HG10000222 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000222
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCyclin
LocationChr09: 2385920 .. 2386705 (-)
RNA-Seq ExpressionHG10000222
SyntenyHG10000222
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACCGGCAGCGACTTTGCCGCTCCGGGCCGAGCAGAGGGCGATAACGCAGCGGAGCCAACACCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGGCTCGTGGCTCGTAACGACCGTCTCGTAAATGGGGTGAGCCAGAGCCAGCAGCTGGAAGAGTTAGGCTGCTGCAGCTCTTCCTCTAGCCAATTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACCATTTCTATATTGAAGTACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGTCTTGTGGTTGGATTCGTTTATATTGATAGATTGATTCATCGGCATCCCGACTCGCTCGTCATCTCTTTGAATGTTCATCGACTTCTCGTCACTAGTGTCATGGTTGCCTCTAAGATGCTTGACGACGTGTGAGAGTCTCTCTATAACTTATATCTGATTAATTTTTTTCAAAATCGATTTGAAATGACTTTTTTTTTAACGGTTGACAGGCATTACAACAACGCATTTTATGCTAGAGTGGGAGGGGTGAGTAAATTAGAGTTGAACAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTGGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGTTGGCATTTGGAGAAAGAGATGTTATTGAATGGTAATGGGGAGATGCAAAGAGTGGAAAGACCGTCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTCGACGACACTCTTCTTTCTTCTTCGCCTCCTTAA

mRNA sequence

ATGTTAACCGGCAGCGACTTTGCCGCTCCGGGCCGAGCAGAGGGCGATAACGCAGCGGAGCCAACACCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGGCTCGTGGCTCGTAACGACCGTCTCGTAAATGGGGTGAGCCAGAGCCAGCAGCTGGAAGAGTTAGGCTGCTGCAGCTCTTCCTCTAGCCAATTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACCATTTCTATATTGAAGTACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGTCTTGTGGTTGGATTCGTTTATATTGATAGATTGATTCATCGGCATCCCGACTCGCTCGTCATCTCTTTGAATGTTCATCGACTTCTCGTCACTAGTGTCATGGTTGCCTCTAAGATGCTTGACGACGTGCATTACAACAACGCATTTTATGCTAGAGTGGGAGGGGTGAGTAAATTAGAGTTGAACAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTGGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGTTGGCATTTGGAGAAAGAGATGTTATTGAATGGTAATGGGGAGATGCAAAGAGTGGAAAGACCGTCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTCGACGACACTCTTCTTTCTTCTTCGCCTCCTTAA

Coding sequence (CDS)

ATGTTAACCGGCAGCGACTTTGCCGCTCCGGGCCGAGCAGAGGGCGATAACGCAGCGGAGCCAACACCAAGAGTGCTCATCATATTAGCCTTCGTCCTAGACCGGCTCGTGGCTCGTAACGACCGTCTCGTAAATGGGGTGAGCCAGAGCCAGCAGCTGGAAGAGTTAGGCTGCTGCAGCTCTTCCTCTAGCCAATTAGGAAACAGCTTCAATGCATTCCATGGAGTCCGAGCTCCCACCATTTCTATATTGAAGTACTTGGAGAGAATTTACAAATACACCAATTGTAGCCCTTCTTGTCTTGTGGTTGGATTCGTTTATATTGATAGATTGATTCATCGGCATCCCGACTCGCTCGTCATCTCTTTGAATGTTCATCGACTTCTCGTCACTAGTGTCATGGTTGCCTCTAAGATGCTTGACGACGTGCATTACAACAACGCATTTTATGCTAGAGTGGGAGGGGTGAGTAAATTAGAGTTGAACAAGCTGGAATTGGAAATGCTTTTTTTGTTGGATTTTGGAGTGACGGTTAGTTCAAGGGCTTTTGAAACTTATTGTTGGCATTTGGAGAAAGAGATGTTATTGAATGGTAATGGGGAGATGCAAAGAGTGGAAAGACCGTCGTTGATGCCTACTAATAGTTTGGACGACGTGTCGGAAATTTCAGTCGACGACACTCTTCTTTCTTCTTCGCCTCCTTAA

Protein sequence

MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLLSSSPP
Homology
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BLAST of HG10000222 vs. NCBI nr
Match: XP_038901956.1 (cyclin-U1-1 [Benincasa hispida])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 221/234 (94.44%), Postives = 228/234 (97.44%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRL+NGVSQS+QLEE GCCS
Sbjct: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNGVSQSRQLEESGCCS 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
            SS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSL+
Sbjct: 61  PSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLI 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTS+MVASKMLDDVHYNNAFYARVGGVSK+ELNKLELEMLFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSIMVASKMLDDVHYNNAFYARVGGVSKVELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLLSSSPP 235
           R FETYCWHLEKEMLLNGNGEMQR+ERP LMPTNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RVFETYCWHLEKEMLLNGNGEMQRMERP-LMPTNSLDDVSEISVDDTLASSSPP 233

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BLAST of HG10000222 vs. NCBI nr
Match: KAE8652302.1 (hypothetical protein Csa_022481 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 6.5e-117
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTGSDFAAPGR EGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  SQQLEELGCCS
Sbjct: 65  MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 124

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 125 SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 184

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 185 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 244

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           R FETYCWHLEKEMLLNGNGEMQRVERP +MPTN+LDDVSEISVDDTLL SSSPP
Sbjct: 245 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 297

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BLAST of HG10000222 vs. NCBI nr
Match: XP_004151930.2 (cyclin-U1-1 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 6.5e-117
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTGSDFAAPGR EGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  SQQLEELGCCS
Sbjct: 57  MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 116

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 117 SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 176

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 177 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 236

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           R FETYCWHLEKEMLLNGNGEMQRVERP +MPTN+LDDVSEISVDDTLL SSSPP
Sbjct: 237 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 289

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BLAST of HG10000222 vs. NCBI nr
Match: XP_008455834.1 (PREDICTED: cyclin-U1-1 [Cucumis melo] >KAA0042430.1 cyclin-U1-1 [Cucumis melo var. makuwa] >TYJ98312.1 cyclin-U1-1 [Cucumis melo var. makuwa])

HSP 1 Score: 424.1 bits (1089), Expect = 7.9e-115
Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           RAFETYC HLEKEMLLNGNGEMQRVERP +MPTN+LDDV EISVDDTLL SSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

[Close]
BLAST of HG10000222 vs. NCBI nr
Match: KAG7034959.1 (Cyclin-U1-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 199/234 (85.04%), Postives = 215/234 (91.88%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DF A G AEGDN AEPTPRVLIILA VLDRLVARNDR+V+G+  + Q+EE   C 
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIVDGI--THQIEESSSC- 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
            S+S +GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  -STSHIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASK+LDDVHYNNAFYARVGGV+K+ELNKLELE+LFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKILDDVHYNNAFYARVGGVNKVELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLLSSSPP 235
           RAFETYC HLEKEMLLNGNGE+QR+ERP +M TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERP-IMATNSLDDVSEISVDDTLASSSPP 229

[Close]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.8e-60
Identity = 124/221 (56.11%), Postives = 152/221 (68.78%), Query Frame = 0 

Query: 13  AEGDNAAEP-----------TPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSS 72
           A GD+  +P           TPRVL I++ V+++LVARN+ L                + 
Sbjct: 4   AAGDDELDPVVGPESATEAATPRVLTIISHVMEKLVARNEWL----------------AK 63

Query: 73  SSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVI 132
            +   G S  AFHGVRAP+ISI KYLERIYKYT CSP+C VVG+VYIDRL H+HP SLV+
Sbjct: 64  QTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVV 123

Query: 133 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSR 192
           SLNVHRLLVT VM+A+K+LDDVHYNN FYARVGGVS  +LNK+ELE+LFLLDF VTVS R
Sbjct: 124 SLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFR 183

Query: 193 AFETYCWHLEKEMLLNGNGEMQRVERP---SLMPTNSLDDV 220
            FE+YC+HLEKEM LN      +  +P   SL P ++L  +
Sbjct: 184 VFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSPASTLSSL 208

[Close]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-38
Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0 

Query: 24  RVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRAPTISI 83
           +++  L+ +L+R+   ND      +QSQ++                 + FHG+  PTI+I
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRV-----------------SVFHGLSRPTITI 71

Query: 84  LKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDV 143
             YLERI+KY NCSPSC VV +VY+DR  HR P   + S NVHRLL+TSVMVA+K LDD+
Sbjct: 72  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 131

Query: 144 HYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEMLL 197
           +YNNA+YA+VGG+S  E+N LEL+ LF L F + V+   F  Y  +L+KEM L
Sbjct: 132 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match: Q0J9W0 (Cyclin-P1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP1-1 PE=3 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-37
Identity = 85/186 (45.70%), Postives = 115/186 (61.83%), Query Frame = 0 

Query: 18  AAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLG---NSFNAFH 77
           A+ P P  L ++A  + RLVARND           +E L     +++ LG    +F A  
Sbjct: 18  ASAPPPPELDMVARAVQRLVARND----------AVEALSGGGEAAAGLGAGMAAFEAAR 77

