Cucsat.G9901 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9901
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontranscription termination factor MTEF1, chloroplastic
Locationctg1673: 1420226 .. 1423800 (+)
RNA-Seq ExpressionCucsat.G9901
SyntenyCucsat.G9901
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTCTCTGTCTTATAGGACAGACAAGTTACTAAACATGTTGAATTAGTATCAGCCAACTGAAGAAGACGTTTAACTATAACTTGTGTGCTATGTTGCTACTTTTATTTACAGCTCCATATCAGCGGGAGCAAATCAAAGACAGTGCCTTAGCTGCCAAACAAGACAGTCAGGGATCAAGAAAAAGAAAACAACTCCCTGAAACCTCATTTCATGGAGAGTAAGCGCCGAGTCTCCTTTGCTCGGTGACAGCCACCTCGAGAGGGTGCTTCTGAAATAGTGTTTCTATTAGGCTATCGGCTTCTTGCTGTAAGCTATAGTTGCGTGGTATCGATGAACTTGAACAAGACGAGTTGAACATAGTTCAAAATCATCCTCAAACTGTCAGGTACGCGATCAACTTTTCCCAGAATTACTGTACTGTAGTATGTAAAACATAGGTGCAGTTAGTTGCTGCTAGATATGAACTGCTAGCTTTGACAAAGTTGAAATCTATCAGTCGTTCAGTATTGTATTGGTGTAGAGGAAACATATGAATCAATAGCGAACATAGGGAATGTAAAGATCTGATGTACCGATTTCTGTCATACTCATACATAAGACCAAGTTTGCTAGGACTCCGTAACGGTACACGAAACCTTGAGATAGAACTCAAATGCATTGAAATATAAAAGTAACGGAATTACAATATCATCCTTCTAGGTAGTAATTATTCGAGTTACTCCACTACTTAAGATTAAGCCACTAACCAATTGTCTATCTTCCTCGTTTCCAGTCGCTCTATTTATTATCAAAAAGACAAGAAACTTCCTGACTAATTACTATTGTATCCTCAATACTTCCATAACATCCTTAACAGTATTACTACCACATCGATTTTCCAAAAATATGTGCAAACTTTTATGCACAAGGAGTTTGAATAAAACCATCAAAACATTGCGATGGTCTGACGACAAGAGCAGTTTTCAAAGGCAAACTTACTCAAGGAAACAAGCGATCATCTAACAATGAAACAGCACAAGGGCCAGAAGAAGAAGCCCAATTGTGTTGAGTGGTGTCCAAGTTCCCATTAACATGATAATCTACAGGATTTATTGGCAGGTTCATCTCTGCTGCAGGTTGAAATGTTGGGTCATTAAAAAAATTAACATTATACGACATGTAGGAATTTTGCCCTCCTAGCTGGGGCCTTAGAGCTTCTGTTCTGCTTAGTTCCGGGAGGACACCATTTTCTTGTCCAGAATTTGAAATCTCCGGACTCCGTCCTGTGCCGAAATAACCAGGATAACTAGTAAAGGAGGAACTTGCAGAGCACTCCGCATCCCTAAGCAAGAGAAGTAATTAACACATGAAAATTAGTTTTCTGTAAAATTATCACTTTCCAAGCTCATTTATACAATAATATCAACAACTGTCCAAAACTTTTACATAAGGTCCTGTTAGGAAGTCTATAGTTGTTCATAGTTGATTTCAATCTTACCGATGGAGAACGAAGTTTGGATCATCATGTAAAACTATATTTTGGCTATCATTGGGAATCCAAGAGAAGTGTTGGAGTTGTTGAATTTGTTGCTCAACACTCATATCAAAAGTTAAATGCATTCCATCCTGCATTTGGAATCAAAGAAACTTGACATCTTTGAAGTAATGAAAATATTTGTTAAATTCTCTCCAATCTCAATAGTGTAACTTCTTAGGCCGCAGGGCTTTTATTATATTCTTAATGCTTTTCCCGCTTTAATTGTCAGTGTGGAGATTAAAATGAAATGCCACAAGAGATTATAGTATTCACGGGAGAGATGTAAGTTTAAACCAATATATTAGGACTTCTTTACCTGATTAGTGAACTCTAATGGTACTGGAGGATGCTTCTGCAGATTGTCCTGCCAAAATTAAGAAAATGTTAGTACAATATAAAGCCCAAATCTTTGTCTTATCTCCTAGAAGATTCAAACATACAGAACCCTCAGAAAAGAGGAACTAAATAAAATTCCCAAGACTGTAATCGCTATGTAATGGAACTTTCGCCGGAGCTGCCTTGACAAGAAACTACTTATTTCGATTGGTGAACTGGGAATGCCTGACAATTCAAATTTTATGGTAAACAACAAGGGGCTCGCTCATGTATCCCATGCCAAATTAATGTATTCTGGGCCGCAACAAGGGGTTCATATGAGAGAAGTCCATGTATGGACAATACTGGTGAAAATTCTTAACATTACCACAATCCACTTGGCTGTTTTGCTCATTAAATGTGAAGCAGCATACCAAAAACGAGAAGAAGAAAAAACCCGTTTTGAAACCTTTGTTTTCCAACATTTCAACCACAACAGAAAGGAATAGATTGATACCTTATGCAATCGAACTTGATTAAGTGTTTCTCTCATCGAATCCTCCATTTGGGACAAATGATCCACATTGTTTATCTTGTCAGGGTTTCTCCAACAGCTGCAAAGAAGAAACAAGAAGATACAAAATTTGGGAACAGCAAAAGGACTGCTTAACAAACAAGAATGATCAAAAGATGTGCAGCCATTGACCTTAGTCTCTGATGTACTTCAGAAAGTTGGGTCCTCAATAACTTTGCTTGGCCGGTCAAATCCTGCCATTATGGATTGTCAACGACTAATACAAAGAAACGAAACATACCAAAAAGCTAGTCCCAAGGTGTACCTCAATCGTTTGGCTACTGAAACAAAATGAAAAACGAACAAAAACCGTCAAAAGAGTTGTCTTGCAAATATAAACTTCATGGGGGAGAAACAGTGTAGAGTCTACCTTGTTCCTAGCAAATCGTCTATGTTGACATCGTGGTCTAATTTCTTGAAAGTTTTCCGCAGTGACTAGAAGATTAAAGGATGATTAAGTATGTTAATGAATATGTAAAAGAGAGGAAAGAATGAAGTGAAAATGGAGTGTGAAACTAATTACTTACATCAATGCTTTCCATTTTCCTGCTCCAATCAGTGAGAGCACACGTATCAGTTGCCAATTATTAATCTATTAGTTAAGTTGAAGTTAAACAACCTATTTTCCTCACCACTATCATAAACCATTTATTCATGATCAAACTTCAAACCTTGAGATAGGTATAGATAGTACAAGATTATGGCATTTGAGCTTTGCTCAAGCTAAGTTTGCTAATAGCTTTAGTTTATAGAATGCAAACATTTGATACGTAGAATATGTATCAGATTGATTTGTTCATCATACGTCTTTTATATTATTCATGTTAGTGATATTTTTGTTATAAGTTGTCAATTAGTTTTAGGAATACAATTTAAATTTAAATGCAGAAGGGTTTTGATGATACCTTTTCGTTCTTTCCTGAGGGGTTTGTTGAGCAAATCTAGCGATTACCTCCTCAAAGCTACCAATAAATAAGGAAAAGAAAAAGGATTAACGTTATAATTATTTTATCACTTCATCAACTCATCAAAGTATTAACATTATAATTATTTTATCACTTCATCAAATATACACATCCACCAACCACAATTACTAAACCTTGGCTTTGATCAACCCTAAATACACATACACTAACCACCTTGGTTCTACACCAACACTGCTTAATTACAAAACACAAAATCCAGCCTTTTTATCTCAATTTCTTAAAAGTTTGGCTTTTGATTTTGAAAACAATCATGAACAACAAAACTTAAAAAGCAACAAATGATTATCAAACAAAGAAAGCTTTACATACACAAGTAATGTACTCGGAGTAAAAGCCAAAATTCAAAAATTCAAAAACTAAAAACAAAACGAACATCCAAAACAATGTGTTGTTGCATCGAATATAAATAAGAAAATAGTAAGAAAAAAACCTGCGTTTTTCACAAGAAAGATTGGGCTTTCCAGTAGGTGAAAACATGAGAAGAATGATATCAACATCACATAAAATAGATAATTCCTTAGCCTTCTTCATAATCCCATTCTTTCGTTTAGAATAAGTCGATTGTCTTCCGTTTGTATTCTCTAATCTCTTTATCTTCAATTTTACTCTTCCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCATATCTTCTTTTTTTCTCAGTTATTATTATTGTTATTCTCTCTAACCATCCCCTTTTTTTCTGTTTTTCACCCTTTTTTTTCAATTGCATTATACCAAAGTTTCTCTTTTTTTTTTTTTTTTCTTGATGAATTTCGTTTGTGAAAATGCTACGGGCAACTATTAACCATGCGTTAGTAATTTTGCGGTGGAAAATCAAAAGTTATTATCAACCACTAATTATCTACGGTGATGAATTAATTGTTTTTAACAAACTTAACTTAATTTACCGAAAAGTTTGTTCTTTTATGTTTGACCTTTAATTCCTTTACTCACAAAATAATTATAATCTTAAATCCTTTTTATTATCGTTGGATATACCAAAATTTAGATTCTATTAAGATTCTATCGATAATGCCACTAATTTTATTGGAATTATAATTTCATTATATTTTTTGTAAACAATAAGTTTAGTTTAGTCATCTCAAGATTTCTATTCGAGTTTAATAAACATGAAATTGTTATTCACTATTTTTTTTTTTTTTTTGTTAATCTTGTTATATATTTAAAATATATTTAATGTGAGGATTGTAAGATAAAAGAATTTATGCAAAATTTATTGTAAAATATTATTAATTAAAAGAGATATTTTGGTCCAATTTGTTCATCTTCTTCATTGAGCAGCAAAAAGCTTGGGTCTTTGAGGATGATAAGCAGACTCCCACTTCCTCCCTCAAGCTTCTTCTTCTTCTTCTTTCCTCCCTCATTGGCCGGGTCTCTTAAACCTTTGACAAACCCTAGTTTCAGAAAACCTCGTTTCACCCTTTCTCTCGATACCCAATTTTCTGACCGCTTCGACTCCGGCCTACTTTTCCGTGAGAAAATACTCTACCTTGAGAACCACCTCAATGTCGATTCCCGCAAAGCCTTCCGGGAGAATCCCCATTGTCGCTCTGCTACTCTCTCCACTCTCAAATCCGTCGAGGTCTGTCTCTCTTCCATGGGACTTGACCGATCTGCAGTCAGCCGCGTTCTCGATATGCACCCCAAACTCCTGACCTCGAATCCGGACTATGATATTTACCCCATCTTTGATTTTCTTCTTAATGAAGTTGAAATTCCATTTCCCGACATTCGTAAATCTATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCATCAATTGCGACCTGCTTTGAAGTTCTTGCGTGACCTGGGTTTTGTTGGGTTGAAAGCCATCACGTGCCAGACGACATTGCTACTGGTTTCGAGTGTTGAACATACCCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCATGAGGATGTGGTTAATATGGTGTTAAGGTCTCCGGGTTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGTGATTTGTTGGAATTGAAACGGTTTCCGCAATATTTTTCGTTTAACTTGGAGAGGAAGATTAAGCTGCGTCATCGTTCACTGGTTGAACATGGTTTGTCACTTCCTTTGTCGAAAATGCTGAAGGCTAGTGACGGGGAGTTCAATGCATGGTTGATAGAAATGCGGTGCAGTTCGTTGATGGCTGATCGTTGAAGTGAGTTGCTTTGCTTCCTGTAGTTTTGTAGTTTCTTTGGATGAGATTATTTAGGATGCTGCTTTTCTCTGTACAGTTCGGCAAATCATTCCCTGTTTTTCCCTCCCTGGTGAGATAAAAAAAAGTATTTCGCTTAATTACATTGTTCATATGATAATTGTGAGAAACAAGAAGTGAGTTTGGCAGGTCTTGTAAAATATGCTAATTGTGGAAGACTACAACTTTGAATCAATGCATTGTTACTTCCTGTCAAAAAGTATGGAAAATTATCGATAATAGCAAGTTCAACAACTGATTCGTGGTGTAGTTATTGAGTGAACTTTCATGTGATATTAGTAAGCTATGCTCATTTACTTCAGCCAGATTATACTCGCAGTTCGTTTCTATGTGGATCCTAGGAGGTGAACATGTGGTTGATTTCTATTTTGATTTTGGACTAAGGGATATCTATCTGAAATCTACTCGTGTTGCACTTTATGATGCAAGATTTTGATTGATGCTACAGCATCTTTATAATTTGTTCACTGTCTAGCTTCCAAGGGATTGAATTCAATCGTTTTATGTTTAGTTTCAATAACTCCAACAAATTTTGTTTTTACCAACAGTTTTGAACATTTTTTAATCGTGGGATTGACTTCGTCTGCTGTACTTAAACTAAAGATAACAGATGCTGCATAGCTCCAAACACACGTGGTTCTTAATATTGTGCTAAAAATTGAAATTCACATCTTGCTATTGAGATAAAAATGGTATTTTTTAGACAAATTACACAATGCTTCACTTGCACTAACGAAAATACATGGATCATTGTATTAGGGGTTATATTATGTTTCTGAGTTATTCTTCACTCAGTGGAGTTCAACATGTTTTGAATGAAAATTCGATGGTTGTGGTCAAGAAGATATGATGGAGAAATTTTTTTCTGTTTTATTTTACATACACCCTGGAACTGGAATCCCCAGCTGTCCCATACACACGTGCTGCTATGTGGAAATCCTGTAGAAACATGGCTGATGTTCGTTTATGTGAACTTTTTCCTTCAATTGTGCAGGAACTGTGGTGGAAATGATTCTACAGCTCGATCGACAAGACCAGGCATTCTACCATATTCATCTTTTAATGCTGACCTTGACTATCTAAATTGGTTGGGCTGGAGGGATTCACACGATTGTTCCCATCTTGAGTGAGATCATCAGTCAGAATGTTTGCTATTTAAACAGAGAATACGTAGAAGACAGAGACTCAACGCTTCCACAATTACCATTTGTTGATGCAATGCCGGCCCTGACTACTGTAATTTGTTGAGAACTTTGGAGACTTGCAAGTTTGGCCCCCATCCCAAATGACTGCATCACATCTGGAAGATTGCTGTCTAAGTAGAAAATATCGTGAAAACTATGCGATTCCCCTTGAACCCCTACCATCAATTGAATTTAATTTCCTATGAGAGGCATTGTAAGAACACTCAACCTGTATATTCTAAATCTTTGACCATTGTTTGAAATTCATCAGAAAGAACATGTGGTTGGGTTTGCAAAAGGCTCAAACTTCAAGGAAGAAGAAAGGGAAAGATAGGGTGAAGTGAACCCCCAAAAGGCCCAAATCATATGATAACTTAAGGCAATGTACACCTCCATTCTGGGGGCTATAAATGCAGTCTACTGAAATCATCAGTAGGACTTGAATTATATTTTTCTGGTGGAAGAAAAGTTAGTGGTGTTGAAAATGAAACTAGATTTTGTCCCACCAAAGTTAGAAACAATGAGAGATTGATTTCATAATGCATGATGATTCATTTTCTTGTTGAAACATGAGCCGAAGGACACGGTTTCTTGCTGCAGAAATGCATCACTGTTCAGTAGTCCAGATTCCAGGGGTACGTTGTCCATTACATTACATGACAAGTTTTGAAGGGTACAGTATGTATGAAAGGCCTTGGGGTCATCTCTGTTTCTCGGGACAACAAATGCAAATGCAAATGCAAAATTTGGGGTCAGCATTCGTCACCTCTGGACCCCTTTACCTTCCTACAATCAATTTGCTCAGACACAGAAAAACAAGAGAGAAGGCATCTGTCCCATTCTTTAATCATTCACCCTCGAAGGATGGGATGAGTTTTTGATTTGAAATTCATGGTCTTCATTTAATTCTGTCTCTCTCTGCTCTACTCTACTCTTAAACAGTATTCTATTTATATTATGGTTGGTTGCTTCTAAGACAGATCTGTCTCACAGGAGAATGAATGTTCTACGTAAGTCAAGTTGGTTTCAACTTTCAATACTTGGATTAATTTTGGTTTATACATTAGATGTTAAGATAGAAATGGTTTTTGATTTGTTGGCATGAGATATTATTGTAAATGCTTATCTCGGATGGAAGAGTAGGCCAAAGAGAATTCATAGACAGTGAAATTATCTGTTATGAGACAGCAATTTCAGAATCCACATGTT

