HG10000592 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000592
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr09: 6779851 .. 6780689 (+)
RNA-Seq Expression	HG10000592
Synteny	HG10000592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCCAATTGCAGTTACAGCGGCGGAATTTTGGCCTTCTTCCTTTGGATTCTACTCCTTCTGATCAGTTTCATCAATTATCTTATCATAATCATCATCTTCTTCAACCAGAAGACGCTCAGTCGAGTAATGATCTTCTACTATTGCAGCAGTACTTGAGTCAATCTGATCTTCTTCAACCGGAAATGTCGACGGATCAGATCGATCGATTCATTCGATTGCAGGTCTTTACTTCGATTGCTCTCTGTGTGAATTAGTTACGTTCTTGATATTTTGTTGTTAGTTCTTGAATCTTTCGATTTCTTTACTGTAACAGAGTGAAAGATTTAGATTACTTCTGCAACAGAAAATTAATCAACAAATCGGAATGTTATTGAACCAGATCGAAACCAGAACGCGCGTTCTGTTTCAGCAGAAGGATGAGGAGATCGCTTGTGCGAACATGAGAAGAATCCATCTCGAACAATTATTGACGAGATTACAAATGGAGAATCAAGAACGGAAGAAAGCCGTACAAGAGAATCAAGCAACGGTAGCGTCGCTTAGTCGTGCACTCAATCAAATCAGAGAAAGACTTTCATCGTGCGCGAACGACGCCGAGTCCAACAACAACAACAGAAACGGAGAAGACAACGCCATTGATTACGGTAAAAATAAAAAAAGGAAAAAGAAGAAGAAAATGATGATTTGCCAAATCTGCAACTCTCGGATTTCGTGCGTGCTGTTATTGCCTTGCAGGCACCTCTGTTCGTGTAAGCCATGCGAGAGTACTCTCGATTTTTGCCCCGTCTGCAACACGACGAAGAAAGCCAGCATCGAGGCTGTGATTTTCTAG

mRNA sequence

ATGGCCATCCAATTGCAGTTACAGCGGCGGAATTTTGGCCTTCTTCCTTTGGATTCTACTCCTTCTGATCAGTTTCATCAATTATCTTATCATAATCATCATCTTCTTCAACCAGAAGACGCTCAGTCGAGTAATGATCTTCTACTATTGCAGCAGTACTTGAGTCAATCTGATCTTCTTCAACCGGAAATGTCGACGGATCAGATCGATCGATTCATTCGATTGCAGAGTGAAAGATTTAGATTACTTCTGCAACAGAAAATTAATCAACAAATCGGAATGTTATTGAACCAGATCGAAACCAGAACGCGCGTTCTGTTTCAGCAGAAGGATGAGGAGATCGCTTGTGCGAACATGAGAAGAATCCATCTCGAACAATTATTGACGAGATTACAAATGGAGAATCAAGAACGGAAGAAAGCCGTACAAGAGAATCAAGCAACGGTAGCGTCGCTTAGTCGTGCACTCAATCAAATCAGAGAAAGACTTTCATCGTGCGCGAACGACGCCGAGTCCAACAACAACAACAGAAACGGAGAAGACAACGCCATTGATTACGGTAAAAATAAAAAAAGGAAAAAGAAGAAGAAAATGATGATTTGCCAAATCTGCAACTCTCGGATTTCGTGCGTGCTGTTATTGCCTTGCAGGCACCTCTGTTCGTGTAAGCCATGCGAGAGTACTCTCGATTTTTGCCCCGTCTGCAACACGACGAAGAAAGCCAGCATCGAGGCTGTGATTTTCTAG

Coding sequence (CDS)

