HG10000197 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000197
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Sodium Bile acid symporter family
Location	Chr09: 2013713 .. 2019785 (-)
RNA-Seq Expression	HG10000197
Synteny	HG10000197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGGTGGGAACCAAATCCCTCCACGGTCTTCTCGTTTCGTCTCATCGGAGCAACCCACCGCCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTTTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGTCAAATTTTTAGTCCCATCAGAGCCTGCGGATTGCCCGATAAGGTTGTGTTTTCTCCCTTTGGATCTTTGTCAATGTTGAAACTCATGCATCGATTTCTTTTCTCTCCATGTAATGGCTTTAAGAAGAGATTTTATCACTGTGATTCAGAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGAAAAATAGGGTTAGTTGGTTCGAGGCCTTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGGTAAGTTGAAGACTTATTGTTTCTTATTTCCATTCAATTGAAATTATATTTATTCTGTCAGCTTATCGTATTTTTGTTCCTCAATTCAATATGTAGCTCTTGTCACTGGTGTAGCACTAGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTCAGCACATTTGGGATATTTGTCATCTCAGGTTAGGAACCGTTACTAACTTTCCACATAAAATGTAGATTTTGTTCTGTAATCTGTTGTTTTATACATGATGTGATTACGTAGGGTTGACATTGCGTACTTCAGAAATTAGTGCGTCAGTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGTATGATTCTCACTTATGATCTTCCATTATATTTTTTTTTGACTTGTAAGTTCATTCTTCGAGTATTCGTATTTTCATATTGTTTATAATTAACTTTTTCCCCTTCATACTTTTTTTTTTTAACTGTGGTTTCATTTTTGTATGTGAAAGGCCTTGTGTGTATGAATTTTCTATTATTGGTCAAGTGACTTTCCACGCATTAAAATTTGTTTTGTTATCTGTTTCATCATTTCCTGATGGCTGATGCTCATGTTTTTGGAGTGATAATGTGATTCATGTTACTTGACTTATTATCATTTGACTTTTATTTGTTCATCCGTATTTTAGCACTTAGTTAACTAGTTTGAAGAGGTTTCCTACAATGCAGTTGGATGTTTAAGTTTTGTACACTGTTTTGACCTTTGGGAGTGGGGTGGTGGGTGGTGGTTGCTCTTTTAGTACTTACCATCCTCATGTTTGGCATAAATGAAGGGATCAAAGAGATTATTACAGATCATGTTCACTAAGAAATAACTCGAAATTGGATCTTGGTCTTTTTGAGATTGTTCCTTTTTGTAGTAATAAGGATGTTTTCTTGTCTCTCATTTCTTTTACAAATGAATTGAATAACCTTGTTCATGAATCATGGGTAGGTTTTATGGCATATTCAATGCATGGGTATAATTTGCACTGTTGTATCAATTTTGGTATATTTGTTGAGCTTGTATTCACTCTCTCTCTCTCTTTCTCTCTCTATTGTTTATTGTCAGGCTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGGTTTCTTTACGAAATTATTTTTAGCCATTGAATGACAGGTTAGAAATTTCATCATATGTCCCTTGTCCAAAAAAAATAAGGACCAGTTAGCCATTCAGATTTTCTTGGTCTATCTTCTGCTTGAAAATTGAAGTTGCTAGCTTCATGATGCAAGCGTAATATTTTTAAACTATCATTTGTTGTGTTTAGAGAAGAAAAATTACAATTATTACATGCAATGTTAAAATGAGGTATAATTTGATAATACTTGCATTAGCTGAAGATTCTGAATGGTTTTCTCCTAGAACATGAACATTATATTGGTATAAGATAAATTTGGAATTGGTAGTCAATAGTTTGATCAAGAGTTTGGTCTAGTAAAGGTTCGTGCAGAGGCCATATATGCATCCTAGTATTTACTTTACTTAGTGATCTAGTTAGCCTTAACCAAATTCAATGGACCATTTATATTGGATAACTGAAAAGTCAGTTGCTTATTTAAAATGTACTCATTTGTACCAGTGGTCTACTTTTGCCCTATAGAAAGAATGTAATATTCTGCCAATTTAACAATTTAATAATTAATAGGTTTTTTTTTCCCAAAAAATTGTAATCATTGTTGGTGTATAATCTCTTCTTAGGTTAGAGAGTGTTCACCTTATCCTGTATCTGGCAGCAAATGATCTCTACTATTGCTTCAAATTGATGCTATTGTAATAGGAAATGGTCATTGAGGGGAGAAGGTACAAATTCAACTAACTTGAGGACTGCTAGAAGTTTAATATTTTCAATTCGATGTGGAACTCTAAGAAATTACACTGATTTGCAAAAAAGTTGCAAATACCTTGCAGTGCAATTTGGAAAATATTTTTTTAGACATGAAACTCAGTTTCAATAATATGGATTAGTATCAATATGGATGAATATGCAACTCTTCGGGATTTCTTTTATGGTTTACTCTCTTATTTGAATGAAGAACCTACTTTCCCTTCAGTCTAACCCATTGTTTCTCTACTGTCTATAGGATTAGCAATATTTACCTGCATGCCCACTACATTATCAAGTGGTGTGGCACTAACTCAGGTATGAAAGTTGCTCCCCACCCCCCACCCACCACACACAAGAAAAAAATGATGTTTAATACTCTATTCTTATTCCATTTATGTTTTTCAAACTCAGCTTGCTGGTGGGAATTCTGCACTTGCTCTGGCAATGACAGTGATATCAAATATGTTAGGAATATTGGCTGTGAGTTTAAAATTATATCCTTAACTTTCTTTTTCTCAAATATCTAAGAATGAAAAGAATCGTGTAAACATTGAAGAATCTCTGTACTAATTTTCTAAATCCACTTTCAGAGCTTTATTTCATCAATCATTTCCAAAAAATTGTACATTGATTCTAAAGCATGGTCTTTTGTGGTTTTTAATCAACTATAATGATCCTTTATATGATCATTAGTTTGAGTATAATCTGCATTTAAAGTGGATGTCCTAGTCTAGTACCATAACACACCGCAGGATACCTACTGTGTATCTCAGTTTATGATAATTTTGCTTTACGTGTCAGCCACTTCAAGGTGTTTAAAATCATACTGTCCCTCTAAATCGAGGTCTCTCATATTCCTTTCTTAAGTGTTGAGGTGCTCCATACATGCTTCTGTACACAGTTAGCTGTTAGGTTATAAGGTGAGTCAAGGTTAGATAGACCTTGTAGTAGATGTTTGTAGAATTCAGCCAAATCACCCTATGTGAAGAGATCATTAGCCATATAGTTTATTTCCATTGAATCAGCTCAATTTAAGAGCACTAGCCAACAGAAGAGCCAATGTATTATTATTATTTTATAAGGAACGTATTTAATTATATTTATAAGAAATGATAGTACTATCTCCCATACTTCCAAAACCTCTAGCTTTTCTTTCCAGCCACTTTTTCCCCCTTTTTCATAAAGCTACTTTCACGACATTCTTCTACACTCTTGAAAAGGGCATAGAAGGAGCCAGAGTAGTCACATTTTTTCTAGTGTTCTTTATCTTTTATTCCTTTAGATAATGTGTTCTGCTTAATTGTGAGATAACGTGTTCTGCTTAATTGTGAGATAATATGTTCTGCTTAATTGTTACATACTACCCTCTAGATAAAGTTGATTTTCATTTCCTAAAATTTTCTGTAGATTCCATTTTCTATCTCAAAATTCATAGCTGATGGAGTTGGTATAGCTGTTCCAACAAAGGAGTTACTCAGAAGTCTTGTACTTATTCTGCTAATTCCACTCATTTTTGGGAAGGTGAACGGATTTTTCTTTGAAGAGTCCATTCTAAGAAACTTGTCTCAAAGCTTACTATATTTCCCTTCTTACAGTTCCTAGTTATTATTGTAAGAACGGATGGTAGGGACATGTGTAGTAGCAGCTTGTGATAAAATTGTTTAGAAACGAATGTATAATTTACTGTGACTTATTTCTTGTGACAAGGAACTTTTCAACTTAGGCCAATACACACACAAACAATCTCCAATTACACACAAACAATCTTTAGCTTTCTCAACTTGGATTTTTCATGTAAATTATTTGCAACAATTAGACGATTCATCTACAATTTAGTTGTTTTTTAACTTGAAAGGGGTATTATATTATAACTTAAATAAATAAAGGAATAAAACCAACTCAGTTTTAAAGATGGGGTTCCTATTTTCTCCTTACTCTCTGCTTCTTTTTTTCTTTTTGCTAAAAGCTTTATTTTAGGCTGTGATATTGCAGAAAGTTTTTTGGTATACCATGAGATAGATCTTGCGTATAACTAGTTATTGAAATATGATTATGTCACTTGTTTTTTCCCCCTTTGTTAAATAATTTTATTATTTATTTATTCCATCCTTTTCTTTTCCTTTGACAGATCTTGAGAGAGTCATTCAAAGGTGATTTCTTGTCAGTATCATTCGCTTTCTTGAGTTCAAGTTTGCTTCTTTGCTAGCTTGCATGAAGTGTGCGGACTTCATTTTGCAGAAACTGTTTACAATGGTTGCCCATCATCTTTAATGTTTAACCTTAGAACGTTCTTTGAGAAGAAATTAACCTTAGAACGTTCTTAATTTTTTCTTTTTTTCTTTTTTATAATTGTTCTTCGAGTGTCTGCTAAGTTATTGTTTCTCTTCTTAATCTTCATTTAAGGAGTGGCTGACTTTGTTGATGGAAACCGAAAGCTTTTTCCAAGGATTAGTGCAATTCTTCTCAGTCTTGTGAGACATGAATCATTATTATCGTCATTATTATTTTTATTGTTTCACTTCATGATTGCTTGTATTGTTTTTCTTTAAAATTTTATTTGTCTATTTAGATGTTCTAGTCATTTTTTATTCTTTTAATTATACGTTCACTTCTTCTGGAAAGTAAAATAATTGCTTAGCATAATGGGTAGCCATGTTGTTAAGAAATAATTACTAGGTTCTACTTGATAAGTTGTTTAATAGACGTGCTATAATATTTTATTTTGTGAAATCGTTAATTTATGTTCTTTAATTAGACTATCACATTTTAAGATCAGGTGCCATGGATGCAAGTGAGCAGATCAAGGTCACTACTTCTGATGGTCAAGCCTGAAATATTTCTCGCAGCCATAGGAATGGGAACGTAAGCTACCAAAACCCTTCCTAGTTTCCTTATCTTTGCCCAATAAACCATTGAATCTACTGGTCAATCACAATTTTCTTTCAGATTGATGCCACTTAAAGACTTACACTGTTGTATTTTCAGATTCTTGCATCTCACCTTATTGGCCTTTAATGCTCTTGGTATACGAACCCTAGCAGCCCTTTCTGGTGGTAACATGTCTGTTTTCTCAAGAAGACGAAATGCTAGTGCCGTTTTGCTCGTGGCGAGTCAGGTACATAAACATAAGTATATTTATAGTGCTTTTGAAAACTCATAAGATTTTTATAGCACATCTATGTGGGAAGAAAAGAAAAAGAAAGGAGAGTTCCTGTGAAGATGGTTGTGTTGATCTCGAGCATGGACACTTTAGTTTAAGTAATGTGTTCAACATGTATTGGACACTAATGCGATAAGTATAATAGACATGTTAAACATTCATAGTTGAACAAAATAGTGTTAAACTGTCATAGTTGAACAAAATAAACGCAAGATCGGCACTTATTGGATACATGTCAATCACTTATTAAGCACAATAAAAGAGACATGTATTTGACACTCAAGAACTTAATGTGGAGCCTCACATACGCACATTCATTGCAGAAAACTCTGCCCGTGATGGTTGCAGTCGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCCGGTTTACTGGTTCTTCCATGTGTTGCAGCACATATAATCCAGGTTTCTTAGATTTTCCCCTTCGAGTGTAATAATTTCCTGTTCAGTTCAATTGACATGAAAGTATTCTTATTTGTAGATTATCATCGACTCCTTTCTTGTCAACTTCTGGCTTGCTTCGGATGACACATCAAATAATGTGAAGGTAACCTGA

mRNA sequence

ATGGCGTTGGTGGGAACCAAATCCCTCCACGGTCTTCTCGTTTCGTCTCATCGGAGCAACCCACCGCCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTTTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGTCAAATTTTTAGTCCCATCAGAGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGAAAAATAGGGTTAGTTGGTTCGAGGCCTTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCACTAGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTCAGCACATTTGGGATATTTGTCATCTCAGGGTTGACATTGCGTACTTCAGAAATTAGTGCGTCAGTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGCTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGGATTAGCAATATTTACCTGCATGCCCACTACATTATCAAGTGGTGTGGCACTAACTCAGCTTGCTGGTGGGAATTCTGCACTTGCTCTGGCAATGACAGTGATATCAAATATGTTAGGAATATTGGCTATTCCATTTTCTATCTCAAAATTCATAGCTGATGGAGTTGGTATAGCTGTTCCAACAAAGGAGTTACTCAGAAGTCTTGTACTTATTCTGCTAATTCCACTCATTTTTGGGAAGGTGCCATGGATGCAAGTGAGCAGATCAAGGTCACTACTTCTGATGGTCAAGCCTGAAATATTTCTCGCAGCCATAGGAATGGGAACATTCTTGCATCTCACCTTATTGGCCTTTAATGCTCTTGGTATACGAACCCTAGCAGCCCTTTCTGGTGGTAACATGTCTGTTTTCTCAAGAAGACGAAATGCTAGTGCCGTTTTGCTCGTGGCGAGTCAGAAAACTCTGCCCGTGATGGTTGCAGTCGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCCGGTTTACTGGTTCTTCCATGTGTTGCAGCACATATAATCCAGATTATCATCGACTCCTTTCTTGTCAACTTCTGGCTTGCTTCGGATGACACATCAAATAATGTGAAGGTAACCTGA

Coding sequence (CDS)

ATGGCGTTGGTGGGAACCAAATCCCTCCACGGTCTTCTCGTTTCGTCTCATCGGAGCAACCCACCGCCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTTTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGTCAAATTTTTAGTCCCATCAGAGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGAAAAATAGGGTTAGTTGGTTCGAGGCCTTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCACTAGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTCAGCACATTTGGGATATTTGTCATCTCAGGGTTGACATTGCGTACTTCAGAAATTAGTGCGTCAGTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGCTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGGATTAGCAATATTTACCTGCATGCCCACTACATTATCAAGTGGTGTGGCACTAACTCAGCTTGCTGGTGGGAATTCTGCACTTGCTCTGGCAATGACAGTGATATCAAATATGTTAGGAATATTGGCTATTCCATTTTCTATCTCAAAATTCATAGCTGATGGAGTTGGTATAGCTGTTCCAACAAAGGAGTTACTCAGAAGTCTTGTACTTATTCTGCTAATTCCACTCATTTTTGGGAAGGTGCCATGGATGCAAGTGAGCAGATCAAGGTCACTACTTCTGATGGTCAAGCCTGAAATATTTCTCGCAGCCATAGGAATGGGAACATTCTTGCATCTCACCTTATTGGCCTTTAATGCTCTTGGTATACGAACCCTAGCAGCCCTTTCTGGTGGTAACATGTCTGTTTTCTCAAGAAGACGAAATGCTAGTGCCGTTTTGCTCGTGGCGAGTCAGAAAACTCTGCCCGTGATGGTTGCAGTCGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCCGGTTTACTGGTTCTTCCATGTGTTGCAGCACATATAATCCAGATTATCATCGACTCCTTTCTTGTCAACTTCTGGCTTGCTTCGGATGACACATCAAATAATGTGAAGGTAACCTGA

Protein sequence

MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGLPDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQPQEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVGIAVPTKELLRSLVLILLIPLIFGKVPWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNASAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTSNNVKVT

Homology

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BLAST of HG10000197 vs. NCBI nr
Match: XP_038900991.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida])

HSP 1 Score: 679.1 bits (1751), Expect = 2.3e-191
Identity = 370/426 (86.85%), Postives = 381/426 (89.44%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MALVGTKSLH LLVSSHRSNPP FC QISR+SSNGA L +SSLALNRKRQI+SPIRACGL
Sbjct: 1   MALVGTKSLHSLLVSSHRSNPPAFCLQISRYSSNGAPLGSSSLALNRKRQIYSPIRACGL 60

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRV+WFEALSTFANNNFLPLALVTGVA+GVANPSLGCLAD
Sbjct: 61  PDKKDDGGRINEPASVSGSENRVTWFEALSTFANNNFLPLALVTGVAVGVANPSLGCLAD 120

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP
Sbjct: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFI+ G
Sbjct: 181 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFISAG 240

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGI VPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 241 VGITVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRKLFPMISAILLSLVPWM 300

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKPEIFLAAIGMGTFLHL LLAFNALGIRTLAA SGGN S+FSRR+NAS
Sbjct: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLALLAFNALGIRTLAAFSGGNESIFSRRQNAS 360

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQL GALGESGLLVLPCVAAHIIQIIIDSFLV  W ASDD+S
Sbjct: 361 AVLLVASQKTLPVMVAVVEQLHGALGESGLLVLPCVAAHIIQIIIDSFLVKLWFASDDSS 420

[Close]

BLAST of HG10000197 vs. NCBI nr
Match: XP_004151888.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] >KGN63253.1 hypothetical protein Csa_022589 [Cucumis sativus])

HSP 1 Score: 660.2 bits (1702), Expect = 1.1e-185
Identity = 359/426 (84.27%), Postives = 374/426 (87.79%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL+ LLV SHRSNPP F FQIS FSSN ALL ++SLALNRKR+ + PIRACGL
Sbjct: 3   MAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEP  VSGS+ RVSWFE LSTFANNNFLPLALVTGVA+GVANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHLQP
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLQP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGIAVPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRMLFPRISAILLSLVPWM 302

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKP+IFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RRN S
Sbjct: 303 QVSRSRSLLLMVKPKIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRRNVS 362

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHI+QIIIDSFLVNFW  SDD+S
Sbjct: 363 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIVQIIIDSFLVNFWFTSDDSS 422

[Close]

BLAST of HG10000197 vs. NCBI nr
Match: XP_008455871.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo] >TYK24216.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 654.8 bits (1688), Expect = 4.6e-184
Identity = 361/426 (84.74%), Postives = 372/426 (87.32%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL    VSSHRSNPP F FQIS FS N ALLR++SLALNRKRQ +SPIRACGL
Sbjct: 3   MAFVGTKSL--FHVSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRVSW E LSTFANNNFLPLALVTGVA+G+ANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHL P
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLHP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGIAVPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRKLFPRISAILLSLVPWM 302

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKPEIFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RRN S
Sbjct: 303 QVSRSRSLLLMVKPEIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRRNVS 362

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHIIQIIIDSFLVNFW  SD +S
Sbjct: 363 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGSS 422

[Close]

BLAST of HG10000197 vs. NCBI nr
Match: KAA0040654.1 (putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 653.7 bits (1685), Expect = 1.0e-183
Identity = 361/429 (84.15%), Postives = 372/429 (86.71%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL    VSSHRSNPP F FQIS FS N ALLR++SLALNRKRQ +SPIRACGL
Sbjct: 3   MAFVGTKSL--FHVSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRVSW E LSTFANNNFLPLALVTGVA+G+ANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHL P
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLHP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK---------------------------------V 300
           VGIAVPTKELLRSLVLILLIPLIFGK                                 V
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKLLFFFVIFISGVADFVDGNRKLFPRISAILLSLV 302

Query: 301 PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRR 360
           PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RR
Sbjct: 303 PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRR 362

Query: 361 NASAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASD 397
           N SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHIIQIIIDSFLVNFW  SD
Sbjct: 363 NVSAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSD 422

[Close]

BLAST of HG10000197 vs. NCBI nr
Match: XP_022134333.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Momordica charantia])

HSP 1 Score: 625.2 bits (1611), Expect = 3.9e-175
Identity = 342/424 (80.66%), Postives = 361/424 (85.14%), Query Frame = 0


Query: 3   LVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGLPD 62
           + GT+SLH  L SS RSNP  F  QISR SSNG+LLRTSS+ LN KRQIF PIRACGLPD
Sbjct: 1   MAGTQSLHSFLFSSPRSNPLAFRLQISRLSSNGSLLRTSSIDLNHKRQIFRPIRACGLPD 60

Query: 63  KKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLADRY 122
           KKD+GGRINEP GV GS N V WF+ALS F ++NFLPLALVT VA G ANPSLGCLADRY
Sbjct: 61  KKDEGGRINEPTGVLGSGNEVIWFKALSNFVDDNFLPLALVTAVAAGFANPSLGCLADRY 120

Query: 123 YLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQPQE 182
           YLSKFST GIFV+SGLTLRT+EISASVEAWPVAVYGLASILLLTPYFSRLILQIHL PQE
Sbjct: 121 YLSKFSTVGIFVVSGLTLRTAEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLHPQE 180

Query: 183 FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVG 242
           FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKF+ADGVG
Sbjct: 181 FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFVADGVG 240

Query: 243 IAVPTKELLRSLVLILLIPLIFGK------------------------------VPWMQV 302
           I VPTKEL RSLVL+LLIPLIFGK                              VPWMQV
Sbjct: 241 ITVPTKELFRSLVLMLLIPLIFGKILRESFKGVADFVDENRKLFPRINAILLSLVPWMQV 300

Query: 303 SRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNASAV 362
           S+SRSLLLMVKPE FL AIGMGTFLHL+LLAFNALGIR LAA+SGG+ SVFSRRRNASAV
Sbjct: 301 SKSRSLLLMVKPEAFLVAIGMGTFLHLSLLAFNALGIRILAAVSGGSQSVFSRRRNASAV 360

Query: 363 LLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTSNN 397
           LLVASQKTLPVMVAVVEQLRGALG+SGLLVLPCVAAHIIQIIIDSFLVNFW  SDD+SNN
Sbjct: 361 LLVASQKTLPVMVAVVEQLRGALGKSGLLVLPCVAAHIIQIIIDSFLVNFWPRSDDSSNN 420

[Close]

BLAST of HG10000197 vs. ExPASy Swiss-Prot
Match: F4IZC4 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.7e-104
Identity = 214/351 (60.97%), Postives = 263/351 (74.93%), Query Frame = 0


Query: 75  GVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLADRYYLSKFSTFGIFV 134
           G+S S  R+ + + L +FA++NFLPLALV+GV LG ANP+LGCLAD+Y  +K ST GIF+
Sbjct: 87  GISASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFI 146

Query: 135 ISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQPQEFVTGLAIFTCMP 194
           ISGLTLRT  I A+V+ WP+ ++GL SILLLTP FSRLI+ + LQP+E VTGL IF CMP
Sbjct: 147 ISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGLGIFCCMP 206

Query: 195 TTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVGIAVPTKELLRSL 254
           TTLSSGVALT LAGGN+ALALA+TV SN+LGIL IPF +S++IA GVG++ PT +L RSL
Sbjct: 207 TTLSSGVALTHLAGGNAALALAVTVASNLLGILTIPFWVSRYIAGGVGVSFPTDQLFRSL 266

Query: 255 VLILLIPLIFGK------------------------------VPWMQVSRSRSLLLMVKP 314
           ++ LLIPLI GK                              VPW+QVSRSRSLLL V+P
Sbjct: 267 IVTLLIPLIIGKVIRESFKGFANFVDNNRKLFSKINAICLSLVPWIQVSRSRSLLLSVQP 326

Query: 315 EIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNASAVLLVASQKTLPVM 374
           ++FLAA+G+G  LHL+LLAFNA+ IR L+ L+GG+    S + N++AVLLV+SQKTLPVM
Sbjct: 327 KVFLAAVGIGILLHLSLLAFNAVSIRILSGLTGGSK---SSKENSTAVLLVSSQKTLPVM 386

Query: 375 VAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWL-ASDDTSNNVK 395
           VAVVEQL GA GE+GLLVLPCVAAH+ QI+IDS LVN WL    DTS  VK
Sbjct: 387 VAVVEQLGGAFGETGLLVLPCVAAHLNQIMIDSVLVNLWLRRGKDTSTKVK 434

[Close]

BLAST of HG10000197 vs. ExPASy Swiss-Prot
Match: B8AJ09 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.2e-97
Identity = 207/382 (54.19%), Postives = 258/382 (67.54%), Query Frame = 0


Query: 45  LNRKRQIFSPIRACG--LPDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLAL 104
           L R R + +   A G   PD   DG +   PA  S S        AL  FA +NFLPLAL
Sbjct: 48  LRRLRPLRAAAAAAGGASPDGA-DGAKRPAPAAASSSLG-----AALVGFARSNFLPLAL 107

Query: 105 VTGVALGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASI 164
           + G+AL + +P+LGCLA +Y LSK+STFGIF+ISGLTLRT E+ A++EAWP  ++GLASI
Sbjct: 108 IAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAWPAGLFGLASI 167

Query: 165 LLLTPYFSRLILQIHLQPQEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISN 224
           LL TP+ ++ I+QI   P EF+TGLA+F CMPTTLSSGV LTQL GGN+ALALAMT ISN
Sbjct: 168 LLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTALALAMTAISN 227

Query: 225 MLGILAIPFSISKFIADGVGIAVPTKELLRSLVLILLIPLIFGK---------------- 284
           +LGI+ +P S++K+I  G G+++PT++L +SLV  LLIP+I GK                
Sbjct: 228 LLGIMIVPLSLAKYIGVGAGVSLPTEKLFKSLVTTLLIPIILGKVARETSKGIAGFVDGN 287

Query: 285 --------------VPWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTL 344
                         VPW+QVSRSRSLLL V+P+ F  A+ +G  LH  LLAFNA  +  L
Sbjct: 288 KQGFSVTSAILLSLVPWIQVSRSRSLLLSVQPKAFAVAVTVGVLLHFALLAFNAAALHIL 347

Query: 345 AALSGGNMSVFSRRRNASAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQ 395
           + L    +SVF+R   A AV+LVASQKTLPV+VAVVEQL GALGESGLLV+PCVAAHI Q
Sbjct: 348 SRLEQRGVSVFARNEYARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQ 407

[Close]

BLAST of HG10000197 vs. ExPASy Swiss-Prot
Match: Q6ESG1 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.2e-97
Identity = 207/382 (54.19%), Postives = 258/382 (67.54%), Query Frame = 0


Query: 45  LNRKRQIFSPIRACG--LPDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLAL 104
           L R R + +   A G   PD   DG +   PA  S S        AL  FA +NFLPLAL
Sbjct: 48  LRRLRPLRAAAAAAGGASPDGA-DGAKRPAPAAASSSLG-----AALVGFARSNFLPLAL 107

Query: 105 VTGVALGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASI 164
           + G+AL + +P+LGCLA +Y LSK+STFGIF+ISGLTLRT E+ A++EAWP  ++GLASI
Sbjct: 108 IAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAWPAGLFGLASI 167

Query: 165 LLLTPYFSRLILQIHLQPQEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISN 224
           LL TP+ ++ I+QI   P EF+TGLA+F CMPTTLSSGV LTQL GGN+ALALAMT ISN
Sbjct: 168 LLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTALALAMTAISN 227

Query: 225 MLGILAIPFSISKFIADGVGIAVPTKELLRSLVLILLIPLIFGK---------------- 284
           +LGI+ +P S++K+I  G G+++PT++L +SLV  LLIP+I GK                
Sbjct: 228 LLGIMIVPLSLAKYIGVGAGVSLPTEKLFKSLVTTLLIPIILGKVARETSKGIAGFVDGN 287

Query: 285 --------------VPWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTL 344
                         VPW+QVSRSRSLLL V+P+ F  A+ +G  LH  LLAFNA  +  L
Sbjct: 288 KQGFSVTSAILLSLVPWIQVSRSRSLLLSVQPKAFAVAVTVGVLLHFALLAFNAAALHIL 347

Query: 345 AALSGGNMSVFSRRRNASAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQ 395
           + L    +SVF+R   A AV+LVASQKTLPV+VAVVEQL GALGESGLLV+PCVAAHI Q
Sbjct: 348 SRLEQRGVSVFARNEYARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQ 407

[Close]

BLAST of HG10000197 vs. ExPASy Swiss-Prot
Match: O34524 (Uncharacterized sodium-dependent transporter YocS OS=Bacillus subtilis (strain 168) OX=224308 GN=yocS PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 9.9e-04
Identity = 54/183 (29.51%), Postives = 87/183 (47.54%), Query Frame = 0


Query: 89  LSTFANNNFLPLALVTGVALGVANPSLGCLADRYYLSKFSTFGIFVI---SGLTLRTSEI 148
           +S FA   F    +V  V LG + PSL       ++S + T  + +I    GLTL+  + 
Sbjct: 7   ISHFAGQTFGIWVIVFAV-LGFSFPSLFT-----WISSYITIFLGIIMFGMGLTLQADDF 66

Query: 149 SASV-EAWPVAVYGLASILLLTPYFSRLILQIHLQPQEFVTGLAIFTCMPTTLSSGVALT 208
              V + W V +  +A   ++      L   +HL P E   G+ +  C P   +S V +T
Sbjct: 67  KELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHL-PAEIAVGVILVGCCPGGTASNV-MT 126

Query: 209 QLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVGIAVPTKELLRSLVLILLIPLIF 268
            LA GN+AL++A+T IS +L  +  P  I  F  +   + V    L  S++  +L P+I 
Sbjct: 127 FLAKGNTALSVAVTTISTLLAPVVTPLLIMLFAKE--WLPVSPGSLFISILQAVLFPIIA 179

[Close]

BLAST of HG10000197 vs. ExPASy TrEMBL
Match: A0A0A0LN64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.4e-186
Identity = 359/426 (84.27%), Postives = 374/426 (87.79%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL+ LLV SHRSNPP F FQIS FSSN ALL ++SLALNRKR+ + PIRACGL
Sbjct: 3   MAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEP  VSGS+ RVSWFE LSTFANNNFLPLALVTGVA+GVANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHLQP
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLQP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGIAVPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRMLFPRISAILLSLVPWM 302

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKP+IFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RRN S
Sbjct: 303 QVSRSRSLLLMVKPKIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRRNVS 362

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHI+QIIIDSFLVNFW  SDD+S
Sbjct: 363 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIVQIIIDSFLVNFWFTSDDSS 422

[Close]

BLAST of HG10000197 vs. ExPASy TrEMBL
Match: A0A5D3DKR1 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00180 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.3e-184
Identity = 361/426 (84.74%), Postives = 372/426 (87.32%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL    VSSHRSNPP F FQIS FS N ALLR++SLALNRKRQ +SPIRACGL
Sbjct: 3   MAFVGTKSL--FHVSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRVSW E LSTFANNNFLPLALVTGVA+G+ANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHL P
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLHP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGIAVPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRKLFPRISAILLSLVPWM 302

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKPEIFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RRN S
Sbjct: 303 QVSRSRSLLLMVKPEIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRRNVS 362

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHIIQIIIDSFLVNFW  SD +S
Sbjct: 363 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGSS 422

[Close]

BLAST of HG10000197 vs. ExPASy TrEMBL
Match: A0A1S3C366 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.3e-184
Identity = 361/426 (84.74%), Postives = 372/426 (87.32%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL    VSSHRSNPP F FQIS FS N ALLR++SLALNRKRQ +SPIRACGL
Sbjct: 3   MAFVGTKSL--FHVSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRVSW E LSTFANNNFLPLALVTGVA+G+ANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHL P
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLHP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK------------------------------VPWM 300
           VGIAVPTKELLRSLVLILLIPLIFGK                              VPWM
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKILRESFKGVADFVDGNRKLFPRISAILLSLVPWM 302

Query: 301 QVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNAS 360
           QVSRSRSLLLMVKPEIFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RRN S
Sbjct: 303 QVSRSRSLLLMVKPEIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRRNVS 362

Query: 361 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTS 397
           AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHIIQIIIDSFLVNFW  SD +S
Sbjct: 363 AVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGSS 422

[Close]

BLAST of HG10000197 vs. ExPASy TrEMBL
Match: A0A5A7TB17 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00080 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 5.0e-184
Identity = 361/429 (84.15%), Postives = 372/429 (86.71%), Query Frame = 0


Query: 1   MALVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGL 60
           MA VGTKSL    VSSHRSNPP F FQIS FS N ALLR++SLALNRKRQ +SPIRACGL
Sbjct: 3   MAFVGTKSL--FHVSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 61  PDKKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLAD 120
           PDKKDDGGRINEPA VSGS+NRVSW E LSTFANNNFLPLALVTGVA+G+ANPSLGCLAD
Sbjct: 63  PDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCLAD 122

Query: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLILQIHL P
Sbjct: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHLHP 182

Query: 181 QEFVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADG 240
           QEFVTGLAIF+CMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIA G
Sbjct: 183 QEFVTGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIAAG 242

Query: 241 VGIAVPTKELLRSLVLILLIPLIFGK---------------------------------V 300
           VGIAVPTKELLRSLVLILLIPLIFGK                                 V
Sbjct: 243 VGIAVPTKELLRSLVLILLIPLIFGKLLFFFVIFISGVADFVDGNRKLFPRISAILLSLV 302

Query: 301 PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRR 360
           PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLH+ LLAFNALGIRTLAA SGGN SVFS+RR
Sbjct: 303 PWMQVSRSRSLLLMVKPEIFLAAIGMGTFLHIALLAFNALGIRTLAAFSGGNKSVFSKRR 362

Query: 361 NASAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASD 397
           N SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPC+AAHIIQIIIDSFLVNFW  SD
Sbjct: 363 NVSAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSD 422

[Close]

BLAST of HG10000197 vs. ExPASy TrEMBL
Match: A0A6J1C1Q3 (probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006618 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.9e-175
Identity = 342/424 (80.66%), Postives = 361/424 (85.14%), Query Frame = 0


Query: 3   LVGTKSLHGLLVSSHRSNPPPFCFQISRFSSNGALLRTSSLALNRKRQIFSPIRACGLPD 62
           + GT+SLH  L SS RSNP  F  QISR SSNG+LLRTSS+ LN KRQIF PIRACGLPD
Sbjct: 1   MAGTQSLHSFLFSSPRSNPLAFRLQISRLSSNGSLLRTSSIDLNHKRQIFRPIRACGLPD 60

Query: 63  KKDDGGRINEPAGVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLADRY 122
           KKD+GGRINEP GV GS N V WF+ALS F ++NFLPLALVT VA G ANPSLGCLADRY
Sbjct: 61  KKDEGGRINEPTGVLGSGNEVIWFKALSNFVDDNFLPLALVTAVAAGFANPSLGCLADRY 120

Query: 123 YLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQPQE 182
           YLSKFST GIFV+SGLTLRT+EISASVEAWPVAVYGLASILLLTPYFSRLILQIHL PQE
Sbjct: 121 YLSKFSTVGIFVVSGLTLRTAEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLHPQE 180

Query: 183 FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVG 242
           FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKF+ADGVG
Sbjct: 181 FVTGLAIFTCMPTTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFVADGVG 240

Query: 243 IAVPTKELLRSLVLILLIPLIFGK------------------------------VPWMQV 302
           I VPTKEL RSLVL+LLIPLIFGK                              VPWMQV
Sbjct: 241 ITVPTKELFRSLVLMLLIPLIFGKILRESFKGVADFVDENRKLFPRINAILLSLVPWMQV 300

Query: 303 SRSRSLLLMVKPEIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNASAV 362
           S+SRSLLLMVKPE FL AIGMGTFLHL+LLAFNALGIR LAA+SGG+ SVFSRRRNASAV
Sbjct: 301 SKSRSLLLMVKPEAFLVAIGMGTFLHLSLLAFNALGIRILAAVSGGSQSVFSRRRNASAV 360

Query: 363 LLVASQKTLPVMVAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWLASDDTSNN 397
           LLVASQKTLPVMVAVVEQLRGALG+SGLLVLPCVAAHIIQIIIDSFLVNFW  SDD+SNN
Sbjct: 361 LLVASQKTLPVMVAVVEQLRGALGKSGLLVLPCVAAHIIQIIIDSFLVNFWPRSDDSSNN 420

[Close]

BLAST of HG10000197 vs. TAIR 10
Match: AT3G56160.1 (Sodium Bile acid symporter family )

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-105
Identity = 214/351 (60.97%), Postives = 263/351 (74.93%), Query Frame = 0


Query: 75  GVSGSKNRVSWFEALSTFANNNFLPLALVTGVALGVANPSLGCLADRYYLSKFSTFGIFV 134
           G+S S  R+ + + L +FA++NFLPLALV+GV LG ANP+LGCLAD+Y  +K ST GIF+
Sbjct: 87  GISASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFI 146

Query: 135 ISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQPQEFVTGLAIFTCMP 194
           ISGLTLRT  I A+V+ WP+ ++GL SILLLTP FSRLI+ + LQP+E VTGL IF CMP
Sbjct: 147 ISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGLGIFCCMP 206

Query: 195 TTLSSGVALTQLAGGNSALALAMTVISNMLGILAIPFSISKFIADGVGIAVPTKELLRSL 254
           TTLSSGVALT LAGGN+ALALA+TV SN+LGIL IPF +S++IA GVG++ PT +L RSL
Sbjct: 207 TTLSSGVALTHLAGGNAALALAVTVASNLLGILTIPFWVSRYIAGGVGVSFPTDQLFRSL 266

Query: 255 VLILLIPLIFGK------------------------------VPWMQVSRSRSLLLMVKP 314
           ++ LLIPLI GK                              VPW+QVSRSRSLLL V+P
Sbjct: 267 IVTLLIPLIIGKVIRESFKGFANFVDNNRKLFSKINAICLSLVPWIQVSRSRSLLLSVQP 326

Query: 315 EIFLAAIGMGTFLHLTLLAFNALGIRTLAALSGGNMSVFSRRRNASAVLLVASQKTLPVM 374
           ++FLAA+G+G  LHL+LLAFNA+ IR L+ L+GG+    S + N++AVLLV+SQKTLPVM
Sbjct: 327 KVFLAAVGIGILLHLSLLAFNAVSIRILSGLTGGSK---SSKENSTAVLLVSSQKTLPVM 386

Query: 375 VAVVEQLRGALGESGLLVLPCVAAHIIQIIIDSFLVNFWL-ASDDTSNNVK 395
           VAVVEQL GA GE+GLLVLPCVAAH+ QI+IDS LVN WL    DTS  VK
Sbjct: 387 VAVVEQLGGAFGETGLLVLPCVAAHLNQIMIDSVLVNLWLRRGKDTSTKVK 434

The following BLAST results are available for this feature:

BLAST of HG10000197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900991.1	2.3e-191	86.85	probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida...	[more]
XP_004151888.1	1.1e-185	84.27	probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] ...	[more]
XP_008455871.1	4.6e-184	84.74	PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform...	[more]
KAA0040654.1	1.0e-183	84.15	putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa]	[more]
XP_022134333.1	3.9e-175	80.66	probable sodium/metabolite cotransporter BASS4, chloroplastic [Momordica charant...	[more]

BLAST of HG10000197 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IZC4	1.7e-104	60.97	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis tha...	[more]
B8AJ09	1.2e-97	54.19	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]
Q6ESG1	1.2e-97	54.19	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]
O34524	9.9e-04	29.51	Uncharacterized sodium-dependent transporter YocS OS=Bacillus subtilis (strain 1...	[more]

BLAST of HG10000197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN64	5.4e-186	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1	[more]
A0A5D3DKR1	2.3e-184	84.74	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C366	2.3e-184	84.74	probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucu...	[more]
A0A5A7TB17	5.0e-184	84.15	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1C1Q3	1.9e-175	80.66	probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Momordica chara...	[more]

BLAST of HG10000197 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56160.1	1.2e-105	60.97	Sodium Bile acid symporter family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 80..385 e-value: 7.2E-40 score: 138.9
IPR016833	Putative sodium bile acid cotransporter	PFAM	PF13593	SBF_like	coord: 98..267 e-value: 4.1E-28 score: 98.6
IPR016833	Putative sodium bile acid cotransporter	PANTHER	PTHR18640	SOLUTE CARRIER FAMILY 10 MEMBER 7	coord: 267..394
IPR016833	Putative sodium bile acid cotransporter	PANTHER	PTHR18640	SOLUTE CARRIER FAMILY 10 MEMBER 7	coord: 31..267
None	No IPR available	PANTHER	PTHR18640:SF12	SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED	coord: 31..267
None	No IPR available	PANTHER	PTHR18640:SF12	SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED	coord: 267..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000197.1	HG10000197.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane