HG10000335 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTGTCAAAGCCAAATTAGCCAAAAGCAATGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTCTGCCCCTGATTGTCTTTGTCTATCTCTGTTCCTCTCGTGATATCTATTAGAAAATCATTCTTGATTACTTTAAGATGTTCTCTCTCTCTCTCTCTCTCTCTAAAAAATGTAACAATACTTCACTGTGTCTCTTCAGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGGTATTTTATTACCACCTTGTGGTTGCTCTTTCATTACTTGATATTTTAAATGCTAATTGCTAACAATGACAGGTTTTAAATTTTACTGCTGCTTGCATAGTGTGATTGCTGGAGTTGTTTTGTTTTGTTTTTGGTTTTTTAAATTAAAAACTAGTACTAAGAATTGGGCATATATAGTGTTTAGAAGTTTAGGTTAACAGCCCACTGCTCACCTGGTATATTAAAATCCTCACAATGACTATAATAATTTAATAAAAATTTATCAACAACTATAATAACATGAGACGTTTGGGATGAAAATAGGATTCAAGTCAAAGCTGTCAAAAAGCAGAATTTTGAAGATAATAGTGCTTCTATTCTTTTGAAATATTACACTGTCAAAATCAGGAAAATTATTGATGAATGGAATCTAAAAAACAACAGTAAATTTGCTAAGGGGAAGAATGCAGAAAATCCTCGTAAATATACTTTCAGAAAATCAGCAAACTTAGACTAAATCTCTATTGGAAATGAGACAGTGGAGGAAAAGTGACATAAACATGAAAAAGGTTGGGTATGATAAAGTGGGAAGTAAAGCAGGTTGGGTCAGAAATTGAGAAAGGTGAAGAGGGTGCATCATCAATACATCTTTCTTTCTTCATGGGATTGAGGCAAGGGGATTCAGTTACCCCTTTTCTTTACTATGAGGTTCAACCTAGGGAGGGGTGGAGTCTTGACAATATTATCCTATGAATACCAGCCATTTTTAAGATTAGTTTACTGTTTAAGGAGGATTCTCTCGTCCTTGATTATCTTTCCACAGATTTCGATGCGTGCCTACCCATTCAAAGGGATGGAGATTGTGTTTACTCAAAATAGTCCTATGTCATAAGGATTCAAGCTCGAGGGCAAAACGCCAAAGCCATTTCGCCAATAGAGCTTTGTTGCATAACCTTAAATTACCAATCTCAAGCACCTCTTCCCTCCCTCCCTCCCTTCCATTCACAAAATTCCCCACGACTTTTCAGCAAACTAGATGAGAACCATTCCCTTCTTCCACCCTTTCCCAAAGGAAGTCTCTCATGAGCTTCTCCTTGCTTTTACAAACCACAAAACAGGCGCTTGAAAAAGAGAGAGGTTAGATAGGAATTCCACTCAACACAAATCTGATCAAAGTAAGTCTACTAGCTTTAGAGAAAAAAGTTCTCTTCCACGAGGCTAACGTTTTCTGAATCTTCTCAATGAGACCATTCTAGAAAGAGATATCTCTTGGGTTACCTCCGAGAGGAAGACCCAGGTAGGAGGAAGGGAAAGAGCCAACCTCACAGCCCATCTAAGCTTCATCGAATCACAATTTAACCCCAAAATCTGACATTTACTCTGGTTAATTTTAAGCCTCGACATTGTCTCAAAGAACCTTAAAATGTGATTTAGAATAAGGAAGGACTCCTCTTTGCCAAAACTAAAGAACATTGTATGGTTAGCAAATTGCAGATGAGACAATGCAACCTCCTTAAAACCAACCTTAAAAGACTCAAGAATGCTTTCTTCCACTCCGCTAATAACATATGGCTCAGAACATCCACAACCCATATTACATTATTGCAATTATCAGCCAACTTTGTGGCCGATGTTTACCAGAAGAATTACCAATCCTACACAAACATTTTATGTTACTACTACTTGAGAGTCCAAGATTTCATCTTATTTACTACGAGTATGACTATATAAGTACCGACTTATTACTTGTTTAATAGTTAAATTATGAGAATCGAGACTAGTGATCTAATTTTCACAAATCTTTGCATTTTAAACTTTTCAGTTAATGTTGTAAATTGGATTTGGAATCATTTTTAATCTTACTTGCTTTTATTAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGGTATGTATTTACAGAATAGTCCACCCTATATTAATATGTGTTGCATACTTTGTTCTTTGTACATTTATTTGATTTTATTTACATGTAGATGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGTAACAATTCCACTATGATTCGGGCTGGTTTAAGCAATTGATTATTTATATTAGGAGGTGTAAGCAATTGATTCGGGCTGGTTTCTTGCTGAAACCAATTTTTTTCCAAACTGACCAACTCACTATTTTTTTTTATTTGACTGGATTAATCGGCTATTGTACTTCAAAAGAGCCAAACTATTAATTAAGACGTATGTTCCTTGCTTGCACCCTGCCAACCCCCTTCATATTTATTAAGACATTTATCCTTGTACCACCTTACCTATAGTCGGCTTCTTTTTCGCTCCATTAGATCTATTTTTCTTACCAACTCTAGCATAGTGCCATGAGCATAATATTATACAATTCGTTCTAGTGTTTATTTCTGGATAGCCTTCTTTATAATCTTTCCTTTTCTTCCCAGTTAATTTTTCATCTATCTGAGACAATTCAATGTTGCTTGCTCTTTTCTATATCTCATCTATTCTTTGAGGCCTTTGAGTTAGTTATTTCATTTTTCAAATATTTATATTATCGTACATCAGGAGAGGGCAAAATCATTGAAGCTACCAACACATATTACCATTGATGCCGGAAGAACTCAGATTGCTCCAAGTAAGTTATATGAAATTCACTCAAGTAGATCGATTTTTTCCACAGCAAATTTATCAAGTTCACCAATTTTTCACCTTTTTGTTCTTTCAGATTCGAGAACGGTGATGGCAATTCTTGGTAAGTAGATTTCTTCCATGCAACGTTTATAAATCAAAGAGTCTTTGTTTCTGCTGTATTCAATTTGAGCATTCCTTTTTTAGCAAAATTCCTAAGATAGGAAGAATGCTCCCTCAAACTTATTTTGAAATAAAACGTTCACTACTTTAAGACCTTGCCATTGGTTTCTATCTATATTCTACCAACTCAGCAATCACTCTTTTGTTTGACTCCTATTTTTGGTTAGCTTAACTGGTGGATCTACTTAACAATTTCATTTTGGTGCTAACTAAAATTAATATATACTAATTTGGTTCCATTGAATATGATAGCATACACTTCTTACTTCCAAATTGCAGGCCCTGTTGAAGTTGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAG ATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTGTCAAAGCCAAATTAGCCAAAAGCAATGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGATGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACACATATTACCATTGATGCCGGAAGAACTCAGATTGCTCCAAATTCGAGAACGGTGATGGCAATTCTTGGCCCTGTTGAAGTTGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAG ATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTGTCAAAGCCAAATTAGCCAAAAGCAATGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGATGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACACATATTACCATTGATGCCGGAAGAACTCAGATTGCTCCAAATTCGAGAACGGTGATGGCAATTCTTGGCCCTGTTGAAGTTGTTGATGATGTAACTGGTGGGTTGAAACTTTTGTAG MDLAWLSAIVVGAGCLVLGYYIGSKYPPRIFVKAKLAKSNESSKNGKKDKPKEPLEVESLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL Homology
BLAST of HG10000335 vs. NCBI nr
Match: XP_038901927.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90 Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of HG10000335 vs. NCBI nr
Match: XP_004148093.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis melo] >KAA0042983.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >KGN63396.1 hypothetical protein Csa_022142 [Cucumis sativus]) HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90 Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of HG10000335 vs. NCBI nr
Match: XP_022148652.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89 Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of HG10000335 vs. NCBI nr
Match: KAG7035146.1 (Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 338.6 bits (867), Expect = 3.4e-89 Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of HG10000335 vs. NCBI nr
Match: XP_022947215.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947217.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 338.2 bits (866), Expect = 4.4e-89 Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.8e-30 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29 Identity = 70/128 (54.69%), Postives = 88/128 (68.75%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29 Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2) HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25 Identity = 69/180 (38.33%), Postives = 106/180 (58.89%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23 Identity = 77/193 (39.90%), Postives = 105/193 (54.40%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy TrEMBL
Match: A0A5A7TI30 (Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00570 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy TrEMBL
Match: A0A0A0LTR6 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy TrEMBL
Match: A0A1S3C945 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy TrEMBL
Match: A0A6J1D5N0 (Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111017259 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 5.6e-90 Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of HG10000335 vs. ExPASy TrEMBL
Match: A0A6J1G686 (Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89 Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
BLAST of HG10000335 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 5.6e-66 Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of HG10000335 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 5.6e-66 Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of HG10000335 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 242.7 bits (618), Expect = 2.3e-64 Identity = 132/180 (73.33%), Postives = 144/180 (80.00%), Query Frame = 0
BLAST of HG10000335 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 111.3 bits (277), Expect = 8.1e-25 Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of HG10000335 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 66.2 bits (160), Expect = 3.0e-11 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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