HG10000631 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000631
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein
Location	Chr09: 7174326 .. 7176522 (-)
RNA-Seq Expression	HG10000631
Synteny	HG10000631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGGCTTCTGTGTGCTCGGTAGGGATGGAGTTGGAGCCGGAGATTGATCGCTTGCCGATTGACCTACTCGCTCATATTTTCGCCATGATCACTTCCTTCACCGATTTGGCTCAGTAATGCATTCTTAATTTCGGTTTTTATGAATACGTTTTTTTTTTCTTCAATTGCTCTGGTTCTTGTTCCCTAATTTTTTAGGGTTTATGTGATTCCGGAAAAACGCAGGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCAAGAGCTCGACATGTAATCTCTCTCTCTCTCTCTCTCTCTGTGAAATTTCAGTCTGCTTCTTAAATTTTCTTCAGATTGCTTTTCTTCGTTGCTTTTCTTCGAGTAGTTTCTGATTACAGATAGCTATTGGTATTATGAGAAGTGAGAGATTTCCATTTTCCGTTTATCGTTAGTCGGCAATTTGATTATAAAGCACAAAAACAGAGGTTTCTCGTAAGATATGATATTGTTTGGGCATATTTTCGGGAGAAGGTTCTTCGAAATTGTTTTATAAAGCTGATTATATTCTTCTATAAAATATGGATGATAACTCCACTGCTCGCCCTATTCGACATGCCGAGCTCGACATGTAATCTCTCTATCTCTCTCTGAAATTTCAGTTTGCTTCTGAAATTTTCACTAGTTTGCTTTTCTTCGAGTAGTTTCTGATTACAGATGGCAATTGGTGTTGTGAGCAGTGAGATGAAACGAGTTTTTCAAATTCGCTAGGTTAATCAATTCAATTGGCTTTCCGTTTATCATTAGTCAGCCAATTTGATTATGAACCACAAAAACAGAGGTTTCTCTTAAGATGTTACGTTGTTTGGGCTTATTTTTGGGAGAAAGTTCTTTAAGATTGTTTTGTAAAGCTGGTTATATTCTTGATGTTTATGGCTCGTGTTTTTTGTTGATCTTGAGGACTTTTTTTTTTTCCCCAGCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAGATCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGGTATGATATTATCTTATCTTAGAACAAACATTCCTAAAGAAATAGTCCTTAAAATAGGCCTTAATTTGTTATCAGAGTATGACTTAGGTGGAAATTGAACTACTGAATTTCTGTATATTTGACTTGTTCTACAATATCTGTTGTTTCTATCTTCATTTCTCCACCAATATGTGTTCTGTATTGTCTTAGTTATTTTGGATCTTCTAGAGTCCACCTTCGAAAAGTAAACAACAGTTTAAGAGATCCTCTGGTCCTGAAATTTCATATTCTTCAGAGGAATATAGGGGGAGATTTTGACAACAATTTTTTATTCTCTCTATTTCAGAAATTTCTTAATGTCTAGGTCATTGTGCATGATTTTGGAAATACTGCACATATTGTTGAAGATTTCAATTTTTTACTTGTTCTTAGTATTTACTCTCAACTAAAAGGTCATAGGTTCGAGAACCTCATGCCACATATTGTTGAACTAAAAAAATATGTTCTTTACTTCACTTTTGTAACTAAAAGCTGTTTTTGAAGAACTCCTAAATAGTTCATTAACATTTCACTTCCTTTTTCTAAACCTGCATTTGGTTGTGTTCCCAGATTTCCAGAGCCAACTCCTTGCAAAGCCTGAATATCGGTGGAACCTTTGTCACTGATGTATCTCTGTTTGCAATCGCAGATAGCTGTCCAAATTTGAAGGTGATTATTCTAAGAATCTCCTTTCACTTCCTTTGCTAAACCTTCTCATGAATCATATGATACCTTCATGTTTTGCACAATCTTTAATCAGTGCATTTCCTTCTTAATTCTGCAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACGGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTTGCCTGTTGTGTGA

mRNA sequence

ATGGATTCGGCTTCTGTGTGCTCGGTAGGGATGGAGTTGGAGCCGGAGATTGATCGCTTGCCGATTGACCTACTCGCTCATATTTTCGCCATGATCACTTCCTTCACCGATTTGGCTCAGGTTTATGTGATTCCGGAAAAACGCAGGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCAAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAGATCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCCTTGCAAAGCCTGAATATCGGTGGAACCTTTGTCACTGATGTATCTCTGTTTGCAATCGCAGATAGCTGTCCAAATTTGAAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACGGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTTGCCTGTTGTGTGA

Coding sequence (CDS)

ATGGATTCGGCTTCTGTGTGCTCGGTAGGGATGGAGTTGGAGCCGGAGATTGATCGCTTGCCGATTGACCTACTCGCTCATATTTTCGCCATGATCACTTCCTTCACCGATTTGGCTCAGGTTTATGTGATTCCGGAAAAACGCAGGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAGCTGTCTCTTGGTAGGAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCAAGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAGATCCATTTCGCTTTGGGGTATGGCAGGAATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCCTTGCAAAGCCTGAATATCGGTGGAACCTTTGTCACTGATGTATCTCTGTTTGCAATCGCAGATAGCTGTCCAAATTTGAAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACGGAGACTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTCGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTTGCCTGTTGTGTGA

Protein sequence

MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPVV

Homology

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BLAST of HG10000631 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >KAA0045774.1 F-box protein [Cucumis melo var. makuwa] >TYJ99508.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-119
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDS  V SV MELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL+SISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSL+AIADSCPNLKTIVL
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPV 240
           WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSM PV
Sbjct: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 232

Query: 241 V 242
           V
Sbjct: 241 V 232

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BLAST of HG10000631 vs. NCBI nr
Match: XP_004149695.1 (F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_006050 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 4.6e-118
Identity = 221/241 (91.70%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA V SV MELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 63

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGC ITDHGL+EISLAKC
Sbjct: 64  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKC 123

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL+SISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSL+AIADSCPNLKTIVL
Sbjct: 124 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 183

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPV 240
           WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSM  V
Sbjct: 184 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 235

Query: 241 V 242
           V
Sbjct: 244 V 235

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BLAST of HG10000631 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida])

HSP 1 Score: 428.3 bits (1100), Expect = 4.3e-116
Identity = 220/245 (89.80%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MDSASVCSVGMEL----EPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRK 60
           MD A+V  V ME     EPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGV RK
Sbjct: 1   MDLAAVWPVAMESESEPEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVSRK 60

Query: 61  WKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEIS 120
           WKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGCQITDHGLHEIS
Sbjct: 61  WKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLHEIS 120

Query: 121 LAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLK 180
           LAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSLFAIAD+CPNLK
Sbjct: 121 LAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLK 180

Query: 181 TIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNS 240
           TIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS+LNS
Sbjct: 181 TIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSMLNS 236

Query: 241 MLPVV 242
           M PVV
Sbjct: 241 MWPVV 236

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BLAST of HG10000631 vs. NCBI nr
Match: XP_022927967.1 (F-box protein At5g67140-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 418.3 bits (1074), Expect = 4.5e-113
Identity = 211/242 (87.19%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA+V +VGM+ EPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 10  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 69

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGR++SLSFAGWKMDD+STARLIRHAYSL++LDISRSRWG QITDHGLH+ISLA C
Sbjct: 70  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 129

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL SISLWGMAGITDKGVVQLISRANSLQ+LN+GGTFVTDVSL AIAD+CPNLK+IVL
Sbjct: 130 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 189

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMLP 240
           WSCRHVTE+GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSM P
Sbjct: 190 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 242

Query: 241 VV 242
           VV
Sbjct: 250 VV 242

[Close]

BLAST of HG10000631 vs. NCBI nr
Match: XP_022927966.1 (F-box protein At5g67140-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 418.3 bits (1074), Expect = 4.5e-113
Identity = 211/242 (87.19%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA+V +VGM+ EPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 82

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGR++SLSFAGWKMDD+STARLIRHAYSL++LDISRSRWG QITDHGLH+ISLA C
Sbjct: 83  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 142

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL SISLWGMAGITDKGVVQLISRANSLQ+LN+GGTFVTDVSL AIAD+CPNLK+IVL
Sbjct: 143 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 202

