTTTCAAGCGATTAATAATTAGGCTTTAAGCAAAAGAAAAAGTTGTTTTCGAAAGATTCAATCCGGATAAATGACTTCTAGATTTAGGTGTTGTGTTAATTACTTCAAGAGTCAAACATTTGTGTTTAATAATACATTTGATGAAATCTATTCCCTAAAAGTCTCTTAGTTGATAATTTTTATATCTTTATCATTTTTATTTGCTTTCTTAGATTCGTTTATCCTAAGAGTCATTACAATTTGATTCCCTAAATAAAATTGGAACGATCTCTGAATAGCTAAAATATTAATCAATCTGATTCTCTGAAGACGATACTCGTTCAAGGCCATTTTAACTATATTATTACTTGACGCATGCGCTTGCGCATATCAAGTTTAAGGTGTACATTAGTTTATTTTTGCTTTTATTTTTCTTATTCTTGTTTTTTGAGTCTTGCTTTTGTTGATAAATTGTGGTGTTGGCATGCTATGGATTCTAATATTTATATGTGGCATCATAGGGAGTTTCAAACCAACCAAGGTCCAATACCACCACCACCACCCTTTAACTCTAGCCTTTACCCTTCTAATTACCTTAGCCATGTGTATGTGAGCTATCCCTCCTTTGAGTATGTGAGCTATGAATCAACCCCAATAGAGAAGAAGCCTTTCCTAGAAGATGTGTTAAAAGAGTATATCCTAAAGGGTAAGGCGAAGATGTTCATTATAGAAGAGAGAAAGAGGTTGGCTAGGGTAGAAGTTCAAGTGGTAGAGAACTAGGTCGTTCTAACCTGCATATGCAATCAACTTAGTCTGATAGTTGATGCGCTTAAAGCTTTCAGTGAGGATAAATTTCTCTGGTGCCACCAAGATAGGAGAACCTAGGGTTGTATACTATGATGATCAGGATGAGTCAGAGGGAGTTGAGTCACTTGAAGATGAGATTTATGAGCTTGAAAGAGAAATTGTACGATATTTTTATAAAGATGCCCAAGAGATTAAGGTTGAGGTAGAAAAACGTAGTGTGCCATCTCTAGAGAGTCTTCCTAGTAGTGACTCTTCTATCCCATATGAGCTTTGTAATGTAGAATCAACCAAGGAGTCGGTTTGTGAAAACATGGAAGAAATTGTACTTAATGGTGATGTAATGACCTACACAATCATTAAGGGCATTTTCTTAATTTTATAA

mRNA sequence

ATGGGTTGGAAATCAGATGAAAAATGTGTGAAACTGGGGGTAATGGGAAGGGAATCCAAAGTAGGGTTCATAAAGGACTTGGATTACAAACTGGGCCCAAAACCGATTATCCAAACGTGGGATTTGGACTCCAAACCATTACAAGCCCATTGCATACCCCTTCCCCAAACAACCCCTAAATGTTTTGGGTTTATGAGGATAAATTTCTCTGGTGCCACCAAGATAGGAGAACCTAGGGTTGTATACTATGATGATCAGGATGAGTCAGAGGGAGTTGAGTCACTTGAAGATGAGATTTATGAGCTTGAAAGAGAAATTGTACGATATTTTTATAAAGATGCCCAAGAGATTAAGGTTGAGGTAGAAAAACGTAGTGTGCCATCTCTAGAGAGTCTTCCTAGTAGTGACTCTTCTATCCCATATGAGCTTTGTAATGTAGAATCAACCAAGGAGTCGGTTTGTGAAAACATGGAAGAAATTGTACTTAATGGTGATGTAATGACCTACACAATCATTAAGGGCATTTTCTTAATTTTATAA

Coding sequence (CDS)

ATGGGTTGGAAATCAGATGAAAAATGTGTGAAACTGGGGGTAATGGGAAGGGAATCCAAAGTAGGGTTCATAAAGGACTTGGATTACAAACTGGGCCCAAAACCGATTATCCAAACGTGGGATTTGGACTCCAAACCATTACAAGCCCATTGCATACCCCTTCCCCAAACAACCCCTAAATGTTTTGGGTTTATGAGGATAAATTTCTCTGGTGCCACCAAGATAGGAGAACCTAGGGTTGTATACTATGATGATCAGGATGAGTCAGAGGGAGTTGAGTCACTTGAAGATGAGATTTATGAGCTTGAAAGAGAAATTGTACGATATTTTTATAAAGATGCCCAAGAGATTAAGGTTGAGGTAGAAAAACGTAGTGTGCCATCTCTAGAGAGTCTTCCTAGTAGTGACTCTTCTATCCCATATGAGCTTTGTAATGTAGAATCAACCAAGGAGTCGGTTTGTGAAAACATGGAAGAAATTGTACTTAATGGTGATGTAATGACCTACACAATCATTAAGGGCATTTTCTTAATTTTATAA

Protein sequence

MGWKSDEKCVKLGVMGRESKVGFIKDLDYKLGPKPIIQTWDLDSKPLQAHCIPLPQTTPKCFGFMRINFSGATKIGEPRVVYYDDQDESEGVESLEDEIYELEREIVRYFYKDAQEIKVEVEKRSVPSLESLPSSDSSIPYELCNVESTKESVCENMEEIVLNGDVMTYTIIKGIFLIL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000952.1HG10000952.1mRNA