Coding sequence (CDS)

ATGATAAGCAGACTCCCACTTCCTCCCTCAAGCTTCTTCTTCTTCTTCTTTCCTCCCTCATTGGCCGGGTCTCTTAAACCTTTGACAAACCCTAGTTTCAGAAAACCTCGTTTCACCCTTTCTCTCGATACCCAATTTTCTGACCGCTTCGACTCCGGCCTACTTTTCCGTGAGAAAATACTCTACCTTGAGAACCACCTCAATGTCGATTCCCGCAAAGCCTTCCGGGAGAATCCCCATTGTCGCTCTGCTACTCTCTCCACTCTCAAATCCGTCGAGGTCTGTCTCTCTTCCATGGGACTTGACCGATCTGCAGTCAGCCGCGTTCTCGATATGCACCCCAAACTCCTGACCTCGAATCCGGACTATGATATTTACCCCATCTTTGATTTTCTTCTTAATGAAGTTGAAATTCCATTTCCCGACATTCGTAAATCTATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCATCAATTGCGACCTGCTTTGAAGTTCTTGCGTGACCTGGGTTTTGTTGGGTTGAAAGCCATCACGTGCCAGACGACATTGCTACTGGTTTCGAGTGTTGAACATACCCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCATGAGGATGTGGTTAATATGGTGTTAAGGTCTCCGGGTTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGTGATTTGTTGGAATTGAAACGGTTTCCGCAATATTTTTCGTTTAACTTGGAGAGGAAGATTAAGCTGCGTCATCGTTCACTGGTTGAACATGGTTTGTCACTTCCTTTGTCGAAAATGCTGAAGGCTAGTGACGGGGAGTTCAATGCATGGTTGATAGAAATGCGGTGCAGTTCGTTGATGGCTGATCGTTGA