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMLP 240
           WSCRHVTE+GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSM P
Sbjct: 203 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 255

Query: 241 VV 242
           VV
Sbjct: 263 VV 255

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BLAST of HG10000631 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.5e-82
Identity = 148/224 (66.07%), Postives = 181/224 (80.80%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEGVKLSLGRRKS 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQ         A GVC+KW++ V  S+ RR++
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQ---------ASGVCKKWRKAVNQSMARRET 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLW 130
           LSFAGWKMDD+ST+RL+  A++L+ELDISRSRWGC ITD+GL++I+ A+C+ NL S+SLW
Sbjct: 61  LSFAGWKMDDDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLW 120

Query: 131 GMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVLWSCRHVTETG 190
           GM  ITD GVVQLISR +SLQ LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE G
Sbjct: 121 GMTAITDSGVVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERG 180

Query: 191 LLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 235
           LL+LV+KCRKLESIN+WG RVPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 LLVLVNKCRKLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of HG10000631 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 106 QITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGG-TFVTDVS 165
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++      L+ L +   + +TD  
Sbjct: 163 KVSDLGLR--SIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 166 LFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           L AIA SCPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of HG10000631 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-12
Identity = 60/234 (25.64%), Postives = 107/234 (45.73%), Query Frame = 0


Query: 5   SVCSVGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 64
           ++C   M++E     E   +P++LL  I  ++   T +           A  +C  W++ 
Sbjct: 12  NLCFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVII----------ASCICSGWRDA 71

Query: 65  VKLSLGRRKSLSFAGWKM--------------------------DDNSTARLIRHAYSLQ 124
           V L L  R SLS+    M                          +DN+   +  H + LQ
Sbjct: 72  VSLGL-TRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ 131

Query: 125 ELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLN 184
           +LD+S+S    +ITDH L+  SLA+   NL  ++L G    +D  +  L      L+ LN
Sbjct: 132 DLDLSKS---SKITDHSLY--SLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILN 191

Query: 185 IGGTF--VTDVSLFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           + G    V+D +L AI ++C  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 192 LCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of HG10000631 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.9e-12
Identity = 57/217 (26.27%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 20  LPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEGVKLSLGRRKSLSFAGWKM- 79
           +P++LL  I +++    D   V V      A GVC  W++ +   L R + LS+    M 
Sbjct: 31  IPVELLMRILSLV----DDRNVIV------ASGVCTGWRDAISFGLTRLR-LSWCNNNMN 90

Query: 80  -------------------------DDNSTARLIRHAYSLQELDISRSRWGCQITDHGLH 139
                                    +DN+   +  H + LQELD+S+S    +ITD  L+
Sbjct: 91  SLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSLY 150

Query: 140 EISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTF--VTDVSLFAIADS 199
             +LA   P+L  ++L G    +D  +  L      L+ LN+ G    VTD +L AI ++
Sbjct: 151 --ALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNN 210

Query: 200 CPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWG 209
           C  ++++ L  C ++++ G++ L   C  L ++++ G
Sbjct: 211 CNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCG 231

[Close]

BLAST of HG10000631 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-09
Identity = 36/115 (31.30%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 93  LQELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQS 152
           L +L I  S +  ++TD GL   ++A   P+LR +SLW +  ++D G+ ++      ++ 
Sbjct: 140 LGKLQIRGSGFESKVTDVGLG--AVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEK 199

Query: 153 LNIGG-TFVTDVSLFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           L++     +TD  L AIA++C NL  + + SC  V   GL  +  +C  L SI++
Sbjct: 200 LDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISI 252

[Close]

BLAST of HG10000631 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDS  V SV MELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL+SISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSL+AIADSCPNLKTIVL
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPV 240
           WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSM PV
Sbjct: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 232

Query: 241 V 242
           V
Sbjct: 241 V 232

[Close]

BLAST of HG10000631 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDS  V SV MELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL+SISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSL+AIADSCPNLKTIVL
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPV 240
           WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSM PV
Sbjct: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 232

Query: 241 V 242
           V
Sbjct: 241 V 232

[Close]

BLAST of HG10000631 vs. ExPASy TrEMBL
Match: A0A0A0LPU5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 221/241 (91.70%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA V SV MELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 63

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSL+ELDISRSRWGC ITDHGL+EISLAKC
Sbjct: 64  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKC 123

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL+SISLWGMAGITDKGVVQLISRANSLQ+LNIGGTFVTDVSL+AIADSCPNLKTIVL
Sbjct: 124 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 183

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMLPV 240
           WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSM  V
Sbjct: 184 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 235

Query: 241 V 242
           V
Sbjct: 244 V 235

[Close]

BLAST of HG10000631 vs. ExPASy TrEMBL
Match: A0A6J1EIZ0 (F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.2e-113
Identity = 211/242 (87.19%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA+V +VGM+ EPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 82

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGR++SLSFAGWKMDD+STARLIRHAYSL++LDISRSRWG QITDHGLH+ISLA C
Sbjct: 83  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 142

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL SISLWGMAGITDKGVVQLISRANSLQ+LN+GGTFVTDVSL AIAD+CPNLK+IVL
Sbjct: 143 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 202

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMLP 240
           WSCRHVTE+GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSM P
Sbjct: 203 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 255

Query: 241 VV 242
           VV
Sbjct: 263 VV 255

[Close]

BLAST of HG10000631 vs. ExPASy TrEMBL
Match: A0A6J1EIM3 (F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.2e-113
Identity = 211/242 (87.19%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 1   MDSASVCSVGMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 60
           MDSA+V +VGM+ EPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 10  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 69

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKC 120
           VKLSLGR++SLSFAGWKMDD+STARLIRHAYSL++LDISRSRWG QITDHGLH+ISLA C
Sbjct: 70  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 129

Query: 121 IPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVL 180
           IPNL SISLWGMAGITDKGVVQLISRANSLQ+LN+GGTFVTDVSL AIAD+CPNLK+IVL
Sbjct: 130 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 189

Query: 181 WSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMLP 240
           WSCRHVTE+GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSM P
Sbjct: 190 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 242

Query: 241 VV 242
           VV
Sbjct: 250 VV 242

[Close]

BLAST of HG10000631 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83
Identity = 148/224 (66.07%), Postives = 181/224 (80.80%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEGVKLSLGRRKS 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQ         A GVC+KW++ V  S+ RR++
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQ---------ASGVCKKWRKAVNQSMARRET 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLQELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLW 130
           LSFAGWKMDD+ST+RL+  A++L+ELDISRSRWGC ITD+GL++I+ A+C+ NL S+SLW
Sbjct: 61  LSFAGWKMDDDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLW 120

Query: 131 GMAGITDKGVVQLISRANSLQSLNIGGTFVTDVSLFAIADSCPNLKTIVLWSCRHVTETG 190
           GM  ITD GVVQLISR +SLQ LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE G
Sbjct: 121 GMTAITDSGVVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERG 180

Query: 191 LLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLL 235
           LL+LV+KCRKLESIN+WG RVPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 LLVLVNKCRKLESINLWGTRVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of HG10000631 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-13
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 106 QITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGG-TFVTDVS 165
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++      L+ L +   + +TD  
Sbjct: 163 KVSDLGLR--SIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 166 LFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           L AIA SCPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of HG10000631 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13
Identity = 60/234 (25.64%), Postives = 107/234 (45.73%), Query Frame = 0


Query: 5   SVCSVGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 64
           ++C   M++E     E   +P++LL  I  ++   T +           A  +C  W++ 
Sbjct: 12  NLCFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVII----------ASCICSGWRDA 71

Query: 65  VKLSLGRRKSLSFAGWKM--------------------------DDNSTARLIRHAYSLQ 124
           V L L  R SLS+    M                          +DN+   +  H + LQ
Sbjct: 72  VSLGL-TRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ 131

Query: 125 ELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLN 184
           +LD+S+S    +ITDH L+  SLA+   NL  ++L G    +D  +  L      L+ LN
Sbjct: 132 DLDLSKS---SKITDHSLY--SLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILN 191

Query: 185 IGGTF--VTDVSLFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           + G    V+D +L AI ++C  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 192 LCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of HG10000631 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13
Identity = 60/234 (25.64%), Postives = 107/234 (45.73%), Query Frame = 0


Query: 5   SVCSVGMELE----PEIDRLPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEG 64
           ++C   M++E     E   +P++LL  I  ++   T +           A  +C  W++ 
Sbjct: 12  NLCFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVII----------ASCICSGWRDA 71

Query: 65  VKLSLGRRKSLSFAGWKM--------------------------DDNSTARLIRHAYSLQ 124
           V L L  R SLS+    M                          +DN+   +  H + LQ
Sbjct: 72  VSLGL-TRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ 131

Query: 125 ELDISRSRWGCQITDHGLHEISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLN 184
           +LD+S+S    +ITDH L+  SLA+   NL  ++L G    +D  +  L      L+ LN
Sbjct: 132 DLDLSKS---SKITDHSLY--SLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILN 191

Query: 185 IGGTF--VTDVSLFAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINV 207
           + G    V+D +L AI ++C  L+++ L  C ++++ G++ L   C  L ++++
Sbjct: 192 LCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDL 229

[Close]

BLAST of HG10000631 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13
Identity = 57/217 (26.27%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 20  LPIDLLAHIFAMITSFTDLAQVYVIPEKRRACGVCRKWKEGVKLSLGRRKSLSFAGWKM- 79
           +P++LL  I +++    D   V V      A GVC  W++ +   L R + LS+    M 
Sbjct: 31  IPVELLMRILSLV----DDRNVIV------ASGVCTGWRDAISFGLTRLR-LSWCNNNMN 90

Query: 80  -------------------------DDNSTARLIRHAYSLQELDISRSRWGCQITDHGLH 139
                                    +DN+   +  H + LQELD+S+S    +ITD  L+
Sbjct: 91  SLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSLY 150

Query: 140 EISLAKCIPNLRSISLWGMAGITDKGVVQLISRANSLQSLNIGGTF--VTDVSLFAIADS 199
             +LA   P+L  ++L G    +D  +  L      L+ LN+ G    VTD +L AI ++
Sbjct: 151 --ALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNN 210

Query: 200 CPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWG 209
           C  ++++ L  C ++++ G++ L   C  L ++++ G
Sbjct: 211 CNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCG 231

The following BLAST results are available for this feature:

BLAST of HG10000631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457759.1	7.1e-119	92.12	PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-b...	[more]
XP_004149695.1	4.6e-118	91.70	F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_0...	[more]
XP_038902095.1	4.3e-116	89.80	F-box protein At5g67140-like [Benincasa hispida]	[more]
XP_022927967.1	4.5e-113	87.19	F-box protein At5g67140-like isoform X2 [Cucurbita moschata]	[more]
XP_022927966.1	4.5e-113	87.19	F-box protein At5g67140-like isoform X1 [Cucurbita moschata]	[more]

BLAST of HG10000631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH99	2.5e-82	66.07	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]
Q9SKK0	3.5e-12	35.29	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
O49286	4.6e-12	25.64	F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1	[more]
Q9LPL4	7.9e-12	26.27	F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1	[more]
Q708Y0	6.2e-09	31.30	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]

BLAST of HG10000631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1P2	3.4e-119	92.12	F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1	[more]
A0A5D3BMX7	3.4e-119	92.12	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 ...	[more]
A0A0A0LPU5	2.2e-118	91.70	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 ...	[more]
A0A6J1EIZ0	2.2e-113	87.19	F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1EIM3	2.2e-113	87.19	F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of HG10000631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67140.1	1.8e-83	66.07	F-box/RNI-like superfamily protein	[more]
AT2G25490.1	2.5e-13	35.29	EIN3-binding F box protein 1	[more]
AT1G77000.1	3.3e-13	25.64	RNI-like superfamily protein	[more]
AT1G77000.2	3.3e-13	25.64	RNI-like superfamily protein	[more]
AT1G21410.1	5.6e-13	26.27	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 90..120 e-value: 370.0 score: 2.3 coord: 121..146 e-value: 1.2 score: 18.1 coord: 172..197 e-value: 5.8E-4 score: 29.2 coord: 147..171 e-value: 11.0 score: 14.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 63..233 e-value: 1.4E-28 score: 101.5
None	No IPR available	PANTHER	PTHR16134:SF117	SUBFAMILY NOT NAMED	coord: 10..231
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 10..231
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 75..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000631.1	HG10000631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex