HG10000928 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000928
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr09: 11729018 .. 11731530 (-)
RNA-Seq ExpressionHG10000928
SyntenyHG10000928
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCAGTGTCTTCAAGATATACACTCCTGCACGCACAACGAACGATTGGACTGACACACGATGAACGACTGGTTGCACGAATGATGAACGACAGAATCCATGATCGACGATTAGGAGAGGAAGGAGACTCGTGAGTAACTAGGGGTTGCCAAAATTCGAGAGATGGGTGTAGTTGGATATCTCGATTTGGAGCTTTCTTTTTCTCTTTTTGTTTTAATTTGTTCAAATTAAATAGTATTTTAATTTAATAGTCTTTCTTGATATTTAAAATGCTCAAATAATATGTCAATAAATAAATCTTATTCTTGATATTTTATTAGTGTCAAGTATTGGTTCGGGCAAAAAATCCGTAAAATCTCCGCTTTTTTATGCTAAGCTCATTACTTGATTTTTTTTTATAAAAATGTCAAGAAAGTAAAAGTTTCGAGTGTCATGTAACATAGATTTTATAGTAGTGATCATAAGGGAAAGCCCAGGAAAAGAATCCATAACTTCTCTATATATCATTATCACTGTGAGCACATACTAAAAATGTGAAGTGGGATAACCAACGACTTCTCTCTCTTTAATTAAATTAAACTATTTAATTTAATTTAATATTAACTAAATTAATCAATCAATTAATTAATTAATTAATTAAAGTAAATATCTAATATTTAATTAAATATTGGAATCTTATTCAAATACTTATATCTCTCATAATCCATAGTTTTAATATGAATCTTATTCATATTACATTTTAACATGTAGTTTTAATATGAATATTATATATTAAATTAATATTTGGATCATATTCAAATATATATTAAATCTCCTTTTATTACATGGTTTAATTTTGAATCTCATTAAAAATAAACTTTATATTATAATGTATCTATATATATACATTATACTAATTGTATCATATAAAAAAAATGTTATTTCCTTAATTAATTTGAACTATTCAAATTCTTTCAAAACTAATAGTCCTTGTTAATCTGTTGTGAGTTAGCCGAGGACTTAATGGACCTACAAATTTAAGCTCCAATGATACAAGGTTAATTAATTAAATTAACCAACATTCATTAATTATGGATCACACCACTAAAGACCCATAGCTGCACTCTTAGCACGGTAGAACATGTTGCGTCCATGGATTTAACCATTACAAGTAAGTCGATTTTTTACGAGTTGTTTGTAATTACAACTGGGTCAAATTACCATTTTTTATCCTAGTAATTTCCTTTTACTTCTAAAGTACCACTGATCCCTCTAATGAATAATCTGTTTATGGTCCTATTATAAACCAAATCCCTATCGGGCCTGTGAAAGGGCGGGTACCTTTATTCAAGATCCAGAATCAACACTTAAGGGAACTACTCATCTACTGTAACGCCCCCAACTCTTGACACCTTCCAATAGGACATTACCACACCCAAGGACTTAGGACACACAGACTTCCCTCAACAGAGAGCAATATAGAATAAAGACCCAATCTCTTGGAAAAGAAAGATGACAATTAAGAATTTAGATAAATAAATAAATAAATAGTTAATTCCAAAATCATTTTCAAAAAGTAAAATTAAATCCTGGATCGGGTTACCTCTATCCAAACACAGGAATAATTAAATTAAAATAATAAACGAATGAAATCAGAGAAAAAGAAACGACTCAAAGACCAAACTACCACCACCCATCTACGACAAAAGACATGAATAAATAAAATGCGAAAGCTTCTAACTAATCCCTGTTTGGCCTGATCACGGATTCTTCCTATCGCCTGCCGGTCCATTTCTGCCTTTACCTGAAATTAATAAAGAGAAAGGAATGAGTATAAAACTCAGTAAGTAACCCCATTGTCGGGATTTCTACTGTACATGAGCAACCTACGCTCTCCCATCACCATGTCTAGCGGCCTGAAGGCACACCGTCAAAACTGAAGGGGTGAGCCTGATGACTCACAGTAACAAACATGGAGGTGAACTCGTCGGTTCACGCATGTCTAGTAGCCTGATGGCACACCGTCAAACATGGAAGTGAACTTGTCAATTCACAGCATCGCAACATGAGATGAAACAGGCATCTAGCAAGCATGTAATTCAGACATACATACACCCATACATAATTATCAAAATCTCAGTGGCAGTCATACTCACAAAACAACCTAACCATGCAGGTTAAATTACTTCCAGGGGTAATATTCGAGCACCAGATCTGAACCCAAACTATCCTAACCTAAAAAAGGAAACTCACTGGAAACCAGCGGCTGAGAGCATTGTCGGCGGCGACGGGCGGCTTCACTAGACGCCGTGACGGTAAAAAACCAAACGACAACCACTGCTGGCGAACGTCTGTGAGGAAACCAGAGGCGCACGGCGCTGGCGGCACGCGCAGTAGGGCGGCGCGACCGGTTCGACAACGGACTACGGTCGGAACGTCACAATCTACGGCTAAGAACATGAGCGATGGTGAGGGCAGACGGCGAAACGCGAGCGGCGACGAGACGCAAGCGAACGCGACCGGACGGTGA

mRNA sequence

ATGAGAGCAGTGTCTTCAAGATATACACTCCTGCACGCACAACGAACGATTGGACTGACACACGATGAACGACTGGTTGCACGAATGATGAACGACAGAATCCATGATCGACGATTAGGAGAGGAAGGAGACTCGAAACTCACTGGAAACCAGCGGCTGAGAGCATTGTCGGCGGCGACGGGCGGCTTCACTAGACGCCGTGACGGTAAAAAACCAAACGACAACCACTGCTGGCGAACGTCTGTGAGGAAACCAGAGGCGCACGGCGCTGGCGGCACGCGCAGTAGGGCGGCGCGACCGGTTCGACAACGGACTACGGTCGGAACGTCACAATCTACGGCTAAGAACATGAGCGATGGTGAGGGCAGACGGCGAAACGCGAGCGGCGACGAGACGCAAGCGAACGCGACCGGACGGTGA

Coding sequence (CDS)

ATGAGAGCAGTGTCTTCAAGATATACACTCCTGCACGCACAACGAACGATTGGACTGACACACGATGAACGACTGGTTGCACGAATGATGAACGACAGAATCCATGATCGACGATTAGGAGAGGAAGGAGACTCGAAACTCACTGGAAACCAGCGGCTGAGAGCATTGTCGGCGGCGACGGGCGGCTTCACTAGACGCCGTGACGGTAAAAAACCAAACGACAACCACTGCTGGCGAACGTCTGTGAGGAAACCAGAGGCGCACGGCGCTGGCGGCACGCGCAGTAGGGCGGCGCGACCGGTTCGACAACGGACTACGGTCGGAACGTCACAATCTACGGCTAAGAACATGAGCGATGGTGAGGGCAGACGGCGAAACGCGAGCGGCGACGAGACGCAAGCGAACGCGACCGGACGGTGA

Protein sequence

MRAVSSRYTLLHAQRTIGLTHDERLVARMMNDRIHDRRLGEEGDSKLTGNQRLRALSAATGGFTRRRDGKKPNDNHCWRTSVRKPEAHGAGGTRSRAARPVRQRTTVGTSQSTAKNMSDGEGRRRNASGDETQANATGR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000928.1HG10000928.1mRNA