Cucsat.G9885 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9885
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProtein of unknown function, DUF538
Locationctg1673: 1272812 .. 1274704 (+)
RNA-Seq ExpressionCucsat.G9885
SyntenyCucsat.G9885
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACATCAAAACCGCTAAAAAGTGAAAAACCCAAAAGATTAGCTCTTCGCTTTTTTAGAAATTTACCAAATTACCCTTTCCGATTCCATTTCACACTCCTCAACGCAAACAACAGCGCAGAACATTGAAGCGCCACAATTCACATTTGACAGTAGCGTCTTTGTCTTCTCCAAGCTGCTTCAGATTTATATGGGTGTGGCTCTCATTTTCTCCGTTACTCCCATTTCCCCATTTTCTTCTCTTGCCGCCGACCTCTAGACGAAGTTTAACGCCGGTCCCAGCTTCAAATATGGAGAAGGCTTTGACTAAGGTGGGCAGCTTAAAGGTTGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAACATCACTGATGATCTCAATGTGAGTTTTGTTGGGTTTGTTTCTGTTTTGTATTCCTTTGATTCTGGTTTTGGGTTTTTTTTTTTTTTTTTTGAGATTTGAGTAATGCAGTTTCACTTGGTTGTTATTAGTAGTGGATTTTGTGCTCATGTTTCTTTGTTTGTCGCTTACTGATAAGATTAAGGCTAGATCCGTTGGTTTTTTTCCATTAATTAGAGGATTTCACTGATAGGGTTACAATGGGAGTGGAAATGGACTGAAGGAGTCATTGTATCAGTTTGATTGAAAAAATAAATAAATATTGGGAGAAATTATTTTAAAAGTTCATATACTGTAGAATGACCTGGGGGTGGGGGGATACTGGAGGATGAGAATTGTGTTGATTGAACAAAATCTGTTTGGATATAACTTCATGATCTATTCAGGAGATGTTAACAGGGAATCTGTCTGTTAAAAGTGAGGAATTCTATTTTTGCAATGTTTCTGTCAAGGAGATGTTGACTGTCTAATATCAAATAGCGTCCTTGATGTTTACACTGGAAAAGCAGATTATATCTGGATGCTCATAACTTACTCAAGTGGATTGGCATTAGTTAAAACTCTGAGCTCCTTTCCATTTATGTATAGGCAAATATTAAACTTACACCTTGGTTTGAATCTCATATATGATATTGTTTGTGGCAGACTTTCTCAAATACTGTTGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGTGATCTCTTTGCACATTCTCTCCTTATATATATTAGACTAACTACATATTCAATACTGGGTTGATGGACAACGTTTGCTGTAATGTCCTGTTGCATTCTGTGGGAAGTGCAGACTTTTACATCACCTATTAACTCATGCTTTAGAGTCCATTAGTGATTTAACATGGTATCAAAGTAGGAGGTTTTGTATTCAAATATGTGCAATGGTATTTCTGATTTCTACTCGTTGAGTCTTCTACATATTTCAAGTCCACAAGTGATGAGGAAAGTGTAAAATGTTGGATGGTATTACATTAAATTTATCTTCACCCACTAGCTTAAACTTTAGGTCAATCGATGAGAACACCTTATGATTGTCTCTCATTTTTTGTATTAAGTTGTTAGAGATTTTCGTAAGCATATTATTGAAGAAAATCATAACCCAGAGTATTCAACATTTTTTTTTGCCTCCTACAGGAAAGCCATTGAAGAGCTTGCCGGATTTACTTCGCGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATGACCTGCTACGAATTTGATGAATCAAAGTCCAAGCTGATTGTATACTTACCATCTGCTTGTGAGATTAGTTTCAAGGATTCCTCTGTCGTCAGATATGCAACACGGGTAAAAGGAACTCTTCAGAGAGGAAAGCTTACAAACATCGAAGGAATGAAGACGAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGTCAGTCGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTAAAGAAATCAAGATCAAAAGATGCATATGAAAAGCCCCATGATGCCATTAGGGTAGGCGAATTCTAATATTCAAACTATGGCACATTGTTAGATGTCATTAAGGAGGCAGGTAAATGAATCCTGTGTTTACATAAGCTGCATTCTTCCATCTGCATTGTCCAAATATAGAAATCTGAATGTGTTATCCCCATTATATATATTGTTTGGATGAGTTTTGTAGATTCTCTGTTTTCTTTTTCTAGTCCAATGTTAAGTTCTCTCATGGAGTGGTGACAGAACCAGATGAACTATAAAATTTCATACTTCCCAACTTTTTTAGCTGAGCTGAACTTTCTGGAATTGAGGAAAAATGAAATAACAGAACGGATAGATTATGAAAAAACTAGTTGGGGGGGTAGGATTTGTGGTTTTTTTTGGGTTCCTTCTATTTCTTGTAAAAGTTAAATGATATGTTTGGTTAAAATTGGTGAGAATAAACCAAAAATTCTTATCTTTATGTTTTGCATAAAGTCTTGGAAGCTTTGGGAAGTATG

Coding sequence (CDS)

