HG10000491 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000491
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Beta-galactosidase
Location	Chr09: 5815196 .. 5815772 (+)
RNA-Seq Expression	HG10000491
Synteny	HG10000491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCAAAAAATTTGATTGTGGTTTTTGAGGAGGTTGGGGGGAATCCTTCAAAGATTAGTCTTGTAAAGAGATCAATAACAAGTATTTGTACGGAGGCATCTGAGTATCGCCCTGTCGTCAAGAACGAGCACACTCGTCAAAACCATGGAGAATTGAATGAGCAGAATGTGCTTAAGATCAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCTTGAGCAGGGGACCTGTTATTCTCCAAAATCACTTTCTGTGTTGCAAAAGGTATCTGAATTTACACCATCATATGAATGATATAACCAACATTTTCAAAATTTGACTTAGATGATTGATCTGTAAATGGCGAAATAAAAAATTCAAAATTCAATACCATGCTCCTAACTTTCTACTCTGTCCTTTCCAGCTATGTGTTGGTCGACGGAGATGCTTGGCGACCGTACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTAAGGAAAAAATTATCTGCTGAAGTCCTCTGCCAACCAGTAGCTACATAA

mRNA sequence

ATGCCATCAAAAAATTTGATTGTGGTTTTTGAGGAGGTTGGGGGGAATCCTTCAAAGATTAGTCTTGTAAAGAGATCAATAACAAGTATTTGTACGGAGGCATCTGAGTATCGCCCTGTCGTCAAGAACGAGCACACTCGTCAAAACCATGGAGAATTGAATGAGCAGAATGTGCTTAAGATCAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCTTGAGCAGGGGACCTGTTATTCTCCAAAATCACTTTCTGTGTTGCAAAAGCTATGTGTTGGTCGACGGAGATGCTTGGCGACCGTACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTAAGGAAAAAATTATCTGCTGAAGTCCTCTGCCAACCAGTAGCTACATAA

Coding sequence (CDS)

ATGCCATCAAAAAATTTGATTGTGGTTTTTGAGGAGGTTGGGGGGAATCCTTCAAAGATTAGTCTTGTAAAGAGATCAATAACAAGTATTTGTACGGAGGCATCTGAGTATCGCCCTGTCGTCAAGAACGAGCACACTCGTCAAAACCATGGAGAATTGAATGAGCAGAATGTGCTTAAGATCAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCTTGAGCAGGGGACCTGTTATTCTCCAAAATCACTTTCTGTGTTGCAAAAGCTATGTGTTGGTCGACGGAGATGCTTGGCGACCGTACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTAAGGAAAAAATTATCTGCTGAAGTCCTCTGCCAACCAGTAGCTACATAA

Protein sequence

MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKINLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSIFGEDPCPNLRKKLSAEVLCQPVAT

Homology

[Close]

BLAST of HG10000491 vs. NCBI nr
Match: XP_038901907.1 (beta-galactosidase 3-like [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MPSKNLIVVFEEVGGNP KISLVKRSITSICTEASEYRPVVKN+HT QNHGELNEQNVLK
Sbjct: 699 MPSKNLIVVFEEVGGNPLKISLVKRSITSICTEASEYRPVVKNKHTHQNHGELNEQNVLK 758

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTP GACGSLEQGTC+S KSLSVLQK+CVGRRRCLATVPTS
Sbjct: 759 INLHCAAGQFISAIKFASFGTPRGACGSLEQGTCHSSKSLSVLQKVCVGRRRCLATVPTS 818

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQP+AT
Sbjct: 819 IFGEDPCPNLRKKLSAEVVCQPIAT 843

[Close]

BLAST of HG10000491 vs. NCBI nr
Match: KAA0045616.1 (beta-galactosidase 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 129/145 (88.97%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+ ELNEQNVLK
Sbjct: 551 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 610

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGS EQGTC+SPKS SVLQKLCVGRRRCLAT+PTS
Sbjct: 611 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 670

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 671 IFGEDPCPNLRKKLSAEVVCQPVAT 695

[Close]

BLAST of HG10000491 vs. NCBI nr
Match: XP_008460995.1 (PREDICTED: beta-galactosidase 5-like [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 129/145 (88.97%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+ ELNEQNVLK
Sbjct: 701 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 760

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGS EQGTC+SPKS SVLQKLCVGRRRCLAT+PTS
Sbjct: 761 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 820

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 821 IFGEDPCPNLRKKLSAEVVCQPVAT 845

[Close]

BLAST of HG10000491 vs. NCBI nr
Match: XP_004150073.1 (beta-galactosidase 5 [Cucumis sativus] >KGN61834.1 hypothetical protein Csa_006172 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 128/145 (88.28%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+GELNEQNVLK
Sbjct: 704 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNNGELNEQNVLK 763

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTPSGACGS +QGTC+SPKS  VLQKLCVGR+RCLAT+PTS
Sbjct: 764 INLHCAAGQFISAIKFASFGTPSGACGSHKQGTCHSPKSDYVLQKLCVGRQRCLATIPTS 823

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 824 IFGEDPCPNLRKKLSAEVVCQPVAT 848

[Close]

BLAST of HG10000491 vs. NCBI nr
Match: XP_022146136.1 (beta-galactosidase 3-like isoform X1 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MPSKNLIVVFEE+ GNPS+I+LVKRS+TSIC EASE+RPV+K+ H  QNHGELN+QNV+K
Sbjct: 721 MPSKNLIVVFEEIDGNPSRINLVKRSVTSICAEASEFRPVIKSWHVNQNHGELNQQNVVK 780

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQ ISAIKFASFGTP G+CGSL QGTC+SP S SVLQKLCVGRRRCLATVPTS
Sbjct: 781 INLHCAAGQSISAIKFASFGTPIGSCGSLGQGTCHSPNSQSVLQKLCVGRRRCLATVPTS 840

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVA 145
           IFGEDPCPN+RKKLSAEV+C PVA
Sbjct: 841 IFGEDPCPNVRKKLSAEVVCAPVA 864

[Close]

BLAST of HG10000491 vs. ExPASy Swiss-Prot
Match: Q9SCV9 (Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-38
Identity = 71/141 (50.35%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           PS+NL+V+FEE+GGNPS +SLVKRS++ +C E SEY P +KN    +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS +QG C++  S ++L++ CVG+ RC  T+  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLRKKLSAEVLCQP 143
           FG+DPCPN+ K+L+ E +C P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 847

[Close]

BLAST of HG10000491 vs. ExPASy Swiss-Prot
Match: Q10RB4 (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.1e-36
Identity = 71/143 (49.65%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           P++NL+VVFEE+GG+ SKI+L KR+++ +C + SEY P +KN    +++GE  E +  K+
Sbjct: 701 PTRNLLVVFEELGGDSSKIALAKRTVSGVCADVSEYHPNIKNWQI-ESYGE-PEFHTAKV 760

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L CA GQ ISAIKFASFGTP G CG+ +QG C+S  S SVL+K C+G +RC+  +  S 
Sbjct: 761 HLKCAPGQTISAIKFASFGTPLGTCGTFQQGECHSINSNSVLEKKCIGLQRCVVAISPSN 820

Query: 122 FGEDPCPNLRKKLSAEVLCQPVA 145
           FG DPCP + K+++ E +C   A
Sbjct: 821 FGGDPCPEVMKRVAVEAVCSTAA 841

[Close]

BLAST of HG10000491 vs. ExPASy Swiss-Prot
Match: Q8W0A1 (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.0e-32
Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           P+ NL+V+FEE GG+P+ IS+VKRSI S+C + SE++P +KN HT+       +    K+
Sbjct: 695 PTGNLLVIFEEWGGDPTGISMVKRSIGSVCADVSEWQPSMKNWHTK-------DYEKAKV 754

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C  GQ I+ IKFASFGTP G+CGS  +G C++ KS  +  K CVG+ RC  +V   I
Sbjct: 755 HLQCDNGQKITEIKFASFGTPQGSCGSYTEGGCHAHKSYDIFWKNCVGQERCGVSVVPEI 814

Query: 122 FGEDPCPNLRKKLSAEVLC 141
           FG DPCP   K+   E +C
Sbjct: 815 FGGDPCPGTMKRAVVEAIC 826

[Close]

BLAST of HG10000491 vs. ExPASy Swiss-Prot
Match: Q9SCW1 (Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-31
Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           PS NL+VVFEE GG+P+ I+LV+R + S+C +  E++  + N     + G++N+    K 
Sbjct: 709 PSGNLLVVFEEWGGDPNGITLVRREVDSVCADIYEWQSTLVNYQLHAS-GKVNKPLHPKA 768

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C  GQ I+ +KFASFGTP G CGS  QG+C++  S     KLCVG+  C  TV   +
Sbjct: 769 HLQCGPGQKITTVKFASFGTPEGTCGSYRQGSCHAHHSYDAFNKLCVGQNWCSVTVAPEM 828

Query: 122 FGEDPCPNLRKKLSAEVLC 141
           FG DPCPN+ KKL+ E +C
Sbjct: 829 FGGDPCPNVMKKLAVEAVC 846

[Close]

BLAST of HG10000491 vs. ExPASy Swiss-Prot
Match: P48980 (Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 67/139 (48.20%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           P+ NL+VVFEE GG+P  I+LVKR I S+C +  E++P + N   R   G+ +     K 
Sbjct: 697 PTGNLLVVFEEWGGDPYGITLVKREIGSVCADIYEWQPQLLN-WQRLVSGKFDRPLRPKA 756

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L CA GQ IS+IKFASFGTP G CG+ +QG+C++P+S    +K CVG+  C   V    
Sbjct: 757 HLKCAPGQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPEN 816

Query: 122 FGEDPCPNLRKKLSAEVLC 141
           FG DPC N+ KKLS E +C
Sbjct: 817 FGGDPCRNVLKKLSVEAIC 834

[Close]

BLAST of HG10000491 vs. ExPASy TrEMBL
Match: A0A5A7TU13 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001270 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.7e-69
Identity = 129/145 (88.97%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+ ELNEQNVLK
Sbjct: 551 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 610

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGS EQGTC+SPKS SVLQKLCVGRRRCLAT+PTS
Sbjct: 611 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 670

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 671 IFGEDPCPNLRKKLSAEVVCQPVAT 695

[Close]

BLAST of HG10000491 vs. ExPASy TrEMBL
Match: A0A1S3CDQ7 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103499709 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.7e-69
Identity = 129/145 (88.97%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+ ELNEQNVLK
Sbjct: 701 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 760

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGS EQGTC+SPKS SVLQKLCVGRRRCLAT+PTS
Sbjct: 761 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 820

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 821 IFGEDPCPNLRKKLSAEVVCQPVAT 845

[Close]

BLAST of HG10000491 vs. ExPASy TrEMBL
Match: A0A0A0LL95 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_2G249880 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.8e-68
Identity = 128/145 (88.28%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MP+KNLIVVFEEVGGNPS+ISLVKRS+TSICTEAS+YRPV+KN H  QN+GELNEQNVLK
Sbjct: 704 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNNGELNEQNVLK 763

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQFISAIKFASFGTPSGACGS +QGTC+SPKS  VLQKLCVGR+RCLAT+PTS
Sbjct: 764 INLHCAAGQFISAIKFASFGTPSGACGSHKQGTCHSPKSDYVLQKLCVGRQRCLATIPTS 823

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVAT 146
           IFGEDPCPNLRKKLSAEV+CQPVAT
Sbjct: 824 IFGEDPCPNLRKKLSAEVVCQPVAT 848

[Close]

BLAST of HG10000491 vs. ExPASy TrEMBL
Match: A0A6J1CYF4 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.4e-64
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MPSKNLIVVFEE+ GNPS+I+LVKRS+TSIC EASE+RPV+K+ H  QNHGELN+QNV+K
Sbjct: 721 MPSKNLIVVFEEIDGNPSRINLVKRSVTSICAEASEFRPVIKSWHVNQNHGELNQQNVVK 780

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQ ISAIKFASFGTP G+CGSL QGTC+SP S SVLQKLCVGRRRCLATVPTS
Sbjct: 781 INLHCAAGQSISAIKFASFGTPIGSCGSLGQGTCHSPNSQSVLQKLCVGRRRCLATVPTS 840

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVA 145
           IFGEDPCPN+RKKLSAEV+C PVA
Sbjct: 841 IFGEDPCPNVRKKLSAEVVCAPVA 864

[Close]

BLAST of HG10000491 vs. ExPASy TrEMBL
Match: A0A6J1CYR7 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.4e-64
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MPSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 60
           MPSKNLIVVFEE+ GNPS+I+LVKRS+TSIC EASE+RPV+K+ H  QNHGELN+QNV+K
Sbjct: 685 MPSKNLIVVFEEIDGNPSRINLVKRSVTSICAEASEFRPVIKSWHVNQNHGELNQQNVVK 744

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTS 120
           INLHCAAGQ ISAIKFASFGTP G+CGSL QGTC+SP S SVLQKLCVGRRRCLATVPTS
Sbjct: 745 INLHCAAGQSISAIKFASFGTPIGSCGSLGQGTCHSPNSQSVLQKLCVGRRRCLATVPTS 804

Query: 121 IFGEDPCPNLRKKLSAEVLCQPVA 145
           IFGEDPCPN+RKKLSAEV+C PVA
Sbjct: 805 IFGEDPCPNVRKKLSAEVVCAPVA 828

[Close]

BLAST of HG10000491 vs. TAIR 10
Match: AT4G36360.1 (beta-galactosidase 3 )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 71/141 (50.35%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           PS+NL+V+FEE+GGNPS +SLVKRS++ +C E SEY P +KN    +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS +QG C++  S ++L++ CVG+ RC  T+  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLRKKLSAEVLCQP 143
           FG+DPCPN+ K+L+ E +C P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 847

[Close]

BLAST of HG10000491 vs. TAIR 10
Match: AT4G36360.2 (beta-galactosidase 3 )

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-38
Identity = 71/141 (50.35%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           PS+NL+V+FEE+GGNPS +SLVKRS++ +C E SEY P +KN    +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS +QG C++  S ++L++ CVG+ RC  T+  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILER-CVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLRKKLSAEVLCQP 143
           FG+DPCPN+ K+L+ E +C P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 846

[Close]

BLAST of HG10000491 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-32
Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLKI 61
           PS NL+VVFEE GG+P+ I+LV+R + S+C +  E++  + N     + G++N+    K 
Sbjct: 709 PSGNLLVVFEEWGGDPNGITLVRREVDSVCADIYEWQSTLVNYQLHAS-GKVNKPLHPKA 768

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPTSI 121
           +L C  GQ I+ +KFASFGTP G CGS  QG+C++  S     KLCVG+  C  TV   +
Sbjct: 769 HLQCGPGQKITTVKFASFGTPEGTCGSYRQGSCHAHHSYDAFNKLCVGQNWCSVTVAPEM 828

Query: 122 FGEDPCPNLRKKLSAEVLC 141
           FG DPCPN+ KKL+ E +C
Sbjct: 829 FGGDPCPNVMKKLAVEAVC 846

[Close]

BLAST of HG10000491 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 )

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISLVKRSITSICTEASE--YRPVVKNEHTRQNHGELNEQNVL 61
           PS NL+V+FEE GGNP KIS+   +   +C + SE  Y P+ K       +G ++  +V 
Sbjct: 735 PSSNLLVLFEETGGNPFKISVKTVTAGILCGQVSESHYPPLRKWSTPDYINGTMSINSVA 794

Query: 62  -KINLHCAAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVP 121
            +++LHC  G  IS+I+FAS+GTP G+C     G C++  SLS++ + C GR  C   V 
Sbjct: 795 PEVHLHCEDGHVISSIEFASYGTPRGSCDGFSIGKCHASNSLSIVSEACKGRNSCFIEVS 854

Query: 122 TSIFGEDPCPNLRKKLSAEVLCQP 143
            + F  DPC    K L+    C P
Sbjct: 855 NTAFISDPCSGTLKTLAVMSRCSP 878

[Close]

BLAST of HG10000491 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 105.5 bits (262), Expect = 3.6e-23
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 2   PSKNLIVVFEEVGGNPSKISL-VKRSITSICTEASEYRPVVKNEHTRQNHGELNEQNVLK 61
           PS N++V+FEE+GG+P++IS   K++ +++C   S+  P   +  T  +      +    
Sbjct: 712 PSGNILVLFEEMGGDPTQISFATKQTGSNLCLTVSQSHPPPVDTWTSDSKISNRNRTRPV 771

Query: 62  INLHC-AAGQFISAIKFASFGTPSGACGSLEQGTCYSPKSLSVLQKLCVGRRRCLATVPT 121
           ++L C  + Q I +IKFASFGTP G CGS  QG C S +SLS++QK C+G R C   V T
Sbjct: 772 LSLKCPISTQVIFSIKFASFGTPKGTCGSFTQGHCNSSRSLSLVQKACIGLRSCNVEVST 831

Query: 122 SIFGEDPCPNLRKKLSAEVLC 141
            +FGE PC  + K L+ E  C
Sbjct: 832 RVFGE-PCRGVVKSLAVEASC 851

The following BLAST results are available for this feature:

BLAST of HG10000491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901907.1	1.1e-71	93.79	beta-galactosidase 3-like [Benincasa hispida]	[more]
KAA0045616.1	2.0e-68	88.97	beta-galactosidase 5-like [Cucumis melo var. makuwa]	[more]
XP_008460995.1	2.0e-68	88.97	PREDICTED: beta-galactosidase 5-like [Cucumis melo]	[more]
XP_004150073.1	1.0e-67	88.28	beta-galactosidase 5 [Cucumis sativus] >KGN61834.1 hypothetical protein Csa_0061...	[more]
XP_022146136.1	1.9e-63	83.33	beta-galactosidase 3-like isoform X1 [Momordica charantia]	[more]

BLAST of HG10000491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV9	1.7e-38	50.35	Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1	[more]
Q10RB4	6.1e-36	49.65	Beta-galactosidase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0165400 PE...	[more]
Q8W0A1	7.0e-32	47.48	Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE...	[more]
Q9SCW1	4.6e-31	46.04	Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1	[more]
P48980	1.3e-30	48.20	Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1	[more]

BLAST of HG10000491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU13	9.7e-69	88.97	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G0...	[more]
A0A1S3CDQ7	9.7e-69	88.97	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103499709 PE=3 SV=1	[more]
A0A0A0LL95	4.8e-68	88.28	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_2G249880 PE=3 SV=1	[more]
A0A6J1CYF4	9.4e-64	83.33	Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1	[more]
A0A6J1CYR7	9.4e-64	83.33	Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1	[more]

BLAST of HG10000491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36360.1	1.2e-39	50.35	beta-galactosidase 3	[more]
AT4G36360.2	1.8e-38	50.35	beta-galactosidase 3	[more]
AT3G13750.1	3.2e-32	46.04	beta galactosidase 1	[more]
AT2G32810.1	2.1e-23	38.89	beta galactosidase 9	[more]
AT2G28470.1	3.6e-23	41.13	beta-galactosidase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	GENE3D	2.60.120.740		coord: 41..144 e-value: 1.3E-15 score: 59.6
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PFAM	PF02140	Gal_Lectin	coord: 63..140 e-value: 2.2E-17 score: 63.1
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PROSITE	PS50228	SUEL_LECTIN	coord: 60..141 score: 16.47982
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 2..133
None	No IPR available	PANTHER	PTHR23421:SF79	BETA-GALACTOSIDASE 3	coord: 2..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000491.1	HG10000491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005773	vacuole
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds