HG10000092 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000092
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	glucan endo-1,3-beta-glucosidase 1
Location	Chr09: 881498 .. 882034 (+)
RNA-Seq Expression	HG10000092
Synteny	HG10000092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTCTGTTGACTAAAACACTGCTCATTCTGCTGTTACTCTCAACAATTCACCATAATGCAGGTAACAACCAATGCCCATTTGAAATTTCATGTCAATAAATACTTTAGTTCCAAATAATCAATTTTTCTTTTTACATTGAATGGATTGGATGGTGCATCAGAGAAGTTTGTTTCCAGATTTATGTGAATATGTCCACCAACTGTTTGTTAAAATGTCTAGGTGGGGAGTTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGACGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAATGGGAGGTGCTAACTGCAGCAAGATCCAAACAAACCAGCCTTGTTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAACACCTACTTTCAGAGCTTCAAGCATCAAGGTGGATCCTGCTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTAAGCCACATTTTTACTGTCTACCATATCTAATTTATGATTCTCTTTCTTTCTGGTAA

mRNA sequence

ATGGTTGCTCTGTTGACTAAAACACTGCTCATTCTGCTGTTACTCTCAACAATTCACCATAATGCAGGTGGGGAGTTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGACGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAATGGGAGGTGCTAACTGCAGCAAGATCCAAACAAACCAGCCTTGTTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAACACCTACTTTCAGAGCTTCAAGCATCAAGGTGGATCCTGCTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTAAGCCACATTTTTACTGTCTACCATATCTAATTTATGATTCTCTTTCTTTCTGGTAA

Coding sequence (CDS)

ATGGTTGCTCTGTTGACTAAAACACTGCTCATTCTGCTGTTACTCTCAACAATTCACCATAATGCAGGTGGGGAGTTTGAGCAATGGTGTGTAGCAGATGAGCAGACCCCAGACGATGAATTACAAATGGCTTTGGATTGGGCATGTGGAATGGGAGGTGCTAACTGCAGCAAGATCCAAACAAACCAGCCTTGTTTTAACCCAAATACAGTGAAAGACCATGCTTCATTTGCCTTCAACACCTACTTTCAGAGCTTCAAGCATCAAGGTGGATCCTGCTTCTTCAAAGGAGCTGCCATCATTACAGAGCTTGATCCTAGTAAGCCACATTTTTACTGTCTACCATATCTAATTTATGATTCTCTTTCTTTCTGGTAA

Protein sequence

MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPSKPHFYCLPYLIYDSLSFW

Homology

[Close]

BLAST of HG10000092 vs. NCBI nr
Match: KAA0046037.1 (glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo var. makuwa] >TYK11917.1 glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 2.7e-53
Identity = 103/111 (92.79%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLLILLLLSTIH N GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLILLLLSTIHQNTGGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPSKPHF 112
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPSK HF
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSKLHF 111

[Close]

BLAST of HG10000092 vs. NCBI nr
Match: XP_004140010.1 (glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLL+LLLLSTIH N GGEFEQWCVADEQTPDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPS
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPS 107

[Close]

BLAST of HG10000092 vs. NCBI nr
Match: XP_008464180.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 100/107 (93.46%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLLILLLLSTIH N GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLILLLLSTIHQNTGGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPS
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPS 107

[Close]

BLAST of HG10000092 vs. NCBI nr
Match: KAG7026987.1 (Glucan endo-1,3-beta-glucosidase 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 99/116 (85.34%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MVALLTKTL--LILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSK 60
           M AL T TL  L LL LSTI H AGGEFEQWC+ADEQTPDDELQMALDWACG GG NCSK
Sbjct: 1   MAALWTGTLLTLALLFLSTIQHKAGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSK 60

Query: 61  IQTNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPSKPHFYCL 115
           IQ NQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSKPHF+ L
Sbjct: 61  IQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSKPHFHFL 116

[Close]

BLAST of HG10000092 vs. NCBI nr
Match: XP_038902204.1 (glucan endo-1,3-beta-glucosidase 12-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 6.2e-50
Identity = 97/107 (90.65%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALL+KTLLILLLLSTIH N GGEFEQWC+ADEQ PDDELQ ALDWACG GGANCSKIQ
Sbjct: 1   MVALLSKTLLILLLLSTIHQNTGGEFEQWCIADEQIPDDELQTALDWACGNGGANCSKIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            +QPCF+PNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS
Sbjct: 61  PDQPCFDPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 107

[Close]

BLAST of HG10000092 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 17  TIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHAS 76
           TI    GG  ++WC+A  Q    ELQ ALDWACG G  +CS +Q +QPCF P+TV  HAS
Sbjct: 379 TIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHAS 438

Query: 77  FAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
           +AFNTY+Q        C F GA++  + DPS
Sbjct: 439 YAFNTYYQQSGASSIDCSFNGASVEVDKDPS 469

