
HG10000669 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGTGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTAAAAAAAACAACCAACGAAAAATTATTCAACGTGACTGTCACTCCTTTTTAACTTTTGTTTGTTGTTAAATTATTGAAAGGGTACTTTTGGAATTTGTATTTTTTTCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAG ATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGTGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAG ATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGTGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAG MYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEFSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRGRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEGESSCKDVEIDF Homology
BLAST of HG10000669 vs. NCBI nr
Match: XP_038902682.1 (uncharacterized protein LOC120089319 [Benincasa hispida]) HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83 Identity = 166/183 (90.71%), Postives = 171/183 (93.44%), Query Frame = 0
BLAST of HG10000669 vs. NCBI nr
Match: XP_004148034.1 (uncharacterized protein LOC101205218 [Cucumis sativus] >KGN62010.1 hypothetical protein Csa_006289 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 4.2e-79 Identity = 164/186 (88.17%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of HG10000669 vs. NCBI nr
Match: XP_008457833.1 (PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 uncharacterized protein E6C27_scaffold243G003410 [Cucumis melo var. makuwa] >TYJ99465.1 uncharacterized protein E5676_scaffold123G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78 Identity = 164/187 (87.70%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of HG10000669 vs. NCBI nr
Match: XP_022947995.1 (uncharacterized protein LOC111451708 [Cucurbita moschata]) HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58 Identity = 142/178 (79.78%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of HG10000669 vs. NCBI nr
Match: KAG6605249.1 (hypothetical protein SDJN03_02566, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035212.1 hypothetical protein SDJN02_02007, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56 Identity = 141/178 (79.21%), Postives = 150/178 (84.27%), Query Frame = 0
BLAST of HG10000669 vs. ExPASy TrEMBL
Match: A0A0A0LJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285940 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79 Identity = 164/186 (88.17%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of HG10000669 vs. ExPASy TrEMBL
Match: A0A5A7TUK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00280 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78 Identity = 164/187 (87.70%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of HG10000669 vs. ExPASy TrEMBL
Match: A0A1S3C600 (uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78 Identity = 164/187 (87.70%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of HG10000669 vs. ExPASy TrEMBL
Match: A0A6J1G8G3 (uncharacterized protein LOC111451708 OS=Cucurbita moschata OX=3662 GN=LOC111451708 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.6e-58 Identity = 142/178 (79.78%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of HG10000669 vs. ExPASy TrEMBL
Match: A0A6J1KZD6 (uncharacterized protein LOC111499636 OS=Cucurbita maxima OX=3661 GN=LOC111499636 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 6.4e-57 Identity = 141/178 (79.21%), Postives = 150/178 (84.27%), Query Frame = 0
BLAST of HG10000669 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-22 Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of HG10000669 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14 Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of HG10000669 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). ) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10 Identity = 51/122 (41.80%), Postives = 65/122 (53.28%), Query Frame = 0
BLAST of HG10000669 vs. TAIR 10
Match: AT3G19200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 4.2e-08 Identity = 50/120 (41.67%), Postives = 61/120 (50.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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