HG10000877 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATACACAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCATTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGGATAAATGTAAAATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTCAAATTTTTGTTGAAAATATCAAGCTTGACATCACCTACATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATCAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATTAAGATGTAG ATGAAATACACAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCATTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGGATAAATGTAAAATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTCAAATTTTTGTTGAAAATATCAAGCTTGACATCACCTACATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATCAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATTAAGATGTAG ATGAAATACACAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCATTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGGATAAATGTAAAATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTCAAATTTTTGTTGAAAATATCAAGCTTGACATCACCTACATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATCAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATTAAGATGTAG MKYTGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLKDKCKMELDGKMSKFSDSNKEKLFELWSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFQIFVENIKLDITYIPPDVLQHIRKEWEDVRSARNDYQFKNAKLLVEISDIKM Homology
BLAST of HG10000877 vs. NCBI nr
Match: XP_038877618.1 (STOREKEEPER protein-like [Benincasa hispida]) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46 Identity = 108/165 (65.45%), Postives = 127/165 (76.97%), Query Frame = 0
BLAST of HG10000877 vs. NCBI nr
Match: XP_022158998.1 (probable transcription factor At4g01260 [Momordica charantia]) HSP 1 Score: 162.9 bits (411), Expect = 2.2e-36 Identity = 84/155 (54.19%), Postives = 115/155 (74.19%), Query Frame = 0
BLAST of HG10000877 vs. NCBI nr
Match: KAG6607617.1 (hypothetical protein SDJN03_00959, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.3 bits (194), Expect = 3.2e-11 Identity = 33/65 (50.77%), Postives = 54/65 (83.08%), Query Frame = 0
BLAST of HG10000877 vs. NCBI nr
Match: XP_023521141.1 (probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 79.3 bits (194), Expect = 3.2e-11 Identity = 45/132 (34.09%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of HG10000877 vs. NCBI nr
Match: KAG6585873.1 (putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-10 Identity = 46/132 (34.85%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy Swiss-Prot
Match: Q94IK2 (STOREKEEPER protein OS=Solanum tuberosum OX=4113 GN=STK PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.1e-05 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy Swiss-Prot
Match: O23063 (Probable transcription factor At4g00390 OS=Arabidopsis thaliana OX=3702 GN=At4g00390 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04 Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy TrEMBL
Match: A0A6J1DXL5 (probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111025442 PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36 Identity = 84/155 (54.19%), Postives = 115/155 (74.19%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy TrEMBL
Match: A0A0A0L833 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G498910 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28 Identity = 81/140 (57.86%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy TrEMBL
Match: A0A6J1GK86 (probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC111454655 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 7.7e-11 Identity = 46/132 (34.85%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy TrEMBL
Match: A0A6J1I882 (probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471848 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10 Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of HG10000877 vs. ExPASy TrEMBL
Match: A0A6J1E125 (probable transcription factor At4g00610 OS=Momordica charantia OX=3673 GN=LOC111025438 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06 Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of HG10000877 vs. TAIR 10
Match: AT4G00390.1 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05 Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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