ATGGAGAAGGCTTTGACTAAGGTGGGCAGCTTAAAGGTTGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAACATCACTGATGATCTCAATACTTTCTCAAATACTGTTGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCTTGCCGGATTTACTTCGCGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATGACCTGCTACGAATTTGATGAATCAAAGTCCAAGCTGATTGTATACTTACCATCTGCTTGTGAGATTAGTTTCAAGGATTCCTCTGTCGTCAGATATGCAACACGGGTAAAAGGAACTCTTCAGAGAGGAAAGCTTACAAACATCGAAGGAATGAAGACGAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGTCAGTCGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTAAAGAAATCAAGATCAAAAGATGCATATGAAAAGCCCCATGATGCCATTAGGGTAGGCGAATTCTAA

Protein sequence

MEKALTKVGSLKVGSLWISKKAKEELANITDDLNTFSNTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Homology
[Close]
BLAST of Cucsat.G9885 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 57/101 (56.44%), Postives = 79/101 (78.22%), Query Frame = 0 

Query: 2   TCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWVK 61
           T YEFDE   KL V +PS CE+ +KDSSV+++ T V G L++GKLT++EG+KTKV++WVK
Sbjct: 73  TNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVMIWVK 132

Query: 62  VTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 103
           VTS+S +   + KV+FTAG+KKSRS+DAYE   + +RV +F
Sbjct: 133 VTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170

[Close]
BLAST of Cucsat.G9885 vs. NCBI nr
Match: XP_008446412.1 (PREDICTED: uncharacterized protein At5g01610-like isoform X2 [Cucumis melo])

HSP 1 Score: 207 bits (526), Expect = 2.91e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 71  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 130

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 131 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 172

[Close]
BLAST of Cucsat.G9885 vs. NCBI nr
Match: XP_004135158.1 (uncharacterized protein At5g01610 [Cucumis sativus] >KGN51959.1 hypothetical protein Csa_008250 [Cucumis sativus])

HSP 1 Score: 207 bits (526), Expect = 3.54e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cucsat.G9885 vs. NCBI nr
Match: XP_008446410.1 (PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo] >KAA0034454.1 uncharacterized protein E6C27_scaffold65G004620 [Cucumis melo var. makuwa] >TYK17680.1 uncharacterized protein E5676_scaffold1932G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (526), Expect = 3.54e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cucsat.G9885 vs. NCBI nr
Match: XP_038891837.1 (uncharacterized protein At5g01610 [Benincasa hispida])

HSP 1 Score: 198 bits (503), Expect = 1.13e-62
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVK TLQRGKLT+IEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKATLQRGKLTSIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDA+RV +F
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAVRVEDF 178

[Close]
BLAST of Cucsat.G9885 vs. NCBI nr
Match: XP_023543022.1 (uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190 bits (482), Expect = 1.77e-59
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           +TCYEFDESKSKLIVYLPS CEISFKDSSV+RYATRVKGTLQRGKLT IEGMKTKVLVWV
Sbjct: 77  ITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSV+VEGYKSDKVWFTAGVKKSRSKDAY+KP DA+RV  F
Sbjct: 137 KVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 178

[Close]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match: A0A1S3BFP4 (uncharacterized protein At5g01610-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489164 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.41e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 71  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 130

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 131 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 172

[Close]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match: A0A5A7STB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00050 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.72e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match: A0A0A0KSU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606500 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.72e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match: A0A1S3BF00 (uncharacterized protein At5g01610-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489164 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.72e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV
Sbjct: 77  MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF
Sbjct: 137 KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match: A0A6J1FZA7 (uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC111449282 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 3.48e-59
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 1   MTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRGKLTNIEGMKTKVLVWV 60
           +TCYEFDESKSKLIVYLPS CEISFKDSSV+RYATRVKGTLQRGKLT IEGMKTKVLVWV
Sbjct: 77  ITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTKVLVWV 136

Query: 61  KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 102
           KVTSV+VEGYKSDKVWFTAGVKKSRSKDAY+KP D +RV  F
Sbjct: 137 KVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDGVRVEAF 178

The following BLAST results are available for this feature:
BLAST of Cucsat.G9885 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M0151.4e-2656.44Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P... [more]
BLAST of Cucsat.G9885 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446412.12.91e-66100.00PREDICTED: uncharacterized protein At5g01610-like isoform X2 [Cucumis melo][more]
XP_004135158.13.54e-66100.00uncharacterized protein At5g01610 [Cucumis sativus] >KGN51959.1 hypothetical pro... [more]
XP_008446410.13.54e-66100.00PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo] >KAA... [more]
XP_038891837.11.13e-6295.10uncharacterized protein At5g01610 [Benincasa hispida][more]
XP_023543022.11.77e-5990.20uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G9885 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BFP41.41e-66100.00uncharacterized protein At5g01610-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A5A7STB81.72e-66100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KSU51.72e-66100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606500 PE=4 SV=1[more]
A0A1S3BF001.72e-66100.00uncharacterized protein At5g01610-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1FZA73.48e-5989.22uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availablePANTHERPTHR31676:SF142SUBFAMILY NOT NAMEDcoord: 3..178
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 61..167
e-value: 5.6E-30
score: 104.1
IPR007493Protein of unknown function DUF538PANTHERPTHR31676T31J12.3 PROTEIN-RELATEDcoord: 3..178
IPR036758At5g01610-like superfamilyGENE3D2.30.240.10coord: 37..178
e-value: 2.8E-47
score: 161.9
IPR036758At5g01610-like superfamilySUPERFAMILY141562At5g01610-likecoord: 12..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9885.T1Cucsat.G9885.T1mRNA
Cucsat.G9885.T2Cucsat.G9885.T2mRNA
Cucsat.G9885.T3Cucsat.G9885.T3mRNA