Cucsat.G9887 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9887
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionEukaryotic translation initiation factor 5A
Locationctg1673: 1279161 .. 1281702 (+)
RNA-Seq ExpressionCucsat.G9887
SyntenyCucsat.G9887
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCATTCATTCTTCTGATTGTTATTCCGTTAAAGTGGTATTTCTGTTTATCAAATAATGGTAAAACATTATTATAATATTATTGAAATAAAAAAATGAGATATTTGCCAAATCAACCTGGACCGTTCTCTATAATCGTACGGTCAGTATATTGCAGCAGAACATTTTGTTTATTCAAGATTTTCTTTCTTGAAACCCTAGGATCTCACCTCCCTTTTTGTTACCTTTGTTCTTCTTTTTCTCGTATATATAAATTCGCTTCTTTTCTCCGACCCTCCATCGCACGTCTTCTACTTTTCAGTCAGCACCATCTCTTTGAATTTTTTTTCCAACAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAGCCATCCGCAAAAATGGATACATTGTCATCAAGGGCAGACCTTGCAAGGTTCTAATTGTTTTCATTCTGATTTCCCAATTCTCACTCATCTGTTTGCCCATTTATTCGCATGAGTTTTGTTTAGCTTGATAGTACGACTACTCTGTTCCAATTTTTCTTTTTTTTTTTCAAGGGCTTTCCTTTTTACCGGATATTGTTCTCTGGTTTGTCTTAATTGTGTTTCTAGGACGGACTTTTTCCACTGTTCTGCCTTTTATTTATGTTTGTCATCTGATTTTACCTCTAGATGTATAATTGAGTTTTCTTGATTAAGTTTCATTCTTGAAATTGAATTGATGTACAATCTAGTAAGCTGTCGTGGAAGTAATGAGTTGATTGAAGCTGAGTCATATTTCAGTCTGTTGCTTTCTAGGGTTTTAAGCTTTGGTGGTTTCAGCATAATTTTATTTACTTTATATATGCTTTCTCAATTAACGATCTTGACCTAAGGCTTATGCATTACCGTTTGTAACTTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCATCTTCACACAATTGTGATGTATAAATTATTTTCTCCCCCTTCGATTTCACAATTTTCTTACCAAGTTGTAGTTTTTGTTTTTTTTTTTTTTTGTGATTTCTGATTCTTGCCTCCATGAAACACAGGTTCCTCATGTCAGTCGTACTGACTACCAGCTCATTGATATCTCCGAGGATGGATTTGTATGATCAAATTTCATTTGCTTACTTATTATATTAGTCCCCCATGGGTGTTCATGAATAGCACTGTGGCTAACCTCAATTTCAATTAAAACTTATCAGATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACCGATGATGGTCTGCTGACCCAGGTAACTTTTTCTTATTGGCTGTTGATGTTAATATTTCTCTGTGCTGTTGTGTTCTATTTGCCTTGAAAATGAAACAATTTTTTCTCCACTGGTACTGATTCTGGGATTATTAGGATTTAGGACCAAGTCAATACTGATTCTTCGATTATTAGGATTTCTGACTAGGGGTGTGATGGTTTCTGTTCTTTTTATAATTTTCTCATTCCTCTAGTATGCGTATGTTCTTAATGAAAAATATGGGTTTGAGTTTCTTACAAAATGTGGAGATGCGGTTAATTTAAGTAAGTAGGGTGTACTGTTGAAGATGGGTTTGAATAATGGTGTTTTTAGGATCAAGAAATGCTGAAACCCCGTTATAAACTGCAAAAATAGATAGAAAAGGATCACATGATGATACTTTTAATTTTTCTATGAATGGCAAATTGAATTTTAGCAGTTTCTTGTTCTTGTGCACAAGACTAATCCCTAGGCCTTGTTAAATTTTTGGTTGCATTTTATTTGGCTGCTAATCTATAAAATCTATTTCTTGGGAGGTTGTTATGGGTGAGTGTAGTTCTTGAGATTGATGGGTCTCTTGTTCCATGTGTTCCATGCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCGTCAATGGGAGAGGAGCAGATCTGCGCTCTCAAGGACATAGGCCCAAAATAGTTCGTTCCCTTTGATTGATAAAAATACAGTTGCAGTATAAACTTAGAACGAACGAACCGATCGATGTCCAGATCATAGTCTATAATAGTCGTCTGAGAAGCCAGATTCGTTGATGATGCTTCATGGGCATATATCTCAATTAGTGGTTTCTTTTACTCTCTTCAGACCCTACAATTAATATTTATTTTTCTACTGCTATTCGTGTTTGAATTAAGAATCGGTTTTTTCTTTGCTAGTGTTTCTTTCGTCATTAAATCATGTAAACCTTTTCTAGCTGCTTTATGGTTTGTTTTAAGAGTTCGTAGGATAGAACCATGGTTTTTGAGGAGAAGTATAATATTTTTATTTACCAGTATAATATGGAGTTTCTTCTTAGTGTTCTTACTGCTCAATTTTTATGATTTCGTCGTGGGGCCTTCAGTCATATTCCGATGAAAGAAGATAGGAAAA

Coding sequence (CDS)

ATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAGCCATCCGCAAAAATGGATACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCATCTTCACACAATTGTGATGTTCCTCATGTCAGTCGTACTGACTACCAGCTCATTGATATCTCCGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACCGATGATGGTCTGCTGACCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCGTCAATGGGAGAGGAGCAGATCTGCGCTCTCAAGGACATAGGCCCAAAATAG

Protein sequence

MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTDDGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Homology
[Close]
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.1e-82
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAG IRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D LLTQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.3e-81
Identity = 145/159 (91.19%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAG IRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D LL+QIKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 9.0e-81
Identity = 141/159 (88.68%), Postives = 154/159 (96.86%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAG IRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           + LL+QIKDGFAEGKDL+V+VMS+MGEE+IC+LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match: Q945F4 (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-80
Identity = 142/159 (89.31%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAG IRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D LLTQIKDGFA+GKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-80
Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           + LL+ IKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 ENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. NCBI nr
Match: XP_004135157.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypothetical protein Csa_009020 [Cucumis sativus])

HSP 1 Score: 323 bits (827), Expect = 2.56e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. NCBI nr
Match: XP_038893432.1 (eukaryotic translation initiation factor 5A-4 [Benincasa hispida])

HSP 1 Score: 316 bits (809), Expect = 1.42e-108
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           + LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. NCBI nr
Match: XP_008446407.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034452.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK17682.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (808), Expect = 2.02e-108
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. NCBI nr
Match: XP_022734117.1 (eukaryotic translation initiation factor 5A-2 [Durio zibethinus] >KAB2624498.1 eukaryotic translation initiation factor 5A [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 311 bits (798), Expect = 6.77e-107
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LLTQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. NCBI nr
Match: XP_008360103.1 (eukaryotic translation initiation factor 5A-2 [Malus domestica] >XP_009356353.1 PREDICTED: eukaryotic translation initiation factor 5A-2 [Pyrus x bretschneideri] >RXH79509.1 hypothetical protein DVH24_040656 [Malus domestica])

HSP 1 Score: 311 bits (798), Expect = 6.77e-107
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LLTQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match: A0A0A0KU59 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G606480 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.24e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match: A0A5D3D1G5 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00070 PE=3 SV=1)

HSP 1 Score: 315 bits (808), Expect = 9.78e-109
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match: A0A1S3BFT8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1)

HSP 1 Score: 315 bits (808), Expect = 9.78e-109
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match: A0A498I9B2 (Eukaryotic translation initiation factor 5A OS=Malus domestica OX=3750 GN=DVH24_040656 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 3.28e-107
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LLTQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match: A0A5N5HA81 (Eukaryotic translation initiation factor 5A OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_016158 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 3.28e-107
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159
           D LLTQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

The following BLAST results are available for this feature:
BLAST of Cucsat.G9887 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P249222.1e-8291.82Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40... [more]
P563365.3e-8191.19Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI... [more]
Q9AXJ49.0e-8188.68Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV... [more]
Q945F41.5e-8089.31Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV... [more]
Q9AXQ42.6e-8090.57Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE... [more]
BLAST of Cucsat.G9887 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135157.12.56e-111100.00eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypo... [more]
XP_038893432.11.42e-10897.48eukaryotic translation initiation factor 5A-4 [Benincasa hispida][more]
XP_008446407.12.02e-10897.48PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034... [more]
XP_022734117.16.77e-10794.34eukaryotic translation initiation factor 5A-2 [Durio zibethinus] >KAB2624498.1 e... [more]
XP_008360103.16.77e-10794.34eukaryotic translation initiation factor 5A-2 [Malus domestica] >XP_009356353.1 ... [more]
BLAST of Cucsat.G9887 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU591.24e-111100.00Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G... [more]
A0A5D3D1G59.78e-10997.48Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BFT89.78e-10997.48Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489... [more]
A0A498I9B23.28e-10794.34Eukaryotic translation initiation factor 5A OS=Malus domestica OX=3750 GN=DVH24_... [more]
A0A5N5HA813.28e-10794.34Eukaryotic translation initiation factor 5A OS=Pyrus ussuriensis x Pyrus communi... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 85..141
e-value: 2.6E-8
score: 43.6
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 85..127
e-value: 1.5E-14
score: 53.8
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..85
e-value: 6.3E-44
score: 149.7
IPR001884Translation elongation factor IF5A-likePIRSFPIRSF003025Transl_init_eIF5Acoord: 1..135
e-value: 1.4E-55
score: 185.0
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 17..120
e-value: 8.8E-37
score: 123.8
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A FAMILY MEMBERcoord: 1..123
NoneNo IPR availableGENE3D2.40.50.140coord: 86..131
e-value: 7.8E-16
score: 59.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR11673:SF42BNAA07G09420D PROTEINcoord: 1..123
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 50..57
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 15..93
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 86..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9887.T1Cucsat.G9887.T1mRNA
Cucsat.G9887.T2Cucsat.G9887.T2mRNA
Cucsat.G9887.T3Cucsat.G9887.T3mRNA
Cucsat.G9887.T5Cucsat.G9887.T5mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006413 translational initiation
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding