HG10000199 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000199
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr09: 2045969 .. 2046418 (-)
RNA-Seq ExpressionHG10000199
SyntenyHG10000199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAACTGTTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCGATGGAAGCTAAGAAAGTTGAGCAAAAACCGCCGTCTGGATCGGCGATGGCGAAGCCGAAGACGGCAGAGGCGAGAACCGGTGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAAGTTAGAAGAAGAAGAGGAGGAGGAGAAAATTTCCGGCGGAAGTGGCGGCGATGGTGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAAAGGCAGGACGAGGATTTCAGATGGGAGAATGGATGAAGTTGAAGATGAAAAAGGAAGCTGGAAGCCGGATCTGGAATGTATTCCTGAAGGTCTCCATTAA

mRNA sequence

ATGGGGAATAACTGTTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCGATGGAAGCTAAGAAAGTTGAGCAAAAACCGCCGTCTGGATCGGCGATGGCGAAGCCGAAGACGGCAGAGGCGAGAACCGGTGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAAGTTAGAAGAAGAAGAGGAGGAGGAGAAAATTTCCGGCGGAAGTGGCGGCGATGGTGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAAAGGCAGGACGAGGATTTCAGATGGGAGAATGGATGAAGTTGAAGATGAAAAAGGAAGCTGGAAGCCGGATCTGGAATGTATTCCTGAAGGTCTCCATTAA

Coding sequence (CDS)

ATGGGGAATAACTGTTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCGATGGAAGCTAAGAAAGTTGAGCAAAAACCGCCGTCTGGATCGGCGATGGCGAAGCCGAAGACGGCAGAGGCGAGAACCGGTGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAAGTTAGAAGAAGAAGAGGAGGAGGAGAAAATTTCCGGCGGAAGTGGCGGCGATGGTGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAAAGGCAGGACGAGGATTTCAGATGGGAGAATGGATGAAGTTGAAGATGAAAAAGGAAGCTGGAAGCCGGATCTGGAATGTATTCCTGAAGGTCTCCATTAA

Protein sequence

MGNNCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH
Homology
BLAST of HG10000199 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56
Identity = 122/147 (82.99%), Postives = 131/147 (89.12%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRF 60
           MGNNCFKSNKVMAQDEP+DLLPP+EAKKVE+KP  GSAMAKPKTAEARTGGA+ KKVVRF
Sbjct: 1   MGNNCFKSNKVMAQDEPEDLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGAS-KKVVRF 60

Query: 61  KLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVKGRT 120
           KL+EEEE+      + GDGGVLRIKVVMSQKELKQ+LKDRENNSCTLEELI ELKVKGRT
Sbjct: 61  KLQEEEEK------NSGDGGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKGRT 120

Query: 121 RISDGRMDEVEDEKGSWKPDLECIPEG 148
            ISDGR+D VEDE G WKPDLE IPEG
Sbjct: 121 TISDGRIDAVEDENGRWKPDLEGIPEG 140

BLAST of HG10000199 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.1 bits (518), Expect = 8.2e-49
Identity = 115/155 (74.19%), Postives = 128/155 (82.58%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLL---PPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKV 60
           MGN+CFKSNKVMAQDE    L   PP+EAKKVE+KP +GSAMAKPKTAE R+G AAGKKV
Sbjct: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60

Query: 61  VRFKLEEEEEEEKISGGSGGDG---GVLRIKVVMSQKELKQILKDRENNSCTLEELIAEL 120
           VRFKL+EE+E    SGGSGGDG   GVLRIKVVMSQ+ELKQILK+ EN+S +LEELIAE 
Sbjct: 61  VRFKLQEEDEN---SGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEF 120

Query: 121 KVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH 150
           KVKGRT +SD   DEVEDE GS +P LECIPEGLH
Sbjct: 121 KVKGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152

BLAST of HG10000199 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 3.8e-38
Identity = 100/151 (66.23%), Postives = 111/151 (73.51%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKV 60
           MGN CFKSNKVMAQD+  D  PP   +E KKV+Q+P  GSAMAKPK     TGGAAGKKV
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNG---TGGAAGKKV 60

Query: 61  VRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVK 120
           VRF L+EEE++E+         GVLRIKVV+SQKELKQILK RENNSC+LEELI ELKVK
Sbjct: 61  VRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVK 120

Query: 121 GR-TRISDGRMDEVEDEKGSWKPDLECIPEG 148
           GR T +S        DE GSWKP LECIPEG
Sbjct: 121 GRATTVS-------ADETGSWKPALECIPEG 141

BLAST of HG10000199 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 7.2e-37
Identity = 99/152 (65.13%), Postives = 113/152 (74.34%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKK 60
           MGN CF++NKVMAQD+  D LPP   +EA+KVE++P   GSAMAKPK     TGGAAGKK
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNG---TGGAAGKK 60

Query: 61  VVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELK 120
           VVRF L EEEE++E  + G     GVLRIKVV+SQKELK+ILK+RENNSC+LEELI ELK
Sbjct: 61  VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120

Query: 121 VKGRTRISDGRMDEVEDEKGSWKPDLECIPEG 148
           VKGR          V DE GSWKP LECIPEG
Sbjct: 121 VKGRA-------TTVSDEIGSWKPALECIPEG 142

BLAST of HG10000199 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-33
Identity = 93/150 (62.00%), Postives = 106/150 (70.67%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVR 63
           NC ++N+VMAQDE     P         KVE KP +GSA+A+PKT EAR   A  KKVVR
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARRKKVVR 104

Query: 64  FKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVKGR 123
           F+  E+E        SGG GGVLRIKVV+SQKELKQILKDRE+NS TLEEL+AELK+KGR
Sbjct: 105 FQQREDEI-------SGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR 164

Query: 124 TRISDGRMDEVEDEKGSWKPDLECIPEGLH 150
           T ISD R D  EDE GSW+P LE IPE LH
Sbjct: 165 T-ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of HG10000199 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 100/151 (66.23%), Postives = 111/151 (73.51%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKV 60
           MGN CFKSNKVMAQD+  D  PP   +E KKV+Q+P  GSAMAKPK     TGGAAGKKV
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPKNG---TGGAAGKKV 60

Query: 61  VRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVK 120
           VRF L+EEE++E+         GVLRIKVV+SQKELKQILK RENNSC+LEELI ELKVK
Sbjct: 61  VRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVK 120

Query: 121 GR-TRISDGRMDEVEDEKGSWKPDLECIPEG 148
           GR T +S        DE GSWKP LECIPEG
Sbjct: 121 GRATTVS-------ADETGSWKPALECIPEG 141

BLAST of HG10000199 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.5e-37
Identity = 99/152 (65.13%), Postives = 113/152 (74.34%), Query Frame = 0

Query: 1   MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKK 60
           MGN CF++NKVMAQD+  D LPP   +EA+KVE++P   GSAMAKPK     TGGAAGKK
Sbjct: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNG---TGGAAGKK 60

Query: 61  VVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELK 120
           VVRF L EEEE++E  + G     GVLRIKVV+SQKELK+ILK+RENNSC+LEELI ELK
Sbjct: 61  VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120

Query: 121 VKGRTRISDGRMDEVEDEKGSWKPDLECIPEG 148
           VKGR          V DE GSWKP LECIPEG
Sbjct: 121 VKGRA-------TTVSDEIGSWKPALECIPEG 142

BLAST of HG10000199 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.0e-33
Identity = 93/150 (62.00%), Postives = 106/150 (70.67%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVR 63
           NC ++N+VMAQDE     P         KVE KP +GSA+A+PKT EAR   A  KKVVR
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARRKKVVR 104

Query: 64  FKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVKGR 123
           F+  E+E        SGG GGVLRIKVV+SQKELKQILKDRE+NS TLEEL+AELK+KGR
Sbjct: 105 FQQREDEI-------SGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR 164

Query: 124 TRISDGRMDEVEDEKGSWKPDLECIPEGLH 150
           T ISD R D  EDE GSW+P LE IPE LH
Sbjct: 165 T-ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of HG10000199 vs. ExPASy TrEMBL
Match: A0A4V3WQ11 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029836 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12
Identity = 59/150 (39.33%), Postives = 85/150 (56.67%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKL- 63
           NC  SNK++ QDE D+   P E + +E+                R      KK VRFKL 
Sbjct: 3   NCVTSNKILGQDEKDE--QPREERAIER--------------SVRHVDGGKKKSVRFKLH 62

Query: 64  EEEEEEEKISGGSGGD------GGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKV 123
           EEEEEEE+   G+G +      GG +RI+VV++Q+EL +IL  +   S ++E+++ E+K+
Sbjct: 63  EEEEEEEEEEDGNGEERQGCSKGGAVRIRVVVTQRELIRILNTKSKYS-SVEQMLGEMKL 122

Query: 124 KGRTRISDGRMDEVEDEKGSWKPDLECIPE 147
           K R +IS  R  + E   GSW+P LE IPE
Sbjct: 123 KSR-KISQIRSSDDEGTNGSWRPALESIPE 134

BLAST of HG10000199 vs. ExPASy TrEMBL
Match: A0A7N2MA05 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 63/146 (43.15%), Postives = 87/146 (59.59%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKP-KTAEARTGGAAGKKVVRFKL 63
           NC  SNK +AQ+E      P EA+ VEQ  PS ++  +P K  +   G    KKVVRFKL
Sbjct: 3   NCL-SNKSLAQEEE----VPKEAEVVEQTKPSTASKLEPVKLVDG--GHKKKKKVVRFKL 62

Query: 64  EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDREN-NSCTLEELIAELKVKGRTR 123
           EE++     S       GV+RI+VV++QKELKQIL  +E     ++E+L+  L ++GR +
Sbjct: 63  EEDDTNVGTSSEGDSRSGVVRIRVVVTQKELKQILDCKEGLKYSSVEQLVNALNLRGR-K 122

Query: 124 ISDGR-MDEVEDEKGSWKPDLECIPE 147
           IS+ R  DE E    +W+P LE IPE
Sbjct: 123 ISEVRTSDEDEGINSNWRPALESIPE 140

BLAST of HG10000199 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 0

Query: 4   NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLE 63
           NC + +  +A+ E DDL P    K +E+                      GK   R + E
Sbjct: 3   NCLRHDNGVARKEKDDLDPEPLVKLLEE----------------------GKTSFRGEEE 62

Query: 64  EEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEELIAELKVKGRTRIS 123
            E   E+       +  V+RIKVV+++KEL+QIL   +N   ++++L+  LK  GR  IS
Sbjct: 63  SERSTEE-------ESKVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGR-NIS 116

Query: 124 DGRMDEVEDEKG--SWKPDLECIPE 147
               +E E E+G  +W+P LE IPE
Sbjct: 123 MASYEEDEKEEGDENWRPTLESIPE 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902397.11.8e-5682.99uncharacterized protein LOC120089037 [Benincasa hispida][more]
KAG6570883.18.2e-4974.19hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN63254.13.8e-3866.23hypothetical protein Csa_022493 [Cucumis sativus][more]
TYK24218.17.2e-3765.13hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa][more]
XP_022140639.12.2e-3362.00uncharacterized protein LOC111011249 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQE91.8e-3866.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
A0A5D3DKZ83.5e-3765.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CG851.0e-3362.00uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A4V3WQ112.3e-1239.33Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0298... [more]
A0A7N2MA051.9e-1143.15Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G21680.12.8e-0732.41unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..146
NoneNo IPR availablePANTHERPTHR33148:SF55OS01G0219300 PROTEINcoord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000199.1HG10000199.1mRNA