HG10000557 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000557
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr09: 6399632 .. 6399985 (-)
RNA-Seq ExpressionHG10000557
SyntenyHG10000557
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGGTGAATTTTACCAGTTTAGGAGGAAGTTCTGCAGAAGAGAGGGAGACATTTTCAAGCTCAGTAAGAAGTGGACGGAAAGGATCCCACCAGAGAGACGAGTCGACGGAAGTGGAGGTAGCCATGCGAGATGTCCCCGCGAGAGCTTGGGAGCTGAACCCTAGCAAGGAAAGCGGGAAATGTCTGTGTGATTCTCTCTTCTTTCGCGCCTCTGAGTTTCAGAGGGCTTCGGCTATTGCCACGCAGCGGCTCAGGAGAAGAGGAAGTGAGTTGCTAGTACCGGAGAAATTTGTAATGCGTTTGGCTTTCGCGCTAGCTAATGCGGTGCGTCAATTCCAAAATGTTTAG

mRNA sequence

ATGGAGGGGGTGAATTTTACCAGTTTAGGAGGAAGTTCTGCAGAAGAGAGGGAGACATTTTCAAGCTCAGTAAGAAGTGGACGGAAAGGATCCCACCAGAGAGACGAGTCGACGGAAGTGGAGGTAGCCATGCGAGATGTCCCCGCGAGAGCTTGGGAGCTGAACCCTAGCAAGGAAAGCGGGAAATGTCTGTGTGATTCTCTCTTCTTTCGCGCCTCTGAGTTTCAGAGGGCTTCGGCTATTGCCACGCAGCGGCTCAGGAGAAGAGGAAGTGAGTTGCTAGTACCGGAGAAATTTGTAATGCGTTTGGCTTTCGCGCTAGCTAATGCGGTGCGTCAATTCCAAAATGTTTAG

Coding sequence (CDS)

ATGGAGGGGGTGAATTTTACCAGTTTAGGAGGAAGTTCTGCAGAAGAGAGGGAGACATTTTCAAGCTCAGTAAGAAGTGGACGGAAAGGATCCCACCAGAGAGACGAGTCGACGGAAGTGGAGGTAGCCATGCGAGATGTCCCCGCGAGAGCTTGGGAGCTGAACCCTAGCAAGGAAAGCGGGAAATGTCTGTGTGATTCTCTCTTCTTTCGCGCCTCTGAGTTTCAGAGGGCTTCGGCTATTGCCACGCAGCGGCTCAGGAGAAGAGGAAGTGAGTTGCTAGTACCGGAGAAATTTGTAATGCGTTTGGCTTTCGCGCTAGCTAATGCGGTGCGTCAATTCCAAAATGTTTAG

Protein sequence

MEGVNFTSLGGSSAEERETFSSSVRSGRKGSHQRDESTEVEVAMRDVPARAWELNPSKESGKCLCDSLFFRASEFQRASAIATQRLRRRGSELLVPEKFVMRLAFALANAVRQFQNV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000557.1HG10000557.1mRNA