Protein sequence

MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMRCSSLMADR
Homology
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BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 308.5 bits (789), Expect = 8.3e-83
Identity = 157/254 (61.81%), Postives = 198/254 (77.95%), Query Frame = 0 

Query: 51  DSGLLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVL 110
           D+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ SVE  LSS GL R AV R+L
Sbjct: 28  DTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRIL 87

Query: 111 DMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLR 170
           DM P LLTS+P+ +I P+  FL NE+ I   DI KSI RCPR+L+S +D+QLRPAL FL+
Sbjct: 88  DMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLK 147

Query: 171 DLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQ 230
            LGFVG   IT + T+LLVS+VE TL+PKI+YL E LG + E+V  MV+RSP LLTYS+ 
Sbjct: 148 TLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 207

Query: 231 NNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASD 290
           NNLVPKV +F+ +M+GD+ ELKRFPQYFSF+LERKIK RHR L EHG+ +PLS+MLK SD
Sbjct: 208 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSD 267

Query: 291 GEFNAWLIEMRCSS 304
           G+FN WL+E+R  S
Sbjct: 268 GQFNHWLLELRLRS 280

[Close]
BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 56/209 (26.79%), Postives = 109/209 (52.15%), Query Frame = 0 

Query: 70  DSRKAFRENPHCRSATL-STLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPI 129
           D ++     P     T+ + LK+    L  +G+  S + +++   P L + + +  + P 
Sbjct: 235 DIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPT 294

Query: 130 FDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFL-RDLGFV--GLKAITCQTT 189
             +L+ EV I   D+ K +   P+ILV  LD        FL ++LG     +  +  +  
Sbjct: 295 IRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHP 354

Query: 190 LLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKG 249
            LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  
Sbjct: 355 QLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNN 414

Query: 250 DLLELKRFPQYFSFNLERKIKLRHRSLVE 275
           ++  L ++P Y S +L+++I+ RHR LVE
Sbjct: 415 EVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]
BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 58/213 (27.23%), Postives = 109/213 (51.17%), Query Frame = 0 

Query: 81  CRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPF 140
           C  +    LK     L ++G+D++  ++++   P +LT +    +    +F L++  +  
Sbjct: 260 CGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEF-LSQTGLTE 319

Query: 141 PDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGF-VGLKAITCQTTLLLVSSVEHTLLPK 200
             I + + RCP I+   ++ +LRP +++ R L   V +    C  T  L  S+E  L P 
Sbjct: 320 EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGL--SIESNLKPV 379

Query: 201 IQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSF 260
            ++    G   +++  M+ R   L T+S++ N++PK  YF   M     EL +FPQ+F +
Sbjct: 380 TEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGY 439

Query: 261 NLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
           +L+ +IK R+  +   G+ L L+++L  S  EF
Sbjct: 440 SLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]
BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15
Identity = 62/197 (31.47%), Postives = 100/197 (50.76%), Query Frame = 0 

Query: 99  MGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDL 158
           +G+ +  + R+L + P L   + +  I P   F L E+ IP   I   +++ P +L + L
Sbjct: 398 LGIPKEGMKRILVVKPILYCIDLEKTIAPKVRF-LQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 159 DHQLRPALKFLRDLGFVGLK---AITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVN 218
             ++RP + FL     V  K    +      LL  S+   L P ++Y  SLG+    +  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 219 MVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEH 278
           M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS++LER+I  RH  +VE+
Sbjct: 518 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 577

Query: 279 GLSLPLSKMLKASDGEF 293
            ++  L  ML  +D EF
Sbjct: 578 RVNFKLRYMLACTDEEF 592

[Close]
BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 60/218 (27.52%), Postives = 100/218 (45.87%), Query Frame = 0 

Query: 89  LKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYP----IFDFLLNEVEIPFPDIR 148
           +K +   L  +G+ R A +R+++  P +L    D  + P    + DF + E  +P     
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLP----- 346

Query: 149 KSIIRCPRILVSDLDHQLRPALKFL--------RDLGFVGLKAITCQTTLLLVSSVEHTL 208
             I + P I+  DL  +L    K L         DLG +       +     VS  E  +
Sbjct: 347 SIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSL------IERMPQFVSLSESPM 406

Query: 209 LPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVS--YFLGDMKGDLLELKRFP 268
           L  I +L   G S +    MV+  P +L  ++    + K+S  YF  +MK  L +L  FP
Sbjct: 407 LKHIDFLTKCGFSIDQTREMVIGCPQVLALNLG---IMKLSFEYFQKEMKRPLQDLVDFP 466

Query: 269 QYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
            +F++ LE  +K RH+ +++ G+   L+ ML  SD +F
Sbjct: 467 AFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKF 490

[Close]
BLAST of Cucsat.G9901 vs. NCBI nr
Match: XP_004135172.1 (transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KAE8648749.1 hypothetical protein Csa_007991 [Cucumis sativus])

HSP 1 Score: 608 bits (1567), Expect = 3.60e-219
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI
Sbjct: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL
Sbjct: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR
Sbjct: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300

Query: 301 CSSLMADR 308
           CSSLMADR
Sbjct: 301 CSSLMADR 308

[Close]
BLAST of Cucsat.G9901 vs. NCBI nr
Match: XP_008446371.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0034429.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK17705.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 565 bits (1455), Expect = 4.25e-202
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 308
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]
BLAST of Cucsat.G9901 vs. NCBI nr
Match: XP_038892906.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_038892907.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida])

HSP 1 Score: 494 bits (1273), Expect = 2.03e-174
Identity = 260/308 (84.42%), Postives = 274/308 (88.96%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISR  LPP  F F   P S   +LKPL NP+FRKPRF LSL+TQFSD  D+GLLFREKI
Sbjct: 1   MISRFQLPPPCFLF---PRSSFQALKPLRNPNFRKPRFALSLNTQFSDHSDAGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVD RKAFRENP  RSATLST+KSVEVCLSSMGL+ SAV RVLDM+PKLLT+N
Sbjct: 61  LYLENHLNVDFRKAFRENPDSRSATLSTVKSVEVCLSSMGLELSAVGRVLDMYPKLLTAN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYD+YPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTT+LLVSSVE TLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV KV+YFL
Sbjct: 181 TCQTTMLLVSSVERTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVRKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
            DMKGDLLELK FPQYFSF+LERKIK RHRSLV+HGLSLPLSKMLK SDGEF A LIEMR
Sbjct: 241 EDMKGDLLELKIFPQYFSFSLERKIKPRHRSLVQHGLSLPLSKMLKVSDGEFTARLIEMR 300

Query: 301 CSSLMADR 308
             SL ADR
Sbjct: 301 LQSLTADR 305

[Close]
BLAST of Cucsat.G9901 vs. NCBI nr
Match: XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 475 bits (1223), Expect = 8.96e-167
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0 

Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           M+SR+  LPP + F F  P S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MMSRVQNLPPWNLFLF--PRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHLNVD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 307
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]
BLAST of Cucsat.G9901 vs. NCBI nr
Match: KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474 bits (1221), Expect = 1.81e-166
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0 

Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           MISR+  LPP + F F  P S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MISRVQNLPPWNLFLF--PRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHL+VD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 307
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match: A0A0A0KW02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605740 PE=3 SV=1)

HSP 1 Score: 608 bits (1567), Expect = 5.52e-219
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI
Sbjct: 32  MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 91

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN
Sbjct: 92  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 151

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 152 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 211

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL
Sbjct: 212 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 271

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR
Sbjct: 272 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 331

Query: 301 CSSLMADR 308
           CSSLMADR
Sbjct: 332 CSSLMADR 339

[Close]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match: A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)

HSP 1 Score: 565 bits (1455), Expect = 2.06e-202
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 308
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match: A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)

HSP 1 Score: 565 bits (1455), Expect = 2.06e-202
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0 

Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 308
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match: A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 4.34e-167
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0 

Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           M+SR+  LPP + F F  P S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MMSRVQNLPPWNLFLF--PRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHLNVD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 307
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match: A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 1.18e-164
Identity = 246/308 (79.87%), Postives = 270/308 (87.66%), Query Frame = 0 

Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           MISR+  LPP + F F  P S   SL P+ NP+FRKPRFT+SL++QFSD  D+GL FR+K
Sbjct: 1   MISRVQNLPPCNRFLF--PRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHL+VD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 307
           R  S  AD
Sbjct: 301 RLQSSTAD 306

The following BLAST results are available for this feature:
BLAST of Cucsat.G9901 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84X538.3e-8361.81Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
Q9FM803.0e-1626.79Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
F4JVI31.5e-1527.23Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL32.6e-1531.47Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9ZT961.5e-1027.52Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Cucsat.G9901 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135172.13.60e-219100.00transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KAE8648... [more]
XP_008446371.14.25e-20293.18PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ... [more]
XP_038892906.12.03e-17484.42transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_03... [more]
XP_022945324.18.96e-16780.84transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0... [more]
KAG7013135.11.81e-16680.84Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su... [more]
BLAST of Cucsat.G9901 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW025.52e-219100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605740 PE=3 SV=1[more]
A0A5D3D1U52.06e-20293.18Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BFK92.06e-20293.18transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... [more]
A0A6J1G0M24.34e-16780.84transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3... [more]
A0A6J1HTW21.18e-16479.87transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 72..102
e-value: 2500.0
score: 0.8
coord: 144..175
e-value: 2.9E-4
score: 30.2
coord: 214..246
e-value: 0.038
score: 23.1
coord: 107..139
e-value: 15.0
score: 14.5
coord: 247..278
e-value: 0.008
score: 25.4
coord: 178..209
e-value: 0.35
score: 19.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 70..292
e-value: 2.2E-31
score: 108.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 37..304
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 67..302
e-value: 1.3E-44
score: 154.3
NoneNo IPR availablePANTHERPTHR13068:SF36TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTICcoord: 37..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9901.T4Cucsat.G9901.T4mRNA
Cucsat.G9901.T2Cucsat.G9901.T2mRNA
Cucsat.G9901.T3Cucsat.G9901.T3mRNA
Cucsat.G9901.T5Cucsat.G9901.T5mRNA
Cucsat.G9901.T1Cucsat.G9901.T1mRNA
Cucsat.G9901.T6Cucsat.G9901.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding