HG10000569 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000569
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PI-PLC X-box domain-containing protein
Location	Chr09: 6521226 .. 6521528 (+)
RNA-Seq Expression	HG10000569
Synteny	HG10000569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTGCCGTCGACGAAATTTGAGAGTAATCTGAAATTCTTGTCGGAGCAGACGCCGGTGACGAAGAGGAAATACTTTTACAGAGTAGAGAATACGGTGACGCCGAAGGCCGATAACCCGATTTTGTTTGTGAAGCCGGTGACGAGGAGGATCCATATATTTGCTCGGTTGTTTATTAATCAAAGCTTTGCGAAGGGCGTCGCCGATAAGTTGCAGGTTTTGTCAACGGATTTCATTGATGGGGATTTTGTGGATGCTTGCGTTGGACTTACGAGTGCAAGAATTGAAGGAAAGGCCTAA

mRNA sequence

ATGTATCTGCCGTCGACGAAATTTGAGAGTAATCTGAAATTCTTGTCGGAGCAGACGCCGGTGACGAAGAGGAAATACTTTTACAGAGTAGAGAATACGGTGACGCCGAAGGCCGATAACCCGATTTTGTTTGTGAAGCCGGTGACGAGGAGGATCCATATATTTGCTCGGTTGTTTATTAATCAAAGCTTTGCGAAGGGCGTCGCCGATAAGTTGCAGGTTTTGTCAACGGATTTCATTGATGGGGATTTTGTGGATGCTTGCGTTGGACTTACGAGTGCAAGAATTGAAGGAAAGGCCTAA

Coding sequence (CDS)

ATGTATCTGCCGTCGACGAAATTTGAGAGTAATCTGAAATTCTTGTCGGAGCAGACGCCGGTGACGAAGAGGAAATACTTTTACAGAGTAGAGAATACGGTGACGCCGAAGGCCGATAACCCGATTTTGTTTGTGAAGCCGGTGACGAGGAGGATCCATATATTTGCTCGGTTGTTTATTAATCAAAGCTTTGCGAAGGGCGTCGCCGATAAGTTGCAGGTTTTGTCAACGGATTTCATTGATGGGGATTTTGTGGATGCTTGCGTTGGACTTACGAGTGCAAGAATTGAAGGAAAGGCCTAA

Protein sequence

MYLPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQSFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA

Homology

[Close]

BLAST of HG10000569 vs. NCBI nr
Match: XP_008457664.1 (PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis melo] >ADN34004.1 1-phosphatidylinositol phosphodiesterase [Cucumis melo subsp. melo] >KAA0045715.1 PI-PLC X-box domain-containing protein [Cucumis melo var. makuwa] >TYJ99565.1 PI-PLC X-box domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFESNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. NCBI nr
Match: XP_004147027.1 (PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis sativus] >AVN99020.1 hypothetical protein [Cucumis sativus] >KGN61912.1 hypothetical protein Csa_006502 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 6.9e-44
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKF+SNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFDSNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. NCBI nr
Match: XP_038902789.1 (PI-PLC X-box domain-containing protein DDB_G0293730 [Benincasa hispida])

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-43
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFI+Q
Sbjct: 221 LPSTKFESNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFIHQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SF KGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFTKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. NCBI nr
Match: XP_023534290.1 (PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 88/98 (89.80%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKF+SN+K LSEQ PVTKRKYFYRVENTVTPKADNP+L VKPVT+RIH FARLFINQ
Sbjct: 221 LPSTKFDSNIKHLSEQPPVTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARI+G+A
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of HG10000569 vs. NCBI nr
Match: XP_022971055.1 (PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 88/98 (89.80%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKF+SN+K LSEQ PVTKRKYFYRVENTVTPKADNP+L VKPVT+RIH FARLFINQ
Sbjct: 221 LPSTKFDSNIKHLSEQPPVTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARI+G+A
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of HG10000569 vs. ExPASy TrEMBL
Match: A0A5D3BMM2 (PI-PLC X-box domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001350 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFESNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. ExPASy TrEMBL
Match: E5GC05 (1-phosphatidylinositol phosphodiesterase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFESNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. ExPASy TrEMBL
Match: A0A1S3C6P4 (PI-PLC X-box domain-containing protein DDB_G0293730 OS=Cucumis melo OX=3656 GN=LOC103497310 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFESNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. ExPASy TrEMBL
Match: A0A0A0LMA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264560 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKF+SNLKFLSEQ PVTKRKYFYRVENTVTPKADNPIL VKPVTRRIH FARLFINQ
Sbjct: 221 LPSTKFDSNLKFLSEQPPVTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of HG10000569 vs. ExPASy TrEMBL
Match: A0A6J1I4N5 (PI-PLC X-box domain-containing protein DDB_G0293730-like OS=Cucurbita maxima OX=3661 GN=LOC111469840 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 88/98 (89.80%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKF+SN+K LSEQ PVTKRKYFYRVENTVTPKADNP+L VKPVT+RIH FARLFINQ
Sbjct: 221 LPSTKFDSNIKHLSEQPPVTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
           SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARI+G+A
Sbjct: 281 SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of HG10000569 vs. TAIR 10
Match: AT4G34920.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 3.3e-36
Identity = 72/97 (74.23%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LP TKF+SNLK LSEQ P + RK+FYRVENTVTP+ADNP+++VKPVT RI   ARLFI+Q
Sbjct: 221 LPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQ 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGK 100
             +KG  DKLQ+LSTDFI+GDFVDACVGLT ARIEGK
Sbjct: 281 CVSKGCGDKLQILSTDFIEGDFVDACVGLTHARIEGK 317

[Close]

BLAST of HG10000569 vs. TAIR 10
Match: AT4G38690.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-35
Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LPSTKFESN+K LS+Q P T RK+FYRVENTVTP+ DNPI+ VKPVT+RIH +A++FI +
Sbjct: 221 LPSTKFESNIKHLSQQQPATSRKFFYRVENTVTPQPDNPIMCVKPVTKRIHCYAKVFIIE 280

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA 101
              +G ADKLQ+ STDFID +FVDACVGLT AR EGKA
Sbjct: 281 CVKRGCADKLQIFSTDFIDNEFVDACVGLTFARAEGKA 318

[Close]

BLAST of HG10000569 vs. TAIR 10
Match: AT4G34930.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-34
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 3   LPSTKFESNLKFLSEQTPVTKRKYFYRVENTVTPKADNPILFVKPVTRRIHIFARLFINQ 62
           LP TKF+SNLK LSEQ P++ RK+FYRVENTVTP+ADNP+++VK VT RI   ARLFI+Q
Sbjct: 288 LPWTKFQSNLKHLSEQQPISSRKFFYRVENTVTPQADNPVVWVKQVTDRIRKHARLFISQ 347

Query: 63  SFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGK 100
             +KG  DKLQ+LSTDFI+GDFVDACVGLT AR++G+
Sbjct: 348 CASKGYGDKLQILSTDFIEGDFVDACVGLTHARMKGQ 384

The following BLAST results are available for this feature:

BLAST of HG10000569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457664.1	3.1e-44	96.94	PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis melo] >A...	[more]
XP_004147027.1	6.9e-44	95.92	PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis sativus] >AVN99020....	[more]
XP_038902789.1	3.4e-43	94.90	PI-PLC X-box domain-containing protein DDB_G0293730 [Benincasa hispida]	[more]
XP_023534290.1	1.1e-41	89.80	PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita pepo subsp. ...	[more]
XP_022971055.1	1.1e-41	89.80	PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita maxima]	[more]

BLAST of HG10000569 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10000569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMM2	1.5e-44	96.94	PI-PLC X-box domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
E5GC05	1.5e-44	96.94	1-phosphatidylinositol phosphodiesterase OS=Cucumis melo subsp. melo OX=412675 P...	[more]
A0A1S3C6P4	1.5e-44	96.94	PI-PLC X-box domain-containing protein DDB_G0293730 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LMA4	3.4e-44	95.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264560 PE=4 SV=1	[more]
A0A6J1I4N5	5.4e-42	89.80	PI-PLC X-box domain-containing protein DDB_G0293730-like OS=Cucurbita maxima OX=...	[more]

BLAST of HG10000569 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34920.1	3.3e-36	74.23	PLC-like phosphodiesterases superfamily protein	[more]
AT4G38690.1	1.3e-35	70.41	PLC-like phosphodiesterases superfamily protein	[more]
AT4G34930.1	3.1e-34	70.10	PLC-like phosphodiesterases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13593:SF101	1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN	coord: 3..97
None	No IPR available	PANTHER	PTHR13593	UNCHARACTERIZED	coord: 3..97
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	SUPERFAMILY	51695	PLC-like phosphodiesterases	coord: 5..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000569.1	HG10000569.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0008081	phosphoric diester hydrolase activity