Query: 78  GVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVM 137
           G  AP I + +YLER+++Y    P C VV + Y+D   HR P + V S NVHRLL+  ++
Sbjct: 78  GAPAPRIGVAQYLERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACLL 137

Query: 138 VASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEM 197
           VASK+LDD H+NNAF+ARVGGVS  E+N+LELE+L +LDF V +S R +E Y  HLEKE 
Sbjct: 138 VASKVLDDFHHNNAFFARVGGVSNAEMNRLELELLAVLDFEVMLSHRVYELYREHLEKEA 193

Query: 198 LLNGNG 201
             +G G
Sbjct: 198 RRDGGG 193

[Close]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.9e-37
Identity = 91/210 (43.33%), Postives = 133/210 (63.33%), Query Frame = 0 

Query: 23  PRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRAPTIS 82
           P+VL++LA  LDR V +N+ L++                 S+++ +S   FHG RAP +S
Sbjct: 36  PKVLLLLAAYLDRSVQKNEDLLD-----------------SNKIKDSSTIFHGHRAPDLS 95

Query: 83  ILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDD 142
           I  Y ERI+KY+ CSPSC V+  +Y++R + + P   + SL+VHRLL+TSV+VA+K  DD
Sbjct: 96  IKLYAERIFKYSECSPSCFVLALIYMERYL-QQPHVYMTSLSVHRLLITSVVVAAKFTDD 155

Query: 143 VHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKE-MLLNGNGE 202
             +NNAFYARVGG+S +E+N+LEL++LF LDF + V    F +YC  LEKE M+L  +  
Sbjct: 156 AFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVLVIDRP 215

Query: 203 MQRVERPSLMPTNSLDDVS-EISVDDTLLS 231
           +Q+V        NS  D+S   S+D++  S
Sbjct: 216 IQQVH-----GVNSTKDLSRNSSIDESCKS 222

[Close]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.9e-36
Identity = 77/176 (43.75%), Postives = 111/176 (63.07%), Query Frame = 0 

Query: 19  AEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRA 78
           AE  PRV+ IL+ +L R+  RND                  +++  +   + +AF G+  
Sbjct: 7   AEAVPRVVAILSSLLQRVAERND--------------AAAAAAAVGEEAAAVSAFQGLTK 66

Query: 79  PTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASK 138
           P ISI  YLERI+++ NCSPSC VV ++Y+DR + R P   V S NVHRLL+TSV+ A K
Sbjct: 67  PAISIGGYLERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVK 126

Query: 139 MLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEM 195
            +DD+ YNNA++ARVGG+S +E+N LE++ LF + F + V+  AF +YC  L+ EM
Sbjct: 127 FVDDICYNNAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEM 168

[Close]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match: A0A0A0LQH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422050 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTGSDFAAPGR EGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  SQQLEELGCCS
Sbjct: 1   MLTGSDFAAPGRVEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--SQQLEELGCCS 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           R FETYCWHLEKEMLLNGNGEMQRVERP +MPTN+LDDVSEISVDDTLL SSSPP
Sbjct: 181 RVFETYCWHLEKEMLLNGNGEMQRVERPLIMPTNTLDDVSEISVDDTLLVSSSPP 233

[Close]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match: A0A5D3BEZ8 (Cyclin-U1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00280 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.8e-115
Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           RAFETYC HLEKEMLLNGNGEMQRVERP +MPTN+LDDV EISVDDTLL SSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

[Close]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match: A0A1S3C1Y7 (cyclin-U1-1 OS=Cucumis melo OX=3656 GN=LOC103495936 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.8e-115
Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRL+N +  +QQLEELGCCS
Sbjct: 1   MLTGNDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLLNEL--TQQLEELGCCS 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
           SSS+ LGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV
Sbjct: 61  SSSNHLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSK ELNKLELEMLFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKGELNKLELEMLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLL-SSSPP 235
           RAFETYC HLEKEMLLNGNGEMQRVERP +MPTN+LDDV EISVDDTLL SSSPP
Sbjct: 181 RAFETYCCHLEKEMLLNGNGEMQRVERPLVMPTNTLDDVLEISVDDTLLVSSSPP 233

[Close]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match: A0A6J1G7K4 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451542 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.0e-103
Identity = 198/234 (84.62%), Postives = 214/234 (91.45%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DF A G AEGDN AEPTPRVLIILA VLDRLVARNDR+V+G+  + Q+EE   C 
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIVDGI--THQIEESSSC- 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
             +S +GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  -GTSHIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLN+HRLLVTSVMVASK+LDDVHYNNAFYARVGGV+K+ELNKLELE+LFLLDFGVTVSS
Sbjct: 121 ISLNIHRLLVTSVMVASKILDDVHYNNAFYARVGGVNKVELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLLSSSPP 235
           RAFETYC HLEKEMLLNGNGE+QR+ERP LM TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERP-LMATNSLDDVSEISVDDTLASSSPP 229

[Close]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match: A0A6J1I5U7 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469864 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.7e-103
Identity = 197/234 (84.19%), Postives = 213/234 (91.03%), Query Frame = 0 

Query: 1   MLTGSDFAAPGRAEGDNAAEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCS 60
           MLTG+DF A G AEGDN AEPTPRVLIILA VLDRLVARNDR+ +G+  + Q+EE   C 
Sbjct: 1   MLTGNDFPANGLAEGDNVAEPTPRVLIILACVLDRLVARNDRIADGI--THQIEESSSC- 60

Query: 61  SSSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLV 120
             +S +GNSFNAFHGVRAP ISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHP+SLV
Sbjct: 61  -GTSHIGNSFNAFHGVRAPAISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPNSLV 120

Query: 121 ISLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSS 180
           ISLNVHRLLVTS+MVASK+LDDVHYNNAFYARVGGV+K+ELNKLELE+LFLLDFGVTVSS
Sbjct: 121 ISLNVHRLLVTSIMVASKILDDVHYNNAFYARVGGVNKVELNKLELELLFLLDFGVTVSS 180

Query: 181 RAFETYCWHLEKEMLLNGNGEMQRVERPSLMPTNSLDDVSEISVDDTLLSSSPP 235
           RAFETYC HLEKEMLLNGNGE+QR+ERP LM TNSLDDVSEISVDDTL SSSPP
Sbjct: 181 RAFETYCLHLEKEMLLNGNGELQRIERP-LMATNSLDDVSEISVDDTLASSSPP 229

[Close]
BLAST of HG10000222 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 231.5 bits (589), Expect = 7.0e-61
Identity = 124/221 (56.11%), Postives = 152/221 (68.78%), Query Frame = 0 

Query: 13  AEGDNAAEP-----------TPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSS 72
           A GD+  +P           TPRVL I++ V+++LVARN+ L                + 
Sbjct: 4   AAGDDELDPVVGPESATEAATPRVLTIISHVMEKLVARNEWL----------------AK 63

Query: 73  SSSQLGNSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVI 132
            +   G S  AFHGVRAP+ISI KYLERIYKYT CSP+C VVG+VYIDRL H+HP SLV+
Sbjct: 64  QTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVV 123

Query: 133 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSR 192
           SLNVHRLLVT VM+A+K+LDDVHYNN FYARVGGVS  +LNK+ELE+LFLLDF VTVS R
Sbjct: 124 SLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFR 183

Query: 193 AFETYCWHLEKEMLLNGNGEMQRVERP---SLMPTNSLDDV 220
            FE+YC+HLEKEM LN      +  +P   SL P ++L  +
Sbjct: 184 VFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSPASTLSSL 208

[Close]
BLAST of HG10000222 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39
Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0 

Query: 24  RVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRAPTISI 83
           +++  L+ +L+R+   ND      +QSQ++                 + FHG+  PTI+I
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRV-----------------SVFHGLSRPTITI 71

Query: 84  LKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLDDV 143
             YLERI+KY NCSPSC VV +VY+DR  HR P   + S NVHRLL+TSVMVA+K LDD+
Sbjct: 72  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 131

Query: 144 HYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEMLL 197
           +YNNA+YA+VGG+S  E+N LEL+ LF L F + V+   F  Y  +L+KEM L
Sbjct: 132 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of HG10000222 vs. TAIR 10
Match: AT3G60550.1 (cyclin p3;2 )

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-33
Identity = 71/186 (38.17%), Postives = 111/186 (59.68%), Query Frame = 0 

Query: 22  TPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRAPTI 81
           TP V+ +L+ ++DR + RN+R+                +  SS  G     F     P +
Sbjct: 29  TPLVISVLSSLIDRTLTRNERISRR-------------ALPSSGAGGKTQIFDCREIPDM 88

Query: 82  SILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASKMLD 141
           +I  YL RI++YT   PS  VV +VYIDR    +P   +   NVHRLL+T++M+ASK ++
Sbjct: 89  TIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVE 148

Query: 142 DVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEMLLNGNGE 201
           D++Y N+++A+VGG+   +LNKLELE LFL+ F + V+   FE+YC HLE+E+   G  +
Sbjct: 149 DLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREVSFGGGYQ 201

Query: 202 MQRVER 208
           +++  R
Sbjct: 209 IEKALR 201

[Close]
BLAST of HG10000222 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 138.7 bits (348), Expect = 6.2e-33
Identity = 65/126 (51.59%), Postives = 92/126 (73.02%), Query Frame = 0 

Query: 68  NSFNAFHGVRAPTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHR 127
           +S   F G   P ISI  YL+RI+KY+ CSPSC V+  +YID  +H+   +L+  LNVHR
Sbjct: 60  DSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHK-TRALLKPLNVHR 119

Query: 128 LLVTSVMVASKMLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYC 187
           L++T+VM+A+K+ DD ++NNA+YARVGGV+  ELN+LE+E+LF LDF + V  + F T+C
Sbjct: 120 LIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHC 179

Query: 188 WHLEKE 194
             LEK+
Sbjct: 180 CQLEKQ 184

[Close]
BLAST of HG10000222 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 138.3 bits (347), Expect = 8.1e-33
Identity = 69/178 (38.76%), Postives = 110/178 (61.80%), Query Frame = 0 

Query: 19  AEPTPRVLIILAFVLDRLVARNDRLVNGVSQSQQLEELGCCSSSSSQLGNSFNAFHGVRA 78
           AE  P V+  ++ +L R+   ND L     + +++                 +AF+ V  
Sbjct: 17  AEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRI-----------------SAFNAVTK 76

Query: 79  PTISILKYLERIYKYTNCSPSCLVVGFVYIDRLIHRHPDSLVISLNVHRLLVTSVMVASK 138
           P+ISI  Y+ERI+KY +CS SC +V ++Y+DR I + P   + S NVHRL++TSV+V++K
Sbjct: 77  PSISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAK 136

Query: 139 MLDDVHYNNAFYARVGGVSKLELNKLELEMLFLLDFGVTVSSRAFETYCWHLEKEMLL 197
            +DD+ YNNAFYA+VGG++  E+N LEL+ LF + F + V+   +  YC  L++EM++
Sbjct: 137 FMDDLCYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

The following BLAST results are available for this feature:
BLAST of HG10000222 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038901956.11.4e-11994.44cyclin-U1-1 [Benincasa hispida][more]
KAE8652302.16.5e-11794.04hypothetical protein Csa_022481 [Cucumis sativus][more]
XP_004151930.26.5e-11794.04cyclin-U1-1 [Cucumis sativus][more]
XP_008455834.17.9e-11593.19PREDICTED: cyclin-U1-1 [Cucumis melo] >KAA0042430.1 cyclin-U1-1 [Cucumis melo va... [more]
KAG7034959.11.8e-10385.04Cyclin-U1-1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of HG10000222 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LJ459.8e-6056.11Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1[more]
O805133.6e-3846.82Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
Q0J9W03.1e-3745.70Cyclin-P1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP1-1 PE=3 SV=2[more]
Q75HV06.9e-3743.33Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1[more]
Q7XC359.9e-3643.75Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1[more]
BLAST of HG10000222 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQH03.1e-11794.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422050 PE=3 SV=1[more]
A0A5D3BEZ83.8e-11593.19Cyclin-U1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00280 PE... [more]
A0A1S3C1Y73.8e-11593.19cyclin-U1-1 OS=Cucumis melo OX=3656 GN=LOC103495936 PE=3 SV=1[more]
A0A6J1G7K42.0e-10384.62Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451542 PE=3 SV=1[more]
A0A6J1I5U75.7e-10384.19Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469864 PE=3 SV=1[more]
BLAST of HG10000222 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G21870.17.0e-6156.11cyclin p2;1 [more]
AT2G44740.12.6e-3946.82cyclin p4;1 [more]
AT3G60550.14.7e-3338.17cyclin p3;2 [more]
AT3G63120.16.2e-3351.59cyclin p1;1 [more]
AT5G07450.18.1e-3338.76cyclin p4;3 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 28..175
e-value: 2.0E-36
score: 125.8
IPR012389Cyclin P/UPIRSFPIRSF027110PREGcoord: 9..225
e-value: 6.7E-64
score: 213.3
NoneNo IPR availableGENE3D1.10.472.10coord: 16..223
e-value: 6.9E-53
score: 181.4
NoneNo IPR availablePANTHERPTHR15615:SF108PROTEIN CNPPD1coord: 16..204
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 16..204
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 81..169
e-value: 0.00107092
score: 35.2921
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 83..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000222.1HG10000222.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding