Cucsat.G9907 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCCGGTTGGGTGTGAAGCATAGTTTTGAAGCAAACGTGGCGGTATGCGTTGAATGGACGCACTTGCTGGGGTCTCCTATATAAACCGGCCGCGGCTTTCAGAAACTTCCACATCAACGGTGAAGTTTCGTATTTCGATACTAAGGTACAATCAGTTATTCTTTTTGAAAACAAGAATATTTGTCTTCTCTTTGATTGTTTTCAAATCATTCTTCGTTATCTTCTTCTAATGTTGTAGGAGACTTTTGGGTTTTGGTTAAAATGTCGGCTGATTTCTCTACAGAGCGTGCTCTGTTCGGGGGAGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGTTTGTCTTCTTTAATTGCGATTCTGTCTCTTTCCTTTTTGTTGTATCACTTTTTGTATCTTTATTTAATTCTTTAAATTCATATATTTAATTCTTTATTGTTGTAACTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGTTGGTAGCCATTTGATTCTTCTATGAAGATAGTTAAGGTTATTTTTTAGTTAAAGCTACTGACTTTGGAAAGTTGCTAATGTTTTTTTCTTCCCCTTCTTTTTTGAATATGTTTGTGGCGGATTTATAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAAGCGTGGTAAATCTTACTTTTACTTTATGATATACATTTTCTCATCTTTGCTTACTGCCTGCTCTCTCTGCTGTCAGTTTAACATCCAAGTATTAACTAGTAAGCAACAATTTGAGATGGGTTTGCTTGTTTTGTCCATTAAGTACTTAGTTAGAGAGTGTGTGATGTTTTATGGGGGTGATCAGAGATGTTTGAAGAAGTAATTATTTATCTAGTAATATCAGTTTCACTCATCACAAAAGAACTTCCATCTTTCTTCTTTTACAAACTTTGGAAATATGAGAAACAGGACCCTGTGTGTGGATAGTGTAGTCTTCTAAGTTTAATTTCAAGAGATTGATGTCACATTTTATGCAGTCAGATGTTATGGGCTAACTCAAAGCACAGTCATGTTATGTTAGTATTTTGCCTTCTGTTCCAATTAGTTTTTATCTATAAATAAATGTTTGCTTCATTGTTTCATCTTCTTGCAATCCGCACCATCACATTGTCTTATGATATTCTGAACTTGAGCTCTTGATGTAATTTCATGGAATCATGTCGTTTGTTTTACTTATCATGCAATACTTCTTCAGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGAACTGTGTTATGGAAATATACCTTCTGTAGCTACAACTGCCGTTGGCCAGATGGTATGTGCTGCTGCTGTGTGTGCTGGTTTATCAATTACATAGCTGGTTGGATATTTTAGCTTCAAAACACATCCTTCTTTTCATTTTACTTTATTTAGTAACTTTTTTGTTTCTCGTACCATTTTTGTTTATAATACTAAGTTTACTTCCTCTAGAAAATTTGCATGCTTGCTATTGTTTAACATAGCCTTCAACTCCAACCATTAGCAATCAAATTAGAGATGTCATGTTACTTTGAATTTGTTGTAATTTTAGAAATTTGGCCTTTTTGTATGTCTTGGGTTAGCTACTTCGGATTTAGTTTGTTCTGTTTTTATATGCATTGTGTGAATCACTATATTTAGAACTGTTCAGCTGAGACGCATATCTCATGAACAAAATGAAAGACAGAAGTAGAGGCACATGCTCGATGCCTCTCTATCATAATTACAAAGTTAATAATAATAACAGTGCACTAACAAAAGGATGACATTGATTGGTACTACTACTGTTTCACTTAACTGACACAGATCTCTATAGCAAATTCTTTCTTAGTCATGCTCAAAGTGATGCCAGCATTACTAATCAATTTCGTTGTTTCTATTTTTTGTTATATCTGGCATGGTTCTTTGGTTTAAATTTGTTGGTTTGGATGCATCTGCTAAATGTACCAGGCCTGTCAAGACTTTGTTTTTAATTTATTCATGAGAATCATTGGATGTCAGTTGAACTTCGACTTTTCCATGAATTTTTATCCAGTTTTCCTGCTCAGTTGTTGGCAGTTGTTATGGTTGCTAACCGCCATGACTTTGTCACACTTTTTCTTCCCCTTTTTTAAATGGGTCTTGTTTCTGTCCGTTTAGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTAACCTCTCTTATTTTCTTTACCCTAGTGTGGTGGTTCCCAATGTCTTGTAGGATTAAAATCTGTTTATTGCTTTATGCAGGTTTATTTGGCAAATCTGCGACTTAAGGGAGTTGGTACAGATGTGCTAATCTCTGCATATGAACCCATTGTCATAAAGTGAGTAATTACTCTCAAACAAAAGGAAACAAACAATTAGTAGAATTCTAAGTGAAATAGTTAGTTAAGTCATAGTCTACTTAGATGCATGATATTACTATTGACATCACCACTCCGGCACCTACTCCCTTGACAAACTTATTTAAGGGGCTCACATTCCCCTCACTGCAAAAAATACCCTCCATGATACCACAAATTTGACCTGGTCCTCATGTTTATTCCTCCTTGTGTTTTTTCCTATCACTGCCCCTTGCCCACACTTTCACTTTGGCCAACCTCAACTGTGAAATATAAAATAGTAGTGTCAGGAACTTCCTGGTGATAGGCATCCTTACCAACTCTCTTAGATATAGGTTTTAGGACCATACTAATGTAAGATGTGTGTTTTCATTCCCCTTATTGCCACTGGCCTCTGTCTGTGAAATATGAATAAATATACAAGTTCATCGATTGTTTTACATTGCTAGCTCTCTTCATGCAGTCTACTTGAATGAGTATTTCATATTTATTCATATCACTCCAGATGTACACTCCCGTAATAGGGTCCACCGTCCTCACTACAATGATCTACCAGGCGGATAACTAATTTGAAAGCTAAATAACTAATTATTACCCTCTGTTTTCCTTCTTGTACATGAAGCATATGGAGAATCTTACTTGTTCAGTTTGTATTTTTTTGCGTGTTCTTAATTTGAAATTTAGGATTAGTTACCATCTGTCATATTGCCAATAATCATAACTCAAGCTGTTTTGCTTTACATCGTAGAATAATGCATACAACGCTTTCTTCTTTACAATGTTGATTGGTTTCCTTTACACCAGGGCTAACAGCCAGATTGAACTGTTATGGTCTAGTATAAGAAAACATGATACTGAGAAACTCAAGAACGTAGAGATGCATCCCGAAAGGATGGCACTATCTCAATCATTTTGTAGGGTGATAAGGGCCCAAACAGAACCATCTATTTTAATTGGCCAACTTGGCTAAGTTACATTTTTATATCTGGCCCAGTCTGAAGCAAAGCCCATTTTCTTACGTCTTCATAAATTACAACCCAAATAGGATTCAAACGTGCAACTAGCATAGCATATCTTTCTTCTTGTACCTGTCACTTGCAACGCAACACTATTGCTTATAATTGTGCTACATTGCTGTGGTTGCAGTCCTTTGAGCGAAAGTGCTAGCTCTGTCGGCTCTGGTTTGGCCACTCCTGCCTCACACTCAGGTTACATGCCAATGCCTGAGGTATTCAAGCTTGCAGTCTCTAGCTTTAAAGTCTGTGACTGGAGCCTTTTTGGTGCGCCTGCCTAATCTAGGAGATAGGATCAGCGTTTGTTCATTATTATTTCATTAGTATGTTATGTTACATTGGGAATGTTCCCTGCTGCTCTCTTGAGTTAGAAATCGTTTGTAGAGGTTTTAGAGCTGTTCGTTGTTGTTGGGTGTTGATTTTTAATCAACGGAAAAGTTGAAAATATGAAGTAATGGCATATGTAAATGGTAGAAGTGCCCTTTAAGGTGGACAAAGTAGAACAAGTATTAGCTGTTTGTAGTAGGACCCCATATTTTTGCATCAGTCAATCACGTGGCAAACAAAAGGTTTGAATATTAAACCGTGACTGACTGGCCATATTATGTAGTCTAGTTTGTGTTTTCACACATGCAATGGTGACCTTTTCTTGGGGGGAAAAAAAGAAAGAAAGAAATTATTGGTGGGCGTTTTACATCAAATTACATCAAATTATTGTCTAATCTTCTAATAATTGCGGAAGGCACAACTACTACCCTCTTTGAAA ATGTCGGCTGATTTCTCTACAGAGCGTGCTCTGTTCGGGGGAGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAAGCGTGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGAACTGTGTTATGGAAATATACCTTCTGTAGCTACAACTGCCGTTGGCCAGATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTATTTGGCAAATCTGCGACTTAAGGGAGTTGGTACAGATGTGCTAATCTCTGCATATGAACCCATTGTCATAAATCCTTTGAGCGAAAGTGCTAGCTCTGTCGGCTCTGGTTTGGCCACTCCTGCCTCACACTCAGGTTACATGCCAATGCCTGAGGTATTCAAGCTTGCAGTCTCTAGCTTTAAAGTCTGTGACTGGAGCCTTTTTGGTGCGCCTGCCTAA MSADFSTERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQGREAQNIVRVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLATPASHSGYMPMPEVFKLAVSSFKVCDWSLFGAPA Homology
BLAST of Cucsat.G9907 vs. ExPASy Swiss-Prot
Match: Q54ML6 (Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44689 GN=mog1 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.1e-17 Identity = 64/203 (31.53%), Postives = 109/203 (53.69%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy Swiss-Prot
Match: A3KPP3 (Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.9e-17 Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy Swiss-Prot
Match: Q32PE2 (Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.3e-11 Identity = 60/193 (31.09%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy Swiss-Prot
Match: Q9HD47 (Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10 Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy Swiss-Prot
Match: O75002 (Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mog1 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 53/192 (27.60%), Postives = 90/192 (46.88%), Query Frame = 0
BLAST of Cucsat.G9907 vs. NCBI nr
Match: XP_004135179.1 (ran guanine nucleotide release factor [Cucumis sativus] >KGN51907.1 hypothetical protein Csa_008794 [Cucumis sativus]) HSP 1 Score: 397 bits (1021), Expect = 1.76e-139 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Cucsat.G9907 vs. NCBI nr
Match: XP_008446339.1 (PREDICTED: probable ran guanine nucleotide release factor [Cucumis melo]) HSP 1 Score: 387 bits (995), Expect = 1.62e-135 Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Cucsat.G9907 vs. NCBI nr
Match: KAA0034408.1 (putative ran guanine nucleotide release factor [Cucumis melo var. makuwa] >TYK17724.1 putative ran guanine nucleotide release factor [Cucumis melo var. makuwa]) HSP 1 Score: 369 bits (948), Expect = 6.87e-128 Identity = 192/212 (90.57%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of Cucsat.G9907 vs. NCBI nr
Match: XP_023552843.1 (probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo]) HSP 1 Score: 363 bits (933), Expect = 4.59e-126 Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of Cucsat.G9907 vs. NCBI nr
Match: XP_038892350.1 (ran guanine nucleotide release factor [Benincasa hispida]) HSP 1 Score: 363 bits (931), Expect = 9.26e-126 Identity = 187/202 (92.57%), Postives = 190/202 (94.06%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy TrEMBL
Match: A0A0A0KU01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1) HSP 1 Score: 397 bits (1021), Expect = 8.52e-140 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy TrEMBL
Match: A0A1S3BEU3 (probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103489108 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 7.85e-136 Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy TrEMBL
Match: A0A5A7SUT7 (Putative ran guanine nucleotide release factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00530 PE=3 SV=1) HSP 1 Score: 369 bits (948), Expect = 3.33e-128 Identity = 192/212 (90.57%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy TrEMBL
Match: A0A6J1JJW2 (probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LOC111485103 PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 6.37e-126 Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of Cucsat.G9907 vs. ExPASy TrEMBL
Match: A0A6J1GZ86 (probable ran guanine nucleotide release factor OS=Cucurbita moschata OX=3662 GN=LOC111458863 PE=3 SV=1) HSP 1 Score: 360 bits (924), Expect = 5.23e-125 Identity = 182/200 (91.00%), Postives = 189/200 (94.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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