HG10000850 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000850
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger CCCH domain-containing protein 13-like
LocationChr09: 10128176 .. 10139196 (+)
RNA-Seq ExpressionHG10000850
SyntenyHG10000850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGAGTCACGTAATGATCCTCCTCCTGTATCTTGCAGATTACAAGGTATGCTGTCTTATAATTCTGTTCTCCTTGGTGTAACATTCTTCTCAACTGTGACTGCTGCGATCATGCTACCTTTTGCTGAGATAGCTTGCGAGATATATTATTCTAGTTTGCACTCTCTCCATAGGCTTTGCAAACTACTTGTTTGTCATTCTTTATCATCACTTTGACACAGAAGTATCTTGTTAACTTGGACTTATTGCTCTTGCATTTTCAGTTTAGGGCAGTTCTTAACAGCTCTTTAGAGATCAATAAGACACGGAAGAAAAGTTTGAGAATAAGGGTTTTTTTAAATAATTAGAAATATATTTCTTTGTTGTCTGATATTTGTAGAAGCGAGAGAATTTAGAGTTAATGCTGAAGGGAGTGTGGTTAACAGAAATGTTCATTAAATAGCTCTGTATTAAGCTATAATAACTACAGCCTCCAGGTTTCATTTTAAGATAGATTTTACAAAGTCAACTAATCACTCTCATTGGCCTGGATTTTATTTATTTATTTACTTATTTATTGCTCTGGTCTATTCCTTCATGTTTTTTAATAAGTTGCTTTTTTCTTTAAAAAAATATTATTTCATGCTTCATAATATTGTTTTTGTAAATACAATTATGCTCCCTTCTAGCCTACAATTATTTTAAAAATATTATTTCTTGCTTTATAATATTGTTTTTTAATCAAATTAATGTATTAGTTCTTCGTTAAGTTTTTAAGTTTGGCATTTCTTATGATTTGTGGTATCTTTAATTCTCTTTACCTTTTTCTTCTAAATTTTCAAAAAGAACAAAAAGTTAATACAGTTATTTCAAGCTCAGTAGGAATATATCTTTCTTATTTCTGCCTTTCTTTCCCATTTTATGAATGTTTCTTTTTGTTGCTTTAATTAACAGTTTCTTCTTAAAAAAAATTTATTTTCCATTTTTATCTTTTATTTTTTCCCTTATTATTTAAATTTTTTTACTGCACCTGCTTCAACTTTAAAGAACAATTGACACCTCAGTGCATATACACGTTATAAACAAAACAGATTCATGGCTTTGTTTCCAAAGAGAAACAGATTCATGGCGTTAATTATCTTTTAAGGGGAAAAAAAGCTTCATGAAACCCATCTTGTCTCGATAATGCTATCTGTATGTATTGCTGATACTTGATATTGAGAAGTATAACTTTGAGATAAGCATGTCTATCTACTAAATTTTATTGTCTGCATAAAATGCAAATTTTTTTTTCAGGGAAACCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAGTGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGGTAGATAAAAATGGTGAAAGTTCACAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACACGTTATTGCTACAAATAGGCAGGTAAAATGCATATTTCATCATCATTTTTTCATTAAAGCAGTTAAAAACATTACTACCTACATGTTTTAAACTATCTATGGTGACAAAAGCGAAGGAGACAACAAAAGAAGAGCCTTTTTCTCTGTCTCGGTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGAATAAAAAGCTGACTTTCAAGCAAACCAACAAAGAAGAGTAGCACATTGGTTGATTGGTGTTAGTTTTATCGGCAAGGAAAACTGACCATTTGGTTTTGGTTAGTTGGAAACCAGCCATCTGTAAAGATTTGTATAAATTGACTGATCATTTATTGTTTGGTTAGTCATTTTTAGCCAGACTCAAGATTGAGAGTGAGTGAGGTAAAGAGAGGCTGATGGATGCTGGAGGTAGACAAATGTACAGTGTGCTAACTACTGCATTGTTGAAAGAACTAAGATTGGGGAGTTCTTTCTCCATCTGCCTTTTCATGAGAAGGACCATTTCTTGTGGCTTGCTAGGATGTGCGCTATCATGTAGAATCTTTGGGGTGAAAAGAATAATAGTGTTTAGAGGGTTGAAAAAGGATCTAGTGATGTTTGGTCCTTCATTTGGTTTCATGTTTCTCCTTGGTCTTGTAAACCTCATCTTCTTGCATTCTCTTTTTGTTTTTCTATCTATGAGAAGTCTTTGCTTATCCATCTTTAATGAAAAAATCTTGTTTCTTGTTAAAAAACAATGTCAAAGATGTAAAGGCCCTTTCTAAAATGGTTTGGCCTAAATTTAAGGCATAATTTAAGTTCCACGGGTGCATGGAACTTAAATTTAAGGCATAATCTTACAGAGTTGGAGATTTTGAAATGGGCTTCTCTTTCCTCATATTTGACTTCCATTAGATTGCGAAACTCTCCTGATACTTGGTTGTGGCCTCTCGACCCCTCATCAAAATTCACTGTCAAATCTCTTATGGCTGATTTAGTGGGTACAGTGGATTGTGTTTTATCTGATCTTTATTATGTGATTTGGAAAGAAAGATACCCAAAAAAGATAAAACTTTTTCTATGGGAGCTTAGTTGGGGTGCCATAAATACCGCTGATCGTTTGCAGCGCCGCTTCCCTCATTGGTCTCTGTCTCCATCTTGGTGTCTGATGTGTTGTAATCATGCTGAAACACCGACTCACCTGTTTTTACAATGTTCCTTTGCTAGCAGTTTCTGGAACATTGTTTTGCCTGCTTTTGATTGGTCTTACACGCGACCCAATAATATATCAGACGCATTGTCATCTCTATTGTGGGTCATCCATTTGGTGGTACCAAGAAAACAATTTGGTAGGCTCTTATTCGCGCTTTCCTCTGGAGCCTTTGGGGTGAACGGAATAGGCGGCTCTTTCATGATTCTCTCTCCTCTTTCAATCGCTTTATGGAACTTGTTTTATCTATTGCTTTTTCTTGGTATAAAACAAAGCATCCCTTCACTCATTATAGTTTATCCTTTTTAATCAGTAACTGGCTATCCCTCCTGTAACTTGCTTTCTCTGGGGAATATATAAACCCCTTATTACTATTAATAAATGTTTCTTTTACCAAAAAAAAAAAATGGTTTGGCCTAGTGGTAAATAAAAAGGTTTAAGTTGGATAAAGGACTAAGAGGTAATGGGTTCAATCGATGGTGGTCGCCTATCTAAGATTTTTAATATCCTACAAGTTTCCTTGACACCCAAGTGTTGTAGGATCGGGTGGATTGTCCCTAAAAAGATGTCAAAGATGTAAAGACAGATGCAACCCATGGCAAGAAATCAGCAAAACCAGAGACTTCTTTGAGAAAAACAAAAGATTTAAGCTTGGGAATGGGAGAGAAATAATATTTTTGGGAGGATTGGTGGGCCAATTCCAGCCCCCTGAGCACCATTTTCCCCTCCCTCCATACAGTAGCAAACTCCAGATTTTCTGTCTGTAAGGACTGCTGGTCTGAATCTAACAAGGCCTGGAATTTACATTTTAGAAAGGGTCTTTCAGACAGAGAATTGAATGAATGATTAACTTTCACTATTTGGTCTGTATTATTTATCATCACCAGTTGTGTTTGTCTCTTTTATTTGTCTTCTAATTGAAAGTTTGTATTTTGGAGCATTAGTCTCTTTTCATTATATCAATGAAATTTTTTGTTTCCTTTAAAAAAAAAACCATTCCACAGAATCTATTGCTTGAAATTTAGACTCCTCTGAAGCCTTTTTGGCCAAATCAGCCACTTAGGCCCTCCATTCAGGGTCATCTTTTCTGGCCACTTATCTAGCTAAACTGATTTAGCAAGGTAACGGCCCCAAGAAATTATAATTTTTTGTGGTCCACGACCCATGCCAACCTTAATAACCATGGACAGAGTGCAAAGGAGAAATCCTAACTTGATTTCATCCTCGAATATTTTTTTCAAGTGTAGGAGTGCAGAATCTAATGGTTGTCTGCCCGTTCGCTTATAAAAGCTTGAATTTATTGTCAATTGTTATGATATTGTGTGGTCTTCCAAAGAATATAGAAGATCGCCTTATTGAATTACTCTACGGCTGGTGGTTAAAAGGAAGATTCAAAGTGATTTGGTCTAATGCAGTCACTCTTTGGTATATTTGGAAAGAACAAAATTCTAGACCTTTCTCAAATAAGCATAACTCTTTTTATTTCTTTTATCAATTTTTGAGACCGCTTACTGTATACAGCATCAAAATGGAATGGAGTGCCCTTACAATTCCTTTCTAACTCACCTCTTTTCTTGATCAACTTAGATAGGAGGCCTTTTGTTTAATTCCTCCTTTTAGCCTCAGGGATTTCTCATCCTTTTTGTTAAAAATATATTTCTTTCATCATTTTTCTTCGTCTTCGTCTTCGTCTTGGTTTTTTTATTTTATTTTTTTATTTTATTTTTACCTTTTAAAAAAAAGTAGCAGGAGAAAAAACATCCTTTTTCTTTTTTCTTATAGTTATTTATCTAAACCTGAAACTCAAATTTTGTTTCTTCTTCGCTGGTGTTTTTGAGATGGTGCAAAATGTGACTCCGCATTGTAACACTAGGTGTATTTTCTGTTGTTTCTTCTTCGCTAGTGTTTTAAATACCAATTGGAGGCCACTTCTATTTCCATAAAGTAAAGAGAAAAAAGTAAAACTGTTAAGGTCTTTAAGTAATGTGTGCAGGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTTGTTGCTGGTATGTAATGTTCGACTGTATTCTAGTTCATTGAACTGATGGATCTATGAGAAATAAAGCAGGTTGTTGTTCTATTTTGTTTTCTAGTTCTCATGCATACAGGCTACTGTCGGCTAACAGCTTCTCCACCTCCACCTGCAATCCAGGAGTTGCGTGCAACCATCAGAGTATTACCCCCACAAGATTGTAAGCCTGTTTAACTTTGTCTTGTTCAGTAGTGGCCAAGTTTGTTTTTGTTTGTTTTTTGAAAGGAAACAAACTTTTCATTGATGAAATGAAAAGAGGCTAATGCTCAAAATACAATGACACAAATAAATAATAATACAAACTTAACTTAGCAAAACATAAGACCTATTCAGGAAAAATAAATGCGTTCTAATTTAAACATAAGTCGTGAATAGAAAAGCTTGCAAATAACTTGGACATTGAACACCATGAGGAAGCTTTAATTCGAGCTAATTCAAAACACTCGGACCACTAAGAAGGTTTATCTTGAAAGACCCGTTGGTTACATTCAAACTAAATTTCAGCAAGAATAGTTTTCACCATATTAACCCATAAAAGATAAGAATTGGGCTTCGAAGGAGGGCCAACCAATTAGCCTTAAAGCAAATCCATCAAAAAACCATTGAATATATATATATATATATATATATATATATTTTTTTTTTTTTTGAAAAGGAAATGAGATCTTTCATTGATATAATGAATATAGTCTGTTGCTCAAAATACAAGATATAAAAGCTGAAAATAAAATTTCAAATAAAAGATACAAACTAAGTTAAACAGAGAAAATGAAAGCATTCCAATTAAAACTAATGTCTTGAATAAAATAATCTGAAAAGCTTTGGATCGGGAACACCATGAGGAGGCGAGATGACAGACGGGATCCAGATGAACAAACTAAGAGAATGATTTATCATGAGAAACCTGCTGATTACGTTCAAACCAAATCTCAGACAAAAGAGCTTTAATTGTGTTGGACCATCAGATCTGAGAGCTGGTGGCCAAAGGAGGGCAACCAAAATCTGAAGTATGTTATCTTGAAAAGAATTAGCAAAACTTAGAGAAAAGGATGATTGAGCGAAACAACACTCAGAGAAAAGGAGAAAAAGTGTTGAAGGTCTTCACCCTAATCCAAACATAGGGGGCACATAGAGGGAGAAAGACTTTGTTGTTGAAGCTTGTGTCGAAGAGTGGCAGAACAATTAAGTGATCCAAAAAGCATACGCCAAACAAGAATATTAACTCTCTTTGGACTTTTGGATTTCCAAAGGGCCTGATAAATGTCCTTGTCTAAAGGAGAGGCAACAATTAGGTGCTTGTATAAGGAAATAACCGAGAAGCTTCCAGAAGAATTCAACACCCAACGTCTTGCATTTTGAGAAGAAGAAATCTGCTTGATATCTAAACACATGGACACATAAAAACTCAAACCCCAAATCAGCAGCAATGTTGGAGAGTGTTGACGTTGGTCAGAATAGCAACATTGGTCTGTGGCGGTGATAGAGTAGTGGCAAAGGGAGGGAGATCGAAATGGATCATGAGGGAGGAGAGTAGAATCGGGGAGAGGGGAGAACAAAATTGGGGGTAGGGGGAAGAGTAGAATGGGGTGGCTATGAAGGGAGAATGACATAATAAGGTTAGGATCTCTTGTTTTAATTGGGTTGTTGGCCCTTTTAATGTTGGTTTTATAATGGGTTGTAGTACTTTTGTCTTTATTTGGTTTTAGAGGGCAATAATTATTGGGTTTCATGCACCATTAAAATTTTAAGGGCAAATTGGAAAAACCACCCCTAAAGTATGGTGGTAGTACAACTATACCCTCAAACTTTCAGTTGTAAAAATTGAGCCCTCAAACTTACACAGGGTTAAAATTAGACCCTCAAACTTACATAATTGTAGAAATTGTAACAATGGTATAAGTTTGAGGGTTCAATTTCTACAATTTTAATGTTTCTCTTTGGGCTTTGGTCCTTGATGAGGTTTCATGTTTCTCTTTGGACTTCGGTCTTAAAGACTTTTTGTAATTACTCTTTATGTAACATTTTATTTAGTTGGAATCTTTTCTTTAGTGAGATTTTTGTGGGCTTAGTTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTCTCAATGAAAGCAGTTGTTTCTAAAAAAATGTTGTCGAAGAACATTAGTTTTTCTCTCATTTTTTCCATTTAAATGCATGGTTGTTTTTTTTTTTTTTTTTCTCTCTCCAAATCCATTTTTAATGTATTTATCTTTATTAGTTGATATTACTTCTAATTTGTGTTAGGTTACATTTCTACTCTTCGAAATAACGTTCGATCTCGTGCTTGGGGAGCTGCTATTGGTTGTAGCTATTGTGTTGAGAGATGCTGCATTGTGAAGGTAATGAAGCTTTTAAATTTTAGTTGATAGGTTCTAAAACTTGAATTTTTGGATTTAATGTAATAGATAAAAATAGTAGATCTGTGTGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGCGGGGTGCGTGTGTGTCGCTTTTACAAAATCATTATCAGAGACTTGGTCGAATTACAATTGAATACTGTTTCTTGAGTTTGGAGTGTGTTTTGTTGGATTCTCTTGCTTTAGGGAAACGCCCCCTTTCTCAATTTTCATGTTTTTTTCTCTTCTTTTGATAAGATAATTTTCATGTGTTCAAACTATCTTTCTTTAGAGAAAAAAGTGAATGTATTTTTATAGCTGTAGAAATAAATTTATTCCAAGAAAATAATTTTATCGAGTAAATTTAAAATTTTAATCTTGATATGAGTGGATTTCACTGGGTTGTCTTTGCTTATTAGCAGCTTTTGGCTCCTTCTGTTGATGGTACCACCGATATTTTTGACTTAATAGCAATTTGATCTTATTCATTAGTTTAGTTGTTAAATAAAAATTAGAACAGAACGAGATGTTTATTTTAGAGGTTGTAGTGTGAAAATATTATAGTTCAACCACACTTATTCCAGGCCACCCTTCTCTGTGTCTTCGTTTTTTCTTCCCCTATTCTGGGCCACTTTAGTCTCTGGGATCTATATAGATATTAATTATTTTTATTTAATTTTAGAGGCAATTGCAACATATTGATCCTTGTGTTATGAAGGCTTCTTTCAACTTTGTTTTTCTTTGTTTTTCCCTCTTCAGAAAGGAGGTGGGGCCATTGACCTGGAGCCATGTCTTACACATACATCTGCAGTTGAGCCCACCCTTGCCCCTGTGGCTGTTGAGCGGACCATGACTACAAGGGCTGCAGCCTCTGTAATAATTTGACATAATATTTAACCCCTTTCCTTTTTCTTGTTAACTTTTGAGGTTCTAGAAGTTCATCATTTATCTTATGATATACAATAATAAAAGTATTTTCCTGATCATACAGTAACATTGCTTCATTTTCTATATTTTGGAAATGAATAAAAGTTTGGCTGTTGACATTTGATTGATTAAATGGCTCTTAAAAAAATATGAAGTAATGTACCGCTTGATTTTATTATAGAAACAGAAAAAAAAAAAAGGCTGCAAGTAAATGGTGAAAAAGAATTTTGGCTGGCCTGCTCTTCATCTGTTTTATAAATTGTAGTTCTATTTTTACAATACCCTGCTTACTGTCTATTTCATAGCATGTACGCACTATTCTCTTAACCCATTTAAAAGTTTCAAAATTGCATATATTATTATGCACTTCAATTAAATGATATATCTACAGTCGCTATGATTTTTCACTTTCATTGTATTCTGTTTTCATTTTAATAAAATAATAGTGAATCAGTAATTTACAGTGGCATGCTATATTTTTCAGAATGCATTGCGTCAACAGAGGTTTGTAAGAGAAGTTACAATTCAGTACAACCTTTGCAATGAACCATGGTATACTTCAATCTTCTCTTTTAATACTGCGTCTGCAGGTTTCTACCAGAAAGTTAACTTACATATGCATTAGTCTTTTTCATTATTTCGATGAAAATTCTGTTTCCGTTTATTTATTTATTTTTTTGAATTATCATGTTTTGTTTTGTTTTTCTGTTTACCTTGGCTTTTATGCATGTCTCATTGCATTAAGGTATGTATATCTATTTTTTCTATTGTTATCAGTAGATCTAACACAATAAATTATATTTGAGTTTGTTGGAATGCATATACATCCTATAGCGCTGATATATATGATATTTCCTCTCCCAGACAGTTTGATCAATGAATTCTCCGAACTCCTAAACTGTGTTCAATTATCATTAATGTTCTTAAAAGACTTTTCTGGCTTTTGCCTTACCTCAAGGCTAGGCTCCAACTTAGGAACTCGATGATTCATATTCATGCTCTTTCACTACGTTATTTGATGATTTGGAATTACATCTATCACTATGGGTATATTAGTGGTCGAACGGGCGAGGTCAAGTAGTAAACACTTGGATGTTTTCTAGATGGTGTAGGATTCAACAAATGTTACAAGAGATTAGGGAGTAGCATATAACTATGAGATAGTTAGGATACCCATGTTTATCCAAAAGCAGGAAAGTACGATACATGAGGCCTTGCTTTTAAGAATTATTTTGGCTGTTACTGGCATTGTCATGACGTACTTCACAATGTTTCTTGTACAATACATAACATGCCATAATTGAATCTTGCATGGTGTGATATCCTATGTTTCTCGAACATTACATAACATGACGATATTTGAATTTTGAATTGTGTGGTATCTTAAATTTCTTGTACACTACATAACGTAGATACAATTCACTTTGTTGTGTTAATGAAATCACAGATGCATATTGCCCCGGGATTTGTCCTATATAGTTGTACAATGTTTGTATTAAATGTTCCATTTACAACAATCTCCAGGATTAAATACAGCATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCGCGGTTGAAGAAGGGAGAAGTTTTGTATCTAGAAACACATTCGTGCAGGTATTTTAAGTCCCGCCCGTGATGTTTTCCTTACCTCATTAACAAACTTTAATTTCACATGTCACTATTAGCTATTCAGTCATAATTCGATATGCGTTGTTATTCAGTCTTTAGAATTAATAATTAGTGAAATACTTCCTTCGTGAGAAAATAAATGACCTAAAAAGAATTATAACTCTATGAAGTTTGAATTGCCATTAAACTTACACGTTAGAAGGATACCATGCTACATGCATGATGTGGCAGTAAGTCGCCATCGACATATTGGTAATTCTAAATTCTAATATTTTGAAAAATGTTAAATTGATTTGACTGAATTGCCACATCCGTGAAATCATATGCAATTAATAATTTGTCTAAAAAACTACTGTGTGAAGGTATGAACTCTGCTTTTCCGGGGAGAAGATGGTGAAAACCATTGCATCATCTCAAGGGCATGAAGCTGAAGCCGAGAAATCTCAGAATCACTTTGTTCACTGCCCAAATGGTGAAAGAATTGATAACGATAATACTTTGATTGATGTGTTTCGGTGGTCTCGCTGTAAGAAGCCACTGCCTCAGAAGGTTATGCGTTCTATTGGGATTCCACTGCCTTCTGAACACGTAGAGGTACTCTCTCCAGCTTTCTTTCAATCTTTGATAGTTAAATAATGTGCTTTTTTTTATCAGAACGCTCTTTCATTTCCAATGATTTTTTTACTTCAAAGATTGCTGTGCAGTGAGCTTTCTGGTGCCTATGTGAATACACTTTTTTGCATAAAGTTGCCATGAGTTCACTTTCATGTTTCCAGTTAGCGGCATATCATATCTCATTAAATCCTAGGAGATAATCTGGGGTTGCTATGACCCAGATCATTAACTGTTGTCCAATGCCATGTTGTATAGGCGCTTCAAGAGATGGAAGTAGACTTTTCTTTCAGTGATGATTTCATTTATCATATTACGATCATTACTGGTTACATATTTAGATCATTTCATAGAAGAGATAAGATAAATTGGACAACATGGCTTTGCAAATCTCCATCTTTGTTGTAATTGCTGTTGGACTTGTAGACAAGTTTATACAGTCTCGGTTTCTCATTTAGTAGCTGATAAACGTATGATAAGATTGAATTACCAACTATAACTCAGCAGTTAAGGCATCTACTCCTTCCTTTACGGTGGGAGCTTCAAAATCTCTGCTCGTATATTTGCTGTAAGCCATCCGATTGACTTACTAGGCATTTGTCTCTTTCTAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGTGTTTGGATAGCTGGGAAAGAATATCTACTTGCTCGGGTGCATTTCCTATCCATGAATTAG

mRNA sequence

ATGATCGAGTCACGTAATGATCCTCCTCCTGTATCTTGCAGATTACAAGGGAAACCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAGTGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGGTAGATAAAAATGGTGAAAGTTCACAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACACGTTATTGCTACAAATAGGCAGGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTTGTTGCTGGCTACTGTCGGCTAACAGCTTCTCCACCTCCACCTGCAATCCAGGAGTTGCGTGCAACCATCAGAGTATTACCCCCACAAGATTGTTACATTTCTACTCTTCGAAATAACGTTCGATCTCGTGCTTGGGGAGCTGCTATTGGTTGTAGCTATTGTGTTGAGAGATGCTGCATTGTGAAGAAAGGAGGTGGGGCCATTGACCTGGAGCCATGTCTTACACATACATCTGCAGTTGAGCCCACCCTTGCCCCTGTGGCTGTTGAGCGGACCATGACTACAAGGGCTGCAGCCTCTAATGCATTGCGTCAACAGAGGTTTGTAAGAGAAGTTACAATTCAGTACAACCTTTGCAATGAACCATGGATTAAATACAGCATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCGCGGTTGAAGAAGGGAGAAGTTTTGTATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGGGAGAAGATGGTGAAAACCATTGCATCATCTCAAGGGCATGAAGCTGAAGCCGAGAAATCTCAGAATCACTTTGTTCACTGCCCAAATGGTGAAAGAATTGATAACGATAATACTTTGATTGATGTGTTTCGGTGGTCTCGCTGTAAGAAGCCACTGCCTCAGAAGGTTATGCGTTCTATTGGGATTCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGTGTTTGGATAGCTGGGAAAGAATATCTACTTGCTCGGGTGCATTTCCTATCCATGAATTAG

Coding sequence (CDS)

ATGATCGAGTCACGTAATGATCCTCCTCCTGTATCTTGCAGATTACAAGGGAAACCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAGTGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGGTAGATAAAAATGGTGAAAGTTCACAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACACGTTATTGCTACAAATAGGCAGGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTTGTTGCTGGCTACTGTCGGCTAACAGCTTCTCCACCTCCACCTGCAATCCAGGAGTTGCGTGCAACCATCAGAGTATTACCCCCACAAGATTGTTACATTTCTACTCTTCGAAATAACGTTCGATCTCGTGCTTGGGGAGCTGCTATTGGTTGTAGCTATTGTGTTGAGAGATGCTGCATTGTGAAGAAAGGAGGTGGGGCCATTGACCTGGAGCCATGTCTTACACATACATCTGCAGTTGAGCCCACCCTTGCCCCTGTGGCTGTTGAGCGGACCATGACTACAAGGGCTGCAGCCTCTAATGCATTGCGTCAACAGAGGTTTGTAAGAGAAGTTACAATTCAGTACAACCTTTGCAATGAACCATGGATTAAATACAGCATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCGCGGTTGAAGAAGGGAGAAGTTTTGTATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGGGAGAAGATGGTGAAAACCATTGCATCATCTCAAGGGCATGAAGCTGAAGCCGAGAAATCTCAGAATCACTTTGTTCACTGCCCAAATGGTGAAAGAATTGATAACGATAATACTTTGATTGATGTGTTTCGGTGGTCTCGCTGTAAGAAGCCACTGCCTCAGAAGGTTATGCGTTCTATTGGGATTCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGTGTTTGGATAGCTGGGAAAGAATATCTACTTGCTCGGGTGCATTTCCTATCCATGAATTAG

Protein sequence

MIESRNDPPPVSCRLQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNRQVRGGQLWGTDVYTYDSDLVAGYCRLTASPPPPAIQELRATIRVLPPQDCYISTLRNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN
Homology
BLAST of HG10000850 vs. NCBI nr
Match: XP_038900584.1 (zinc finger CCCH domain-containing protein 13 [Benincasa hispida] >XP_038900585.1 zinc finger CCCH domain-containing protein 13 [Benincasa hispida] >XP_038900586.1 zinc finger CCCH domain-containing protein 13 [Benincasa hispida] >XP_038900587.1 zinc finger CCCH domain-containing protein 13 [Benincasa hispida])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 347/357 (97.20%), Postives = 350/357 (98.04%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHESSQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 452 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQMDKNGESSQNIPTLEIRIPAEHVIATNR 511

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 512 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 571

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAP+AVERTMTTR
Sbjct: 572 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPLAVERTMTTR 631

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 632 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 691

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVKTIASSQGHEAEA+KSQNHFVHCPNGER DNDNTLIDVFRW RCK
Sbjct: 692 HSCRYELCFSGEKMVKTIASSQGHEAEADKSQNHFVHCPNGERTDNDNTLIDVFRWCRCK 751

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN
Sbjct: 752 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 808

BLAST of HG10000850 vs. NCBI nr
Match: XP_008460844.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase G isoform X2 [Cucumis melo])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 347/357 (97.20%), Postives = 348/357 (97.48%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHELSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVKTIASSQGHE EAEKSQNHFVHCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFVHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

BLAST of HG10000850 vs. NCBI nr
Match: XP_011649442.1 (zinc finger CCCH domain-containing protein 13 [Cucumis sativus] >XP_011649443.1 zinc finger CCCH domain-containing protein 13 [Cucumis sativus] >XP_011649444.1 zinc finger CCCH domain-containing protein 13 [Cucumis sativus] >XP_011649445.1 zinc finger CCCH domain-containing protein 13 [Cucumis sativus] >KGN62230.1 hypothetical protein Csa_016917 [Cucumis sativus])

HSP 1 Score: 707.2 bits (1824), Expect = 7.3e-200
Identity = 344/357 (96.36%), Postives = 348/357 (97.48%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGK EVSSV+YKVGECMQELIKLWKEHESSQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKSEVSSVIYKVGECMQELIKLWKEHESSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVKTIASSQGHE EAEKSQNHF++CPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

BLAST of HG10000850 vs. NCBI nr
Match: XP_023512325.1 (zinc finger CCCH domain-containing protein 13-like [Cucurbita pepo subsp. pepo] >XP_023512327.1 zinc finger CCCH domain-containing protein 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 701.4 bits (1809), Expect = 4.0e-198
Identity = 338/357 (94.68%), Postives = 349/357 (97.76%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGEC+QELIKLWKEHESSQ++KNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKPEVSSVVYKVGECVQELIKLWKEHESSQIEKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATI+VLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIKVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGG+IDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGSIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVK IA+SQGHE+EAEKSQNH +HCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKAIAASQGHESEAEKSQNHIMHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEH+EVLEDNLDWEDV+WSQTGVWIAGKEY+LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHMEVLEDNLDWEDVRWSQTGVWIAGKEYVLARVHFLSMN 807

BLAST of HG10000850 vs. NCBI nr
Match: XP_022973807.1 (zinc finger CCCH domain-containing protein 13-like [Cucurbita maxima] >XP_022973808.1 zinc finger CCCH domain-containing protein 13-like [Cucurbita maxima])

HSP 1 Score: 701.0 bits (1808), Expect = 5.2e-198
Identity = 336/357 (94.12%), Postives = 349/357 (97.76%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHESSQ++KNGESSQNIPTLEIRIPAEH+IATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIEKNGESSQNIPTLEIRIPAEHIIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATI+VLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIKVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGG+IDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGSIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSIS+VADKGLKKPLYT+ARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISVVADKGLKKPLYTAARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVK IA+SQGHE+EAEKSQNH +HCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKAIAASQGHESEAEKSQNHIMHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEH+EVLEDNLDWEDV+WSQTGVWIAGKEY+LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHMEVLEDNLDWEDVRWSQTGVWIAGKEYVLARVHFLSMN 807

BLAST of HG10000850 vs. ExPASy TrEMBL
Match: A0A1S3CCW4 (peptidyl-prolyl cis-trans isomerase G isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499596 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 347/357 (97.20%), Postives = 348/357 (97.48%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHELSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVKTIASSQGHE EAEKSQNHFVHCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFVHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

BLAST of HG10000850 vs. ExPASy TrEMBL
Match: A0A0A0LJZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337260 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.5e-200
Identity = 344/357 (96.36%), Postives = 348/357 (97.48%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGK EVSSV+YKVGECMQELIKLWKEHESSQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKSEVSSVIYKVGECMQELIKLWKEHESSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVKTIASSQGHE EAEKSQNHF++CPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEY LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

BLAST of HG10000850 vs. ExPASy TrEMBL
Match: A0A6J1IE82 (zinc finger CCCH domain-containing protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111472361 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 2.5e-198
Identity = 336/357 (94.12%), Postives = 349/357 (97.76%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHESSQ++KNGESSQNIPTLEIRIPAEH+IATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIEKNGESSQNIPTLEIRIPAEHIIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATI+VLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIKVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVKKGGG+IDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGSIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSIS+VADKGLKKPLYT+ARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISVVADKGLKKPLYTAARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           HSCRYELCFSGEKMVK IA+SQGHE+EAEKSQNH +HCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HSCRYELCFSGEKMVKAIAASQGHESEAEKSQNHIMHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
           KPLPQKVMRSIGIPLPSEH+EVLEDNLDWEDV+WSQTGVWIAGKEY+LARVHFLSMN
Sbjct: 751 KPLPQKVMRSIGIPLPSEHMEVLEDNLDWEDVRWSQTGVWIAGKEYVLARVHFLSMN 807

BLAST of HG10000850 vs. ExPASy TrEMBL
Match: A0A1S3CDT5 (uncharacterized protein LOC103499596 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499596 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 5.6e-198
Identity = 347/378 (91.80%), Postives = 348/378 (92.06%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQ+DKNGESSQNIPTLEIRIPAEHVIATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHELSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVK---------------------KGGGAIDLEPCLT 194
           RNNVRSRAWGAAIGCSYCVERCCIVK                     KGGGAIDLEPCLT
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKEFGCSSAGCSVDDRGVSSPKEKGGGAIDLEPCLT 630

Query: 195 HTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKG 254
           HTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKG
Sbjct: 631 HTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKG 690

Query: 255 LKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCP 314
           LKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHE EAEKSQNHFVHCP
Sbjct: 691 LKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETEAEKSQNHFVHCP 750

Query: 315 NGERIDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGV 367
           NGER DNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGV
Sbjct: 751 NGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGV 810

BLAST of HG10000850 vs. ExPASy TrEMBL
Match: A0A6J1G6W1 (uncharacterized protein LOC111451415 OS=Cucurbita moschata OX=3662 GN=LOC111451415 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 7.4e-198
Identity = 337/357 (94.40%), Postives = 344/357 (96.36%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQ+DKNGES QN+PTLEIRIPAEHV ATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPTLEIRIPAEHVTATNR 510

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTDVYTYDSDLVA     GYCR TASPPPPAIQELRATIRVLPPQDCY+STL
Sbjct: 511 QVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDCYVSTL 570

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGAAIGCSYCVERCCIVK+GGG IDLEPCLTHTSAVEPTLAPVAVERTMTTR
Sbjct: 571 RNNVRSRAWGAAIGCSYCVERCCIVKRGGGTIDLEPCLTHTSAVEPTLAPVAVERTMTTR 630

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET
Sbjct: 631 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 690

Query: 255 HSCRYELCFSGEKMVKTIASSQGHEAEAEKSQNHFVHCPNGERIDNDNTLIDVFRWSRCK 314
           H+CRYELCFSGEKMVKTI +SQGHEA+AEKSQNHFVHCPNGER DNDNTLIDVFRWSRCK
Sbjct: 691 HACRYELCFSGEKMVKTIVASQGHEADAEKSQNHFVHCPNGERTDNDNTLIDVFRWSRCK 750

Query: 315 KPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 367
            PLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN
Sbjct: 751 MPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVHFLSMN 807

BLAST of HG10000850 vs. TAIR 10
Match: AT5G08450.1 (CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). )

HSP 1 Score: 575.1 bits (1481), Expect = 4.0e-164
Identity = 286/365 (78.36%), Postives = 313/365 (85.75%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+G+ + N PTLE+RIPAEHV ATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTD+YT DSDLVA     GYCR TASPPPP +QELR TIRVLP QD Y S L
Sbjct: 617 QVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQDYYTSKL 676

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGA IGCSY VERC I+KKGGG I+LEP LTH+S VEPTLAP+AVER+MTTR
Sbjct: 677 RNNVRSRAWGAGIGCSYRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTR 736

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPL+TSARLKKGEVLYLET
Sbjct: 737 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSARLKKGEVLYLET 796

Query: 255 HSCRYELCFSGEKMVKTIASSQ---GHEA-----EAEKSQNHFVHCPNGERIDNDNTLID 314
           HSCRYELCF+GEK +K I +SQ    HEA        KSQNH     NG++ D+DN+LID
Sbjct: 797 HSCRYELCFAGEKTIKAIQASQQQSSHEAMETDNNNNKSQNHLT---NGDKTDSDNSLID 856

Query: 315 VFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVH 367
           VFRWSRCKKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVH
Sbjct: 857 VFRWSRCKKPLPQKLMRSIGFPLPADHIEVLEENLDWEDVQWSQTGVWIAGKEYTLARVH 916

BLAST of HG10000850 vs. TAIR 10
Match: AT5G08450.2 (CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 575.1 bits (1481), Expect = 4.0e-164
Identity = 286/365 (78.36%), Postives = 313/365 (85.75%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+G+ + N PTLE+RIPAEHV ATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTD+YT DSDLVA     GYCR TASPPPP +QELR TIRVLP QD Y S L
Sbjct: 617 QVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQDYYTSKL 676

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGA IGCSY VERC I+KKGGG I+LEP LTH+S VEPTLAP+AVER+MTTR
Sbjct: 677 RNNVRSRAWGAGIGCSYRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTR 736

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPL+TSARLKKGEVLYLET
Sbjct: 737 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSARLKKGEVLYLET 796

Query: 255 HSCRYELCFSGEKMVKTIASSQ---GHEA-----EAEKSQNHFVHCPNGERIDNDNTLID 314
           HSCRYELCF+GEK +K I +SQ    HEA        KSQNH     NG++ D+DN+LID
Sbjct: 797 HSCRYELCFAGEKTIKAIQASQQQSSHEAMETDNNNNKSQNHLT---NGDKTDSDNSLID 856

Query: 315 VFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVH 367
           VFRWSRCKKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVH
Sbjct: 857 VFRWSRCKKPLPQKLMRSIGFPLPADHIEVLEENLDWEDVQWSQTGVWIAGKEYTLARVH 916

BLAST of HG10000850 vs. TAIR 10
Match: AT5G08450.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). )

HSP 1 Score: 575.1 bits (1481), Expect = 4.0e-164
Identity = 286/365 (78.36%), Postives = 313/365 (85.75%), Query Frame = 0

Query: 15  LQGKPEVSSVVYKVGECMQELIKLWKEHESSQVDKNGESSQNIPTLEIRIPAEHVIATNR 74
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+G+ + N PTLE+RIPAEHV ATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 75  QVRGGQLWGTDVYTYDSDLVA-----GYCRLTASPPPPAIQELRATIRVLPPQDCYISTL 134
           QVRGGQLWGTD+YT DSDLVA     GYCR TASPPPP +QELR TIRVLP QD Y S L
Sbjct: 617 QVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQDYYTSKL 676

Query: 135 RNNVRSRAWGAAIGCSYCVERCCIVKKGGGAIDLEPCLTHTSAVEPTLAPVAVERTMTTR 194
           RNNVRSRAWGA IGCSY VERC I+KKGGG I+LEP LTH+S VEPTLAP+AVER+MTTR
Sbjct: 677 RNNVRSRAWGAGIGCSYRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTR 736

Query: 195 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLET 254
           AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPL+TSARLKKGEVLYLET
Sbjct: 737 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSARLKKGEVLYLET 796

Query: 255 HSCRYELCFSGEKMVKTIASSQ---GHEA-----EAEKSQNHFVHCPNGERIDNDNTLID 314
           HSCRYELCF+GEK +K I +SQ    HEA        KSQNH     NG++ D+DN+LID
Sbjct: 797 HSCRYELCFAGEKTIKAIQASQQQSSHEAMETDNNNNKSQNHLT---NGDKTDSDNSLID 856

Query: 315 VFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNLDWEDVQWSQTGVWIAGKEYLLARVH 367
           VFRWSRCKKPLPQK+MRSIG PLP++H+EVLE+NLDWEDVQWSQTGVWIAGKEY LARVH
Sbjct: 857 VFRWSRCKKPLPQKLMRSIGFPLPADHIEVLEENLDWEDVQWSQTGVWIAGKEYTLARVH 916

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900584.11.0e-20197.20zinc finger CCCH domain-containing protein 13 [Benincasa hispida] >XP_038900585.... [more]
XP_008460844.12.3e-20197.20PREDICTED: peptidyl-prolyl cis-trans isomerase G isoform X2 [Cucumis melo][more]
XP_011649442.17.3e-20096.36zinc finger CCCH domain-containing protein 13 [Cucumis sativus] >XP_011649443.1 ... [more]
XP_023512325.14.0e-19894.68zinc finger CCCH domain-containing protein 13-like [Cucurbita pepo subsp. pepo] ... [more]
XP_022973807.15.2e-19894.12zinc finger CCCH domain-containing protein 13-like [Cucurbita maxima] >XP_022973... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CCW41.1e-20197.20peptidyl-prolyl cis-trans isomerase G isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A0A0LJZ23.5e-20096.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337260 PE=4 SV=1[more]
A0A6J1IE822.5e-19894.12zinc finger CCCH domain-containing protein 13-like OS=Cucurbita maxima OX=3661 G... [more]
A0A1S3CDT55.6e-19891.80uncharacterized protein LOC103499596 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1G6W17.4e-19894.40uncharacterized protein LOC111451415 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
Match NameE-valueIdentityDescription
AT5G08450.14.0e-16478.36CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR0139... [more]
AT5G08450.24.0e-16478.36CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR0139... [more]
AT5G08450.34.0e-16478.36FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000850.1HG10000850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016575 histone deacetylation
molecular_function GO:0016853 isomerase activity