[Close]

BLAST of HG10000092 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 45/79 (56.96%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 29  WCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHASFAFNTYFQSFKH 88
           +CVA     DD+L   L+WACG G ANC+ IQ  QPC+ PN VK HASFAFN Y+Q  K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 89  QGGSCFFKGAAIITELDPS 108
            GG+C F G AI T  DPS
Sbjct: 422 AGGTCDFDGTAITTTRDPS 440

[Close]

BLAST of HG10000092 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 98.6 bits (244), Expect = 5.3e-20
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 18  IHHNAGGEF-------EQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNT 77
           +H +  G F       + +C+A +      LQ ALDWACG G +NCS+IQ  + C+ PN 
Sbjct: 363 LHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNN 422

Query: 78  VKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPSKPHFYCL 115
           VK HASFAFN+Y+Q      GSC FKG A+IT  DPS  H  C+
Sbjct: 423 VKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPS--HGSCI 464

[Close]

BLAST of HG10000092 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-19
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 21  NAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHASFAFN 80
           N+ G    WC+A  +  + +L+ ALDWACG G  +C+ IQ +QPCF P+T+  HASF FN
Sbjct: 361 NSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFN 420

Query: 81  TYFQSFKHQGGSCFFKGAAIITELDPS 108
           +YFQ  +    +C F GA +    DPS
Sbjct: 421 SYFQQNRATDVACSFGGAGVKVNKDPS 447

[Close]

BLAST of HG10000092 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-16
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 9   LLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNP 68
           +L+++LL+   H++G     WCV  E   +  LQ  LD+ACG  GA+C  I    PCFNP
Sbjct: 5   VLVMILLAMAGHSSG----TWCVCKEGLSEAMLQKTLDYACG-AGADCGPIHQTGPCFNP 64

Query: 69  NTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
           NTVK H S+A N++FQ      G+C F G A  +  DPS
Sbjct: 65  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPS 98

[Close]

BLAST of HG10000092 vs. ExPASy TrEMBL
Match: A0A5A7TVX0 (Glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00840 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 103/111 (92.79%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLLILLLLSTIH N GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLILLLLSTIHQNTGGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPSKPHF 112
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPSK HF
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPSKLHF 111

[Close]

BLAST of HG10000092 vs. ExPASy TrEMBL
Match: A0A0A0KDX6 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G110840 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLL+LLLLSTIH N GGEFEQWCVADEQTPDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLVLLLLSTIHQNTGGEFEQWCVADEQTPDDELQMALDWACGRGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPS
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPS 107

[Close]

BLAST of HG10000092 vs. ExPASy TrEMBL
Match: A0A1S3CKX6 (glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502123 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 100/107 (93.46%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQ 60
           MVALLTKTLLILLLLSTIH N GGEFEQWCVADEQ PDDELQMALDWACG GGANCS IQ
Sbjct: 1   MVALLTKTLLILLLLSTIHQNTGGEFEQWCVADEQIPDDELQMALDWACGKGGANCSSIQ 60

Query: 61  TNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            NQPCFNPNTVKDHASFAFN YFQSFKHQGGSCFFKGAAIITELDPS
Sbjct: 61  PNQPCFNPNTVKDHASFAFNNYFQSFKHQGGSCFFKGAAIITELDPS 107

[Close]

BLAST of HG10000092 vs. ExPASy TrEMBL
Match: A0A6J1I7Q3 (glucan endo-1,3-beta-glucosidase 12 OS=Cucurbita maxima OX=3661 GN=LOC111469899 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 95/109 (87.16%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MVALLTKTL--LILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSK 60
           M AL T TL  L LLLLSTI H AGGEFEQWC+ADEQTPDDELQMALDWACG GG NCSK
Sbjct: 1   MAALWTGTLLTLALLLLSTIQHKAGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSK 60

Query: 61  IQTNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
           IQ NQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPS
Sbjct: 61  IQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPS 109

[Close]

BLAST of HG10000092 vs. ExPASy TrEMBL
Match: A0A6J1G6V9 (glucan endo-1,3-beta-glucosidase 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451375 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 95/109 (87.16%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MVALLTKTL--LILLLLSTIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSK 60
           M AL T TL  L LLLLSTI H AGGEFEQWC+ADEQTPDDELQMALDWACG GG NCSK
Sbjct: 1   MAALWTGTLLTLALLLLSTIQHKAGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSK 60

Query: 61  IQTNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
           IQ NQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPS
Sbjct: 61  IQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPS 109

[Close]

BLAST of HG10000092 vs. TAIR 10
Match: AT5G35740.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-38
Identity = 72/109 (66.06%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MVALLTKTLLILLLLS-TIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKI 60
           M   L + LL LL+++ T+   +  E EQWC+ADEQTPDDELQ ALDWACG GGA+CSK+
Sbjct: 1   MSTFLIRILLPLLIIAMTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKM 60

Query: 61  -QTNQPCFNPNTVKDHASFAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
            Q NQPCF PNT++DHASFAFN+Y+Q++K++GGSC+FKGAA+ITELDPS
Sbjct: 61  QQENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPS 109

[Close]

BLAST of HG10000092 vs. TAIR 10
Match: AT2G04910.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 59/99 (59.60%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 22  AGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHASFAFNT 81
           A  EF QWCVAD Q PD+ +Q A+DWAC  GGA+CS IQ NQPCF PNTVKDHAS  FN 
Sbjct: 8   AKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNN 67

Query: 82  YFQSFKHQGGSCFFKGAAIITELDPSKPHF---YCLPYL 118
           Y+Q +K  GGSC F   A IT+ DPSK  +   +C  YL
Sbjct: 68  YYQRYKRNGGSCNFNSTAFITQTDPSKQLYLNPFCYSYL 106

[Close]

BLAST of HG10000092 vs. TAIR 10
Match: AT2G04910.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 5.8e-30
Identity = 58/97 (59.79%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 22  AGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHASFAFNT 81
           A  EF QWCVAD Q PD+ +Q A+DWAC  GGA+CS IQ NQPCF PNTVKDHAS  FN 
Sbjct: 8   AKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNN 67

Query: 82  YFQSFKHQGGSCFFKGAAIITELDPSKP--HFYCLPY 117
           Y+Q +K  GGSC F   A IT+ DPS    HF  +P+
Sbjct: 68  YYQRYKRNGGSCNFNSTAFITQTDPSHDSCHFEYVPF 104

[Close]

BLAST of HG10000092 vs. TAIR 10
Match: AT4G29360.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 17  TIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHAS 76
           TI    GG  ++WC+A  Q    ELQ ALDWACG G  +CS +Q +QPCF P+TV  HAS
Sbjct: 379 TIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHAS 438

Query: 77  FAFNTYFQSFKHQGGSCFFKGAAIITELDPSK 109
           +AFNTY+Q        C F GA++  + DPSK
Sbjct: 439 YAFNTYYQQSGASSIDCSFNGASVEVDKDPSK 470

[Close]

BLAST of HG10000092 vs. TAIR 10
Match: AT4G29360.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 104.0 bits (258), Expect = 9.0e-23
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 17  TIHHNAGGEFEQWCVADEQTPDDELQMALDWACGMGGANCSKIQTNQPCFNPNTVKDHAS 76
           TI    GG  ++WC+A  Q    ELQ ALDWACG G  +CS +Q +QPCF P+TV  HAS
Sbjct: 379 TIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHAS 438

Query: 77  FAFNTYFQSFKHQGGSCFFKGAAIITELDPS 108
           +AFNTY+Q        C F GA++  + DPS
Sbjct: 439 YAFNTYYQQSGASSIDCSFNGASVEVDKDPS 469

The following BLAST results are available for this feature:

BLAST of HG10000092 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046037.1	2.7e-53	92.79	glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo var. makuwa] >TYK11...	[more]
XP_004140010.1	6.6e-52	93.46	glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus]	[more]
XP_008464180.1	2.5e-51	93.46	PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo]	[more]
KAG7026987.1	2.1e-50	85.34	Glucan endo-1,3-beta-glucosidase 4, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038902204.1	6.2e-50	90.65	glucan endo-1,3-beta-glucosidase 12-like [Benincasa hispida]	[more]

BLAST of HG10000092 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYE5	1.3e-21	49.45	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
Q94CD8	1.4e-20	56.96	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
O65399	5.3e-20	46.15	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q9FJU9	4.5e-19	44.83	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]
Q9FZ86	2.1e-16	43.43	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]

BLAST of HG10000092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVX0	1.3e-53	92.79	Glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KDX6	3.2e-52	93.46	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G110840 PE=4 SV=...	[more]
A0A1S3CKX6	1.2e-51	93.46	glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1I7Q3	1.1e-47	87.16	glucan endo-1,3-beta-glucosidase 12 OS=Cucurbita maxima OX=3661 GN=LOC111469899 ...	[more]
A0A6J1G6V9	1.1e-47	87.16	glucan endo-1,3-beta-glucosidase 12-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of HG10000092 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35740.1	3.4e-38	66.06	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	1.5e-30	59.60	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.2	5.8e-30	59.79	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.2	1.8e-23	50.00	O-Glycosyl hydrolases family 17 protein	[more]
AT4G29360.1	9.0e-23	49.45	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..115 e-value: 2.2E-40 score: 150.2
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 28..99 e-value: 1.1E-21 score: 77.3
None	No IPR available	GENE3D	1.20.58.1040		coord: 25..115 e-value: 1.3E-10 score: 43.6
None	No IPR available	PANTHER	PTHR31044:SF35	CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN	coord: 5..109
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 5..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000092.1	HG10000092.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0016787	hydrolase activity