ATGGCCATCCAATTGCAGTTACAGCGGCGGAATTTTGGCCTTCTTCCTTTGGATTCTACTCCTTCTGATCAGTTTCATCAATTATCTTATCATAATCATCATCTTCTTCAACCAGAAGACGCTCAGTCGAGTAATGATCTTCTACTATTGCAGCAGTACTTGAGTCAATCTGATCTTCTTCAACCGGAAATGTCGACGGATCAGATCGATCGATTCATTCGATTGCAGAGTGAAAGATTTAGATTACTTCTGCAACAGAAAATTAATCAACAAATCGGAATGTTATTGAACCAGATCGAAACCAGAACGCGCGTTCTGTTTCAGCAGAAGGATGAGGAGATCGCTTGTGCGAACATGAGAAGAATCCATCTCGAACAATTATTGACGAGATTACAAATGGAGAATCAAGAACGGAAGAAAGCCGTACAAGAGAATCAAGCAACGGTAGCGTCGCTTAGTCGTGCACTCAATCAAATCAGAGAAAGACTTTCATCGTGCGCGAACGACGCCGAGTCCAACAACAACAACAGAAACGGAGAAGACAACGCCATTGATTACGGTAAAAATAAAAAAAGGAAAAAGAAGAAGAAAATGATGATTTGCCAAATCTGCAACTCTCGGATTTCGTGCGTGCTGTTATTGCCTTGCAGGCACCTCTGTTCGTGTAAGCCATGCGAGAGTACTCTCGATTTTTGCCCCGTCTGCAACACGACGAAGAAAGCCAGCATCGAGGCTGTGATTTTCTAG

Protein sequence

MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLLQPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNNRNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF

Homology

[Close]

BLAST of HG10000592 vs. NCBI nr
Match: XP_038902052.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 207/249 (83.13%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLL 60
           MAIQLQLQRRNFGLLP DSTP+DQFHQL + NHH LQP +AQSS+D L    +L      
Sbjct: 1   MAIQLQLQRRNFGLLPSDSTPADQFHQLFHPNHHPLQPGNAQSSSDDLHTLSFL------ 60

Query: 61  QPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMR 120
            PEMSTDQIDR IRLQSERFR+LL  KINQ+IG+LLNQIETRTRVLFQQKDEEIA AN+R
Sbjct: 61  -PEMSTDQIDRLIRLQSERFRVLLHHKINQEIGVLLNQIETRTRVLFQQKDEEIANANVR 120

Query: 121 RIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAES-NNNNRNG 180
           +IHLEQLLTRLQMENQERK+AVQENQA VASLS ALNQIRERLSSCANDAES NNNNR+G
Sbjct: 121 KIHLEQLLTRLQMENQERKRAVQENQAMVASLSHALNQIRERLSSCANDAESNNNNNRDG 180

Query: 181 EDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTK 240
           ED+AIDYG  KKRK KK MMICQICNSRISCVLLLPCRHLCSCKPCESTL+FCPVCNTTK
Sbjct: 181 EDDAIDYG--KKRKTKKMMMICQICNSRISCVLLLPCRHLCSCKPCESTLEFCPVCNTTK 240

Query: 241 KASIEAVIF 249
           KASIEAVIF
Sbjct: 241 KASIEAVIF 240

[Close]

BLAST of HG10000592 vs. NCBI nr
Match: XP_004147074.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucumis sativus] >KGN61937.1 hypothetical protein Csa_006158 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 6.7e-96
Identity = 217/274 (79.20%), Postives = 231/274 (84.31%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSD--QFHQ----LSYHNHHLLQPED--AQS---SND--L 60
           MAIQLQL RRNFG   LDSTPS   QFHQ    L++H+H LLQP D  AQS   +ND  L
Sbjct: 1   MAIQLQLHRRNFG---LDSTPSSDHQFHQLFHLLNHHHHLLLQPPDHAAQSGTNNNDDHL 60

Query: 61  LLLQQY--LSQSDLLQ------PEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQI 120
           LLLQQY  L+QSD  Q       EM  D IDRFIRLQSERFRLLLQQKINQQIG+LLNQI
Sbjct: 61  LLLQQYYSLTQSDFHQSLTSFLSEMPADHIDRFIRLQSERFRLLLQQKINQQIGVLLNQI 120

Query: 121 ETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQI 180
           ETRTRVLFQQKDEEIACANMRR+HLEQLLTRLQMENQERKK+VQENQA VASLSRALNQI
Sbjct: 121 ETRTRVLFQQKDEEIACANMRRMHLEQLLTRLQMENQERKKSVQENQAMVASLSRALNQI 180

Query: 181 RERLSSCANDAESNNNN-----RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLL 240
           RE++S CANDAESNNNN     RNGED+AIDYG  KK+KKKKKMMIC+ICNSR+SCVLLL
Sbjct: 181 REKVSLCANDAESNNNNNSNNYRNGEDDAIDYG--KKKKKKKKMMICKICNSRVSCVLLL 240

Query: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF
Sbjct: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 269

[Close]

BLAST of HG10000592 vs. NCBI nr
Match: XP_008457700.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 3.1e-93
Identity = 207/275 (75.27%), Postives = 225/275 (81.82%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGL------LPLDSTPSDQFHQLSY---HNHHLLQPED--------AQS 60
           MAIQLQL  R+FG+       P  S+   QFHQL +   H+H LLQP +          +
Sbjct: 1   MAIQLQLHSRDFGIHSTTAPPPPSSSSDHQFHQLCHLLNHHHLLLQPREDHHAAQISGNN 60

Query: 61  SNDLLLLQQY-LSQSDLLQ------PEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLL 120
           ++ LLLLQQY L+QSDL Q       EM +D IDRFIRLQSERFRLLLQQKINQQIG+LL
Sbjct: 61  NDHLLLLQQYCLTQSDLHQSLSSFVSEMPSDHIDRFIRLQSERFRLLLQQKINQQIGVLL 120

Query: 121 NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRAL 180
           NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKK+VQENQA VASLSRAL
Sbjct: 121 NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKSVQENQAMVASLSRAL 180

Query: 181 NQIRERLSSCANDAESNNNN---RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLL 240
           NQIRE++S CANDAESNNNN   RNGED+AIDYGK K  KKKKKMMIC+ICNSR+SCVLL
Sbjct: 181 NQIREKVSLCANDAESNNNNNNYRNGEDDAIDYGKTK--KKKKKMMICKICNSRVSCVLL 240

Query: 241 LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF
Sbjct: 241 LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 273

[Close]

BLAST of HG10000592 vs. NCBI nr
Match: XP_031736523.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 6.0e-81
Identity = 196/274 (71.53%), Postives = 209/274 (76.28%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSD--QFHQ----LSYHNHHLLQPED--AQS---SND--L 60
           MAIQLQL RRNFG   LDSTPS   QFHQ    L++H+H LLQP D  AQS   +ND  L
Sbjct: 1   MAIQLQLHRRNFG---LDSTPSSDHQFHQLFHLLNHHHHLLLQPPDHAAQSGTNNNDDHL 60

Query: 61  LLLQQY--LSQSDLLQ------PEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQI 120
           LLLQQY  L+QSD  Q       EM  D IDRFIRL                      QI
Sbjct: 61  LLLQQYYSLTQSDFHQSLTSFLSEMPADHIDRFIRL----------------------QI 120

Query: 121 ETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQI 180
           ETRTRVLFQQKDEEIACANMRR+HLEQLLTRLQMENQERKK+VQENQA VASLSRALNQI
Sbjct: 121 ETRTRVLFQQKDEEIACANMRRMHLEQLLTRLQMENQERKKSVQENQAMVASLSRALNQI 180

Query: 181 RERLSSCANDAESNNNN-----RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLL 240
           RE++S CANDAESNNNN     RNGED+AIDYG  KK+KKKKKMMIC+ICNSR+SCVLLL
Sbjct: 181 REKVSLCANDAESNNNNNSNNYRNGEDDAIDYG--KKKKKKKKMMICKICNSRVSCVLLL 240

Query: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF
Sbjct: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 247

[Close]

BLAST of HG10000592 vs. NCBI nr
Match: XP_022146109.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 3.8e-75
Identity = 176/248 (70.97%), Postives = 187/248 (75.40%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLL 60
           MAIQLQLQRRNFG LP DS    Q HQ         +P   QS    LL +   S +  L
Sbjct: 1   MAIQLQLQRRNFG-LPFDSPA--QLHQ--------FRPNILQSGEHNLLCRSDHSHAASL 60

Query: 61  QPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMR 120
             EM TD +DRFIRLQSERFRLLLQQK NQQIG+LLNQIETRTRVLFQQKDEEIA AN R
Sbjct: 61  MAEMPTDHMDRFIRLQSERFRLLLQQKRNQQIGVLLNQIETRTRVLFQQKDEEIARANNR 120

Query: 121 RIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNNRNGE 180
           RI LEQ LTRLQMENQER++AVQENQA VASLS AL QIRER+SS AND   +NNN  GE
Sbjct: 121 RIELEQFLTRLQMENQERQRAVQENQAVVASLSHALEQIRERISSGANDDAESNNNVGGE 180

Query: 181 DNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKK 240
           D+AID G        KK MIC+ICNSRISCVL LPCRHLCSCKPCES LDFCPVCN TKK
Sbjct: 181 DDAIDRG--------KKRMICRICNSRISCVLFLPCRHLCSCKPCESGLDFCPVCNATKK 229

Query: 241 ASIEAVIF 249
           ASIEAVIF
Sbjct: 241 ASIEAVIF 229

[Close]

BLAST of HG10000592 vs. ExPASy Swiss-Prot
Match: Q9LDD1 (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11
Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 0


Query: 69  IDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLL 128
           IDR I    ER R+ +++K   Q   ++  +E       + KD+EI       + LE+ +
Sbjct: 141 IDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNLFLEEKV 200

Query: 129 TRLQMENQERKKAVQENQATVASLSRALNQIR--------ERLSSCANDAES---NNNNR 188
             L +ENQ  +   Q N+ATV +L   L Q+         E   + A+DA+S   +N+  
Sbjct: 201 KSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADDAQSCCGSNDEG 260

Query: 189 NGED---NAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPV 244
           + E+         ++ K+  +  M +C+ C    + VLLLPCRH+C C  C S+L+ CP+
Sbjct: 261 DSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNTCPI 320

[Close]

BLAST of HG10000592 vs. ExPASy Swiss-Prot
Match: F4IDI6 (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-10
Identity = 70/251 (27.89%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 18  DSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLLQPEMSTDQ--IDRFIRL 77
           DS+ S+ +H L   N       +A ++     L  +L Q   +   M+  Q  IDRF+ L
Sbjct: 104 DSSRSN-YHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSL 163

Query: 78  ---QSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQ 137
              Q ER +  +++K  +Q   ++  IE       + K+EE          LE+ +  L 
Sbjct: 164 HLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLS 223

Query: 138 MENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNNRNGEDNAIDY------ 197
           +ENQ  +   Q N+AT   L   L  +  ++   +  A     N N ED+A         
Sbjct: 224 IENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGA-GLEKNMNEEDDAESCCGSSCG 283

Query: 198 --GKNKKRKK------------KKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFC 244
             G+   R++            +++  +C+ C    SCVLLLPCRHLC C  C S++  C
Sbjct: 284 GGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTC 343

[Close]

BLAST of HG10000592 vs. ExPASy Swiss-Prot
Match: Q9FHE4 (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 61/196 (31.12%), Postives = 91/196 (46.43%), Query Frame = 0


Query: 61  QPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMR 120
           Q +    +IDRF+  Q+E  R+ L+ +   Q  ML + ++       + KDEEI      
Sbjct: 105 QIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKL 164

Query: 121 RIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQI----------RERLSSCANDA 180
              L++ +  L +ENQ  +   Q N+AT  +L   L Q+          R  L   A+DA
Sbjct: 165 NWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFRRPLVEEADDA 224

Query: 181 ESNNNNRNGED-NAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCEST- 240
           ES+  + +G D  A+  G             C+ C    + VL+LPCRHLC C  C S+ 
Sbjct: 225 ESSCGSCDGGDVTAVVNGG------------CKRCGELTASVLVLPCRHLCLCTVCGSSA 284

Query: 241 -LDFCPVCNTTKKASI 244
            L  CPVC+    AS+
Sbjct: 285 LLRTCPVCDMVMTASV 288

[Close]

BLAST of HG10000592 vs. ExPASy Swiss-Prot
Match: O81851 (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 69/248 (27.82%), Postives = 113/248 (45.56%), Query Frame = 0


Query: 11  NFGLLPLDSTPSDQFHQLSYHNHHLLQPEDA-QSSNDLLLLQQYLSQSDLLQPEMSTDQI 70
           NF + PL ST   +  Q S  N  + +   A  SS+  L+  + +SQ           +I
Sbjct: 69  NFTVPPL-STKRQRDFQFSDSNAPVKRRSVAFDSSSPSLINVELVSQIQ----NQQQSEI 128

Query: 71  DRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLLT 130
           DRF+  Q+E+ R+ ++ +   Q  ML + ++       ++KD+EI         L++ + 
Sbjct: 129 DRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRNLNWVLQERVK 188

Query: 131 RLQMENQERKKAVQENQATVASLSRALNQIRERLSS-------CANDAESNNNNRNGED- 190
            L +ENQ  +   Q N+A   +L   L+Q+  +L +         +DAES+  +  G+  
Sbjct: 189 SLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDDAESSCGSCCGDGG 248

Query: 191 ----NAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPC--ESTLDFCPVC 244
                A+  G             C+ C  R + VL+LPCRHLC C  C   + L  CPVC
Sbjct: 249 GEAVTAVGGG-------------CKRCGEREASVLVLPCRHLCLCTVCGGSALLRTCPVC 298

[Close]

BLAST of HG10000592 vs. ExPASy TrEMBL
Match: A0A0A0LMD7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270790 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.2e-96
Identity = 217/274 (79.20%), Postives = 231/274 (84.31%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSD--QFHQ----LSYHNHHLLQPED--AQS---SND--L 60
           MAIQLQL RRNFG   LDSTPS   QFHQ    L++H+H LLQP D  AQS   +ND  L
Sbjct: 1   MAIQLQLHRRNFG---LDSTPSSDHQFHQLFHLLNHHHHLLLQPPDHAAQSGTNNNDDHL 60

Query: 61  LLLQQY--LSQSDLLQ------PEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQI 120
           LLLQQY  L+QSD  Q       EM  D IDRFIRLQSERFRLLLQQKINQQIG+LLNQI
Sbjct: 61  LLLQQYYSLTQSDFHQSLTSFLSEMPADHIDRFIRLQSERFRLLLQQKINQQIGVLLNQI 120

Query: 121 ETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQI 180
           ETRTRVLFQQKDEEIACANMRR+HLEQLLTRLQMENQERKK+VQENQA VASLSRALNQI
Sbjct: 121 ETRTRVLFQQKDEEIACANMRRMHLEQLLTRLQMENQERKKSVQENQAMVASLSRALNQI 180

Query: 181 RERLSSCANDAESNNNN-----RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLL 240
           RE++S CANDAESNNNN     RNGED+AIDYG  KK+KKKKKMMIC+ICNSR+SCVLLL
Sbjct: 181 REKVSLCANDAESNNNNNSNNYRNGEDDAIDYG--KKKKKKKKMMICKICNSRVSCVLLL 240

Query: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF
Sbjct: 241 PCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 269

[Close]

BLAST of HG10000592 vs. ExPASy TrEMBL
Match: A0A1S3C6S8 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucumis melo OX=3656 GN=LOC103497335 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.5e-93
Identity = 207/275 (75.27%), Postives = 225/275 (81.82%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGL------LPLDSTPSDQFHQLSY---HNHHLLQPED--------AQS 60
           MAIQLQL  R+FG+       P  S+   QFHQL +   H+H LLQP +          +
Sbjct: 1   MAIQLQLHSRDFGIHSTTAPPPPSSSSDHQFHQLCHLLNHHHLLLQPREDHHAAQISGNN 60

Query: 61  SNDLLLLQQY-LSQSDLLQ------PEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLL 120
           ++ LLLLQQY L+QSDL Q       EM +D IDRFIRLQSERFRLLLQQKINQQIG+LL
Sbjct: 61  NDHLLLLQQYCLTQSDLHQSLSSFVSEMPSDHIDRFIRLQSERFRLLLQQKINQQIGVLL 120

Query: 121 NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRAL 180
           NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKK+VQENQA VASLSRAL
Sbjct: 121 NQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKSVQENQAMVASLSRAL 180

Query: 181 NQIRERLSSCANDAESNNNN---RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLL 240
           NQIRE++S CANDAESNNNN   RNGED+AIDYGK K  KKKKKMMIC+ICNSR+SCVLL
Sbjct: 181 NQIREKVSLCANDAESNNNNNNYRNGEDDAIDYGKTK--KKKKKMMICKICNSRVSCVLL 240

Query: 241 LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF
Sbjct: 241 LPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 273

[Close]

BLAST of HG10000592 vs. ExPASy TrEMBL
Match: A0A6J1CX68 (probable BOI-related E3 ubiquitin-protein ligase 2 OS=Momordica charantia OX=3673 GN=LOC111015404 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.8e-75
Identity = 176/248 (70.97%), Postives = 187/248 (75.40%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLL 60
           MAIQLQLQRRNFG LP DS    Q HQ         +P   QS    LL +   S +  L
Sbjct: 1   MAIQLQLQRRNFG-LPFDSPA--QLHQ--------FRPNILQSGEHNLLCRSDHSHAASL 60

Query: 61  QPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMR 120
             EM TD +DRFIRLQSERFRLLLQQK NQQIG+LLNQIETRTRVLFQQKDEEIA AN R
Sbjct: 61  MAEMPTDHMDRFIRLQSERFRLLLQQKRNQQIGVLLNQIETRTRVLFQQKDEEIARANNR 120

Query: 121 RIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNNRNGE 180
           RI LEQ LTRLQMENQER++AVQENQA VASLS AL QIRER+SS AND   +NNN  GE
Sbjct: 121 RIELEQFLTRLQMENQERQRAVQENQAVVASLSHALEQIRERISSGANDDAESNNNVGGE 180

Query: 181 DNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKK 240
           D+AID G        KK MIC+ICNSRISCVL LPCRHLCSCKPCES LDFCPVCN TKK
Sbjct: 181 DDAIDRG--------KKRMICRICNSRISCVLFLPCRHLCSCKPCESGLDFCPVCNATKK 229

Query: 241 ASIEAVIF 249
           ASIEAVIF
Sbjct: 241 ASIEAVIF 229

[Close]

BLAST of HG10000592 vs. ExPASy TrEMBL
Match: A0A6J1JD39 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483947 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.9e-74
Identity = 176/252 (69.84%), Postives = 198/252 (78.57%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDL- 60
           MAIQLQLQ+RNFG  PLDS          +H H  LQ  + QSS  LLL Q+  S+SD  
Sbjct: 1   MAIQLQLQQRNFG-RPLDSA-------AEFHRH--LQLGNGQSS--LLLSQECWSKSDSR 60

Query: 61  ---LQPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIAC 120
                PEMS DQIDRFIRL+SERFRLLLQ KINQQI +LLNQIE RTRVLFQQKDEEIA 
Sbjct: 61  IDNFVPEMSVDQIDRFIRLESERFRLLLQHKINQQIRVLLNQIENRTRVLFQQKDEEIAS 120

Query: 121 ANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNN 180
            NMR I LEQLL +L+MENQ RK+AV+ENQA VASLS+AL+++RE+L + ANDAES+NNN
Sbjct: 121 TNMRTIQLEQLLKKLEMENQMRKRAVEENQAMVASLSQALDEMREKLLASANDAESSNNN 180

Query: 181 -RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVC 240
            R GED+A D+G NKKR  KK M+ICQICNSRISCVLLLPCRHLCSCK C S L+FCPVC
Sbjct: 181 VRIGEDDASDFGNNKKR--KKMMLICQICNSRISCVLLLPCRHLCSCKSCASALEFCPVC 238

Query: 241 NTTKKASIEAVI 248
           N TKKASIEAVI
Sbjct: 241 NATKKASIEAVI 238

[Close]

BLAST of HG10000592 vs. ExPASy TrEMBL
Match: A0A6J1FVE9 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448450 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.8e-73
Identity = 175/252 (69.44%), Postives = 197/252 (78.17%), Query Frame = 0


Query: 1   MAIQLQLQRRNFGLLPLDSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDL- 60
           MAIQLQLQ+RNFG  PLDS          +H H  LQ  + QSS  LLL Q+  S+SD  
Sbjct: 1   MAIQLQLQQRNFG-RPLDSA-------AEFHRH--LQLGNGQSS--LLLSQECWSKSDSR 60

Query: 61  ---LQPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIAC 120
                 EMS DQIDRFIRL+SERFRLLLQ KINQQI +LLNQIE RTRVLFQQKDEEIA 
Sbjct: 61  IDNFVAEMSVDQIDRFIRLESERFRLLLQHKINQQIRVLLNQIENRTRVLFQQKDEEIAS 120

Query: 121 ANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNN 180
            NMR I LEQLL +L+MENQ+RK+AV+ENQA VASLS AL+++RE+L + ANDAES+NNN
Sbjct: 121 TNMRTIQLEQLLKKLEMENQKRKRAVEENQAMVASLSHALDEMREKLLASANDAESSNNN 180

Query: 181 -RNGEDNAIDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVC 240
            R GED+A D+G NKKRKK +  MICQICNSRISCVLLLPCRHLCSCK C S L+FCPVC
Sbjct: 181 VRIGEDDASDFGNNKKRKKMR--MICQICNSRISCVLLLPCRHLCSCKSCASALEFCPVC 238

Query: 241 NTTKKASIEAVI 248
           N TKKASIEAVI
Sbjct: 241 NATKKASIEAVI 238

[Close]

BLAST of HG10000592 vs. TAIR 10
Match: AT4G35070.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-30
Identity = 82/224 (36.61%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 26  HQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLLQPEMSTDQIDRFIRLQSERFRLLLQ 85
           H L +H HH  Q   +QS         +L+     Q E    +ID+FI++Q+ER R +LQ
Sbjct: 55  HALFHHQHHQQQQSPSQS---------FLA----AQMEKQKQEIDQFIKIQNERLRYVLQ 114

Query: 86  QKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMENQERKKAVQEN 145
           ++  +++ M+L ++E++  +L  QK+EE++ A  + + LE LL +++MENQ  ++  +EN
Sbjct: 115 EQRKREMEMILRKMESKALLLMSQKEEEMSKALNKNMELEDLLRKMEMENQTWQRMAREN 174

Query: 146 QATVASLSRALNQIRERLSSCANDAESNNNNRNGEDNAIDYGKNKKRKKKKKMMICQICN 205
           +A V +L+  L Q+RER ++C +  E+   +          G +   KK K    C  C 
Sbjct: 175 EAIVQTLNTTLEQVRERAATCYDAGEAEVEDEGSFCGGEGDGNSLPAKKMKMSSCCCNCG 234

Query: 206 SR-ISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF 249
           S  ++ VL LPCRHLC C  CE  L  CP+CNT KK+ IEA+IF
Sbjct: 235 SNGVTRVLFLPCRHLCCCMDCEEGLLLCPICNTPKKSRIEALIF 265

[Close]

BLAST of HG10000592 vs. TAIR 10
Match: AT4G35070.2 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-29
Identity = 79/200 (39.50%), Postives = 122/200 (61.00%), Query Frame = 0


Query: 51  QQYLSQSDL-LQPEMSTDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQ 110
           QQ  SQS L  Q E    +ID+FI++Q+ER R +LQ++  +++ M+L ++E++  +L  Q
Sbjct: 11  QQSPSQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQ 70

Query: 111 KDEEIACANMRRIHLEQLLTRLQMENQERKKAVQENQATVASLSRALNQIRERLSSCAND 170
           K+EE++ A  + + LE LL +++MENQ  ++  +EN+A V +L+  L Q+RER ++C + 
Sbjct: 71  KEEEMSKALNKNMELEDLLRKMEMENQTWQRMARENEAIVQTLNTTLEQVRERAATCYDA 130

Query: 171 AESNNNNRNGEDNAIDYGKNKKRKKKKKMMICQICNSR-ISCVLLLPCRHLCSCKPCEST 230
            E+   +          G +   KK K    C  C S  ++ VL LPCRHLC C  CE  
Sbjct: 131 GEAEVEDEGSFCGGEGDGNSLPAKKMKMSSCCCNCGSNGVTRVLFLPCRHLCCCMDCEEG 190

Query: 231 LDFCPVCNTTKKASIEAVIF 249
           L  CP+CNT KK+ IEA+IF
Sbjct: 191 LLLCPICNTPKKSRIEALIF 210

[Close]

BLAST of HG10000592 vs. TAIR 10
Match: AT1G45976.1 (S-ribonuclease binding protein 1 )

HSP 1 Score: 79.3 bits (194), Expect = 4.7e-15
Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = 0


Query: 69  IDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLL 128
           IDRF+++Q ++ R  +  KI +     ++ +E +     ++KDEE+   N +   LE  +
Sbjct: 150 IDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRM 209

Query: 129 TRLQMENQERKKAVQENQATVASLS----RALNQIRERLSSCA-NDAESNNNNRNGEDNA 188
            +L ME +  ++  + N+  +A+L+    RA  + R+ +  C  ++ +   +  NG DN+
Sbjct: 210 EQLTMEAEAWQQRAKYNENMIAALNYNLDRAQGRPRDSIEGCGDSEVDDTASCFNGRDNS 269

Query: 189 IDYGKNKKRKKKKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKKASI 245
                       K MM+C+ C  R  C+LLLPC H+C CK CE  L  CP+C ++K   +
Sbjct: 270 --------NNNTKTMMMCRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSSKFLGM 322

[Close]

BLAST of HG10000592 vs. TAIR 10
Match: AT1G79110.2 (zinc ion binding )

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-12
Identity = 69/248 (27.82%), Postives = 111/248 (44.76%), Query Frame = 0


Query: 18  DSTPSDQFHQLSYHNHHLLQPEDAQSSNDLLLLQQYLSQSDLLQPEMSTDQ--IDRFIRL 77
           DS+ S+ +H L   N       +A ++     L  +L Q   +   M+  Q  IDRF+ L
Sbjct: 104 DSSRSN-YHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSL 163

Query: 78  QSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLEQLLTRLQMEN 137
             ER +  +++K  +Q   ++  IE       + K+EE          LE+ +  L +EN
Sbjct: 164 HMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIEN 223

Query: 138 QERKKAVQENQATVASLSRALNQIRERLSSCANDAESNNNNRNGEDNAIDY--------G 197
           Q  +   Q N+AT   L   L  +  ++   +  A     N N ED+A           G
Sbjct: 224 QIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGA-GLEKNMNEEDDAESCCGSSCGGGG 283

Query: 198 KNKKRKK------------KKKMMICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVC 244
           +   R++            +++  +C+ C    SCVLLLPCRHLC C  C S++  CP+C
Sbjct: 284 EETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPIC 343

[Close]

BLAST of HG10000592 vs. TAIR 10
Match: AT5G47050.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 52/183 (28.42%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 66  TDQIDRFIRLQSERFRLLLQQKINQQIGMLLNQIETRTRVLFQQKDEEIACANMRRIHLE 125
           TD+++RF+++Q E+ + +L +   +    LL   E   R   ++K+ EI  A  R + LE
Sbjct: 114 TDELNRFLQIQGEQLKRMLAENSERNYRELLRTTEESVRRRLREKEAEIEKATRRHVELE 173

Query: 126 QLLTRLQMENQERKKAVQENQATVASLSRALNQ--IRERLSSCANDAESNNNNRNGEDNA 185
              T+++ E +  +      +A   SL   L+Q  +           E  + + +G D A
Sbjct: 174 ARATQIETEARAWQMRAAAREAEATSLQAQLHQAVVVAHGGGVITTVEPQSGSVDGVDEA 233

Query: 186 IDYGKNKKRKKKKKMM--ICQICNSRISCVLLLPCRHLCSCKPCESTLDFCPVCNTTKKA 245
            D         + +M+   C+IC  R + VL LPCRHL  C  C+ ++  CP+C +TK +
Sbjct: 234 EDAESAYVDPDRVEMIGPGCRICRRRSATVLALPCRHLVMCTECDGSVRICPLCLSTKNS 293

The following BLAST results are available for this feature:

BLAST of HG10000592 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902052.1	1.7e-99	83.13	probable BOI-related E3 ubiquitin-protein ligase 3 [Benincasa hispida]	[more]
XP_004147074.1	6.7e-96	79.20	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucumis sativus] ...	[more]
XP_008457700.1	3.1e-93	75.27	PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Cucumis melo]	[more]
XP_031736523.1	6.0e-81	71.53	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucumis sativus]	[more]
XP_022146109.1	3.8e-75	70.97	probable BOI-related E3 ubiquitin-protein ligase 2 [Momordica charantia]	[more]

BLAST of HG10000592 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDD1	3.1e-11	30.69	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
F4IDI6	7.6e-10	27.89	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9FHE4	1.3e-09	31.12	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
O81851	1.2e-07	27.82	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]

BLAST of HG10000592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMD7	3.2e-96	79.20	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270790 P...	[more]
A0A1S3C6S8	1.5e-93	75.27	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1CX68	1.8e-75	70.97	probable BOI-related E3 ubiquitin-protein ligase 2 OS=Momordica charantia OX=367...	[more]
A0A6J1JD39	5.9e-74	69.84	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1FVE9	3.8e-73	69.44	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita mosch...	[more]

BLAST of HG10000592 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35070.1	8.8e-30	36.61	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G35070.2	9.8e-29	39.50	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G45976.1	4.7e-15	29.83	S-ribonuclease binding protein 1	[more]
AT1G79110.2	4.9e-12	27.82	zinc ion binding	[more]
AT5G47050.1	1.4e-11	28.42	SBP (S-ribonuclease binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..162
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 200..238 e-value: 5.5E-8 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..182
None	No IPR available	PANTHER	PTHR42647:SF6	BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED	coord: 23..247
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 171..246 e-value: 5.4E-11 score: 43.8
IPR017066	E3 ubiquitin-protein ligase BOI-like	PANTHER	PTHR42647	SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN	coord: 23..247
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 201..236 score: 9.700961

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000592.1	HG10000592.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity