HG10000422 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000422
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr09: 5031181 .. 5032368 (-)
RNA-Seq Expression	HG10000422
Synteny	HG10000422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGATCTCCCCTTCTCCTTCCCCTTCCGCCGCCCTCAATTTCCCTCCCCCCTCCTCCTTACAGCCGGCGAAGCTCCCTGTCGACTTCAGTCCCCCTTTAATCGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGTCTCATCTCCCGCCATCTCATCCCTCCCATTCTCCACCTCCTCCGTCTCCACCGCCGTCGCTGGCGTCGCTGGCGCCGCCGACGTCGACGCGCCCGATCTTACCTCCCATCCTCCTCTGGCGGCGACCTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTTCAGATGGCTTCCATGTTTTCTCTCCGTACGGTCTCGACGAATCCGTAATCAAGACGATTCCACTCTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGATGATTACGTCAGAACGCTTCCGATTTGTTCTCACGCGTTTCACGTTGATTGTATAGATGTATGGCTTAGGTCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCGGAATCTCCGTTCACGCCGGTTATGGCGGCTAGAATCCGGCCAAGTCTTGATGATACGATCTTACGGAGCATCGTATTAGAACCGCTCGTGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCGACGGAATCGGAAATTACTCCTTGCGTTGATGAACCACGGAATAGCAATTCCGTTGAGGATCAAATGAACGGACGAGATTTCTTGTTGAAGCGATCGTATTCATTCGGATTCGAACGGAACTTAGCGTCGGAGAGAATGATTTTGGAACCAGCGACGACGTCTCCATGGAGATACCGTCGTGGAAGCTTCTGGAGCAAACGTCCATCGCCGTTCGGATCTCTACCGAAGGCGAGAGTGTTTTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGAAGAGGAGGATTTTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCGTCTAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCGGTAACCGGCGGTGGAGCAGCAGCGTTCTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAACCGAAGATGA

mRNA sequence

ATGCCGATCTCCCCTTCTCCTTCCCCTTCCGCCGCCCTCAATTTCCCTCCCCCCTCCTCCTTACAGCCGGCGAAGCTCCCTGTCGACTTCAGTCCCCCTTTAATCGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGTCTCATCTCCCGCCATCTCATCCCTCCCATTCTCCACCTCCTCCGTCTCCACCGCCGTCGCTGGCGTCGCTGGCGCCGCCGACGTCGACGCGCCCGATCTTACCTCCCATCCTCCTCTGGCGGCGACCTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTTCAGATGGCTTCCATGTTTTCTCTCCGTACGGTCTCGACGAATCCGTAATCAAGACGATTCCACTCTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGATGATTACGTCAGAACGCTTCCGATTTGTTCTCACGCGTTTCACGTTGATTGTATAGATGTATGGCTTAGGTCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCGGAATCTCCGTTCACGCCGGTTATGGCGGCTAGAATCCGGCCAAGTCTTGATGATACGATCTTACGGAGCATCGTATTAGAACCGCTCGTGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCGACGGAATCGGAAATTACTCCTTGCGTTGATGAACCACGGAATAGCAATTCCGTTGAGGATCAAATGAACGGACGAGATTTCTTGTTGAAGCGATCGTATTCATTCGGATTCGAACGGAACTTAGCGTCGGAGAGAATGATTTTGGAACCAGCGACGACGTCTCCATGGAGATACCGTCGTGGAAGCTTCTGGAGCAAACGTCCATCGCCGTTCGGATCTCTACCGAAGGCGAGAGTGTTTTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGAAGAGGAGGATTTTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCGTCTAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCGGTAACCGGCGGTGGAGCAGCAGCGTTCTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAACCGAAGATGA

Coding sequence (CDS)

ATGCCGATCTCCCCTTCTCCTTCCCCTTCCGCCGCCCTCAATTTCCCTCCCCCCTCCTCCTTACAGCCGGCGAAGCTCCCTGTCGACTTCAGTCCCCCTTTAATCGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGTCTCATCTCCCGCCATCTCATCCCTCCCATTCTCCACCTCCTCCGTCTCCACCGCCGTCGCTGGCGTCGCTGGCGCCGCCGACGTCGACGCGCCCGATCTTACCTCCCATCCTCCTCTGGCGGCGACCTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTTCAGATGGCTTCCATGTTTTCTCTCCGTACGGTCTCGACGAATCCGTAATCAAGACGATTCCACTCTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGATGATTACGTCAGAACGCTTCCGATTTGTTCTCACGCGTTTCACGTTGATTGTATAGATGTATGGCTTAGGTCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCGGAATCTCCGTTCACGCCGGTTATGGCGGCTAGAATCCGGCCAAGTCTTGATGATACGATCTTACGGAGCATCGTATTAGAACCGCTCGTGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCGACGGAATCGGAAATTACTCCTTGCGTTGATGAACCACGGAATAGCAATTCCGTTGAGGATCAAATGAACGGACGAGATTTCTTGTTGAAGCGATCGTATTCATTCGGATTCGAACGGAACTTAGCGTCGGAGAGAATGATTTTGGAACCAGCGACGACGTCTCCATGGAGATACCGTCGTGGAAGCTTCTGGAGCAAACGTCCATCGCCGTTCGGATCTCTACCGAAGGCGAGAGTGTTTTCGTTCCGATACTACAGAGGAATGAAGTCGCCGTTCTTCAGACGAAGAGGAGGATTTTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCGTCTAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCGGTAACCGGCGGTGGAGCAGCAGCGTTCTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAACCGAAGATGA

Protein sequence

MPISPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR

Homology

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BLAST of HG10000422 vs. NCBI nr
Match: XP_038902895.1 (RING-H2 finger protein ATL65 [Benincasa hispida])

HSP 1 Score: 760.4 bits (1962), Expect = 7.8e-216
Identity = 384/402 (95.52%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1   MPISPSPSPS-------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 60
           MP +PSPSPS       +A NFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL
Sbjct: 1   MPTAPSPSPSPSPSTAASAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 60

Query: 61  ISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHV 120
           ISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEP+DGFHV
Sbjct: 61  ISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPTDGFHV 120

Query: 121 FSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 180
           FSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL
Sbjct: 121 FSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 180

Query: 181 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHATE 240
           RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEG IPNRDSYHATE
Sbjct: 181 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGTIPNRDSYHATE 240

Query: 241 SEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRRGS 300
           SEITPCVDEPRNSNSV+DQ+NGRDFLLKRSYSFGFER+LASERMILEPATTSPWRYRRGS
Sbjct: 241 SEITPCVDEPRNSNSVDDQINGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGS 300

Query: 301 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 360
           FW KRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK
Sbjct: 301 FWMKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 360

Query: 361 SMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           SMTSPMFLRSSVTGGGAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 SMTSPMFLRSSVTGGGAATFSSSRLRCGDPEALLSPERFNRR 402

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BLAST of HG10000422 vs. NCBI nr
Match: XP_016902377.1 (PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo])

HSP 1 Score: 742.3 bits (1915), Expect = 2.2e-210
Identity = 384/409 (93.89%), Postives = 389/409 (95.11%), Query Frame = 0


Query: 1   MPISPSPSPS--------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSR 60
           MP SPSPSPS        AA NFPPPSSLQ AKLPVDFSPPLIAMVVVIATAFLIVTYSR
Sbjct: 1   MPTSPSPSPSLSPSTSAAAAANFPPPSSLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSR 60

Query: 61  LISRHLIPPILHLLRLHRRRWRRWRRRRRR-ARSYLPSSSGGDLDSLPYDSPFFEP-SDG 120
           LISRHL+PPILHLLRLHRRRWRRWRRRRRR ARSY+PSSSGGDLDSLPYDSPFFEP +D 
Sbjct: 61  LISRHLVPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDLDSLPYDSPFFEPTTDA 120

Query: 121 FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 180
           FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID
Sbjct: 121 FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 180

Query: 181 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGP-IPNRDSY 240
           VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL EGP IPNRDSY
Sbjct: 181 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDSY 240

Query: 241 HATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRY 300
           HATESEITPC+DEPRNSNSVEDQMNGRDFLLKRSYSFGFER+LASERMILEPATTSPWRY
Sbjct: 241 HATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRY 300

Query: 301 RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 360
           RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS
Sbjct: 301 RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 360

Query: 361 RRSKSMTSPMFLRSSVT---GGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           RRSKSMTSPMFLRSSVT   GGG AAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 RRSKSMTSPMFLRSSVTGGGGGGGAAFSSSRLRCGDPEALLSPERFNRR 409

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BLAST of HG10000422 vs. NCBI nr
Match: XP_004145402.3 (RING-H2 finger protein ATL65 [Cucumis sativus] >KAE8651863.1 hypothetical protein Csa_006528 [Cucumis sativus])

HSP 1 Score: 741.1 bits (1912), Expect = 4.9e-210
Identity = 383/406 (94.33%), Postives = 388/406 (95.57%), Query Frame = 0


Query: 4   SPSPSPS----------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 63
           SPSPSPS          AA NFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL
Sbjct: 16  SPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRL 75

Query: 64  ISRHLIPPILHLLRLHRRRWRRWRRRRR-RARSYLPSSSGGDLDSLPYDSPFFEP-SDGF 123
           ISRHLIPPILHLLRLHRRRWRRWRRRRR  ARSY+PSSSGGDLDSLPYDSPFFEP +D F
Sbjct: 76  ISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAF 135

Query: 124 HVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 183
           HVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV
Sbjct: 136 HVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 195

Query: 184 WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEG-PIPNRDSYH 243
           WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSI+LEPL EG PIPNRDSYH
Sbjct: 196 WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEGPPIPNRDSYH 255

Query: 244 ATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYR 303
           ATESEITPC+DEPRNSNSVEDQMNGRDFLLKRSYSFGFER+LASERMILEPATTSPWRYR
Sbjct: 256 ATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYR 315

Query: 304 RGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 363
           RGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR
Sbjct: 316 RGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 375

Query: 364 RSKSMTSPMFLRSSVT-GGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           RSKSMTSPMFLRSSVT GGGAAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 376 RSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 421

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BLAST of HG10000422 vs. NCBI nr
Match: XP_023511773.1 (RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 735.7 bits (1898), Expect = 2.1e-208
Identity = 374/403 (92.80%), Postives = 383/403 (95.04%), Query Frame = 0


Query: 4   SPSPSPS-------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISR 63
           SPSPSPS       AA+NFPPPSSL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLISR
Sbjct: 12  SPSPSPSTSSSSYAAAVNFPPPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISR 71

Query: 64  HLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSP 123
           H+IPPIL L+R HRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE +DG+HVFSP
Sbjct: 72  HVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGYHVFSP 131

Query: 124 YGLDESVIKTIPLSVYTAK----SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVW 183
           YGLDES+IKTIPLSVYTAK    SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVW
Sbjct: 132 YGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVW 191

Query: 184 LRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHAT 243
           LRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTIL+SIVLEPL EGPIPNRDSYHAT
Sbjct: 192 LRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGPIPNRDSYHAT 251

Query: 244 ESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRRG 303
           ESEITPCVDEPRNSNS+EDQMNGRDFLLKRSYSFGFER+LASERMILEPAT SPWRYRRG
Sbjct: 252 ESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRG 311

Query: 304 SFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRS 363
           SFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRS
Sbjct: 312 SFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRS 371

Query: 364 KSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           KSMTSPMFLRSSVT GGAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 372 KSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414

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BLAST of HG10000422 vs. NCBI nr
Match: XP_022943929.1 (RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 732.6 bits (1890), Expect = 1.7e-207
Identity = 373/402 (92.79%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 4   SPSPSPS------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH 63
           SPSPSPS      AA+NFP PSSL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH
Sbjct: 12  SPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH 71

Query: 64  LIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPY 123
           +IPPIL L+R HRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE +DGFHVFSPY
Sbjct: 72  VIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPY 131

Query: 124 GLDESVIKTIPLSVYTAK----SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 183
           GLDES+IKTIPLSVYTAK    SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL
Sbjct: 132 GLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 191

Query: 184 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHATE 243
           RSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL+SIVLEPL EGPIPNRDSYHATE
Sbjct: 192 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATE 251

Query: 244 SEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRRGS 303
           SEITPCVDEPRNSNS+EDQMNGRDFLLKRSYSFGFER+LASERMILEPAT SPWRYRRGS
Sbjct: 252 SEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGS 311

Query: 304 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 363
           FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK
Sbjct: 312 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 371

Query: 364 SMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           SMTSPMFLRSSVT GGAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 372 SMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of HG10000422 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 340.1 bits (871), Expect = 3.3e-92
Identity = 223/424 (52.59%), Postives = 273/424 (64.39%), Query Frame = 0


Query: 4   SPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPIL 63
           SPSPSPS+ ++    S  + +  P++FSPPLIAMVVV+A AFL VTYSRLISR  + P+ 
Sbjct: 14  SPSPSPSSGISEEILS--RSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF 73

Query: 64  HLLRLHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPFFEPSDGFHV--FSPY 123
                  RR+RRWR RRRR    + +   S+S  DL S    SPF  P D FH   +SPY
Sbjct: 74  -------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF--PFDSFHYSSYSPY 133

Query: 124 GLDESVIKTIPLSVY-------------TAKSRDRECAVCLLEFEDDDYVRTLPICSHAF 183
           GLD+SVIKT+PL +Y             T+ +  R+CAVCLLEFE+ DYVRTLP+C HAF
Sbjct: 134 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 193

Query: 184 HVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL 243
           H++CID WLRSH NCPLCR      A V  P SPF P+MA RIRPSLDD    +I++   
Sbjct: 194 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRGE 253

Query: 244 VEGPIPNRDSYHATESEITPCVDEPRNSNSVEDQMN---GRDFLLKRSYSFGFERNLASE 303
           +    P+R +++   ++ T   ++     SVE+Q +    R   LKRSYSF  ER   SE
Sbjct: 254 I---TPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRELKRSYSFECERESESE 313

Query: 304 RMILEPATTSPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRGMKSPFFRRR---GGFF 363
           R+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR  KSPFFRRR   G F+
Sbjct: 314 RVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFY 373

Query: 364 PLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPER 396
           P+SE          G SSRR+KSMTSPMF R+       A  SSSRLRCGDPEALLSPER
Sbjct: 374 PISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSSSRLRCGDPEALLSPER 404

[Close]

BLAST of HG10000422 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 5.4e-18
Identity = 67/181 (37.02%), Postives = 99/181 (54.70%), Query Frame = 0


Query: 15  FPPPSSL----QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHR 74
           FPPP S     +      DFSP LIA++ ++A+AF++V+Y  LIS++           HR
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKY----------CHR 96

Query: 75  RRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPYGLDESVIKTIPLS 134
           RR          A + + S       +   ++    P+         GLDES+IK+I  +
Sbjct: 97  RR-HNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSI--T 156

Query: 135 VYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAV 187
           VY  +  D      +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCRA 
Sbjct: 157 VYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAF 204

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BLAST of HG10000422 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-17
Identity = 70/199 (35.18%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 3   ISPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPI 62
           I P P PS  L+    SS         FSP LIA++ ++ +A ++V+Y  LIS++     
Sbjct: 33  IFPPPPPSFFLDDDSSSSSS------SFSPLLIALIGILTSALILVSYYTLISKY----- 92

Query: 63  LHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPYGLDES 122
                 HR                   +S  +  +L ++   F  S      +  GL+ES
Sbjct: 93  -----CHRHH----------------QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 152

Query: 123 VIKTIPLSVYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHA 182
           +IK+I  +VY  KS D      +C+VCL EFE+++ +R LP C+HAFH+ CID WL+SH+
Sbjct: 153 MIKSI--TVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 197

Query: 183 NCPLCRAVVFRPESPFTPV 197
           NCPLCRA V    +P   V
Sbjct: 213 NCPLCRAFVTGVNNPTASV 197

[Close]

BLAST of HG10000422 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-16
Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0


Query: 1   MPISPSPSPSAALNFPPPSS----LQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISR 60
           M +S   +P   L+FPPP       + +     F    +A++ ++ATAFL+V+Y   + +
Sbjct: 1   MDLSNRRNPLRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIK 60

Query: 61  HLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSP 120
             +                W R     R  L      D D L   SP             
Sbjct: 61  CCL---------------NWHRIDILGRFSLSRRRRNDQDPLMVYSPELRSR-------- 120

Query: 121 YGLDESVIKTIPL-----------SVYTA------KSRDRECAVCLLEFEDDDYVRTLPI 180
            GLDESVI+ IP+            V+T       + R +EC+VCL EF+D++ +R +P 
Sbjct: 121 -GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 180

Query: 181 CSHAFHVDCIDVWLRSHANCPLCRAVV 187
           CSH FH+DCIDVWL+++ANCPLCR  V
Sbjct: 181 CSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of HG10000422 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.9e-16
Identity = 70/231 (30.30%), Postives = 107/231 (46.32%), Query Frame = 0


Query: 3   ISPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPI 62
           + P P P  +  F  P   + +    +F    IA++ ++ATAFL+V+Y   + +  +   
Sbjct: 14  VFPPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCL--- 73

Query: 63  LHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPY----G 122
                     W +    RRR RS                       +   ++SP+    G
Sbjct: 74  ---------NWHQIDIFRRRRRS--------------------SDQNPLMIYSPHEVNRG 133

Query: 123 LDESVIKTIPLSVYTAKSRD------------RECAVCLLEFEDDDYVRTLPICSHAFHV 182
           LDES I+ IP  V+  K RD            +EC+VCL EF++D+ +R +P C H FH+
Sbjct: 134 LDESAIRAIP--VFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHI 193

Query: 183 DCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEP 218
           DCID+WL+ +ANCPLCR  V    S    +++A   P  +    R+  LEP
Sbjct: 194 DCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEP 210

[Close]

BLAST of HG10000422 vs. ExPASy TrEMBL
Match: A0A1S4E2C5 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.1e-210
Identity = 384/409 (93.89%), Postives = 389/409 (95.11%), Query Frame = 0


Query: 1   MPISPSPSPS--------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSR 60
           MP SPSPSPS        AA NFPPPSSLQ AKLPVDFSPPLIAMVVVIATAFLIVTYSR
Sbjct: 1   MPTSPSPSPSLSPSTSAAAAANFPPPSSLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSR 60

Query: 61  LISRHLIPPILHLLRLHRRRWRRWRRRRRR-ARSYLPSSSGGDLDSLPYDSPFFEP-SDG 120
           LISRHL+PPILHLLRLHRRRWRRWRRRRRR ARSY+PSSSGGDLDSLPYDSPFFEP +D 
Sbjct: 61  LISRHLVPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDLDSLPYDSPFFEPTTDA 120

Query: 121 FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 180
           FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID
Sbjct: 121 FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 180

Query: 181 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGP-IPNRDSY 240
           VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL EGP IPNRDSY
Sbjct: 181 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDSY 240

Query: 241 HATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRY 300
           HATESEITPC+DEPRNSNSVEDQMNGRDFLLKRSYSFGFER+LASERMILEPATTSPWRY
Sbjct: 241 HATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRY 300

Query: 301 RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 360
           RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS
Sbjct: 301 RRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSS 360

Query: 361 RRSKSMTSPMFLRSSVT---GGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           RRSKSMTSPMFLRSSVT   GGG AAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 RRSKSMTSPMFLRSSVTGGGGGGGAAFSSSRLRCGDPEALLSPERFNRR 409

[Close]

BLAST of HG10000422 vs. ExPASy TrEMBL
Match: A0A0A0LIL3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.8e-210
Identity = 385/417 (92.33%), Postives = 390/417 (93.53%), Query Frame = 0


Query: 1   MPISPSPSPS------------------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIA 60
           MP SPSPSPS                  AA NFPPPSSLQPAKLPVDFSPPLIAMVVVIA
Sbjct: 1   MPTSPSPSPSPSPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIA 60

Query: 61  TAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRR-RARSYLPSSSGGDLDSLPYD 120
           TAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRR  ARSY+PSSSGGDLDSLPYD
Sbjct: 61  TAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYD 120

Query: 121 SPFFEP-SDGFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPIC 180
           SPFFEP +D FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPIC
Sbjct: 121 SPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPIC 180

Query: 181 SHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVE 240
           SHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSI+LEPL E
Sbjct: 181 SHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAE 240

Query: 241 G-PIPNRDSYHATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMIL 300
           G PIPNRDSYHATESEITPC+DEPRNSNSVEDQMNGRDFLLKRSYSFGFER+LASERMIL
Sbjct: 241 GPPIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMIL 300

Query: 301 EPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWR 360
           EPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWR
Sbjct: 301 EPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWR 360

Query: 361 FSNGVGGGSSRRSKSMTSPMFLRSSVT-GGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           FSNGVGGGSSRRSKSMTSPMFLRSSVT GGGAAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 FSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of HG10000422 vs. ExPASy TrEMBL
Match: A0A6J1FVL7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502 PE=3 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.5e-208
Identity = 373/402 (92.79%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 4   SPSPSPS------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH 63
           SPSPSPS      AA+NFP PSSL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH
Sbjct: 12  SPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH 71

Query: 64  LIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPY 123
           +IPPIL L+R HRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE +DGFHVFSPY
Sbjct: 72  VIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPY 131

Query: 124 GLDESVIKTIPLSVYTAK----SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 183
           GLDES+IKTIPLSVYTAK    SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL
Sbjct: 132 GLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWL 191

Query: 184 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHATE 243
           RSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL+SIVLEPL EGPIPNRDSYHATE
Sbjct: 192 RSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATE 251

Query: 244 SEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRRGS 303
           SEITPCVDEPRNSNS+EDQMNGRDFLLKRSYSFGFER+LASERMILEPAT SPWRYRRGS
Sbjct: 252 SEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGS 311

Query: 304 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 363
           FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK
Sbjct: 312 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 371

Query: 364 SMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           SMTSPMFLRSSVT GGAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 372 SMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of HG10000422 vs. ExPASy TrEMBL
Match: A0A6J1JBG1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 PE=3 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.5e-207
Identity = 374/404 (92.57%), Postives = 383/404 (94.80%), Query Frame = 0


Query: 4   SPSPSPS--------AALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 63
           SPSPSPS        AA+NFPPPSSL PAKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS
Sbjct: 10  SPSPSPSTSSSSSSAAAVNFPPPSSLLPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 69

Query: 64  RHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFS 123
           RH+IPPIL L+R HRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE +DGFHVFS
Sbjct: 70  RHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVFS 129

Query: 124 PYGLDESVIKTIPLSVYTAK----SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 183
           PYGLDES+IKTIPLSVYTAK    SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV
Sbjct: 130 PYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 189

Query: 184 WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGPIPNRDSYHA 243
           WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTIL+SIVLEPL EGPIPNRDSY+A
Sbjct: 190 WLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGPIPNRDSYNA 249

Query: 244 TESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLASERMILEPATTSPWRYRR 303
           TESEITP VDEPRNSNS+EDQMNGRDFLLKRSYSFGFER+LASERMILEPAT SPWRYRR
Sbjct: 250 TESEITPYVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRR 309

Query: 304 GSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRR 363
           GSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRR
Sbjct: 310 GSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRR 369

Query: 364 SKSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPERFNRR 396
           SKSMTSPMFLRSSVT GGAA FSSSRLRCGDPEALLSPERFNRR
Sbjct: 370 SKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of HG10000422 vs. ExPASy TrEMBL
Match: A0A5A7TSC8 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005120 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.4e-196
Identity = 352/364 (96.70%), Postives = 356/364 (97.80%), Query Frame = 0


Query: 37  MVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRR-ARSYLPSSSGGDL 96
           MVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRR ARSY+PSSSGGDL
Sbjct: 1   MVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDL 60

Query: 97  DSLPYDSPFFEP-SDGFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYV 156
           DSLPYDSPFFEP +D FHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYV
Sbjct: 61  DSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYV 120

Query: 157 RTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIV 216
           RTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIV
Sbjct: 121 RTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIV 180

Query: 217 LEPLVEGP-IPNRDSYHATESEITPCVDEPRNSNSVEDQMNGRDFLLKRSYSFGFERNLA 276
           LEPL EGP IPNRDSYHATESEITPC+DEPRNSNSVEDQMNGRDFLLKRSYSFGFER+LA
Sbjct: 181 LEPLAEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLA 240

Query: 277 SERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPL 336
           SERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPL
Sbjct: 241 SERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPL 300

Query: 337 SESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVT--GGGAAAFSSSRLRCGDPEALLSPER 396
           SESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVT  GGG AAFSSSRLRCGDPEALLSPER
Sbjct: 301 SESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGGGAAFSSSRLRCGDPEALLSPER 360

[Close]

BLAST of HG10000422 vs. TAIR 10
Match: AT3G18930.1 (RING/U-box superfamily protein )

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-93
Identity = 223/424 (52.59%), Postives = 273/424 (64.39%), Query Frame = 0


Query: 4   SPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPIL 63
           SPSPSPS+ ++    S  + +  P++FSPPLIAMVVV+A AFL VTYSRLISR  + P+ 
Sbjct: 14  SPSPSPSSGISEEILS--RSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF 73

Query: 64  HLLRLHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPFFEPSDGFHV--FSPY 123
                  RR+RRWR RRRR    + +   S+S  DL S    SPF  P D FH   +SPY
Sbjct: 74  -------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF--PFDSFHYSSYSPY 133

Query: 124 GLDESVIKTIPLSVY-------------TAKSRDRECAVCLLEFEDDDYVRTLPICSHAF 183
           GLD+SVIKT+PL +Y             T+ +  R+CAVCLLEFE+ DYVRTLP+C HAF
Sbjct: 134 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 193

Query: 184 HVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL 243
           H++CID WLRSH NCPLCR      A V  P SPF P+MA RIRPSLDD    +I++   
Sbjct: 194 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRGE 253

Query: 244 VEGPIPNRDSYHATESEITPCVDEPRNSNSVEDQMN---GRDFLLKRSYSFGFERNLASE 303
           +    P+R +++   ++ T   ++     SVE+Q +    R   LKRSYSF  ER   SE
Sbjct: 254 I---TPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRELKRSYSFECERESESE 313

Query: 304 RMILEPATTSPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRGMKSPFFRRR---GGFF 363
           R+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR  KSPFFRRR   G F+
Sbjct: 314 RVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFY 373

Query: 364 PLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPER 396
           P+SE          G SSRR+KSMTSPMF R+       A  SSSRLRCGDPEALLSPER
Sbjct: 374 PISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSSSRLRCGDPEALLSPER 404

[Close]

BLAST of HG10000422 vs. TAIR 10
Match: AT3G18930.2 (RING/U-box superfamily protein )

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-93
Identity = 223/424 (52.59%), Postives = 273/424 (64.39%), Query Frame = 0


Query: 4   SPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPIL 63
           SPSPSPS+ ++    S  + +  P++FSPPLIAMVVV+A AFL VTYSRLISR  + P+ 
Sbjct: 14  SPSPSPSSGISEEILS--RSSDPPLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLF 73

Query: 64  HLLRLHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPFFEPSDGFHV--FSPY 123
                  RR+RRWR RRRR    + +   S+S  DL S    SPF  P D FH   +SPY
Sbjct: 74  -------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF--PFDSFHYSSYSPY 133

Query: 124 GLDESVIKTIPLSVY-------------TAKSRDRECAVCLLEFEDDDYVRTLPICSHAF 183
           GLD+SVIKT+PL +Y             T+ +  R+CAVCLLEFE+ DYVRTLP+C HAF
Sbjct: 134 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 193

Query: 184 HVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL 243
           H++CID WLRSH NCPLCR      A V  P SPF P+MA RIRPSLDD    +I++   
Sbjct: 194 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRGE 253

Query: 244 VEGPIPNRDSYHATESEITPCVDEPRNSNSVEDQMN---GRDFLLKRSYSFGFERNLASE 303
           +    P+R +++   ++ T   ++     SVE+Q +    R   LKRSYSF  ER   SE
Sbjct: 254 I---TPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRELKRSYSFECERESESE 313

Query: 304 RMILEPATTSPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRGMKSPFFRRR---GGFF 363
           R+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR  KSPFFRRR   G F+
Sbjct: 314 RVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRSTKSPFFRRRSSAGVFY 373

Query: 364 PLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGAAAFSSSRLRCGDPEALLSPER 396
           P+SE          G SSRR+KSMTSPMF R+       A  SSSRLRCGDPEALLSPER
Sbjct: 374 PISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSSSRLRCGDPEALLSPER 404

[Close]

BLAST of HG10000422 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-19
Identity = 67/181 (37.02%), Postives = 99/181 (54.70%), Query Frame = 0


Query: 15  FPPPSSL----QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHR 74
           FPPP S     +      DFSP LIA++ ++A+AF++V+Y  LIS++           HR
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKY----------CHR 96

Query: 75  RRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPYGLDESVIKTIPLS 134
           RR          A + + S       +   ++    P+         GLDES+IK+I  +
Sbjct: 97  RR-HNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSI--T 156

Query: 135 VYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAV 187
           VY  +  D      +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCRA 
Sbjct: 157 VYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAF 204

[Close]

BLAST of HG10000422 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-18
Identity = 70/199 (35.18%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 3   ISPSPSPSAALNFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPI 62
           I P P PS  L+    SS         FSP LIA++ ++ +A ++V+Y  LIS++     
Sbjct: 33  IFPPPPPSFFLDDDSSSSSS------SFSPLLIALIGILTSALILVSYYTLISKY----- 92

Query: 63  LHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSPYGLDES 122
                 HR                   +S  +  +L ++   F  S      +  GL+ES
Sbjct: 93  -----CHRHH----------------QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 152

Query: 123 VIKTIPLSVYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHA 182
           +IK+I  +VY  KS D      +C+VCL EFE+++ +R LP C+HAFH+ CID WL+SH+
Sbjct: 153 MIKSI--TVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 197

Query: 183 NCPLCRAVVFRPESPFTPV 197
           NCPLCRA V    +P   V
Sbjct: 213 NCPLCRAFVTGVNNPTASV 197

[Close]

BLAST of HG10000422 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-17
Identity = 68/207 (32.85%), Postives = 98/207 (47.34%), Query Frame = 0


Query: 1   MPISPSPSPSAALNFPPPSS----LQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISR 60
           M +S   +P   L+FPPP       + +     F    +A++ ++ATAFL+V+Y   + +
Sbjct: 1   MDLSNRRNPLRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIK 60

Query: 61  HLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPSDGFHVFSP 120
             +                W R     R  L      D D L   SP             
Sbjct: 61  CCL---------------NWHRIDILGRFSLSRRRRNDQDPLMVYSPELRSR-------- 120

Query: 121 YGLDESVIKTIPL-----------SVYTA------KSRDRECAVCLLEFEDDDYVRTLPI 180
            GLDESVI+ IP+            V+T       + R +EC+VCL EF+D++ +R +P 
Sbjct: 121 -GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 180

Query: 181 CSHAFHVDCIDVWLRSHANCPLCRAVV 187
           CSH FH+DCIDVWL+++ANCPLCR  V
Sbjct: 181 CSHLFHIDCIDVWLQNNANCPLCRTRV 183

The following BLAST results are available for this feature:

BLAST of HG10000422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902895.1	7.8e-216	95.52	RING-H2 finger protein ATL65 [Benincasa hispida]	[more]
XP_016902377.1	2.2e-210	93.89	PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo]	[more]
XP_004145402.3	4.9e-210	94.33	RING-H2 finger protein ATL65 [Cucumis sativus] >KAE8651863.1 hypothetical protei...	[more]
XP_023511773.1	2.1e-208	92.80	RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo]	[more]
XP_022943929.1	1.7e-207	92.79	RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger p...	[more]

BLAST of HG10000422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YI6	3.3e-92	52.59	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
Q9SRQ8	5.4e-18	37.02	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	1.6e-17	35.18	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	2.3e-16	32.85	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.9e-16	30.30	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]

BLAST of HG10000422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2C5	1.1e-210	93.89	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 ...	[more]
A0A0A0LIL3	1.8e-210	92.33	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE...	[more]
A0A6J1FVL7	8.5e-208	92.79	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502...	[more]
A0A6J1JBG1	2.5e-207	92.57	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 P...	[more]
A0A5A7TSC8	7.4e-196	96.70	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of HG10000422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18930.1	2.4e-93	52.59	RING/U-box superfamily protein	[more]
AT3G18930.2	2.4e-93	52.59	RING/U-box superfamily protein	[more]
AT3G03550.1	3.8e-19	37.02	RING/U-box superfamily protein	[more]
AT5G17600.1	1.1e-18	35.18	RING/U-box superfamily protein	[more]
AT5G43420.1	1.6e-17	32.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 141..182 e-value: 1.5E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 140..183 e-value: 1.9E-13 score: 50.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 141..183 score: 12.208971
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 112..187 e-value: 3.0E-20 score: 73.7
None	No IPR available	PANTHER	PTHR45676:SF74	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 7..366
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 140..183 e-value: 1.029E-19 score: 79.6533
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 137..189
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 7..366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000422.1	HG10000422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding