HG10000848 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000848
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Vesicle transport protein
Location	Chr09: 10102668 .. 10118704 (+)
RNA-Seq Expression	HG10000848
Synteny	HG10000848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCCGGAAACGGAATCCAGTGCCGGAAAAGTGGAGTTGAAGAAGAAAGATGAGCGTCGATGGCGAGTGCGACTGCAGAAATGGAGCAAAGAAAAGCGAAGCGAGTGAGTGACAGTGATCGCGAGAGTGAACCGAGCGAAATGAGGACAAGAGAACACCTTTAAACTCGTCTCATTCGTACGGCTCCGGACTCCAAATAATTATCAAATACAATTTAATCTTAATCCTTCATGCTTAATTCCCGCAACCTTGATAGATAGGCGGTTTTGAAAATTGTCGAAATACGTTTTTCTTCCAGAAGTGTTTTTTTTAACTTTTTTTTTTTTTATATACATTTTTCATCTAAAAGTTCAAATATTATATCCACGAAAATTATAATGGATGAGAATTTGAATATGCTTTATGATAAATATGTTAAAAATTTTAAATTTGTATTTTAAATTATTTTATATTTTATATTTGCCTTCAATAATCAATTGATAAAGAGGAAAAAGCAATTAGTGACGTGCTCTTTTATCAATTAAAAACAAACTATAAGAAAAACAATTAAAAACAAATCATAATGAATATATTGATTAGTTTAGATGGTTCGACTTAGAATATGAGAAAAAATCATAAGGATATATTGATTGTTTTTATAATGATAAATATTTTTCTGTTTATTACTATAACATGATCAAAAAAAATTATAAGGAAATGTAATCAATCCCACCAAAAGTTATAACTTATAAGCAAGAGCATGAAAATTATTAAATAAGAAAAACAAATCTACTTTACTAAAAACATTTGAAGTTTTGTTGAAAATTGGTATAATATTGACATTTAGTTGTAGGAGATAATAAGAGTAACAAAATTGTTGAGATTCCAAAACTTAGATATTTTATTATTGGTTATCATTAAAAATAAATTATAACTCTTACCCTCCGTTTGGATCCAAGAAAGTTAAAAAAATGGTTTTAAATCCGATGATTTGAAATCCGAGAAATAATTTTAAATTAATTACTTTGTTTGGAATGATAAAATTTTTAAACGAGTGTATTTAAAATTTTGTGTTTAAATGGTAACTGAAAAGTAAAAAAAAAAAATTAAAAATTTACTAATATAGACTTTTAAATATGATGTATTAATTGAAAATTAAAATATGACTAGGTCAATTAAGTAATTTACTTTTAAATCTTAAGAAATTCTGCAAATTCCACTATTTTGGTAAGGAAAGTTTTTTTTAAAATAAAAATAGGATTTGAAATTATTTTTGGATTTTAAAATTATTCTCTTTGATAGCGTAACAAACAACGAAATTCATTTGAATTGAAGACTTAACTCCACATTATTATTCAATAATATAACTAATTAGATAGTGATCCAACTATTATTGCTTTAAAATTACCTTTTAAAAATGTTAAATAAATAAATTTAAGAAAAATTTAAATTTCAATATTAATTATAATTAAATGTAGTTATCATAAATTTTATAATTATTTTAGAAATTAATTAAGAAAACTTTGAATTTCATATTCTTCATTTTTTCATTCTCTTACCTCTAATTATAATTAATAATAGAATTTAAGTAGTTAAATAAATTTTGAAAAATAAGAGTGTAATTATAAGTCAACATTCAACATTTTATTAATAAATAAACTCAAATAAACTTTATTTTTAAAAAAGAATGAGTGAAAGGGAAGAAAACTTCTCAGTTCGATGATGTACCTTACATCTAAGATCACATGACACTTTTATGTCTAAGTTCTTAATCCCATATTCTTTGTAAAATTTGTTTTTATCTTAACCTTTCCAATATTAAGAGTCAACTAACATATTAAATGGTCGGTTTAACTTGACAATATATCATTTTACTCAACAAAGAAAATAGAAATGATAAGTGAAGTGATGTGATAACATTAACTAAAACCATATTATCTTAGGGTATCCACATGACCAGATCACTTAGAAAATTAGACCATAACTAGAGAAGAATGAACAAACTTCAGTAATGCAAAAGTACGTCATGAGATACAAGTATCGATTACAAGAGTATACAGTAAGAAACATAAAAATAATAAATAATGAAATAACAAGTGCTGGAAAAATAGTAACATAAACTCTTTGAATCAAAACCTAACTTTAGAAAGGCTCGCTAGAATGGATTCAACCTCTTTTAAGGGTGAATCATCACTCTACACACACTCTCATAGTAGGGAGAACTTGTAAACTATGGTTCTCCAAAGAAACTCTTGCTCTTGAAGAATTTCTAGATGTAACTTGTCATGAGATCTCTTATTAGAAGTGGAGATTGTTGAATAATGAGATTTTTAATCCTTTATATAGGCTAAGGTATGTGAGGAATGACCGAAATACATGCCTTATATGTCCCCTAGGTAGTTTTCAGAGTTGAAAAACGATTATGGACCAAAAAAACCAACAAATTTGAACGACTAAGCACGATTGAACTAAAATCAGGGTTTTAATGCAAAAACAATAAAAACATTGTAAAAACTCATGAAATTGCTTTTAAAAAAATTAAACTAACTTCAAGCAGTTCAAAGACGAGTGTTTGCTCATTTTAGCCATTTTAAGATCAAAATATCATATGAAATTCATCTATTACTAGAAAAGTAGCAAAATTTATAACGAAATTTATAGCGAAATCATGCACTTTGTGACGTTTATCACATTTGCATTTAAACACCTTTTTTAAAAAAAAAAAAATAAAATGGTTCAAAATAGAGTGTTTGGTTACATTATCTCGAAGTGCTTCTATTATTGTCAAATTAATATATAAGACGACTATTATATACTATGAATTAATAATTTCAAATTTGTATTTAAGAACACTTTCATTGGCCAATTTTGTTTGTTTTTGTTGCTACTTTTTTTTAGTGTATGATTGGCTAAGTTGGTTGTTAGAGTTAGTCGTTGAAGATGATCGATAGAGTTGGTGGTCGGAGTTGGTCGTTGAGGCAAGTACGGAATATATTGTTATCGATATAAATATCAGTAAGTCAGATTTACAGATATATCGATGGATATTTCAGGAAAAATCACGGATATCACAAACATTTATAAAAATATTGTGAACTTGTTAGTGAAAATTCATAACAAACTAATTTAAATAATAACTTATGACTTTAAGTATATAAATCAATAATTAGAGGCCAAGTATGGTTGGTAATGAAATAATAGATAATAATGAAGACCAAAAAATGATTATGAACAAAATATTTCATTAATAAAGTATAGGTCATACAAAATGAAGGTCAAATACAAGATTCAATAATAAAAAGATGATTTAGGAGGTACTGGCCCAACATTAGCATAATTGATTTGATAATGACAATATTGCTCCCATGTCATTATATGTTCAAAATTTCTAACATAATAGAAAGTATGTCATCCATGAGTTTCGACACTAACCTCGATGCTACCAATAGGAGGATACCTTGGATTAAACTATGTTCCACACAAATGAGAATGCTTTGAAGAAAGTAGATAATATAGAGGCTTAGAGTCAAAGTCTTAATCACGTTCACGAGGAAGTTGCGGTCCTTGTGTATAGATTACTATGTTAAAATCCATTACTATAACCACAAGAGCTATAATCACTTAAATGATTATAGTTACTATGGGAAGAGCAATAATTACTATTGGTATAGACATATTGACCATGTCCATGTTAACTATCCAAACTTATCCCCTCCATACTTGAAACAAGTGAGTTAGCATCAATAGGAGCATTCTCACGTGTGGATTTTCTATGAATGAAAGACTTCCCTATTGCTCCAATTCATGGTCTACTAGCTCTATGGTCATGGTTGGAGTCTTTGTGTGGCATGTGTGAATAAATATTCTCTAGTGAATTGACCAATTCCTTGTCCACTAGCTTTATGGTCGTGGTCGAAGTCTTTTTTTTTTTTGTGGTTTTTCCAAATTCATTTTTTGGATTGAAAATTGAGAAAAATTGAAAATTGAAAAAGGTAACACATTGAAAAAGCTTGATATTGGAAAAAGAAAAAAAAATCGATATATGTAGATAGTTAGACGACATTAGGCAAAATATCCACAAAATCTCCGCGATATATCTACAAAATATCTATGATTCTATTGAGCATATTGGCCCAAAAAGATATATCATAGAAATATATACTGAAATTTTGATAAAAAAAAAGATATTAACCCCAGTATCTCTACTGGATATGTGATTTTATGGATATCTCAACGATATATAGTCAATATATCGTGAATTTTTCATTATTGGTTGGAGGCGATCATCTAAATTGACCGCCAGAAGTGGTAGTCGCGCAACTGACATTGGTTATTGCTGAAGTTGGGCGACAGAGTTAATCGAGTCATGAGAGCATGTCATTAAAGTTGGTTGTCGATGGTGACTGACAGGTGAAGTCATTGTAAACATTAGAAAGAGGGAGAAAAAGAGATGAAGATAGAGTTATTCATAAATGTTAGAAATTTTATTCAACTTAGATTACATTTACTCTAATGAAAAAATAATAAATCAATAGTAATACGAATAGTAGCTCGATTTAATAAATCATCGAGAGAGTTGGACTCGCAGTAAAGAGCCCACACCTCAAAATCTGTGAACGACCGTGGTGGACCCCGACGGCGACGGGTGAAGGGGTTGCTGGTGAATTGGGTGACTGCTGGTGGCAAGTTTTTGCTTCAATCAGCTCAACTATCCATTTTGCACATTCCTTTGCCTTAGATCTCTCTCAATTTCCCCTCTTCTTCCCAGAATTTGAAGCGGCGGCGGCTTTGTCATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGAAGAACGTCAAGCTTCTACTGCTACCATTGATGACGGCGACTCTTCCTGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCCACAAAACAGGTTTCCCCCCTGCTTTTTAGGTTCGAATTTTGATTCTCTCATTGCTGAAATTAGTGCAGGAACATAACATTTTGATCTTTTTATTTGTCCTTATTTTTATTATAAGTATACCCGATATTGCAACTTCGAAATATATTTTGCATTACTGACTTTGATTTCTGAAAGATGGTCTAACTCCACGAAGTGGGACTGTTACTGGGTTTCTCTCACCATTTTGTTCGAATCAACTAAATGCCACGAAGAAGCAAAGCTTTGTATATGTTAAACTAAAACTGAATAGTCATCGCGGAATTAAATTTAAAATGTGCAGATAACAACTTTGTATTACCACTGGGAGTGTTTGGAAAATGTTAAAAGGAATTGAACCCAATGGAACAAGCAATGTCGTCCACCAGAGGTCTTGGATAGGGAGGTTTTCTCTCTTCCTTTCTCTTCAACAACAGTTGTCCCGTCAGCTTGACCTAAACGAAATCCTGTTCTCCATCTTTTCATTGTATAAGAGCTCCTATCCTCCGTCTTGATCCCCATCCATTCGTAAAGGAAAGGGAGACTCTTTGTTTATAGATTAATAGAACATTCCATTGAAGTCTTGGGCTCAAAAGATTAAAGAAAACCTTAAACAACAAAGGGAGGCCTTTTCATAGTTTTCCTTTTCCTGAATTGTGGCTGGTTTATCACGGTGTATATGTTAGTCCTTTTAATAATAAATGATATTTTGGCCAGTTGGAAGAATTTTTTATGATCACCATTGGTTAGGACGTAGGAGTTTGGGTTTCCTCTTATTTTGCAGTTTTTCATTCTTTCAATGCAGATTGGTTCCCTATAAAAGACGTGGACAATTTTACATTATTGTATACAATATCAAGTCTCAGAGATGATGCATAACTTTCTATAATCAGAAAGAAAAAGATGGAAAAATGTTATTCATTTACTTAATACTTATAAGTTTGTGGCCATACACCTTTAAAAGCCTATGTGATGGTTGAATTAGAGTGCAACGAGAAAAGTGATTGATACTGTGGGAAAACTCAATCTGCAACCTAACAGATTCTAAAATATCTCCAACAAAAGAAAATCCACAGAACTAGAGGGAAGGGCAGCCAACTTTGAAACATCTTTGGAGGCTCTTTCATTTTGTGTTTGCCTTTGTTTTTAGAATGACCTTCAAGTACTTTCATTTTTTCTTAATGAAGGCAATTTTAAAGCCAAAAAAGAAACAACTATTACTATAATTTATTATTGTTTAAATGAAAAAGCATACTTTCTTAGAGAAAATGATGAAAGTATTCATTATCCTGAGAGAATCTGTTTTGTTTATTATTTATTTTTATTAAAATTTTCTTTTATTTTGCTCTAACTTTTTTTTCTGTAAGTTAGAGCAAGCCTAATAAACCCGTCCTTTTGTTTTCCATTAAGAAATGCATTATTTTTCACTATTATTTTCTGTATCCACGTGATTGAACATGTATATAGTGTATGTATCTATTACCGAAGAATGTAGAAGATCCAACACTCTTTTAAGCATCTAACAAGCGTTGTGCCTACTGTGTGTTAACATAGTCAGGTTACTGAAACCTCTATTGAAGTATTCATCCGCAAAATGTTTGAAGGATCCATCTAGTAAAACACACCTGAACTTTTCTTTGTGGATCTAAGAAAACTGGACTATCCTACACAATTGTCTGTTGGAAAATTCCACATTTGATCGGAAGACCTTATTTTGTATTAGTTGTTTGTGTGGGGGAGCCTCTATCCACAGCCTTGGGCCCTCAGGCTGTCTTTTGATCCTTTTTAATGAATATATGCTCTTTTAAAAAAAAAACAAATCTGAAGCTACAATTCTTTACTGTGATCGTGCTGAAGATTAGTTGGGAAATGGTTGGTTAGTTACATTCCCCCATGGCTGGATGAAGGGAAAGAACTTTGGACTGATTGATCCACAATTTGACTCTCAGCATATGTGAATTTATGCCCTTTCCGATTATCTTTCTGTATCTAATGTTGTGTTTTTAATGTTGTTCACCTATTAGAATTGTTTCCTACTAATCCATCCCTCTCCCTCTCTCAATTTAACAGCGATTTTATGGTTTTGCCATATGCTTTGTTGCTGGTGTAACGTGTACATTGATGGTAAGTATCCTTGAAACTAATATTGATCTCACTTTTCTGTTGACCAAGTCTTTCCAAATTCAAACTATTGATTTACACATACTATACCTCACAAGTGCAATGTTGACTTCGTAATATAAGGTGATCTTTTCATTTGTAATGCATCTCTAAGTGTAAGTCCGAGATGGTATCATCTACCTTTTTAATTTGTTGGTATCTGCTAATTTGTTTTATCATTTCAATAGAAACAAATTGAGGTTGTCTTTGTGTAGCTAAGTTTCATGTAGCACAGAATCACAAATAGAGGTTGTGTATTTATTGGACAACTCACTGATCCATGTCTCCCTACCATCATAAAGGTTTTGAAGATTGGTTATTGTTGGATATGAAAAAGTGTGAGCCGAAGAGAGTTACTAAAGGTTCCTCAATTGGCTTAATTCGAAAGGAAGAAATATTAAAAAGGATTTTTGACAGAGAACTTCATATAGTGGTTTAGAAAAACATTTATGGGTTTCATCCACCCTTGGAGAACCTTCAAATTCATGGCTGCTTCTTTCATACATAACATCCAAGCTACAGCAATCACTTTTTTTTAGCACAAGATTTTTGCTTTTCTTTAGACCTATTGCTGAAAGGAAATTTCAGAACAACTTATTGAACTATGATGAGGTTACTCCAATTTAATCTGAACTTCATGCGAACGACATTCCAAAATCTTTTTGAACCTGCTTCCTGTGTTTTAATGGGGAAGAAACCATTGATCACTGATTCACTTGCTGCTTCATTGCCCTTTTGTTCTCAAGGGTTGGTCTTTTATTTTGGTCTCTCCATTTGCCTCCCCTAAAAGGTTGATGATTGGCTGCTTGAGGTCTTGTTAGGGACTCACTTTTCTGTTAGGAATCCCTTCACCTGCACATAGAAATCCCAACAAGGTACACAATTCAGAAATACAGAGCAAGAACCTCTGTATGTTATATATGTATATTCATGGAAAATATCATGATTACAAGTAAGAAATGTAGAACAAGACCGCAAGAAGATAAAGATAACAACCAGCACATTCGAGAGGGCTGGAAATCCTCTCCCCCAAGCCTTAGCTTGCTCACAATTCTCATACCTCTCTCTTGCCCTAGAACCCCTTCATAAACCTCTCGAACCCGTGGTCCCCTCTTCTTTCTAAGAGACTCCACTCCCCAGTAATGACTTGTTCCCCTGAATTTTCCTTATTGTCCCTTCTTTTATAAGTGTGTATAATTGTAGGCATCACAGGTTCTATAGGGCTGTGCCGTTAAAGCTATTTTATGGTAGACATGGAAGGAGCAAAATCTTAGAATCTTTGAAGATGGGAGAAGTTTGAATGGTTCTTTTGTCCATCGTATATAGCACTTGGCTTCTTTGGTGGAGTTCAAGTCACAAAGATTTTTGGTGTACTTATAGCCTTTGCCTTGATTATTATAATTTGGAAGACTTTTTTGTGTTGGCTCTTTCTGCTTTAGGGAGGGGTTCTCTCTACCCCTCGCTCTTTAATTTGTCATCCTTTTGTCAATATGGATATACATATTCTGTTTCATGTTAAAAAAATATTGTTTGAAGAACTGCAGTGGATGAAGATATGTTATGTTCTTATACTGTTAGACAAGATTTTTCTCCGAGTGACCTTTTACTGTTAGACAAAATCTGGGATTGTTTAGCAATCTAACTGCAGATTTATCATGTCATCTGCATGTATACTTTTCTGCATAGAAGGTTTTCAAACTCCGTCCACACAAATATAAATTGCCTTGTATTGATATGCTCGTACAATACAACTCAATCCTTTTTACCTTTTAACATTTGATGTATCTTTGATTATATCAATGAAAAGTTTGTTTCTAGTTAAAAAAAAAATGATCACACAAATGTAGAAGCTAGAAATTCTATTCCTCGTCTAGTTTTCAGGTCAAGGAAAAGTTTCTTTAAGTTGATATATTTAGTACTTGCTTCTTTGAGTTCTAAAGTTTGATATATTCAACACTTTCTCTGGACAGAATTGATTATCTTCTTGTAAGCACTGATTTGCATCTTGTTTATTTGCATGCAACAGTCGATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGGTTTGTGTTTATATGTTGTTCTACGTTCTGATTAATACTTATTAAGTGGCTTTTTTTTTAAGCTTTACTTGGCTTATTGCAGGTATCCTATCTTCCGTTTTAGTGACTAGTCTTTGCTCTTGATCGAAAGTTGTCTCTAATCTTAGAAAATATTGTTCAATATTGCAGTTAGCTAAAATATGCATTAAATCCTATTCATTTGGTTGATATGCTTAGTTGGTCGGTTAGTTTTCACAGCCCATGTTGTTTGGTAATTGGTTGGGTGGGTGGTAAGTGGTAATACGTTTTGGCTGCTGGTTCATGTAATTGGTGAGTATGGTACCCCAGGAACGTTCATGGAACTTTTATGCTCGAACTTTGAAAATCTAGGAGAGGTGAACCAAATTCGGTGGGAGCAATAAGTATAGGAATTAAGGATGAATTGAATGCTGGGAATCACAATTTGAACTAGCTTGGATAAAAGTTGACCAAATCCATACAACAGATATTTTTGTAGGATATCCGTTCATAGGAGATTGGAAAACTCTTTGCCTTGCTATTGACAAAACTTTCTTTTGGGCTATTGGGTGTGAAAAGAATGGGTAGATTAGATTTTCTGTTGGATTTCTGCATATTCTGATATTAGATGTGTATTATTTGTATATTTATAATTTATTTATATAAGATTCTTTCCTCGTTGGTAGATGGTCTTTCTTCTATATAAGAAACCTTGTAATTGCTCACAAATATAGAGAAGAAATATAATAACATTTCCATCCCAAATTTGAGCTGGTATCAGAGTAGGTTGTCTCTAAAACCCTATAAAAGAAGAAAAGAAAAACCCTAGCTGTCGCTGCTAGAATCGTCAGAACCCTAGCCGCCGACTCTAGGTGGCACAATTTACTTCCGGGCAAAATAGTGTGGTCACAAGTGATTCAAGTTCCTTCGTGGGTCAGAGACTGTTGAAGCTTCGTGGGTGCTCCTGTCCAACAAGTTCTCTCTTCTCCAACGAGGTTGTTGGTTGTTTCCGGCAAAGTCTAAGCGCCTCCAACACTGTTGTTTGTTGTCACTGGTCATCTCTGTTCGTGGGTGGCTGGAAACACAGTAGGCGCTTGTGTTTTTTGAAGAGTGAAGGGTTGAAAATCGAGAAACATCCAAACTAGAAGACAAATTGCCAGTTCAGTTTAGTCTGATATTCGGTTTAGTTTTGCTCATTTTAGGTCAAACTACTATTCGGTTGGTTTAGGTTTTTTTTGTTTTATTTGGTCCAGTTCGTAATCTGGTCTGATTTTTAAGATTTGGATCAAATAAATCGGTTTAGTTTGGTTCACTATTTGCTTGGTTCAGGATTGGTTTTTCAGCATTTGGTTCAATTTTCTTTCCTGTGACCTTCTTTCAATGAGAAAGCTTTGTCGAGATTCAAATTGTCATATCACCTTCTTTGAATTGCATTAGGTTTTTCAGCATCACAACTTGGGAAAGAAAACTGGGAGCACTAGGATGCTTGATGGTTTCTACTACTTTAATTCAGATTTTCTAGTAATGAAATAACTGAGGGTCTTAGTAGTATCATTTTTCTTTCTGTTCATAAACAAATCATGCTTTGGTATCGTAGGTTAGGACATCCCAATTTTCTCATAAACATTGTTTCCAAATTTGTTCAAAAATGTCTTTTCATTGTGGTAAATTTGGTTATATAAACACTTCAATCTGTCTTCAATTTTTATTAGTGGCCGTCCTTGTGGAAGAATCTTGGCTTCTCATGGGTTAAGAAGGGGATGCACTTTCTTCATTCTTTTTCTTAATTGTAAGTGAGATTTTTATTGCCTTAATTGAAAAAGTTCATCTTAAAGGGGCTTATGATGGTTTTAAGATTTCTCTTCTTCAATTTCCCGATGATACCTTACATTTTTTGTAAAGATAATGATGATATGTTCACTAATCCAAGCAGTGGAACTTTTTGAATGGTGCTCAGGTTTGAAAATCAATTGGGAGAAGTCGGCTTTGAGTGGTTTAAATATGGATGCTTCTAAGATCAGAATCAATATTTGCTTCACGCCTTAATTGTATGGTAGAAGCTTTGTCAATTCTTTACTTGGGTCTTCCTCTTGTAGGACATCCCAATTCAGAAACTTTCTGGTAGCCGGTGTTAGAAAAAATTCAGAAAAAACTTGATAGATGGAAGCGGTTTTCTTGTCGACGTCTCTAGTAAACTAAAGACATTGTTTAATAGCTATTTTGTTATCTCATGGTGGTTGTCTTACTCTATGCTCCTAAGTGTTATCAATCAAGCATCCCTTTGTACTATTTGTCTTTATTTTTGATGCCTTCTTCAACTAGCATTCAACTCAAGTGGGTGTTGGGTACTTTTTTGGGAAGGAAATGTAGGTAGCAATATTCAACCACTTGGTGAGATGGAGCTTAGTTTCAAAGTCGAAGTTGGACGGAGGAGTTGGTCTTGGTGATTTAAAATCCAGAAGTATGGCTTTGTTAGCTAAATGGGGTTAGCGTTTTGTGAAAGAACCACATGCTTTTTGGAGGAAAGTCATTATCAGCATTCATGGTTATTTGGTTTTTGGTTGGAATTCTGCTTCAAGAACTAATTTGAGCCTTCGAAGCCCTTGGATGAATATCTCAAAGCTTTGGAAGCAATTTGATGCCTTTGCTCATTTCAAATTGGCAATGGCAGCAAAATTTTGTTTTGGGATGATATATGGTTGGGAACTTCTTCTTTGAAATCTTCTTTCCCTCGGCTGGTTGCTGTTTGCTCATCTCCTAATGGGTCTGTTTCAGATCATTGGGATGCTCTAATTGGTGCTTGGCGTATTCCTTTTCGTCAACTCTTAAAGGACGAAGAAATACTCGATTTTCAATATTTTCTTTCCTCAGTTTCAGCCGTTTTTATTGGAAAAAAGGATGATTCTAGACTTTGGTCTTTTGAACCTTCAAGTATTTTATTGGTTAAATCTCTAACCAAGCATTTGGTATCTTCTGCCAATGGATAAAGAGGAGTACTCAACACTTTGGATGTCCAAAAGTCCAAAACGGATCAATATTTTGATGTGGAATAGGATTATGTTGAATAGGAACCTTAATACTTCAGAGGTGTTGCAAAATAAGAATCCCAAGAAGTGCTTAATGCCATCAGTTTGCTATAGCTCTTTTGGGAGGGGCTTCTCTCTACCCCTTGTCCTTAAGTTGTCCTCCTTTTGATGATTTTAATACAAACCTTCTTGTTTCTTAAAAAAGAAAAGATAAAGAAAGAAAAAGAAAGATGTGAGAACACAATTCATAGGGTCTGAAATGTGGTGTGGCGAAAAAGGAGAGGAAAAAAATGGTGACCTTGCAAATGACTTTGAAGATAAAAGTTTTGTGAGAACGAGGAAGGAGAGTCAAAGGAGATGATGAAATTAGCTGGGGTCTTTTAGACTGCTAGTGAAGAGGAAGATACTGACATTATGGCCTTCGAAGCGTCAACGGTGTGAGAGTAGGGTATACAATGATAAAAAGAAGATACTACTGTTTAGATTAACGTTATTTTTGGCAGGCTGTAAATTAAAGCGAACCCTCCGTGGTTTTTTTTCCCCCTTTTTTTGGGGGGGTGGGGGGACCGCTCTTTCATCCAGAAAAGTGAAAGAATATACAAGAACTTAAAGAAAAAAAAGGCCCTGAGAGAAGGAGTTTGACCTTAACTACACATAATGACTCCAATCCAAAAGAACACGAACGTCCTCATAATTACAAAAAGGCCTAGTGGCCGATGCTCATAAGGAGACTTTAAACCTAGCCACGTCCCAAACTTTCTCACCCTATCTCTCTACCTCTCTAAAAATTCTATAATTCCTCTTAATCTAAATCTCCCACAAAATTGCAAGTAAGCTAGCCTGGCAAAAAACTTTGCCTTTCTCCAAGAGAGAACTCTAAAGCGAACCCTCATGTTGGATCTAGGTTTAAGTAGGTTTAGCTATAGCCAACTCTTCTTTACTCGTATATGTTCAAGATTGCAAGCTAGCTCAAAAAAGTGGGCCAAAGTTTGTCGGGCAGGCCATTGGAATTCTACATGTGGGTCATCCAACTCAACCCATTTTTTTGTCCAAACTCGTTCAACAATGACATTTCCTTGAAGGTAAGGTAGTGTCTTCATAGGGGTGGTTCAATAAGGAGCACAACGACGGCAGAATTAAAAAAAAAAAAAAATCTAATGGCAAAGGAGCAAAAGGTATATGGGACCTGTTCAAGATGGGTTGTGAAATTTTTCACAATAGGATATTCTCATTAATTGAATTTTGGGTTTAAATGAAAGATTTAATCTAACAGACTCATAACAAATTTAATAACAGAATGCTAGAACAAAACTTACAACTTGTAACAGATACGCTTATGGCCTCTTTAGAATGACTTTTTGAGTGTTTATAAACACTTTTTTTTTTGCATTTATAAACATTTAGTTAAACACTTGGAAAGTCAATACAAACACACCATTAATATCCTCCTGCAAACAAATGACCAGCTAGGACATGTATGAAATATATCGAAAGTAAGAGGTTTAGTGAACATATCGGTAAGCTGCTGAGAAGTATGAACATATTGAAGCACATCTTTATGAACAACTTTCTCCCAAAAAAAAAAAAAATGAAAATCCACCTCAATGTGCTTCCATTGGGATTACACTTAACTTCGTACACCCATTTACACCCAATTGCTGTCTTTCCACTTGGCAAGGGGGTTAGAACCCAAGTTTCTTGTTTACCAAAGCATTGTATTCCTCTCTCATTGCATCCTGTCAAACTCCAACCTTGGATACTTTGATTTTCTGATTTTTTTTGGCTAGGTTTGATTTATTTATTTTTTGGCTAAGTTTCTTGTTTACCAAAGCATTGTATTCCTCTCTCATTGCATCCTGTCAAACTCCAACCTTGGATACTTTTGATTTTCTGACTTTCTGATTTTTTTTCTTGGCTAAGTTTGATTGTTTTTTTTATTGTTTTTGTGGCAGCACAGCATTTCTCGTAGGCCCCAAAAGGCAAGTGACAATGATGCTTGATCCTGTTCGGATTTATGCGACAGCCATATACCTTGCTAGCATGATATTCGCTCTTTTCTGTGCTCTCTATGTAAGTTGACCTGTCGTTCCCTTGAAATCTTATAGTAATAACACATGACCCATGTATAGGGAATCCTTGTTCCGTTGAGGCGAGTCATTGTTAATATCTCATCCTCCTTTCATATCATTACAATGCAGGTCCACAACAAGCTGTTGACACTTCTTGCGCTCATTTTAGAATTTGGTGCCCTAATTTGGTTAGTCTAAGTAATTTCTTTTCTTATCTTACTATTTTATCTCACTCATTTTAATATCTATCAATTTCTCTTAAAAATCTGGAGCAGATGTCGTGCATGCGGTGCATGTTTATTTAAATTTATTCAACTGAAACTGATTGTCAGATTATTTTTTACTCCTTATTTACTGGGTTTTTTCTGTTTAATGAGAATGCACATTCCTTTGAAGGAAATATTTAAACACATGAACTAAAATGAAGCCTTCACTACTAGTGCATGTTGTGGAAACATCAGTTAAATTTGGTTCTGCCACTGTCAAGCTTTCCTCTGTAGGAATCACTTCTAACTCACCATAAGAACCTCTTCACTGGGGGTTTAATGCTAAGTTCGGGTTATTTAAAAAAAAAAATAGCAAATATGTGAGGTATTTTGAAACTTTTTGCAAAAATAGAATTGTTTTGTTGTCTTGTTGAGTTGCATCCCTAGTAAAGACGCATTTTTTTTTTTTTACAAGAGAGCTTGCCAATACCTCTTCTTCCCCATGGTGATCTTCTCCTTCGCTGCCCTTTTTTATGTTTTTTTTTTCTAATCTCCTCCTTCAGACTCTCATATTATCATTATTTTTTTTATCTCCTTCTGCCTCTTCTTTCTTTTTTGTTGCTTTATTTGTTTATTTATGATTATGTCTAATCTCCTTCTTCTTCTTCTATTTTTTTTTTTTTTTGGTTACATACATACAATCTCAAGTTGTTAGCTAAATCATTAAGTTAGAGAGCAACAAATGGGGAAAAAATAGAAAAGAACAAAAATCAAAACACCAAGAAGGCAAATAAAGAAATTAGCAAAAAGATCAGAACGCAATTCTTACGACCTTACTTGAACATGATCTGTTGTAGAGGTTAATTCTAAAGCTCAGAACGCAATCCTTGGAAAATAGAATAAGAAAGGAAAAAAAACAAAGGGTTGCGTCTTTACAAAAGACTTAGACTCAATTTCTTTAATGTTGCATTTTTGCAAGATACACAACTCAATAAGAACAAATATATATATATATATATATATATATATATATATTTTTTTTTTTGCTAATAGTTTTTAAATATCCCACACATTTGCTAATTGTTTTTTTAACAACTCCAACCTTCACTGGGTTTGGGTTCTTGTTCTTGTTGATTGATTATTTATATCAAATGAAATGTCTTGAGCTAATTTCTTGTGATCAAGTCCACTCTGTTGGTTCAAAGAAACAATAGAATGTGGTGGCTTGCGATTGCAATAGCTACGAATTTTCAGTTGATATTGTTGTCAAGAATCAAAACTAAAATGCTGTTGCTACAAGCCTACAATACAAGATCTGTTCTGTATGTTCACGGAGCTCTCCCACTTTCAAACATGAAAGATAGAAGAGCCGATTTACATCAGAGAAAAAAAGGATAGATAGGAGAATATGGTATAAGAATGGTGCTTTACTGATTCACGTTTTCCTATTTTTTCATTGGTAGGTATAGCTTGAGCTACATACCGTTTGCGAGGTCGATGGTTTCAAAGGTTATGGTAGGTTGTTTGGATACTGAGTTTTAG

mRNA sequence

ATGTCGCCGGAAACGGAATCCAGTGCCGGAAAAGTGGAGTTGAAGAAGAAAGATGAGCGTCGATGGCGAGTGCGACTGCAGAAATGGAGCAAAGAAAAGCGAAGCGACGGCGGCGGCTTTGTCATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGAAGAACGTCAAGCTTCTACTGCTACCATTGATGACGGCGACTCTTCCTGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCCACAAAACAGTCGATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGCACAGCATTTCTCGTAGGCCCCAAAAGGCAAGTGACAATGATGCTTGATCCTGTTCGGATTTATGCGACAGCCATATACCTTGCTAGCATGATATTCGCTCTTTTCTGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTGCGCTCATTTTAGAATTTGGTGCCCTAATTTGGTATAGCTTGAGCTACATACCGTTTGCGAGGTCGATGGTTTCAAAGGTTATGGTAGGTTGTTTGGATACTGAGTTTTAG

Coding sequence (CDS)

ATGTCGCCGGAAACGGAATCCAGTGCCGGAAAAGTGGAGTTGAAGAAGAAAGATGAGCGTCGATGGCGAGTGCGACTGCAGAAATGGAGCAAAGAAAAGCGAAGCGACGGCGGCGGCTTTGTCATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGAAGAACGTCAAGCTTCTACTGCTACCATTGATGACGGCGACTCTTCCTGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCCACAAAACAGTCGATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGCACAGCATTTCTCGTAGGCCCCAAAAGGCAAGTGACAATGATGCTTGATCCTGTTCGGATTTATGCGACAGCCATATACCTTGCTAGCATGATATTCGCTCTTTTCTGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTGCGCTCATTTTAGAATTTGGTGCCCTAATTTGGTATAGCTTGAGCTACATACCGTTTGCGAGGTCGATGGTTTCAAAGGTTATGGTAGGTTGTTTGGATACTGAGTTTTAG

Protein sequence

MSPETESSAGKVELKKKDERRWRVRLQKWSKEKRSDGGGFVMEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF

Homology

[Close]

BLAST of HG10000848 vs. NCBI nr
Match: XP_008460845.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis melo] >XP_008460846.1 PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 158/179 (88.27%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           MEKMNQAFEKMKMLVGVEVD+ERQASTATIDDG SSWFMDDFNRNCTLSTKQ        
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDERQASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMV CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVACLDTEF 179

[Close]

BLAST of HG10000848 vs. NCBI nr
Match: XP_038900581.1 (vesicle transport protein SFT2B [Benincasa hispida] >XP_038900582.1 vesicle transport protein SFT2B [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 5.3e-75
Identity = 155/179 (86.59%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           MEKMNQAFEKMKMLVGVEVD+ERQASTATIDDG+SSWFMDDFNRNCTLSTKQ        
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDERQASTATIDDGNSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLASMIFALFCALYVHNK+LTLLALILEFGALIWYSLSY+PFARSMVSKVMV CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKVLTLLALILEFGALIWYSLSYVPFARSMVSKVMVACLDTEF 179

[Close]

BLAST of HG10000848 vs. NCBI nr
Match: XP_022973824.1 (vesicle transport protein SFT2B isoform X2 [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 3.4e-74
Identity = 152/161 (94.41%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNP 101
           MEKMNQAFEKMKMLVGVEVD+E  ASTATI+D +SSWFMDDFNRNCTLSTKQSMLVFFNP
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQSMLVFFNP 60

Query: 102 IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 161
           IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK
Sbjct: 61  IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 120

Query: 162 LLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           LLTLLALILEFGALIWYSLSYIPFAR+MVS+VMV CLDTEF
Sbjct: 121 LLTLLALILEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 159

[Close]

BLAST of HG10000848 vs. NCBI nr
Match: XP_022932027.1 (vesicle transport protein SFT2B isoform X2 [Cucurbita moschata])

HSP 1 Score: 288.5 bits (737), Expect = 4.5e-74
Identity = 151/161 (93.79%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNP 101
           MEKMNQAFEKMKMLVGVEVD+E  ASTATI+D +SSWFMDDFNRNCTLSTKQSMLVFFNP
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQSMLVFFNP 60

Query: 102 IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 161
           IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK
Sbjct: 61  IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 120

Query: 162 LLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           LLTLLAL+LEFGALIWYSLSYIPFAR+MVS+VMV CLDTEF
Sbjct: 121 LLTLLALVLEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 159

[Close]

BLAST of HG10000848 vs. NCBI nr
Match: XP_023512398.1 (vesicle transport protein SFT2B isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 150/161 (93.17%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNP 101
           MEKMNQAFEKMKMLVGVEVD+E  ASTATI+D +SSWFMDDFNRNCTLSTKQSMLVFFNP
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQSMLVFFNP 60

Query: 102 IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 161
           IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK
Sbjct: 61  IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 120

Query: 162 LLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           LLTLLALILEFGAL+WYSLSYIPFAR+MVS+V+V CLDTEF
Sbjct: 121 LLTLLALILEFGALVWYSLSYIPFARTMVSRVIVACLDTEF 159

[Close]

BLAST of HG10000848 vs. ExPASy Swiss-Prot
Match: Q5U3Y5 (Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.4e-15
Identity = 58/152 (38.16%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 50  EKMKMLVGVEVDEERQASTATIDDGDS-------SWFMDDFNRNCTLSTKQSMLVFF-NP 109
           EK++ ++  + D+E Q  TA + D  S        WF+  F      S   + L++  N 
Sbjct: 2   EKLRRVLSGQ-DDEEQGLTAQVLDASSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPNG 61

Query: 110 IK-FGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHN 169
           +K F + +TLGN+ +L ST FL+GP +Q+  M +  R+ AT I L  ++F L  AL+   
Sbjct: 62  VKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRK 121

Query: 170 KLLTLLALILEFGALIWYSLSYIPFARSMVSK 193
           K L LL  IL+F ++ WYSLSYIP+AR  V K
Sbjct: 122 KGLALLFCILQFLSMTWYSLSYIPYARDAVLK 152

[Close]

BLAST of HG10000848 vs. ExPASy Swiss-Prot
Match: Q8VD57 (Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-15
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 50  EKMKMLVGVEVDEERQASTATIDDGDSSW------FMDDFNRNCTLSTKQSMLVFFNPIK 109
           +K+K ++  +  E+R   +  ++    SW      F+  F      S   ++L++  P K
Sbjct: 2   DKLKKVLSGQDTEDRSGLSEVVEASSLSWGTRIKGFIACFALGILCSVLGTLLLWV-PRK 61

Query: 110 ----FGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFAL-FCALYV 169
               F + +TLGN++S+GST FL+GP +Q+  M +P R+ AT + L  + FAL  C+ ++
Sbjct: 62  GLGLFAVFYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVL--LCFALTLCSAFL 121

Query: 170 HNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCL 199
            NK L L+  IL+  AL WYSLSYIP+AR  V K    CL
Sbjct: 122 WNKGLALIFCILQSLALTWYSLSYIPYARDAVKKCFAVCL 158

[Close]

BLAST of HG10000848 vs. ExPASy Swiss-Prot
Match: Q4FZV2 (Vesicle transport protein SFT2B OS=Rattus norvegicus OX=10116 GN=Sft2d2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-15
Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 0


Query: 50  EKMKMLVGVEVDEERQASTATIDDGDSSW------FMDDFNRNCTLSTKQSMLVFFN-PI 109
           +K+K ++  +  E+R   +  ++    SW      F+  F      S   ++L++ +   
Sbjct: 2   DKLKKVLSGQDTEDRSGLSEVVESSSLSWSTRIKGFIVCFALGILCSLLGTLLLWVSRKG 61

Query: 110 KFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKL 169
            F + +TLGN+ S+GST FL+GP +Q+  M +P R+ AT + L   +  L C+ ++ NK 
Sbjct: 62  LFAVFYTLGNITSIGSTMFLMGPLKQLKRMFEPTRLIATILVLLFFVLTL-CSAFLWNKG 121

Query: 170 LTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCL 199
           L L+  IL+  AL WYSLSYIP+AR  V K    CL
Sbjct: 122 LALIFCILQSLALTWYSLSYIPYARDAVKKCFAVCL 156

[Close]

BLAST of HG10000848 vs. ExPASy Swiss-Prot
Match: Q5SSN7 (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 58/152 (38.16%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 50  EKMKMLVGVEVDEERQASTATIDDGDS-------SWFMDDFNRNCTLSTKQSMLVFF-NP 109
           EK++ ++  + D+E Q  TA + D  S        WF+  F      S   + L++  N 
Sbjct: 2   EKLRRVLSGQ-DDEEQGLTAQVLDASSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNG 61

Query: 110 IK-FGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHN 169
           +K F + +TLGN+ +L ST FL+GP +Q+  M +  R+ AT I L  ++F L  AL+   
Sbjct: 62  MKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRK 121

Query: 170 KLLTLLALILEFGALIWYSLSYIPFARSMVSK 193
           K L LL  IL+F ++ WYSLSYIP+AR  V K
Sbjct: 122 KGLALLFCILQFLSMTWYSLSYIPYARDAVLK 152

[Close]

BLAST of HG10000848 vs. ExPASy Swiss-Prot
Match: O95562 (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 50  EKMKMLVGVEVDEERQASTATIDDGDSSW------FMDDFNRNCTLSTKQSMLVFFNPIK 109
           +K+K ++  +  E+R   +  ++    SW      F+  F      S   ++L++  P K
Sbjct: 2   DKLKKVLSGQDTEDRSGLSEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWV-PRK 61

Query: 110 ----FGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVH 169
               F + +T GN+ S+GST FL+GP +Q+  M +P R+ AT + L      L  A + H
Sbjct: 62  GLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWH 121

Query: 170 NKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCL 199
           NK L L+  IL+  AL WYSLS+IPFAR  V K    CL
Sbjct: 122 NKGLALIFCILQSLALTWYSLSFIPFARDAVKKCFAVCL 159

[Close]

BLAST of HG10000848 vs. ExPASy TrEMBL
Match: A0A1S3CDD0 (Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103499598 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.8e-76
Identity = 158/179 (88.27%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           MEKMNQAFEKMKMLVGVEVD+ERQASTATIDDG SSWFMDDFNRNCTLSTKQ        
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDERQASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMV CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVACLDTEF 179

[Close]

BLAST of HG10000848 vs. ExPASy TrEMBL
Match: A0A6J1IFS2 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111472372 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 152/161 (94.41%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNP 101
           MEKMNQAFEKMKMLVGVEVD+E  ASTATI+D +SSWFMDDFNRNCTLSTKQSMLVFFNP
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQSMLVFFNP 60

Query: 102 IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 161
           IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK
Sbjct: 61  IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 120

Query: 162 LLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           LLTLLALILEFGALIWYSLSYIPFAR+MVS+VMV CLDTEF
Sbjct: 121 LLTLLALILEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 159

[Close]

BLAST of HG10000848 vs. ExPASy TrEMBL
Match: A0A6J1EVH7 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111438354 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 151/161 (93.79%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQSMLVFFNP 101
           MEKMNQAFEKMKMLVGVEVD+E  ASTATI+D +SSWFMDDFNRNCTLSTKQSMLVFFNP
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQSMLVFFNP 60

Query: 102 IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 161
           IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK
Sbjct: 61  IKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNK 120

Query: 162 LLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           LLTLLAL+LEFGALIWYSLSYIPFAR+MVS+VMV CLDTEF
Sbjct: 121 LLTLLALVLEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 159

[Close]

BLAST of HG10000848 vs. ExPASy TrEMBL
Match: A0A0A0LMG7 (Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_2G336760 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           MEKMNQAFEKMKMLVGVEVD+ER+ASTATIDDG SSWFMDDFNRNCTLSTKQ        
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLASMIFALF ALYVHNKLLTLL+LILEFGALIWYSLSYIPFARSMVSKVMV CLDTEF
Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 179

[Close]

BLAST of HG10000848 vs. ExPASy TrEMBL
Match: A0A6J1E0X7 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111024936 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.5e-72
Identity = 150/179 (83.80%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           M+KMNQAFEKMKMLVGVE DEE QA+TAT+DDG SSWFMDDFNRNCTLSTKQ        
Sbjct: 1   MDKMNQAFEKMKMLVGVEADEEHQATTATMDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFF PIKFGIAFTLGN+LSLGSTAFLVGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FTAGLTCTLMSMLVFFKPIKFGIAFTLGNLLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLASMIFALFCALYVHNKLLTLLALILEFG LIWYSLSYIPFAR+MVSKVMV CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGGLIWYSLSYIPFARTMVSKVMVACLDTEF 179

[Close]

BLAST of HG10000848 vs. TAIR 10
Match: AT5G23550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 223.4 bits (568), Expect = 1.6e-58
Identity = 120/179 (67.04%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 42  MEKMNQAFEKMKMLVGVEVDEERQASTATIDDGDSSWFMDDFNRNCTLSTKQ-------- 101
           M+KMNQA EKMKMLVG+EV++E+QA+    D+  S  FM+D NRNC L+TKQ        
Sbjct: 1   MDKMNQAIEKMKMLVGMEVEDEQQAA----DEESSLSFMEDLNRNCALTTKQRFYGFAIC 60

Query: 102 ----------SMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 161
                     SMLVFFNP+KFGI FTLGN+++LGSTAFL+GP+RQVTMMLDP RIYATA+
Sbjct: 61  LSAGLTCTLLSMLVFFNPVKFGITFTLGNLMALGSTAFLIGPQRQVTMMLDPARIYATAL 120

Query: 162 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVGCLDTEF 203
           YLAS+I ALFCALYV NKLLTLLA+ILEF  LIWYSLSYIPFAR+MVSK+ + C DTEF
Sbjct: 121 YLASIIIALFCALYVRNKLLTLLAIILEFTGLIWYSLSYIPFARTMVSKIFMTCFDTEF 175

[Close]

BLAST of HG10000848 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 73  DGDSSWFMDDFNRN-CTLSTKQ------------------SMLVFFNPIKFGIAFTLGNM 132
           DG +  F++D +   C LST Q                  SM+VF  PIKF + FT GN+
Sbjct: 15  DGTTDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNV 74

Query: 133 LSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHNKLLTLLALILEFG 192
           L++GSTAFL+GP++Q++MM DPVR  AT+IY+  ++ AL CAL +H+K+LT+LA++ E  
Sbjct: 75  LAIGSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEIC 134

Query: 193 ALIWYSLSYIPFARSMVSKVMVGCLDTE 202
           ALIWYSLSYIPFAR MVS++M+   DTE
Sbjct: 135 ALIWYSLSYIPFARRMVSEIMIRLCDTE 162

[Close]

BLAST of HG10000848 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07
Identity = 30/84 (35.71%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 101 PIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAIYLASMIFALFCALYVHN 160
           P KF I FTLG    +GS   L GPK Q+  M    R+ +T  ++A+M+  ++ ++ +H+
Sbjct: 119 PQKFAICFTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHS 178

Query: 161 KLLTLLALILEFGALIWYSLSYIP 185
            +L++L  +L+  AL++Y +SY P
Sbjct: 179 YILSVLFSVLQVLALVYYCISYFP 202

The following BLAST results are available for this feature:

BLAST of HG10000848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460845.1	1.8e-75	88.27	PREDICTED: vesicle transport protein SFT2B [Cucumis melo] >XP_008460846.1 PREDIC...	[more]
XP_038900581.1	5.3e-75	86.59	vesicle transport protein SFT2B [Benincasa hispida] >XP_038900582.1 vesicle tran...	[more]
XP_022973824.1	3.4e-74	94.41	vesicle transport protein SFT2B isoform X2 [Cucurbita maxima]	[more]
XP_022932027.1	4.5e-74	93.79	vesicle transport protein SFT2B isoform X2 [Cucurbita moschata]	[more]
XP_023512398.1	1.3e-73	93.17	vesicle transport protein SFT2B isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10000848 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5U3Y5	6.4e-15	38.16	Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=...	[more]
Q8VD57	8.3e-15	36.25	Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1	[more]
Q4FZV2	8.3e-15	34.62	Vesicle transport protein SFT2B OS=Rattus norvegicus OX=10116 GN=Sft2d2 PE=2 SV=...	[more]
Q5SSN7	1.4e-14	38.16	Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1	[more]
O95562	2.4e-14	35.22	Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1	[more]

BLAST of HG10000848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDD0	8.8e-76	88.27	Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103499598 PE=3 SV=1	[more]
A0A6J1IFS2	1.7e-74	94.41	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111472372 PE=3 SV=1	[more]
A0A6J1EVH7	2.2e-74	93.79	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111438354 PE=3 SV=...	[more]
A0A0A0LMG7	1.4e-73	86.03	Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_2G336760 PE=3 SV=1	[more]
A0A6J1E0X7	3.5e-72	83.80	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111024936 PE=3 SV...	[more]

BLAST of HG10000848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23550.1	1.6e-58	67.04	Got1/Sft2-like vescicle transport protein family	[more]
AT5G24170.1	4.5e-32	50.00	Got1/Sft2-like vescicle transport protein family	[more]
AT4G26550.1	5.0e-07	35.71	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 93..194 e-value: 9.2E-33 score: 113.0
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 94..202 coord: 44..93
None	No IPR available	PANTHER	PTHR23137:SF33	VESICLE TRANSPORT PROTEIN	coord: 94..202 coord: 44..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000848.1	HG10000848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane