HG10000670 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000670
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	caltractin-like
Location	Chr09: 7902758 .. 7906004 (+)
RNA-Seq Expression	HG10000670
Synteny	HG10000670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTTGTTCGAAATCCAGTCATAAACTTCTTTTCTATGTTTTCCTTTTGAAGAGTTTTTCAATTTGTTGTTCGATCTTTGTCCTAATTTTGCATTTGATTCGATCTCTGCGACCATGAGGTCATGTTTTGGGTTATTATAATCTTCGTAATATGTTGCATTTCAGCTAGATTAGGTCAATTGTGTGAGTTTTTGATACTTAGAACTTGGGTAGAAGCCTTTGATTTCTGTATGAAATGAGAATATGCAATAAATAGCTAGAAATTGGACTGCTTCTTTTGCCAACTTCTTTTTTTTTCAGGTGAAAATTGGGTTTTGATTATTATGACTTGTTTTCCTTTTGGTTGGAATTTGCAATCTTCTTTTTAGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGTGCGCAAATTATTTCTTGTTTTATGCTTGTTACTGGTTTTTTATGTGTTTGAATGGGGTACTCAGTTGTTAGTCTGTATTACTTTTGGTTAGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGTATGAATATCTCATCATGGATATGAAAACGACAGCTAAAAGATTGTAAATTTAAACTTTTATAACTGATTTATTCTTGTGGCAGGGCTCTTGGTTTTGAGATGACCGACGAGGTAACTCTATGCCCCTAGGATGCATTATGCATTTACCATTTCGATGGACAATCATGTGACATTCTAGCATGCATGATACCATTAGATAAGTTTGTCAGAAAACATCAGTTTATTTATCTTGTGGCATCCACGTTGTTTCTTAACGTTTTAGGCTAATTTTTCATTGTTACAATGTGATCAACGTAGCAAATTCCTATTCTCCCATTATTGATTATGCAAATAGTGAGGCCGTAAGGGTGTGCTATCTCCTTCAGAGTGAATTGTCTGTTTATTGTGGAGCGAGAGCCTTGACTTTCTTATTTTCTACTCTGCACCTTCAAAAGGCAGATTTTTCTTTTATGCAGAAGGCTATTATTAGGAAATTATTTTGCTGGACTGAGTGATTGTAGCGAGTTTTAAGTTTCCCTTGCATGCTTTTTCAGAGTTCTGTTTGCCTTTTAGTTTAGGTATCCTTCACATAATGTCAGTAGTTAGAAGATAAGCTATACAAATCAACAATCAAATTACTTTGGATCCGACTTTAAGATTTTCGCATGTGATAATTATATTGCTGATTGACATAAGATTGATCTCTTGTCGCTCATTCCAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGTAAGGTCTTGATCTTTAGTATTTTAGATGATGGGGATCCAGATGGCTATGTTTTCTAAAATAACTGACCGAGAAATTTATTTATTTTTTGTTTTAATACAAATGCTGTTACCAAGAACAAAAATAGTTGTATGAAATATATTTATGGAATTTATCAAGACTCAATTTCACATTTAAAGTTTTCTTACAGAACTTTGAAGAAGCTAATTTGCTAAACATTCTGTTATTATTGATTGAATTGGCGTTGCATATTCATATTCTTTTTCCTGAATTCAGGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCGTGAGTCACCTTTACTCTATTTTTGAAGCAGGTTTTCTTTTGTGGGGTTACTTTCATGTTTTATCCTTTTCTTGTCTGCCCCATACAACTTTGTTTCTTCATGGTATATAGATGGTATGGGGGCAGGTTAGATAACGTAACTTGTATATGTATGTCACGAAAGGGCACACACCCCAACAAGCTATAAGAAACAACCCTTCTCACAAAATGGTGGATGGAGGAGGAACTCCCCGACCATATCTTAAGCATCCCCATGCGGAGCTAGCAAGAAGCCAAATTTCTGAAAGAGATGATTCCACATGGATCTCACAAACTCACATCTCCAAAGAATGTGATTCAAGTCTTCTCAGCCTTTTGACAAAAATTACAATAAAACAGACCAACTAACGAGAGCATCTTTCTCACAAGTCAATCCAGAGTGTTAGGTCTTCCATGTAAAACTTGCCAAGTAAAGAACTTACCTTAGAATCTTATTTCTCCAAAGAGCATAAAAAACCAACTCAAGTGAGGGAGAATGGTCTATCAAACTACGAAGAACGGAATTGCATGAGAATCTCTCCAAAGGGTTGGGACTCCACACACGAATGTCCCTTCTCCCATGTCTAAAAACAAACGCCTCATGCATGGAAAATAGAGAGACAACCTCCATCGCTTCCCTATTAGATGAAGAGCGACCTCTCAATGAATACTTAAATCCCAATTTCGAAGCCTCCAAGGAAACCGACCTCTCAATGACTTGTGATACTTCCAAGAGGGAGACTAAGGTAAGAAGAGGGAAAGAAACCAACTTCACATCCCACTATGTCCACCCGCCTCCTAAGCTTCTCATTACAATTGATCCCCATAACTTGACATTTACTCCCGTTAATCTTGAACTCAGGCATATGTGAGACCTATTCTTCATATGTATGAAAGGAGGGGCAGGAAAGGGAATTCACCGAAGGCAGTTGGTTAGTGGGACTCCCAAAAGTGGTAGGATACGGTTTGGTGATCTTGGAAGAGTTTGTGTAGGGTTTTGGGGGAAGGAGATCAATGTGATCACTTTGAGTGGAATTAGTCCTTGAGACTTTTAGGAGAGGCACCAAGACCTCTCGAATGAGCCGGATTATATCGTTTCCTTTCCTTGTTTGTCACTCATTTGAAGACTGACTTGTGTTGTGAGGATTCTCTTTGTGGTTTTTCTAAATACATTGCAACAGGGATCGTTATTCCCCTGGTCTGTTGTTCTCGCTGGAGTCTTCCTTGTTTGTCTTTCATTTGACATTTGTAAATATGTAGCTGGTTATATATGGAAGAAAAACAGTTAAATTGGATTTTGTAATTGCAGATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAG

mRNA sequence

ATGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGGCTCTTGGTTTTGAGATGACCGACGAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAG

Coding sequence (CDS)

ATGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGGCTCTTGGTTTTGAGATGACCGACGAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAG

Protein sequence

MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF

Homology

[Close]

BLAST of HG10000670 vs. NCBI nr
Match: XP_022928039.1 (probable calcium-binding protein CML20 [Cucurbita moschata] >XP_022971671.1 probable calcium-binding protein CML20 [Cucurbita maxima] >XP_023513001.1 probable calcium-binding protein CML20 [Cucurbita pepo subsp. pepo] >KAG6571430.1 putative calcium-binding protein CML20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVD+FFRMMRRTTYGF
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDEFFRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. NCBI nr
Match: KAG7011195.1 (putative calcium-binding protein CML20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.5 bits (846), Expect = 8.5e-87
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 2   ASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTD 61
           ASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT+
Sbjct: 1   ASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE 60

Query: 62  EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDI 121
           EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDI
Sbjct: 61  EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDI 120

Query: 122 KRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           KRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVD+FFRMMRRTTYGF
Sbjct: 121 KRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDEFFRMMRRTTYGF 167

[Close]

BLAST of HG10000670 vs. NCBI nr
Match: XP_038902915.1 (probable calcium-binding protein CML20 [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 4.2e-86
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL+KAF IIDHDNNGKISGND
Sbjct: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELLKAFRIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVN+D+FFRMMRRTTYGF
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNIDEFFRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. NCBI nr
Match: XP_023007103.1 (probable calcium-binding protein CML20 [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 5.7e-83
Identity = 158/168 (94.05%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGL PQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLNPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGE FTDKDIQ+MI+EADRD DGEVN D+F RMMRRTTYGF
Sbjct: 121 IKRIAKELGEAFTDKDIQDMIEEADRDRDGEVNADEFVRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. NCBI nr
Match: XP_008457834.1 (PREDICTED: probable calcium-binding protein CML20 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 9.7e-83
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

[Close]

BLAST of HG10000670 vs. ExPASy Swiss-Prot
Match: O82659 (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana OX=3702 GN=CML20 PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-70
Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           M+S+YR  SRKEKP+  HGLT QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MSSIYRTVSRKEKPRRHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI +MIADVDKDGSGAID+DEF +MMTAKIGERDTKEEL KAF IID D NGKIS +D
Sbjct: 61  EEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDD 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKR+AK+LGE FTD +I+EM++EADRD DGEVN+D+F RMMRRT YG
Sbjct: 121 IKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAYG 167

[Close]

BLAST of HG10000670 vs. ExPASy Swiss-Prot
Match: P41210 (Caltractin OS=Atriplex nummularia OX=3553 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68
Identity = 133/160 (83.12%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 10  RKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMI 69
           RK+KP+GR HGLT QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT+EQI QMI
Sbjct: 8   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 67

Query: 70  ADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKEL 129
           ADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS  DI+RIAKEL
Sbjct: 68  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQRIAKEL 127

Query: 130 GEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           GE FT KDIQ+MI+EADRD DGEVNV++F RMM+RT+Y +
Sbjct: 128 GENFTVKDIQDMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167

[Close]

BLAST of HG10000670 vs. ExPASy Swiss-Prot
Match: Q7F0J0 (Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica OX=39947 GN=CML13 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-64
Identity = 125/168 (74.40%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 3   SLYRGASRKEKPKGR--HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 62
           S  +G +R+E+P+G   HGLT QK+QEIKEAF+LFDTD SGTIDAKELNVAMRALGFEMT
Sbjct: 2   STVKGQTRRERPRGARPHGLTKQKRQEIKEAFDLFDTDNSGTIDAKELNVAMRALGFEMT 61

Query: 63  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 122
           +EQI QMIADVDKDGSG+IDY+EFE+MMTAKIGERD+KEEL KAF IID D NGKIS  D
Sbjct: 62  EEQINQMIADVDKDGSGSIDYEEFEHMMTAKIGERDSKEELTKAFSIIDQDKNGKISDVD 121

Query: 123 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           I+RIAKELGE FT ++IQEM+ EADR+ DGE++ D+F RMMRRT YG+
Sbjct: 122 IQRIAKELGENFTYQEIQEMVQEADRNGDGEIDFDEFIRMMRRTGYGY 169

[Close]

BLAST of HG10000670 vs. ExPASy Swiss-Prot
Match: O23184 (Calcium-binding protein CML19 OS=Arabidopsis thaliana OX=3702 GN=CML19 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 2   ASLYRGASRKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 61
           A L RG     KPKG+ +GLT QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 5   AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 64

Query: 62  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 121
           ++QI +++A+VDK+ SGAID+DEF +MMT K GERD+ +EL KAF IIDHDNNGKIS  D
Sbjct: 65  NQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRD 124

Query: 122 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IK IAKELGE FTD DI+EMI+EADRD DGEVN+++F +MM+RT+YG
Sbjct: 125 IKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSYG 167

[Close]

BLAST of HG10000670 vs. ExPASy Swiss-Prot
Match: Q06827 (Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.4e-54
Identity = 105/159 (66.04%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 8   ASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQ 67
           ++R++K K R  GLT ++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE   E+I++
Sbjct: 8   SARRDKAKTRSAGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKK 67

Query: 68  MIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAK 127
           MIAD+DKDGSG ID++EF  MMTAK+GERD++EE+MKAF + D D  GKIS  ++KR+AK
Sbjct: 68  MIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAK 127

Query: 128 ELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTT 166
           ELGE  TD+++QEMIDEADRD DGEVN ++FFR+M++T+
Sbjct: 128 ELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKKTS 166

[Close]

BLAST of HG10000670 vs. ExPASy TrEMBL
Match: A0A6J1I3X1 (probable calcium-binding protein CML20 OS=Cucurbita maxima OX=3661 GN=LOC111470347 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.3e-88
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVD+FFRMMRRTTYGF
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDEFFRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. ExPASy TrEMBL
Match: A0A6J1EJP7 (probable calcium-binding protein CML20 OS=Cucurbita moschata OX=3662 GN=LOC111434942 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.3e-88
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVD+FFRMMRRTTYGF
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDEFFRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. ExPASy TrEMBL
Match: A0A6J1L6S9 (probable calcium-binding protein CML20 OS=Cucurbita maxima OX=3661 GN=LOC111499703 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 158/168 (94.05%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGL PQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLNPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           IKRIAKELGE FTDKDIQ+MI+EADRD DGEVN D+F RMMRRTTYGF
Sbjct: 121 IKRIAKELGEAFTDKDIQDMIEEADRDRDGEVNADEFVRMMRRTTYGF 168

[Close]

BLAST of HG10000670 vs. ExPASy TrEMBL
Match: A0A1S3C6K4 (probable calcium-binding protein CML20 OS=Cucumis melo OX=3656 GN=LOC103497421 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

[Close]

BLAST of HG10000670 vs. ExPASy TrEMBL
Match: A0A0A0LPZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G286440 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI+QMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIKQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

[Close]

BLAST of HG10000670 vs. TAIR 10
Match: AT3G50360.1 (centrin2 )

HSP 1 Score: 267.3 bits (682), Expect = 8.3e-72
Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           M+S+YR  SRKEKP+  HGLT QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MSSIYRTVSRKEKPRRHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI +MIADVDKDGSGAID+DEF +MMTAKIGERDTKEEL KAF IID D NGKIS +D
Sbjct: 61  EEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDD 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKR+AK+LGE FTD +I+EM++EADRD DGEVN+D+F RMMRRT YG
Sbjct: 121 IKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAYG 167

[Close]

BLAST of HG10000670 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 )

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 2   ASLYRGASRKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 61
           A L RG     KPKG+ +GLT QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 5   AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 64

Query: 62  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 121
           ++QI +++A+VDK+ SGAID+DEF +MMT K GERD+ +EL KAF IIDHDNNGKIS  D
Sbjct: 65  NQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRD 124

Query: 122 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IK IAKELGE FTD DI+EMI+EADRD DGEVN+++F +MM+RT+YG
Sbjct: 125 IKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSYG 167

[Close]

BLAST of HG10000670 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 )

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 2   ASLYRGASRKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 61
           A L RG     KPKG+ +GLT QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 9   AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 68

Query: 62  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 121
           ++QI +++A+VDK+ SGAID+DEF +MMT K GERD+ +EL KAF IIDHDNNGKIS  D
Sbjct: 69  NQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRD 128

Query: 122 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IK IAKELGE FTD DI+EMI+EADRD DGEVN+++F +MM+RT+YG
Sbjct: 129 IKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSYG 171

[Close]

BLAST of HG10000670 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 64/142 (45.07%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 20  LTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAI 79
           LT ++  E KEAF LFD DG G I  KEL   MR+LG   T+ +++ MI +VD DG+G I
Sbjct: 5   LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 80  DYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQE 139
           D+ EF  +M  K+ + D++EEL +AF + D D NG IS  +++ +   LGE  TD++++E
Sbjct: 65  DFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 124

Query: 140 MIDEADRDHDGEVNVDDFFRMM 162
           MI EAD D DG++N ++F ++M
Sbjct: 125 MIREADVDGDGQINYEEFVKIM 146

[Close]

BLAST of HG10000670 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 64/142 (45.07%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 20  LTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAI 79
           LT ++  E KEAF LFD DG G I  KEL   MR+LG   T+ +++ MI +VD DG+G I
Sbjct: 5   LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 80  DYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQE 139
           D+ EF  +M  K+ + D++EEL +AF + D D NG IS  +++ +   LGE  TD++++E
Sbjct: 65  DFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 124

Query: 140 MIDEADRDHDGEVNVDDFFRMM 162
           MI EAD D DG++N ++F ++M
Sbjct: 125 MIREADVDGDGQINYEEFVKIM 146

The following BLAST results are available for this feature:

BLAST of HG10000670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928039.1	1.7e-87	98.81	probable calcium-binding protein CML20 [Cucurbita moschata] >XP_022971671.1 prob...	[more]
KAG7011195.1	8.5e-87	98.80	putative calcium-binding protein CML20, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_038902915.1	4.2e-86	97.02	probable calcium-binding protein CML20 [Benincasa hispida]	[more]
XP_023007103.1	5.7e-83	94.05	probable calcium-binding protein CML20 [Cucurbita maxima]	[more]
XP_008457834.1	9.7e-83	95.81	PREDICTED: probable calcium-binding protein CML20 [Cucumis melo]	[more]

BLAST of HG10000670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82659	1.2e-70	80.24	Probable calcium-binding protein CML20 OS=Arabidopsis thaliana OX=3702 GN=CML20 ...	[more]
P41210	1.1e-68	83.13	Caltractin OS=Atriplex nummularia OX=3553 PE=2 SV=1	[more]
Q7F0J0	2.8e-64	74.40	Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
O23184	1.6e-56	67.07	Calcium-binding protein CML19 OS=Arabidopsis thaliana OX=3702 GN=CML19 PE=1 SV=1	[more]
Q06827	4.4e-54	66.04	Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1	[more]

BLAST of HG10000670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3X1	8.3e-88	98.81	probable calcium-binding protein CML20 OS=Cucurbita maxima OX=3661 GN=LOC1114703...	[more]
A0A6J1EJP7	8.3e-88	98.81	probable calcium-binding protein CML20 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1L6S9	2.8e-83	94.05	probable calcium-binding protein CML20 OS=Cucurbita maxima OX=3661 GN=LOC1114997...	[more]
A0A1S3C6K4	4.7e-83	95.81	probable calcium-binding protein CML20 OS=Cucumis melo OX=3656 GN=LOC103497421 P...	[more]
A0A0A0LPZ5	1.1e-82	95.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G286440 PE=4 SV=1	[more]

BLAST of HG10000670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50360.1	8.3e-72	80.24	centrin2	[more]
AT4G37010.1	1.2e-57	67.07	centrin 2	[more]
AT4G37010.2	1.2e-57	67.07	centrin 2	[more]
AT1G66410.1	1.9e-31	45.07	calmodulin 4	[more]
AT5G37780.1	1.9e-31	45.07	calmodulin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 63..91 e-value: 5.7E-7 score: 39.2 coord: 100..128 e-value: 0.012 score: 24.8 coord: 27..55 e-value: 3.4E-8 score: 43.2 coord: 136..164 e-value: 2.7E-5 score: 33.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 99..162 e-value: 2.5E-13 score: 50.3 coord: 26..88 e-value: 1.0E-16 score: 61.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 96..131 score: 12.755995
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 132..167 score: 12.811786
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 59..94 score: 14.652882
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 23..58 score: 16.856619
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 27..89 e-value: 2.00279E-19 score: 75.2769
None	No IPR available	GENE3D	1.10.238.10		coord: 6..88 e-value: 2.4E-28 score: 100.1
None	No IPR available	GENE3D	1.10.238.10		coord: 89..166 e-value: 5.2E-24 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	PANTHER	PTHR23050:SF398	CALTRACTIN-LIKE	coord: 15..167
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 15..167
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 36..48
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 109..121
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 145..157
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 72..84
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 14..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000670.1	HG10000670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005814	centriole
molecular_function	GO:0005509	calcium ion binding