HG10000082 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000082
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr09: 704314 .. 705924 (+)
RNA-Seq ExpressionHG10000082
SyntenyHG10000082
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTTTACTATTTCGTAGATTTTCCACTCTGCTGGGCTCTGTAGCCAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATCCAATTCCAATACCTCACCGATCAATCCCCGAACCCAGAGGACAGGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAGTGAAACACATTCTACTGAAAACCCAGAAGGACTATGTACTTTCTCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATTATCCTCCATATACTTGCTAAATATAGAAAATTTAAATCTGCAGAATCAATTTTGAGGAGTATCATAGAATCGTGTTCTATTGACTTTCCTTCTAAGTTGTTTGAATCCTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCGCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGTTTTTTACCCACTGTGGAGTCATGTAATGCATTTCTTAGCTCCTTGCTTAAATTCAACAGGAGCCATATTGCATTGGCATTTTATCGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACACTCAACTTGGTTATGTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGGGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTGCCGGGTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAAAAAAATGGAGTTCCTCCAAATGATGTTACATTTAGTACGCTTATCAATGGATTCTGCAAGAATGGGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAGTTTATCTCCTTCTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTGGGCAATGGTGAGATGGGCAATAGACTTTTCGAAGAGATGTCGAGGCTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATCTTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCGACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCGTGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGTGAGAATGAGGATTATGATGGAGCAGTCCAATTATTGAAGGAAATGTTGAAGAGTCGCAAGGCTCCTGATTTGAATAACTTATATGAGTTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCAGTGAGTTGGAAGCTCAACATCTCTTGCCAGATGGTTTTGACAAACTCAAAGCGTTCGATTTGTTGCACAATAACGAAGATGCATTTGGATAG

mRNA sequence

ATGAGGTTTTTACTATTTCGTAGATTTTCCACTCTGCTGGGCTCTGTAGCCAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATCCAATTCCAATACCTCACCGATCAATCCCCGAACCCAGAGGACAGGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAGTGAAACACATTCTACTGAAAACCCAGAAGGACTATGTACTTTCTCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATTATCCTCCATATACTTGCTAAATATAGAAAATTTAAATCTGCAGAATCAATTTTGAGGAGTATCATAGAATCGTGTTCTATTGACTTTCCTTCTAAGTTGTTTGAATCCTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCGCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGTTTTTTACCCACTGTGGAGTCATGTAATGCATTTCTTAGCTCCTTGCTTAAATTCAACAGGAGCCATATTGCATTGGCATTTTATCGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACACTCAACTTGGTTATGTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGGGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTGCCGGGTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAAAAAAATGGAGTTCCTCCAAATGATGTTACATTTAGTACGCTTATCAATGGATTCTGCAAGAATGGGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAGTTTATCTCCTTCTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTGGGCAATGGTGAGATGGGCAATAGACTTTTCGAAGAGATGTCGAGGCTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATCTTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCGACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCGTGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGTGAGAATGAGGATTATGATGGAGCAGTCCAATTATTGAAGGAAATGTTGAAGAGTCGCAAGGCTCCTGATTTGAATAACTTATATGAGTTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCAGTGAGTTGGAAGCTCAACATCTCTTGCCAGATGGTTTTGACAAACTCAAAGCGTTCGATTTGTTGCACAATAACGAAGATGCATTTGGATAG

Coding sequence (CDS)

ATGAGGTTTTTACTATTTCGTAGATTTTCCACTCTGCTGGGCTCTGTAGCCAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATCCAATTCCAATACCTCACCGATCAATCCCCGAACCCAGAGGACAGGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAGTGAAACACATTCTACTGAAAACCCAGAAGGACTATGTACTTTCTCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATTATCCTCCATATACTTGCTAAATATAGAAAATTTAAATCTGCAGAATCAATTTTGAGGAGTATCATAGAATCGTGTTCTATTGACTTTCCTTCTAAGTTGTTTGAATCCTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCGCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGTTTTTTACCCACTGTGGAGTCATGTAATGCATTTCTTAGCTCCTTGCTTAAATTCAACAGGAGCCATATTGCATTGGCATTTTATCGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACACTCAACTTGGTTATGTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGGGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTGCCGGGTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAAAAAAATGGAGTTCCTCCAAATGATGTTACATTTAGTACGCTTATCAATGGATTCTGCAAGAATGGGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAGTTTATCTCCTTCTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTGGGCAATGGTGAGATGGGCAATAGACTTTTCGAAGAGATGTCGAGGCTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATCTTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCGACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCGTGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGTGAGAATGAGGATTATGATGGAGCAGTCCAATTATTGAAGGAAATGTTGAAGAGTCGCAAGGCTCCTGATTTGAATAACTTATATGAGTTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCAGTGAGTTGGAAGCTCAACATCTCTTGCCAGATGGTTTTGACAAACTCAAAGCGTTCGATTTGTTGCACAATAACGAAGATGCATTTGGATAG

Protein sequence

MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVVHSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYTLNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAFG
Homology
BLAST of HG10000082 vs. NCBI nr
Match: XP_038900606.1 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Benincasa hispida])

HSP 1 Score: 991.9 bits (2563), Expect = 2.2e-285
Identity = 489/534 (91.57%), Postives = 512/534 (95.88%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL +RRFSTLLGSVARTSASVNPKLDVSLGKRNW  IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPYRRFSTLLGSVARTSASVNPKLDVSLGKRNWKSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQ+DYVLSLEFFNWVSTQNPSS TLETHCI
Sbjct: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQRDYVLSLEFFNWVSTQNPSSLTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHILAK+RKFKSAESILRS+IESCS+DFPSKLFESLLYSYRLCDSS HVFDLLFKTFAH
Sbjct: 121 ILHILAKHRKFKSAESILRSMIESCSVDFPSKLFESLLYSYRLCDSSRHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLL FNR  IALAFY EMRRSRISPN YT
Sbjct: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLNFNRGDIALAFYGEMRRSRISPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LN+V+CASCKLGRLD+AT VFEEMGTMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNMVICASCKLGRLDQATQVFEEMGTMGFSPNVASYNTLISGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFCK+GKLQEASKLFGEMKGMSLSP+T+TYNILINGY+KVGNGE
Sbjct: 301 KNGVPPDVVTFNTLINGFCKDGKLQEASKLFGEMKGMSLSPTTITYNILINGYNKVGNGE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVKADILTYNALILGLCKEGKTKKAAYLV+ELDEKSLVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKSLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YG+CV KKSERAFQIYK MIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEML+  KA
Sbjct: 421 YGECVQKKSERAFQIYKCMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLRRHKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDA 535
           P LNNLYE CAGLG+CGKVQTAI+LCSELEAQHLLP+G DKLKAF LLH+N+DA
Sbjct: 481 PYLNNLYELCAGLGQCGKVQTAILLCSELEAQHLLPEGLDKLKAFGLLHDNKDA 534

BLAST of HG10000082 vs. NCBI nr
Match: XP_008464167.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis melo])

HSP 1 Score: 966.1 bits (2496), Expect = 1.3e-277
Identity = 478/535 (89.35%), Postives = 500/535 (93.46%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAF 536
           PD+NNLYE CAGLG+CGKV+TAIMLCSELEAQ LLP+GFDKLKAF LLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

BLAST of HG10000082 vs. NCBI nr
Match: KAA0060788.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.4 bits (2489), Expect = 8.3e-277
Identity = 478/536 (89.18%), Postives = 500/536 (93.28%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAFG 537
           PD+NNLYE CAGLG+ GKV+TAIMLCSELEAQ LLP+GFDKLKAF LLH+N+DAFG
Sbjct: 481 PDVNNLYELCAGLGQGGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAFG 536

BLAST of HG10000082 vs. NCBI nr
Match: XP_004140069.1 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis sativus] >KGN46601.1 hypothetical protein Csa_005178 [Cucumis sativus])

HSP 1 Score: 961.8 bits (2485), Expect = 2.4e-276
Identity = 476/536 (88.81%), Postives = 501/536 (93.47%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS++PK D+SLGKRN + IPIPHRSIPEPRG DLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+GLTAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFC+MKDYGFLPTVESCNA+LSSLL F+R  IALAFYREMRRSRI PN YT
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA VVFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRS ME
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TL+NGFCK GKLQEASKLFGEMKGMSLSP+TVTYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVKADILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS F PCDQTFRMLLSTFCENEDYDGAVQLL+EML   KA
Sbjct: 421 YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAFG 537
           PD+NNLYE CAGLG+CGKV+TA+MLCSELEAQ LLP+GFDKLKAF LL +N+DAFG
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNKDAFG 536

BLAST of HG10000082 vs. NCBI nr
Match: TYK11943.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 953.7 bits (2464), Expect = 6.6e-274
Identity = 472/528 (89.39%), Postives = 494/528 (93.56%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLL 529
           PD+NNLYE CAGLG+CGKV+TAIMLCSELEAQ LLP+GFDKLKAF++L
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFEIL 528

BLAST of HG10000082 vs. ExPASy Swiss-Prot
Match: Q9SZ10 (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 2.5e-175
Identity = 309/514 (60.12%), Postives = 387/514 (75.29%), Query Frame = 0

Query: 7   RRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVVHSHLIH 66
           RR      S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI 
Sbjct: 10  RRLRYQFSSFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQ 69

Query: 67  SDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILA 126
           SDW KL+ LS  L +FRVK++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L 
Sbjct: 70  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT 129

Query: 127 KYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRY 186
           K RKFKSAESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR 
Sbjct: 130 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRN 189

Query: 187 ASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYTLNLVMC 246
           A+DTF +MKDYGFLPTVESCNA++SSLL   R  IAL FYREMRR +ISPN YTLN+VM 
Sbjct: 190 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 249

Query: 247 ASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPP 306
             C+ G+LDK   + ++M  +GF    VSYNTLIAG+C KGLLSSA+KL++ M K+G+ P
Sbjct: 250 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 309

Query: 307 NDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLF 366
           N VTF+TLI+GFC+  KLQEASK+FGEMK ++++P+TVTYN LINGYS+ G+ EM  R +
Sbjct: 310 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 369

Query: 367 EEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVL 426
           E+M    ++ DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV 
Sbjct: 370 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 429

Query: 427 KKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNL 486
           K ++R F++YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++     D   +
Sbjct: 430 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 489

Query: 487 YEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFD 521
           ++ C GL   GK Q    L  E+E +  L + F+
Sbjct: 490 HQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520

BLAST of HG10000082 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.1e-65
Identity = 144/450 (32.00%), Postives = 239/450 (53.11%), Query Frame = 0

Query: 71  KLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSS-HTLETHCIILHILAKYR 130
           +L  LS   T     ++LLK+Q D  L L+F NW    NP    TL   CI LHIL K++
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA---NPHQFFTLRCKCITLHILTKFK 97

Query: 131 KFKSAESILRSI-IESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYAS 190
            +K+A+ +   +  ++   ++ S +F+SL  +Y LC S+  VFDL+ K+++ L     A 
Sbjct: 98  LYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 157

Query: 191 DTFCKMKDYGFLPTVESCNAFLSSLLKFNRS-HIALAFYREMRRSRISPNLYTLNLVMCA 250
                 + +GF+P V S NA L + ++  R+   A   ++EM  S++SPN++T N+++  
Sbjct: 158 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 217

Query: 251 SCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPN 310
            C  G +D A  +F++M T G  PNVV+YNTLI GYC    +    KL  +M   G+ PN
Sbjct: 218 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 277

Query: 311 DVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFE 370
            ++++ +ING C+ G+++E S +  EM     S   VTYN LI GY K GN      +  
Sbjct: 278 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 337

Query: 371 EMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLK 430
           EM R  +   ++TY +LI  +CK G   +A   + ++  + L PN  T++ L+ G     
Sbjct: 338 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 397

Query: 431 KSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLY 490
               A+++ + M  +GF P   T+  L++  C     + A+ +L++M +   +PD+ +  
Sbjct: 398 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 457

Query: 491 EFCAGLGRCGKVQTAIMLCSELEAQHLLPD 518
              +G  R   V  A+ +  E+  + + PD
Sbjct: 458 TVLSGFCRSYDVDEALRVKREMVEKGIKPD 484

BLAST of HG10000082 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-65
Identity = 145/443 (32.73%), Postives = 236/443 (53.27%), Query Frame = 0

Query: 82  FRVKH---ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILAKYRKFKSAESIL 141
           F+  H   +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++
Sbjct: 85  FKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLI 144

Query: 142 RSIIESCSIDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMK 201
            S  E   ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM 
Sbjct: 145 SSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKML 204

Query: 202 DYGFLPTVESCNAFLSSLLK-FNRSHIALAFYREMRRSRISPNLYTLNLVMCASCKLGRL 261
           +YG + +V+SCN +L+ L K   ++  A+  +RE     +  N+ + N+V+   C+LGR+
Sbjct: 205 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 264

Query: 262 DKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPNDVTFSTL 321
            +A  +   M   G++P+V+SY+T++ GYC  G L    KL   M++ G+ PN   + ++
Sbjct: 265 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 324

Query: 322 INGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFEEMSRLQV 381
           I   C+  KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +
Sbjct: 325 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 384

Query: 382 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSERAFQ 441
             D+LTY A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+
Sbjct: 385 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 444

Query: 442 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLYEFCAGLG 501
           ++  MI++G  P   T+  L+   C+  D D A +LL EM K    P++        GL 
Sbjct: 445 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 504

Query: 502 RCGKVQTAIMLCSELEAQHLLPD 518
           + G ++ A+ L  E EA  L  D
Sbjct: 505 KSGNIEEAVKLVGEFEAAGLNAD 525

BLAST of HG10000082 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.9e-58
Identity = 143/463 (30.89%), Postives = 231/463 (49.89%), Query Frame = 0

Query: 57  VNVVHSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLE 116
           V V+   +    W+KL      +    +   L+ ++ D  L L +++W+   +  S +LE
Sbjct: 43  VAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLE 102

Query: 117 THCIILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFK 176
               +LH LA  +++    S L   + + S      +F ++     +C +S  + D+L  
Sbjct: 103 LTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNS-IIADMLVL 162

Query: 177 TFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISP 236
            +A+  +F    + F +   YG+  +  SC   + +LLK NRS      Y+EM R +I P
Sbjct: 163 AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP 222

Query: 237 NLYTLNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYC---NKGLLSSAM 296
           N++T N+V+ A CK G+++KA  V E+M   G SPNVVSYNTLI GYC     G +  A 
Sbjct: 223 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 282

Query: 297 KLRSAMEKNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGY 356
            +   M +N V PN  TF+ LI+GF K+  L  + K+F EM    + P+ ++YN LING 
Sbjct: 283 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 342

Query: 357 SKVGNGEMGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNA 416
              G       + ++M    V+ +++TYNALI G CK    K+A  +   +  +  VP  
Sbjct: 343 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 402

Query: 417 STFSALIYGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKE 476
             ++ LI   C L K +  F + + M + G +P   T+  L++  C N + + A +L  +
Sbjct: 403 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-D 462

Query: 477 MLKSRKAPDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLP 517
            L S+  PDL   +    G  R G+ + A ML  E+    L P
Sbjct: 463 QLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

BLAST of HG10000082 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-56
Identity = 128/424 (30.19%), Postives = 223/424 (52.59%), Query Frame = 0

Query: 97  LSLEFFNWVSTQN--PSSHTLETHCIILHILAKYRKFKSAESILRSIIESCSIDFPSKLF 156
           L+L+F  WV  Q    + H ++  CI  HIL + R +  A  IL+ +  S      S +F
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVF 111

Query: 157 ESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLL 216
            +L+ +YRLC+S+P V+D+L + +      + + + F  M  YGF P+V +CNA L S++
Sbjct: 112 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 171

Query: 217 KFNRSHIALAFYREMRRSRISPNLYTLNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVV 276
           K        +F +EM + +I P++ T N+++   C  G  +K++ + ++M   G++P +V
Sbjct: 172 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 231

Query: 277 SYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEM 336
           +YNT++  YC KG   +A++L   M+  GV  +  T++ LI+  C++ ++ +   L  +M
Sbjct: 232 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 291

Query: 337 KGMSLSPSTVTYNILINGYSKVGNGEMGNRLFEEMSRLQVKADILTYNALILGLCKEGKT 396
           +   + P+ VTYN LING+S  G   + ++L  EM    +  + +T+NALI G   EG  
Sbjct: 292 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 351

Query: 397 KKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRML 456
           K+A  +   ++ K L P+  ++  L+ G C   + + A   Y  M ++G      T+  +
Sbjct: 352 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 411

Query: 457 LSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHL 516
           +   C+N   D AV LL EM K    PD+        G  + G+ +TA  +   +    L
Sbjct: 412 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 471

Query: 517 LPDG 519
            P+G
Sbjct: 472 SPNG 473

BLAST of HG10000082 vs. ExPASy TrEMBL
Match: A0A1S3CKV3 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502115 PE=4 SV=1)

HSP 1 Score: 966.1 bits (2496), Expect = 6.2e-278
Identity = 478/535 (89.35%), Postives = 500/535 (93.46%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAF 536
           PD+NNLYE CAGLG+CGKV+TAIMLCSELEAQ LLP+GFDKLKAF LLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

BLAST of HG10000082 vs. ExPASy TrEMBL
Match: A0A5A7UZU7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00030 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 4.0e-277
Identity = 478/536 (89.18%), Postives = 500/536 (93.28%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAFG 537
           PD+NNLYE CAGLG+ GKV+TAIMLCSELEAQ LLP+GFDKLKAF LLH+N+DAFG
Sbjct: 481 PDVNNLYELCAGLGQGGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAFG 536

BLAST of HG10000082 vs. ExPASy TrEMBL
Match: A0A0A0KFT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111910 PE=4 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.2e-276
Identity = 476/536 (88.81%), Postives = 501/536 (93.47%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS++PK D+SLGKRN + IPIPHRSIPEPRG DLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+GLTAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFC+MKDYGFLPTVESCNA+LSSLL F+R  IALAFYREMRRSRI PN YT
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA VVFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRS ME
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TL+NGFCK GKLQEASKLFGEMKGMSLSP+TVTYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVKADILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS F PCDQTFRMLLSTFCENEDYDGAVQLL+EML   KA
Sbjct: 421 YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLLHNNEDAFG 537
           PD+NNLYE CAGLG+CGKV+TA+MLCSELEAQ LLP+GFDKLKAF LL +N+DAFG
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNKDAFG 536

BLAST of HG10000082 vs. ExPASy TrEMBL
Match: A0A5D3CJ34 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001250 PE=4 SV=1)

HSP 1 Score: 953.7 bits (2464), Expect = 3.2e-274
Identity = 472/528 (89.39%), Postives = 494/528 (93.56%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRFL FRRFSTLLGSV RT AS+NPKLDV LGKRN N IPIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFRVKHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL K RKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  I L+FYREMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CA CKLGRLDKA +VFEEMGTMGFSPNV SYNTLIAGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFC  GKLQEASKLFGEMKGMSLSP+T+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSR QVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQCV K+SERAFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML  RKA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFDKLKAFDLL 529
           PD+NNLYE CAGLG+CGKV+TAIMLCSELEAQ LLP+GFDKLKAF++L
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFEIL 528

BLAST of HG10000082 vs. ExPASy TrEMBL
Match: A0A6J1CFK6 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010981 PE=3 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 1.2e-265
Identity = 455/520 (87.50%), Postives = 483/520 (92.88%), Query Frame = 0

Query: 1   MRFLLFRRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVV 60
           MRF+ FRRFSTLLGSV R SAS NPK+DV+LGK+NWNP PIPHRSIPEPRGQDLD VNVV
Sbjct: 1   MRFVPFRRFSTLLGSVPRNSASANPKMDVNLGKKNWNPTPIPHRSIPEPRGQDLDVVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDWTKLDCLSLGLTAFRVKHILLK QKDYV+SLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKIQKDYVISLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILAKYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHILAK+RKFKSAESILRS+IESCSI+FPSKLFESLLYSYR+CDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILAKHRKFKSAESILRSMIESCSIEFPSKLFESLLYSYRVCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL FNR  IALAFYREMRRSRISPN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFNRGDIALAFYREMRRSRISPNSYT 240

Query: 241 LNLVMCASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAME 300
           LNLV+CASCKLGRLDKAT VFEEM  MGFSPNV SYNTL+AGYCNKGLLSSAMKLR+AME
Sbjct: 241 LNLVICASCKLGRLDKATKVFEEMRIMGFSPNVASYNTLVAGYCNKGLLSSAMKLRTAME 300

Query: 301 KNGVPPNDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+TLINGFCK+GKLQEASKLFGEMK MSLSP+TVTYN LINGYSKVGN +
Sbjct: 301 KNGVPPDVVTFNTLINGFCKDGKLQEASKLFGEMKVMSLSPTTVTYNTLINGYSKVGNSD 360

Query: 361 MGNRLFEEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGN+LFEEM R +VK DILTYNALILGLCKEGKTKKAA+LV+ELD+ +LVPNASTFSALI
Sbjct: 361 MGNQLFEEMLRFKVKPDILTYNALILGLCKEGKTKKAAFLVRELDKMNLVPNASTFSALI 420

Query: 421 YGQCVLKKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKA 480
           YGQC  K SERAFQIYKSMIKSGF PCDQT+ MLLSTFCENEDYDGAVQLLKEMLK  KA
Sbjct: 421 YGQCARKNSERAFQIYKSMIKSGFSPCDQTYGMLLSTFCENEDYDGAVQLLKEMLKRHKA 480

Query: 481 PDLNNLYEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFD 521
           PDL+ L   C GLGRCGK+QT IMLCSELEAQHLLP+GFD
Sbjct: 481 PDLDILSVVCTGLGRCGKLQTGIMLCSELEAQHLLPEGFD 520

BLAST of HG10000082 vs. TAIR 10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 616.7 bits (1589), Expect = 1.8e-176
Identity = 309/514 (60.12%), Postives = 387/514 (75.29%), Query Frame = 0

Query: 7   RRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVVHSHLIH 66
           RR      S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI 
Sbjct: 10  RRLRYQFSSFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQ 69

Query: 67  SDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILA 126
           SDW KL+ LS  L +FRVK++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L 
Sbjct: 70  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT 129

Query: 127 KYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRY 186
           K RKFKSAESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR 
Sbjct: 130 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRN 189

Query: 187 ASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYTLNLVMC 246
           A+DTF +MKDYGFLPTVESCNA++SSLL   R  IAL FYREMRR +ISPN YTLN+VM 
Sbjct: 190 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 249

Query: 247 ASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPP 306
             C+ G+LDK   + ++M  +GF    VSYNTLIAG+C KGLLSSA+KL++ M K+G+ P
Sbjct: 250 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 309

Query: 307 NDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLF 366
           N VTF+TLI+GFC+  KLQEASK+FGEMK ++++P+TVTYN LINGYS+ G+ EM  R +
Sbjct: 310 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 369

Query: 367 EEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVL 426
           E+M    ++ DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV 
Sbjct: 370 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 429

Query: 427 KKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNL 486
           K ++R F++YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++     D   +
Sbjct: 430 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 489

Query: 487 YEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFD 521
           ++ C GL   GK Q    L  E+E +  L + F+
Sbjct: 490 HQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520

BLAST of HG10000082 vs. TAIR 10
Match: AT4G26680.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 616.7 bits (1589), Expect = 1.8e-176
Identity = 309/514 (60.12%), Postives = 387/514 (75.29%), Query Frame = 0

Query: 7   RRFSTLLGSVARTSASVNPKLDVSLGKRNWNPIPIPHRSIPEPRGQDLDFVNVVHSHLIH 66
           RR      S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI 
Sbjct: 10  RRLRYQFSSFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQ 69

Query: 67  SDWTKLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILA 126
           SDW KL+ LS  L +FRVK++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L 
Sbjct: 70  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT 129

Query: 127 KYRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRY 186
           K RKFKSAESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR 
Sbjct: 130 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRN 189

Query: 187 ASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRSHIALAFYREMRRSRISPNLYTLNLVMC 246
           A+DTF +MKDYGFLPTVESCNA++SSLL   R  IAL FYREMRR +ISPN YTLN+VM 
Sbjct: 190 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 249

Query: 247 ASCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPP 306
             C+ G+LDK   + ++M  +GF    VSYNTLIAG+C KGLLSSA+KL++ M K+G+ P
Sbjct: 250 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 309

Query: 307 NDVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLF 366
           N VTF+TLI+GFC+  KLQEASK+FGEMK ++++P+TVTYN LINGYS+ G+ EM  R +
Sbjct: 310 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 369

Query: 367 EEMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVL 426
           E+M    ++ DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV 
Sbjct: 370 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 429

Query: 427 KKSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNL 486
           K ++R F++YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++     D   +
Sbjct: 430 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 489

Query: 487 YEFCAGLGRCGKVQTAIMLCSELEAQHLLPDGFD 521
           ++ C GL   GK Q    L  E+E +  L + F+
Sbjct: 490 HQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520

BLAST of HG10000082 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 4.3e-66
Identity = 144/450 (32.00%), Postives = 239/450 (53.11%), Query Frame = 0

Query: 71  KLDCLSLGLTAFRVKHILLKTQKDYVLSLEFFNWVSTQNPSS-HTLETHCIILHILAKYR 130
           +L  LS   T     ++LLK+Q D  L L+F NW    NP    TL   CI LHIL K++
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA---NPHQFFTLRCKCITLHILTKFK 97

Query: 131 KFKSAESILRSI-IESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYAS 190
            +K+A+ +   +  ++   ++ S +F+SL  +Y LC S+  VFDL+ K+++ L     A 
Sbjct: 98  LYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 157

Query: 191 DTFCKMKDYGFLPTVESCNAFLSSLLKFNRS-HIALAFYREMRRSRISPNLYTLNLVMCA 250
                 + +GF+P V S NA L + ++  R+   A   ++EM  S++SPN++T N+++  
Sbjct: 158 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 217

Query: 251 SCKLGRLDKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPN 310
            C  G +D A  +F++M T G  PNVV+YNTLI GYC    +    KL  +M   G+ PN
Sbjct: 218 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 277

Query: 311 DVTFSTLINGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFE 370
            ++++ +ING C+ G+++E S +  EM     S   VTYN LI GY K GN      +  
Sbjct: 278 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 337

Query: 371 EMSRLQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLK 430
           EM R  +   ++TY +LI  +CK G   +A   + ++  + L PN  T++ L+ G     
Sbjct: 338 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 397

Query: 431 KSERAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLY 490
               A+++ + M  +GF P   T+  L++  C     + A+ +L++M +   +PD+ +  
Sbjct: 398 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 457

Query: 491 EFCAGLGRCGKVQTAIMLCSELEAQHLLPD 518
              +G  R   V  A+ +  E+  + + PD
Sbjct: 458 TVLSGFCRSYDVDEALRVKREMVEKGIKPD 484

BLAST of HG10000082 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 5.7e-66
Identity = 145/443 (32.73%), Postives = 236/443 (53.27%), Query Frame = 0

Query: 82  FRVKH---ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILAKYRKFKSAESIL 141
           F+  H   +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++
Sbjct: 85  FKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLI 144

Query: 142 RSIIESCSIDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMK 201
            S  E   ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM 
Sbjct: 145 SSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKML 204

Query: 202 DYGFLPTVESCNAFLSSLLK-FNRSHIALAFYREMRRSRISPNLYTLNLVMCASCKLGRL 261
           +YG + +V+SCN +L+ L K   ++  A+  +RE     +  N+ + N+V+   C+LGR+
Sbjct: 205 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 264

Query: 262 DKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPNDVTFSTL 321
            +A  +   M   G++P+V+SY+T++ GYC  G L    KL   M++ G+ PN   + ++
Sbjct: 265 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 324

Query: 322 INGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFEEMSRLQV 381
           I   C+  KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +
Sbjct: 325 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 384

Query: 382 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSERAFQ 441
             D+LTY A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+
Sbjct: 385 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 444

Query: 442 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLYEFCAGLG 501
           ++  MI++G  P   T+  L+   C+  D D A +LL EM K    P++        GL 
Sbjct: 445 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 504

Query: 502 RCGKVQTAIMLCSELEAQHLLPD 518
           + G ++ A+ L  E EA  L  D
Sbjct: 505 KSGNIEEAVKLVGEFEAAGLNAD 525

BLAST of HG10000082 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 5.7e-66
Identity = 145/443 (32.73%), Postives = 236/443 (53.27%), Query Frame = 0

Query: 82  FRVKH---ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILAKYRKFKSAESIL 141
           F+  H   +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++
Sbjct: 85  FKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLI 144

Query: 142 RSIIESCSIDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMK 201
            S  E   ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM 
Sbjct: 145 SSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKML 204

Query: 202 DYGFLPTVESCNAFLSSLLK-FNRSHIALAFYREMRRSRISPNLYTLNLVMCASCKLGRL 261
           +YG + +V+SCN +L+ L K   ++  A+  +RE     +  N+ + N+V+   C+LGR+
Sbjct: 205 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 264

Query: 262 DKATVVFEEMGTMGFSPNVVSYNTLIAGYCNKGLLSSAMKLRSAMEKNGVPPNDVTFSTL 321
            +A  +   M   G++P+V+SY+T++ GYC  G L    KL   M++ G+ PN   + ++
Sbjct: 265 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 324

Query: 322 INGFCKNGKLQEASKLFGEMKGMSLSPSTVTYNILINGYSKVGNGEMGNRLFEEMSRLQV 381
           I   C+  KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +
Sbjct: 325 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 384

Query: 382 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSERAFQ 441
             D+LTY A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+
Sbjct: 385 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 444

Query: 442 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKSRKAPDLNNLYEFCAGLG 501
           ++  MI++G  P   T+  L+   C+  D D A +LL EM K    P++        GL 
Sbjct: 445 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 504

Query: 502 RCGKVQTAIMLCSELEAQHLLPD 518
           + G ++ A+ L  E EA  L  D
Sbjct: 505 KSGNIEEAVKLVGEFEAAGLNAD 525

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900606.12.2e-28591.57pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Benincasa ... [more]
XP_008464167.11.3e-27789.35PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial ... [more]
KAA0060788.18.3e-27789.18pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004140069.12.4e-27688.81pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis sa... [more]
TYK11943.16.6e-27489.39pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9SZ102.5e-17560.12Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
Q9FIX36.1e-6532.00Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q0WVK78.0e-6532.73Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
O045041.9e-5830.89Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Q9LVQ51.8e-5630.19Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A1S3CKV36.2e-27889.35pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Cucumis ... [more]
A0A5A7UZU74.0e-27789.18Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KFT31.2e-27688.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111910 PE=4 SV=1[more]
A0A5D3CJ343.2e-27489.39Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1CFK61.2e-26587.50pentatricopeptide repeat-containing protein At4g26680, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT4G26680.11.8e-17660.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G26680.21.8e-17660.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G39710.14.3e-6632.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.15.7e-6632.73Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.25.7e-6632.73Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 217..334
e-value: 6.8E-35
score: 122.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 424..520
e-value: 5.4E-13
score: 51.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 80..215
e-value: 3.5E-10
score: 41.7
coord: 335..408
e-value: 1.5E-19
score: 72.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 271..320
e-value: 2.6E-20
score: 72.4
coord: 201..250
e-value: 3.7E-8
score: 33.4
coord: 377..424
e-value: 6.6E-11
score: 42.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 309..342
e-value: 3.6E-9
score: 34.2
coord: 450..482
e-value: 9.7E-5
score: 20.3
coord: 380..413
e-value: 3.5E-7
score: 28.0
coord: 205..237
e-value: 3.0E-4
score: 18.7
coord: 415..446
e-value: 1.5E-4
score: 19.7
coord: 239..273
e-value: 2.9E-6
score: 25.1
coord: 274..307
e-value: 3.8E-7
score: 27.9
coord: 344..377
e-value: 6.8E-7
score: 27.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 344..372
e-value: 3.0E-7
score: 30.2
coord: 450..477
e-value: 0.017
score: 15.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 447..481
score: 9.185627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 11.268274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 272..306
score: 12.780933
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 13.054966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 377..411
score: 11.41077
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..236
score: 9.229472
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 11.005202
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 10.544828
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1..533
NoneNo IPR availablePANTHERPTHR47932:SF32PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..533

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000082.1HG10000082.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding